Unter Spikelets versteht man kleine Depolarisationen mit einer Spike-ähnlichen Wellenform, die man in intrazellulären Ableitungen von verschiedenen Neuronentypen messen kann. In kortikalen Pyramidenzellen wurde ausgeprägte Spikelet-Aktivität nachgewiesen, die erheblich das Membranpotential beeinflussen kann (Crochet et al., 2004; Epsztein et al., 2010; Chorev and Brecht, 2012). Nichtsdestotrotz bleibt der Ursprung von Spikelets in diesen Neuronen unbekannt. In der vorgelegten Arbeit nutzte ich theoretische Modellierung um die Mechanismen von Spikelet-Erzeugung in Pyramidenzellen zu untersuchen. Zuerst sah ich die verschiedenen Hypothesen über den Ursprung von Spikelets durch. In der Literatur entdeckte ich zwei verschiedene Typen von Spikelets. Diese Arbeit konzentriert sich auf den häufiger vorkommenden Typ von Spikelets, welcher durch relativ große Amplituden gekennzeichnet ist. Die Eigenschaften dieser Spikelets passen am besten zu einem axonal Erzeugungsmechanismus. Im zweiten Kapitel widmete ich mich der Hypothese, dass somatische Spikelets axonalen Ursprungs mit somato-dendritischen Inputs hervorgerufen werden können. Ich identifizierte Bedingungen, die es erlauben ein Aktionspotential (AP) am Initialsegment vom Axon (AIS) zu initiieren, welches sich entlang des Axons ausbreitet, aber kein AP im Soma auslöst. Schließlich simulierte ich extrazelluläre Wellenformen von APs und Spikelets und verglich sie mit experimentellen Daten (Chorev and Brecht, 2012). Dieser Vergleich zeigte auf, dass die extrazellulären Wellenformen von Spikelets, die innerhalb einer Zellen am AIS erzeugt werden, gut zu den Daten passen. Zusammenfassend unterstützen meine Ergebnisse die Hypothese, dass Spikelets in Pyramidenzellen am AIS entstehen. Dieser Mechanismus könnte ein Mittel zum Energiesparen bei der Erzeugung von Output-APs sein. Außerdem könnte dadurch die dendritische Plastizität, die auf der Rückwärtspropagierung von APs beruht, reguliert werden. / Spikelets are transient spike-like depolarizations of small amplitudes that can be measured in somatic intracellular recordings of many neuron types. Pronounced spikelet activity has been demonstrated in cortical pyramidal neurons in vivo (Crochet et al., 2004; Epsztein et al., 2010; Chorev and Brecht, 2012), influencing membrane voltage dynamics including action potential initiation. Nevertheless, the origin of spikelets in these neurons remains elusive. In thi thesis, I used computational modeling to examine the mechanisms of spikelet generation in pyramidal neurons. First, I reviewed the hypotheses previously suggested to explain spikelet origin. I discovered two qualitatively different spikelet types described in the experimental literature. This thesis focuses on the more commonly reported spikelet type, characterized by relatively large amplitudes of up to 20 mV. I found that the properties of these spikelets fit best to an axonal generation mechanism. Second, I explored the hypothesis that somatic spikelets of axonal origin can be evoked with somato-dendritic inputs. I identified the conditions allowing these orthodromic inputs to trigger an action potential at the axon initial segment, which propagates along the axon to the postsynaptic targets, but fails to elicit an action potential in the soma and the dendrites. Third, I simulated extracellular waveforms of action potentials and spikelets and compared them to experimental data (Chorev and Brecht, 2012). This comparison demonstrated that the extracellular waveforms of single-cell spikelets of axonal origin are consistent with the data. Together, my results suggest that spikelets in pyramidal neurons might originate at the axon initial segment within a single cell. Such a mechanism might be a way of reducing the energetic costs associated with the generation of output action potentials. Moreover, it might allow to control the dendritic plasticity by backpropagating action potentials.

