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Prevalence of severe acute respiratory syndrome Coronavirus 2 antibodies among market and city bus depot workers in Lima, PeruTovar, Marco, Peinado, Jesús, Palomino, Santiago, Llanos, Fernando, Ramírez, Claudio, Valderrama, Gisella, Calderón, Roger I., Williams, Roger B., Velásquez, Gustavo E., Mitnick, Carole D., Franke, Molly F., Lecca, Leonid 29 January 2022 (has links)
We report severe acute respiratory syndrome coronavirus 2 antibody positivity among market and city bus depot workers in Lima, Peru. Among 1285 vendors from 8 markets, prevalence ranged from 27% to 73%. Among 488 workers from 3 city bus depots, prevalence ranged from 11% to 47%. Self-reported symptoms were infrequent. / National Institute of Allergy and Infectious Diseases / Revisión por pares
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Are smokers more vulnerable considering disease severity inCOVID-19?Lund, Maja January 2020 (has links)
Background: COVID-19 is an ongoing pandemic. As of 11 May 2020, there are 4 013 728confirmed cases and 278 993 deaths. Smoking has been named as one possible factor regardingillness progression and severity. Aim: The aim of this systematic literature review is to examine if smokers are more at riskconsidering disease severity. Methods: This is a systematic literature study using the PubMed database. Inclusion andexclusion criteria were specified by using the PICOS format. Free text words and MeSH wordswere combined to create a search plan. The search was conducted twice, 26 April 2020 and 12May 2020. Full text articles were examined for eligibility by using inclusion and exclusioncriteria. An estimation of bias was conducted by using the MINORS criteria. Result: A total of seven articles were included. Of those, 5 reported a statistically significantrelationship between smoking and disease progression or death. Of these, 4 articles foundstatistical significance when correcting for confounders (hypertension, COPD, ischemic heartdisease, cardiac insufficiency). Conclusions: The result of this systematic literature review suggests that smoking enhancesthe severity of COVID-19. Due to the limited number of patients combined with a narrowgeographic area being studied, more research is needed to further evaluate and establish therelationship between smoking and COVID-19.
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Vergleich der Sensitivität und Spezifität von SARS-CoV¬-2 Nukleoprotein- und Spike-Protein-Elisa mit einem Elisa, der beide Proteine kombiniertReiners, Nina Ellen 07 February 2022 (has links)
SARS-CoV-2-Antikörpertests sind deswegen von Bedeutung, weil damit insbesondere die Ausbreitung des Virus exakt nachverfolgt und politische Maßnahmen und Einschränkungen angepasst werden können. Zum Antikörpernachweis werden hauptsächlich das Spike und das Nukleo-Protein als Fängerprotein verwendet. Ausgangspunkt für die vorliegenden Studie war die Beobachtung, dass Covid-positive Seren, die in S-Protein basierten Antikörpertests stark reagiert hatten, teilweise im N-Protein-Tests gar nicht reagierten und umgekehrt. Daraufhin stellte sich die Frage, wie sich die Kombination der Nukleo- und Spike-Proteine in einem Kombinations-Test, im Vergleich zu einem Test mit dem Nukleo-Protein und dem Spike-Protein allein, auf die Sensitivität und Spezifität auswirkt.
So entstand die Idee, die beiden Proteine in einem gemeinsamen Test zu kombinieren, um einerseits die Sensitivität zu verbessern, ohne aber gleichzeitig eine Verschlechterung der Spezifität in Kauf nehmen zu müssen. Um diese Arbeitshypothese optimal untersuchen zu können, wurde ein eigener S-Protein-ELISA und ein Kombinatios-ELISA, der das Spike und das Nukleo-Protein als Fängerprotein benutzt, etabliert und mit dem bereits von Frau Schnurra etablierten N-Protein-ELISA verglichen. Untersucht wurde die Hypothese mithilfe der drei ELISA-Antikörpertests, in denen 123 Covidseren von 2020 und 180 Blutbankseren und Plasmen von vor 2019 miteinander verglichen wurden. Der N-Protein-ELISA, der S-Protein-ELISA und der Kombinations-ELISA folgten dabei einem fast identischen Protokoll. Somit wurde garantiert, dass ausschließlich die Auswirkung der Proteine und Proteinkombinationen verglichen wurden und Sensitivitäten und Spezifitäten nicht wegen verschiedener Testqualitäten oder verwendeter Substanzen schwankten.