Les applications thérapeutiques de la neurostimulation ultrasonore représentent un terrain de recherche très prometteur, auquel il fait défaut un modèle valide décrivant les biomécanismes sous-jacents. Le premier objectif de ce travail de thèse était de proposer un modèle nerveux propice à une étude mécanistique du phénomène de neurostimulation ultrasonore. L’objectif suivant était de prouver l’intérêt d’exploiter ce modèle pour recueillir des informations concernant les interactions biophysiques ayant lieu entre les ultrasons (US) focalisés et le système nerveux. La majorité des études réalisées a porté sur le système nerveux du ver de terre commun, Lumbricus terrestris. Elles ont consisté d’une part à comparer entre elles les caractéristiques temporelles des réponses nerveuses associées à différentes modalités de stimulation, et d’autre part à évaluer l’influence de chacun des paramètres acoustiques du stimulus ultrasonore sur le taux de succès de neurostimulation (NSR). Dans les deux cas, la méthodologie suivie reposait sur l’administration de différents stimuli aléatoirement alternés. Complémentairement, le rôle joué par la cavitation acoustique a été étudié. La faisabilité de la stimulation du système nerveux du ver de terre, au moyen d’US et dans des conditions in vivo, a été prouvée. Les aires sensorielles et la dynamique de réponses associées aux trois modalités de stimulation ont été caractérisées. Il a été conclu que, dans ce modèle nerveux invertébré, pendant le phénomène de neurostimulation ultrasonore, les structures nerveuses interagissant fonctionnellement avec les US sont les nerfs afférents segmentaux. Les résultats des études paramétriques ont indiqué que le NSR augmente avec l’intensité acoustique, la durée de pulse et la fréquence de répétition des pulses. Il a été proposé que la structure nerveuse visée est sensible à la « force de radiation moyenne » transportée par le stimulus US, indépendamment des paramètres menant à cette valeur / Ultrasound neurostimulation applied to therapy is a promising field of research but still lacks of a validated model explaining the biomechanisms underlying the phenomenon. The first objective of this PhD thesis was to propose a nervous model suited for a mechanistic study of the phenomenon of ultrasound neurostimulation. In a second time, it was intended to practically prove the interest of this model by using it to gain knowledge regarding the biophysical interactions between focused ultrasound and the nervous system. Studies were performed on the nervous system of the anesthetized earthworm, Lumbricus terrestris. They consisted in either comparing the timings of the nervous responses associated with different modalities of stimulation, or evaluating the influence of each acoustic parameter on the neurostimulation success rate (NSR). In both cases, the methodology followed was to administer randomly mixed sequences of different stimuli. The feasibility of the in vivo activation of the anesthetized earthworm’s nervous system was proven. The sensory fields and response dynamics associated with the three modalities of stimulation were characterized. The parametric studies indicated that the NSR increases with pulse amplitude, pulse duration, pulse repetition frequency, but is more weakly influenced by the harmonic content and number of pulses. By applying a causal approach to interpret the results, we concluded that, in this nervous model, during the phenomenon of ultrasound neurostimulation, the structures functionally responding to the ultrasound stimulus are the segmental afferent nerves. We hypothesize that the main interaction with the axonal regions is mediated by ultrasound radiation force, without excluding the involvement of other biomechanisms