Um den optimalen Vergleich der ELISA ermöglichen zu können, wurde die Spezifität der drei Tests mithilfe der ROC-Analyse auf 98,33 % angeglichen. Im Vergleich der Sensitivitäten der drei Tests ist zu sehen, dass die Sensitivität tatsächlich gesteigert werden kann, wenn das S- und das N-Protein miteinander kombiniert werden. Der N-Protein-ELISA hat mit 82,9 % (CI: 75,1% - 89,1%) die geringste Sensitivität, gefolgt von dem S-Protein-ELISA mit 93,5 % (CI: 87,6% - 97,2%). Die höchste Sensitivität hat der ELISA, der die beiden Proteine kombiniert mit 95,9 % (CI 90,8% - 98,7%). Werden die AUC‘s der drei Tests berechnet, die die Genauigkeit eines Tests angeben, wie zum Beispiel die Unterscheidung der diagnostischen Gruppe in krank und gesund, schneidet auch hier der Kombinationstest mit 0,986 (CI: 0,965 – 0,996) am besten ab. Auf dem zweiten Platz landet der S-Protein-ELISA mit 0,985 (CI: 0,964- 0,995) und auf dem dritten Platz der N-Protein-ELISA mit 0,96 (CI: 0,931 – 0,979).
Wird die Spezifität der drei Tests bei einem Cut-off von 1 miteinander verglichen, ist deutlich, dass sich die Spezifität durch die Kombination der beiden Proteine verschlechtert. Von 180 Seren und Plasmen, die vor 2019 abgenommen wurden, wird im N-Protein-ELISA ein Serum als falsch positiv erkannt, im S-Protein-ELISA ein Serum und ein Plasma. Im Kombinations-ELISA werden jeweils die beiden zuvor genannten Seren und das Plasma als falsch positiv erkannt. Eine zusätzliche Überprüfung ist hierbei erforderlich, indem noch mehr Covid-negative Seren untersucht werden.
Zur praktischen Nutzung der Ergebnisse kommen folgende Möglichkeiten in Frage: Wird ein besonders sensitiver Test benötigt, wie es zum Beispiel der Fall ist, wenn eine große Bevölkerung auf ihre Durchseuchung untersuchen werden soll, könnte ein ELISA benutzt werden, der beide Proteine kombiniert. Anschließend müssten die positiven Seren in einem hoch spezifischen Test, wie zum Beispiel dem Siemens-Test, nachgetestet werden. Das hätte den Vorteil, dass mit einem relativ günstigen ELISA die größte Anzahl an Seren aussortiert werden könnte. Daraufhin müsste dann nur noch eine kleine Gruppe an Seren mit dem teureren Antikörpertest, in diesem Falle dem Siemens-Test, nachgetestet werden. Wird primär ein besonders spezifischer ELISA benötigt, könnte das N-Protein wieder allein verwendet werden.
:Inhaltsverzeichnis
ABKÜRZUNGSVERZEICHNIS III
1 EINFÜHRUNG 1
1.1 Besonderheiten des SARS-Coronavirus-2 1
1.1.1 Aufbau des SARS-CoV-2 3
1.1.2 Antikörperantwort auf SARS-CoV-2 5
1.2 SARS-CoV-2 Diagnostik 7
1.2.1 SARS-CoV-2 Akutdiagnostik/ Direkter Erregernachweis 8
1.2.2 SARS-CoV-2-Antikörpertests/ Indirekter Erregernachweis 9
1.2.2.1 Die Bedeutung von SARS-CoV-2 Antikörpertests 10
1.3 Aufgabenstellung 11
2 MATERIAL UND METHODEN 12
2.1 Materialien 12
2.1.1 Blutproben 12
2.1.2 Herstellung des RBD-Bestandteils des S1-Proteins 12
2.2 Methoden 13
2.2.1 Allgemeines ELISA-Protokoll 13
2.2.2 Datenanalyse 14
3 ERGEBNISSE 15
3.1 Entwicklung des ELISA-Protokolls 15
3.1.1 Antigenbeschichtungslösung 15
3.1.2 Antigenbeschichtungskonzentration 16
3.1.3 Vergleich verschiedener Entwicklungszeiten 19
3.1.4 Versuch der Reduktion falsch positiver Ergebnisse 24
3.1.5 Herstellung des Calibrators 29
3.1.6 Herstellung des Standardserums 32
3.1.7 Finales Elisa Protokoll 36
3.2 Stabilisierung des ELISAs 36
3.2.1 Stabilisierung der Beschichtung 36
3.2.2 Stabilisierung von Positiv-/ Negativkontrolle und Calibrator 39
3.3 Vergleich der Sensitivitäten und Spezifitäten der verschiedenen ELISA 39
3.3.1 Sensitivitäten der Antikörpertests bei einem Cut-off von 1 40
3.3.1.1 Aufschlüsselung der Testergebnisse der Sensitivität 42
3.3.2 Spezifitäten der Antikörpertests 43
3.3.2.1 Aufschlüsselung der Testergebnisse der Spezifität 44
3.3.3 Angleichung der Spezifität zum Vergleich der drei ELISA 45