Drosophila es un modelo versátil para entender las bases genéticas de la señalización celular. En particular, el ojo compuesto de Drosophila proporciona un tejido ideal para estudiar los mecanismos de integración de señales que dirigen la formación de la red de neuronas fotorreceptoras. La vía de Ras/MAPK está involucrada en la determinación de todos los fotorreceptores, pero es particularmente necesaria para la especificación del fotorreceptor R7, ya que su ausencia determina la transformación del R7 en una célula no neural. De manera que durante el desarrollo del ojo, Ras media la decisión entre la diferenciación neural y no neural. Sin embargo, se desconoce el perfil de genes activados por Ras. Con el objetivo de describir este perfil, hemos realizado microarrays comparando diferentes alelos del receptor tirosina quinasa Sevenless (Sev) que participa en la especificación del R7 mediante la activación de la vía de Ras / MAPK. Uno de los genes que responden a la activación de Sev es el gen amyloid protein precursor-like (Appl). El incremento de la expresión de Appl detectado en los microarrays, también se confirmó por hibridación in situ. En un estudio detallado de localización de la proteína, observamos que aunque está presente en todos los fotorreceptores, hay más proteína Appl en R7 y R8, que en los otros. Para evaluar si Ras es necesario para la activación de Appl, realizamos clones con el alelo dominante negativo del gen Epithermal Growth factor Receptor (DERDN). En estos clones no se detectó Appl, mientras que los clones del alelo constitutivamente activo de Ras; RasV12 dieron lugar a la sobreexpresión de Appl. En cualquier otro tejido, RasV12 no produjo expresión ectópica, indicando que Ras es necesario y suficiente para la expresión de Appl aunque esta regulación es dependiente del dominio del ojo. Para ver si el factor de transcripción de la vía; Pnt, es capaz de unirse a Appl para activar su expresión realizamos clones con el alelo de pérdida de función pntΔ88. Estos clones mostraron que la falta de pnt tiene como resultado la ausencia de Appl. En segundo lugar evaluamos la posible unión directa de Pnt a Appl mediante transgénicos de regiones supuestamente enhancers de Appl unido a un promotor mínimo y al gen reportero lacZ. Ninguna de las construcciones fue capaz de dirigir la expresión de lacZ en ojo, sin embargo dos de ellas fueron capaces de dirigirla en cerebro, sugiriendo que estas dos secuencias actúan como unidades reguladoras de la expresión de Appl. Ya que no produjeron expresión en ojo, decidimos sensibilizar la respuesta de las construcciones a Ras, incrementando la actividad de la vía mediante clones RasV12. En este nuevo contexto, los dos ETS que tenían expresión en cerebro, fueron capaces de dirigir la expresión de lacZ. Además la unión de pnt a Appl se confirmó mediante experimentos de InmunoPrecipitación de la Cromatina (CHIP). Ras en ojo es responsable de la determinación de casi todos los fotorreceptores, sin embargo observamos que mientras que la determinación no está afectada en mutantes Appld, sí lo está el funcionamiento del R7. Este fotorreceptor es el único capaz de ver la luz ultravioleta. Mediante experimentos de comportamiento observamos que las moscas Appld tienen disminuida la capacidad de discernir la luz UV. Esta reducción es debida en parte porque el 2% de los axones de R7 de moscas Appld no llegan a hacer la sinapsis. Para tratar de incrementar los efectos observados y poder describir con mayor claridad la función de Appl en ojo, testamos la habilidad de los mutantes Appld de discernir el UV, en combinación con mutantes heterocigotos de proteínas descritas en el proceso de guía de axones. La perdida de función de Appl combinada con el mutante heterocigoto del gen neurotactina (nrt), produjo un claro deterioro de la capacidad del R7 para discernir UV y de los axones pare llegar a hacer la sinapsis demostrando que Appl es necesario para la correcta función del R7. / In a genome wide expression profile search for genes that characterize the Drosophila R7 photoreceptor specification we found Appl, the ortholog of human APP and a key factor in the pathogenesis of Alzheimer’s disease. We analyzed Appl expression in the eye imaginal disc and found that is highly accumulated in R7 photoreceptor cells. The R7 photoreceptor is responsible for UV light detection. To explore the link between high expression of Appl and R7 function, we have analyzed Appl null mutants and found reduced preference for UV light, likely due to mistargeted R7 axons. Moreover, axon mistargeting and inappropriate light discrimination are enhanced in combination with neurotactin mutants. R7 differentiation is triggered by the inductive interaction between R8 and R7 precursors, which results in a burst of Ras1/MAPK activated by the tyrosine kinase receptor Sevenless. Thus, we have studied whether Ras1/MAPK is responsible for the high Appl expression. Inhibition of Ras1 signaling leads to reduced Appl expression, whereas constitutive activation drives ectopic Appl expression. We show that Appl is directly regulated by the Ras/MAPK pathway through a mechanism mediated by PntP2, an ETS transcription factor that specifically binds ETS sites in the Appl regulatory region. Also, the zebrafish appb expression increased after ectopic fgfr activation in the neural tube of zebrafish embryos, suggesting a conserved regulatory mechanism.

No description available.