3.3.3.1 Angleichung der Spezifität auf 99,4% 45
3.3.3.2 Angleichung der Spezifität auf 98,3 % 47
3.4 Vergleich der Flächen unter den ROC-Kurven 50
4 DISKUSSION 51
5 ZUSAMMENFASSUNG DER ARBEIT 58
6 LITERATURVERZEICHNIS 61
7 ANHANG 68
8 ERKLÄRUNG ÜBER DIE EIGENSTÄNDIGE ABFASSUNG DER ARBEIT 69
9 LEBENSLAUF 70
10 PUBLIKATIONEN 71
11 DANKSAGUNG 72
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Sociodemographic Predictors Associated with the Willingness to Get Vaccinated against COVID-19 in Peru: A Cross-Sectional SurveyVizcardo, David, Salvador, Linder Figueroa, Nole-Vara, Arian, Dávila, Karen Pizarro, Alvarez-Risco, Aldo, Yáñez, Jaime A., Mejia, Christian R. 01 January 2022 (has links)
During the race for the development of a vaccine against COVID-19, even before its commercialization, part of the population has already shown a growing fear of its application. We designed an analytical cross-sectional study using an anonymous survey in the 25 departments of Peru. We surveyed whether the participants were planning on getting vaccinated, as well as other characteristics that were cross-checked in a uni-, bi-and multivariate manner. Of the 1776 respondents, 70% (1251) stated that they were planning to be vaccinated, 20% (346) did not know yet or doubted it, and 10% (179) did not want to be vaccinated. We observed that those who did not get infected with COVID-19 exhibited a higher frequency to not wanting or were uncertain about getting vaccinated (aPR: 1.40; 95% CI: 1.09–1.81; p-value = 0.008). In contrast, there was a lower frequency of vaccine refusal among university students (aPR: 0.75; 95% CI: 0.61–0.92; p-value = 0.005) and healthcare workers (aPR: 0.59; 95% CI: 0.44–0.80; p-value = 0.001); adjusted by place of residence. There is still an important percentage of respondents who do not want to be vaccinated or are hesitant to do it, which was associated with educational level, being a healthcare worker and if they were previously infected with COVID-19. Our results could offer useful information about COVID-19 vaccination campaigns. / Revisión por pares
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Unlocking SARS-CoV-2 detection in low- and middle-income countriesAlcántara, Roberto, Peñaranda, Katherin, Mendoza-Rojas, Gabriel, Nakamoto, Jose A., Martins-Luna, Johanna, del Valle-Mendoza, Juana, Adaui, Vanessa, Milón, Pohl 22 November 2021 (has links)
Low- and middle-income countries (LMICs) are significantly affected by SARS-CoV-2, partially due to their limited capacity for local production and implementation of molecular testing. Here, we provide detailed methods and validation of a molecular toolkit that can be readily produced and deployed using laboratory equipment available in LMICs. Our results show that lab-scale production of enzymes and nucleic acids can supply over 50,000 tests per production batch. The optimized one-step RT-PCR coupled to CRISPR-Cas12a-mediated detection showed a limit of detection of 102 ge/μL in a turnaround time of 2 h. The clinical validation indicated an overall sensitivity of 80%–88%, while for middle and high viral load samples (Cq ≤ 31) the sensitivity was 92%–100%. The specificity was 96%–100% regardless of viral load. Furthermore, we show that the toolkit can be used with the mobile laboratory Bento Lab, potentially enabling LMICs to implement detection services in unattended remote regions. / Fondo Nacional de Desarrollo Científico, Tecnológico y de Innovación Tecnológica / Revisión por pares
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Ambulanssjuksköterskans upplevelser av hur vårdandet av patienten påverkas under COVID-19 pandemin : En kvalitativ intervjustudieGerle, Anna, Jahic, Belma January 2021 (has links)