Retinal ganglion cell (RGC) axon arbors within the optic tectum are refined in development through a dynamic process of activity-dependent remodeling. The synaptic adhesion molecule N-cadherin is a candidate for mediating selective stabilization and elaboration of RGC axons due to its localization to perisynaptic sites and its modifiability by neural activity. RGCs of Xenopus tadpoles were co-transfected with plasmids encoding a dominant negative N-cadherin (N-cadDeltaE) and eGFP or eYFP. Using two-photon in vivo time-lapse imaging, we found that axons expressing N-cadDeltaE became less elaborate than controls over three days of daily live imaging. Shorter interval time-lapse imaging of axons expressing synaptophysin-GFP to visualize putative synaptic sites revealed that N-cadDeltaE expressing axons form fewer stable branches than controls and that stabilization of axonal branches at synaptic sites is altered. We conclude that N-cadherin participates in the stabilization of axonal branches in the Xenopus retinotectal system.

The control of cellular tyrosine phosphorylation levels is of great importance in many biological systems. Among the kinases and phosphatases that modulate these levels, the LAR-RPTPs have been suggested to act in several key aspects of neural development, and in a dysfunctional manner in various pathologies from diabetes to cancer. The aim of this thesis is to describe the physiological functions of one of the members of this subfamily of RPTPs, namely RPTPsigma. First, we showed that glucose homeostasis is altered in RPTPsigma null mice. They are hypoglycemic and more sensitive to exogenous insulin and we proposed that the insulin hypersensitivity observed in RPTPsigma-null mice is likely secondary to their neuroendocrine dysplasia and GH/IGF-1 deficiency. In addition to regulating nervous system development, RPTPsigma was previously shown to regulate axonal regeneration after injury. In the absence of RPTPsigma, axonal regeneration in the sciatic, facial and optical nerves was enhanced following nerve crush. However, myelin-associated growth inhibitory proteins and components of the glial scar such as CSPGs (chondroitin sulfate proteoglycans) have long been known to inhibit axonal regeneration in the CNS, making spinal cord injury irreversible. In collaboration with Dr Samuel David, we unveiled that RPTPsigma null mice are able to regenerate their corticospinal tract following spinal cord hemisections as opposed to their WT littermates. We then isolated primary neurons from both sets of animals and found that the absence of RPTPsigma promotes the ability of the neurons to adhere to certain inhibitory substrates. Finally, in order to better understand the physiological role of RPTPsigma, we used a yeast substrate-trapping approach, to screen a murine embryonic library for new substrates. This screen identified the RhoGAP p250GAP as a new substrate, suggesting a downstream role for RPTPsigma in RhoGTPase signaling. We also identified p130Cas and Fyn as new binding partners. All these proteins have clear functional links to neurite extension. The characterization of RPTPsigma and its signaling partners is essential for understanding its role in neurological development and may one day translate into treatments of neural diseases and injuries.

The objective of this thesis is to provide a complete pipeline that achieves an accurate reconstruction of the white matter fascicles using clinical diffusion images characterized by a low angular resolution. This involves (i) a diffusion model inferred in each voxel from the diffusion images and (ii) a tractography algorithm fed with these local models to perform the actual reconstruction of fascicles. Our contribution in diffusion modeling is a new statistical distribution, the properties of which are extensively studied. We model the diffusion as a mixture of such distributions, for which we design a model selection tool that estimates the number of mixture components. We show that the model can be accurately estimated from single shell low angular resolution diffusion images and that it provides specific biomarkers for studying tumors. Our contribution in tractography is an algorithm that approximates the distribution of fascicles emanating from a seed voxel. We achieve that by means of a particle filter better adapted to multi-modal distributions than the traditional filters. To demonstrate the clinical applicability of our tools, we participated to all three editions of the MICCAI DTI Tractography challenge aiming at reconstructing the cortico-spinal tract from single-shell low angular and low spatial resolution diffusion images. Results show that our pipeline provides a reconstruction of the full extent of the CST.

[Truncated abstract] Developmentally, the rodent retinocollicular projection is often thought of as a homogenous projection of retinal ganglion cell (RGC) axons, however the extensive period of RGC neurogenesis and sequential arrival of their axons into central targets such as the superior colliulus (SC) suggests otherwise. RGC axons are already present in the developing SC at embryonic (E) day 16.5-17. RGCs born on E15 have innervated the SC by birth, whereas axons derived from RGCs that are born last (E19) do not grow into the SC until postnatal (P) days 4-6 (Dallimore et al., 2002). These observations may go someway to explaining why, after SC lesions in rats at P2, there is greater growth distal to the lesion site compared to lesions made at P6 (Tan and Harvey, 1997b). It may be that the post lesion growth is simply de novo growth of axons from late-born RGCs rather than regeneration of pre-existing, injured axons. Early and late cohorts of growing RGC axons presumably encounter different developmental terrains as they grow from retina to central targets, possibly resulting in differences in developmental milestones and growth potentials. There may also be differences in guidance cues, further suggesting that gene expression in early vs late born RGCs may differ. To examine differences between early (E15) and late (E19) born RGCs during development, the time-course and extent of programmed RGC death in normal rat pups, and RGC death following the removal of target-derived trophic factors, was assessed. ... On the other hand, LCM captured GCL analysed for gene expression at P0 and P7 revealed decreases in AKT, Math5, Notch1, c-jun, DCC, Arginase-1 mRNA levels and a considerable decrease in GAP-43 expression. It is not surprising to see differences in gene expression between whole eye and the more specific GCL samples, as the cells in all layers of the retina have very different functions and different developmental profiles. It is important to note decreases in mRNA expression in the GCL for a number of the genes analysed at P0 and P7, reflecting cessation of RGC death and completion of axonal growth into central visual targets. I also examined at the protein level expression of DCC, Arginase1, c-Jun and Bcl-2 at birth (P0) in BrdU labeled RGCs born on E15 or E19. When comparing the percentage of double labelled cells compared to the total number of cells expressing each protein, Bcl-2, c-Jun and Arg1 were expressed more in E15 RGCs (22.90%, 72.71%, and 16.44% respectively in E15 RGCs, compared with 0.52%, 13.17% and 3.59% in E19 RGCs). In contrast, DCC was expressed more at birth in E19 RGCs (18.05% in E19 RGCs compared with 9.23% in E15 RGCs). This shows there is clearly a difference in the expression of proteins in the two cohorts of RGCs, which is consistent with PCR data and with their growth state as their axons encounter the changes in the newborn brain. The overall findings of this research suggest that seemingly homogenous populations of neurons are quite different in their developmental profile and in their response to injury. This work may provide new ways of determining better strategies for CNS repair and the most effective way of targeting cells for regeneration and survival.

Thesis (M.Sc.). / Written for the Dept. of Anatomy and Cell Biology. Title from title page of PDF (viewed 2008/07/30). Includes bibliographical references.

The functional compartmentalization underlying neuronal polarity makes tightly regulated intracellular transport between the cell body, axons, and dendrites essential for proper development and homeostatic maintenance. Disruptions to neuronal trafficking are a major cause of neurodegenerative disease. Pathogenic variants in the microtubule motor protein KIF1A cause KIF1A Associated Neurological Disorder (KAND), a spectrum of rare neurodegenerative conditions. KAND is clinically and genetically heterogeneous, with a broad phenotypic spectrum and over a hundred pathogenic variants identified. KAND is poorly understood at both the clinical and molecular level, and there is currently no treatment. This work characterizes the natural history of KAND and describes a novel heuristic severity score. This severity score is then used to show how the location of pathogenic missense variants within the KIF1A motor domain correlates with disease severity, providing evidence the clinical phenotypic heterogeneity in KAND reflects and parallels the molecular phenotypes. Insights from the neuropathology of deceased KAND patients is used to focus a histopathologic assessment of the C3-Kif1aLgdg mouse model. C3-Kif1aLgdg/Lgdg mice have a cerebellar axonal torpedo phenotype, paralleling some of the pathological changes seen in the patients. Phenotypically, the C3-Kif1aLgdg mice were found to recapitulate some of the symptoms seen in patients including progressive spasticity and gait abnormalities associated with hind limb paralysis. To model the disease at a cellular level, iPSCs were derived from affected individuals and successfully used to generate neural stem cells and neurons. These patient-derived neurons were found to have increased markers of protein aggregates, a cellular phenotype that can be used to test potential treatments. Taken together, these studies provide foundational knowledge for future therapeutic development.