Bakgrund och problemformulering: Första fallet av SARS-Co-2 rapporterades i Kina i slutet på år 2019 och tidigt år 2020 förklarades smittspridningen av viruset vara en pandemi. I frontlinjen av pandemin finns ambulanssjuksköterskan som dagligen möts av utmaningarna som pandemin innebär. Det går inte att med säkerhet fastställa vilka patienter som bär på viruset vilket innebär att samtliga patienter måste betraktas som potentiella smittbärare. Ambulanssjuksköterskan arbetar nära patienten och ofta i trånga utrymmen vilket innebär en ökad risk för smittspridning. Syfte: Syftet med studien var att beskriva ambulanssjuksköterskans upplevelser av hur vårdandet av patienten påverkas under COVID-19 pandemin. Metod: För att besvara syftet genomfördes en intervjustudie med induktiv innehållsanalys. Urvalet innefattade sex ambulanssjuksköterskor. Resultat: Ambulanssjuksköterskorna beskrev att skyddsutrustningen har påverkat vårdandet genom att vården fördröjs, kommunikationen försvåras samt att vårdarbetet försvåras. Hygienrutinerna har ändrats och vården av patienterna påverkas i dels bedömning och behandling, dels i handläggningen av patienterna. Okunskap gällande det nya viruset skapade en osäkerhet. Resultatet påvisar även en rädsla för att bli smittade hos ambulanssjuksköterskorna. Diskussion och slutsats: COVID-19 pandemin har påverkat det prehospitala vårdandet av patienten på flera sätt. Ambulanssjuksköterskorna upplevde att informationen och rutinerna gällande vården under pandemin var bristfällig vilket stämde överens med annan befintlig forskning. Upplevelsen av fysiska hinder och kommunikationssvårigheter som förekom under användning av skyddsutrustning var fynd som framkom även i tidigare forskning och slutsatsen gjordes att COVID-19 pandemin komplicerat vårdande av patienterna prehospitalt. Ökad beredskap inför framtida kriser och utveckling av skyddsutrustningen för att minska negativ påverkan på vårdarbetet är förslag på förbättringsarbete.
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Clinical and epidemiological characteristics of children with sars-cov-2 infection admitted to a peruvian hospitalRodríguez-Portilla, Ricardo, Llaque-Quiroz, Patricia, Guerra-Ríos, Claudia, Cieza-Yamunaqué, Liliana Paola, Coila-Paricahua, Edgar Juan, Baique-Sánchez, Pedro Michael, Pinedo-Torres, Isabel 01 April 2021 (has links)
We carried out an observational, retrospective and descriptive study in order to identify the clinical and epidemiological characteristics of children with SARS-CoV-2 infection admitted to a Peruvian national referral hospital. We included patients from one month old to fourteen years old hospitalized between March and August 2020. A total of 125 patients with SARS-CoV-2 infection were admitted, 18.4% (n = 23) had critical illness and 16.8% (n = 21) had multisystem inflammatory syndrome (MIS-C). The absence of comorbidities and previous history of epidemiological contact were more frequent in patients with MIS-C. Patients in critical condition and patients with MIS-C had lower lymphocyte and platelet counts, and higher C-reactive protein, ferritin and D-dimer values than patients who did not have said conditions. Six (4.8%) out of 125 children died, as well as 3 (13%) children from the group of patients in critical condition. None of the children with MIS-C died. / Revisión por pares
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Nutritional Implications in SARS-CoV-2Daff, Kaitlyn M. 06 August 2020 (has links)
No description available.
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Blood Type Effect on COVID-19 Infection And Tooth MovementLerman, Avigael, 0000-0003-1721-4294 January 2022 (has links)
Introduction: The objective of this study was to explore the influence of ABO blood type on COVID-19 infection rate. Discovered relationships may uncover whether genetic makeup may affect treatments and such information could be related to orthodontic tooth movements.
Methods: The PubMed database was searched using the terms: ABO Blood Group System; Blood-Group System, ABO; System, ABO Blood-Group; H Blood Group System; H Blood Group; Blood Group, H; ABH Blood Group; Blood Group, ABH; Blood Group H Type 1 Antigen; ABO Factors; Factors, ABO. Also included, were studies of ABO blood type and COVID infection or outcomes. Opinion pieces, animal studies, in-vitro studies, studies using blood other than ABO, and pre-2000 papers were excluded, as were studies that were not published in or translated to English. Of the included studies, the references were manually screened to identify additional qualified studies. Two independent reviewers reviewed the initial batch of reports to select the appropriate publications. To resolve conflicts, they met to discuss for a consensus. Studies were appraised by the Joanna Briggs Institute appraisal index. For the meta-analysis, studies which used odds ratio in their statistical analysis and COVID-19 infection as an outcome were included. Outcomes were analyzed using Forest Plots.
Results: Overall, this systematic review included 39 studies. 19 studies were cohort (2 prospective and 17 retrospective), 16 retrospective case control, and 4 were systematic reviews or meta-analysis. 31 studies reported a relationship between ABO blood type and COVID infection rates and 5 studies found no relationship. For the meta-analysis, 13 studies were included and analyzed. The estimated frequency of COVID-19 infection in terms of ABO blood groups and the overall effect size between blood groups was calculated with 95% confidence interval. The effect size of COVID-19 infection for blood group O versus the other blood groups was estimated as 0.174 (95% CI, o.o86-0.261) p<0.001. The effect size of COVID-19 infection for blood group A versus non-A was estimated as -0.174 (95% CI, -o.248- -0.100) p<0.001. The effect size of COVID-19 infection for blood group B versus non-B was estimated as -0.010 (95% CI, -0.107-0.086) p=0.831. The effect size of COVID-19 infection for blood group AB versus non-AB was estimated as -0.140 (95% CI, -o.344-0.064) p=0.179.
Conclusion: This meta-analysis indicates individuals with type O blood may be less susceptible to COVID-19 infection while those with type A blood may be more susceptible. Numerous studies, however, were not methodologically strong, as they had small sample size or suffered selection bias. Furthermore, no randomized controlled trials to determine causal relationships were found. Clearly this is understandable, given the speed with which the studies needed to be published. Despite such limitation, these findings have important implications for orthodontics because it may indicate that those with variants of Type A blood are more prone to inflammation, as orthodontic tooth movement is facilitated by the inflammatory responses of periodontal tissues. / Oral Biology
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Construction of the Social Distance Scale and the Relationship Between Trait Empathy and Social DistancingPrachthauser, Michaela 01 January 2021 (has links)
This paper describes the development of a brief self-report screening measure of adherence to social distancing and self-protective behaviors in pandemic situations. It provides initial statistical evaluations of correlations between social distancing behaviors and two trait measures (social desirability and trait empathy). Items measures were designed to quantify behaviors recommended by the CDC as primary strategies to prevent and reduce the spread of the COVID-19 infection. An item pool of 29 questions was generated with the aim of estimating the frequency of specific behaviors and were written to avoid confounding the description of behavioral actions with evaluative judgements. Responses were collected from 401 young adults using an anonymous online survey. An Exploratory Factor Analysis was conducted with the purpose of item reduction and subscale development. A 14-item Social Distance Scale (SDS) emerged, consisting of 4-subscales: Isolation from Community (IC), Work from Home (WH), Family Contact (FC), and Protective Behaviors (PB). The initial psychometric evaluation of the scales indicated adequate internal consistency and test-retest reliability. The Social Distance Scale is a promising new instrument which may be applied at the population or individual level. It may be used in conjunction with COVID-19 testing to measure interactions between social distancing factors and transmission. In addition, a reliable screening measure has utility for health service providers to assess patient risk and to provide education/counseling.
A secondary purpose of this research was to examine the relationship between trait empathy and social distancing. A MANCOVA was performed using the four subscales of the SDS v.1 with Empathy Group and Gender Group as fixed factors and the Socially Desirable Response Set (SDRS-5) as a covariate. The SDRS-5 was found to be a significant covariate for both the IC and PB subscales of the SDS v.1 , where higher levels of socially desirable responding lead to higher scores on IC and PB. It was hypothesized that participants high in self-reported trait empathy would demonstrate higher levels of social distancing. Indeed it was found that a significant main effect for Empathy Group emerged, where Empathy Group was significantly related to IC, WH, and PB. In line with expectations, participants in the High Empathy Group scored higher on these three dimensions of social distancing than those in the Low Empathy Group. A significant main effect for Gender Group was obtained for PB. Women were found to be significantly more likely to engage in protective behaviors such as hand washing, mask wearing, and maintaining 6 feet of distance than men.
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