Le système immunitaire inné génère des réponses inflammatoires contre les pathogènes ou les cellules dangereuses mais est aussi impliqué dans l'élimination tolérogène des cellules apoptotiques. La reconnaissance des cibles est médiée par un grand nombre de protéines membranaires et solubles. Parmi celles-ci, on trouve les protéines de reconnaissance du complément : C1q, MBL (« mannose-binding lectin) et ficolines. Bien que les propriétés structurales de reconnaissances de la MBL aient été extensivement étudiées, celles des ficolines et du C1q restent à établir. Ceci était l'objectif de la première partie du projet présenté ici. Nous avons analysé par cristallographie aux rayons X la structure des domaines de reconnaissance de ces protéines en présence ou en absence de plusieurs ligands connus. Nous avons montré que les ficolines H et M possédaient un seul site de fixation, conservé au sein des domaines de type fibrinogène. Ce site conservé ne semble pas actif dans la ficoline L, mais de nouveaux sites ont été mis en évidence, créant une surface de reconnaissance étendue favorable à la fixation de larges polymères. Nous avons également trouvé un nouveau site de fixation de la phosphosérine sur C1q. Des propriétés particulières de la ficoline M ont été mises en évidence : la fixation de Neu5Ac, un marqueur du soi, et un changement conformationnel dépendent du pH. Comme l'étude des propriétés de reconnaissance de quelques récepteurs isolés ne lève pas le voile sur le comportement particulier des phagocytes en présence de débris cellulaires, nous avons commencé un nouveau projet afin de comprendre les voies de signalisations activées dans le phagocyte en réponse aux cellules apoptotiques. De nombreuses données suggèrent que le complexe GEF : DOCK/ELMO est commun à de nombreuses voies de signalisation mais aussi un point de régulation. Mon travail dans ce second projet était d'initier la mise en place d'outils cellulaires afin d'étudier le comportement de ce complexe dans différentes lignées cellulaires modèles. J'ai développé un test quantitatif de phagocytose ainsi que des outils pour détecter et sur-exprimer ELMO1. Nous avons également observé la re-localisation de cette protéine dans les coupes phagocytiques.

Abstract The development of colorectal cancer ( CRC ) is believed to follow series progress of pathological changes and with correspondent genetic changes of many genes. This includes intestinal epithelial crypts, aberrant focus, adenoma and carcinoma, each of that commonly involved genetic and proteomic alterations. And in genetic level, it usually includes mutations of APC, p53, K-ras and microsatellite instability. The somatic mutations of APC gene mostly occur in MCR ( Mutation Cluster Region ) in codon 1286-1513. The p53 mutations is dispersed in whole gene with 3 hot spots: codon 175, 248 273. K-ras codon 12 and 13 mutations is preferentially involved in polyps growth of CRC. And microsatellite instability is found in 15-25% CRC patients. We collect polyps and various stages CRC samples in Taiwan, and design 6 primer pairs of APC and p53 which is widely used in western countries to analyze mutations of the local CRC genetic changes. We also use two-dimensional electrophoresis and mass spectrometry to identify protein expression changes in CRC. We have found 30 proteins that exhibited either a significant decrease or increase between normal colon tissue and carcinoma, and 3 out of ( TSD1, TSD2, and TSD3 ) these were significantly associated with tumor progression. TSD3 is annotated by mass spectrometry and is identified to be a c1q-related protein. Though there are no report on the function of c1q-related protein, a NCBI virtual northern analysis shows its expression is varied in various cancer. On the other hand, there are only about 56 % genetic changes of APC and p53 during carcinogensis, which is much less than the 70-85 % mutational rate in western CRC patients. It indicates different genetic mutational pattern of CRC in Taiwan.

La mort cellulaire par apoptose est un processus biologique fondamental, nécessitant des interactions fines avec le système immunitaire pour une reconnaissance et une élimination efficace des cellules mortes. C'est ainsi que C1q, une molécule du complément, essentielle dans le système immunitaire inné, a été mise en évidence comme fortement impliquée dans le mécanisme de reconnaissance et d'élimination des cellules apoptotiques, notamment via sa région globulaire (C1qGR). Récemment, la translocation de la calréticuline (CRT) au niveau externe de la membrane plasmique des cellules cancéreuses a été identifiée comme un signal " eat-me " pouvant être immunogène. Initialement, l'interaction entre la CRT et C1q a été caractérisée à la surface des phagocytes et la CRT a été considérée comme un récepteur pour les queues collagènes de C1q (C1qCLF). L'ensemble de ces observations est en faveur d'un double rôle de la CRT, à la surface des phagocytes et des cellules apoptotiques. Dans un premier temps, l'élaboration d'une stratégie de FRET a permis de détecter une interaction directe entre la CRT et C1qGR à la surface de la cellule HeLa en apoptose précoce. Dans un second temps, la mise en place de tests de phagocytose a permis de montrer que la calréticuline exposée à la surface des cellules apoptotiques peut moduler la phagocytose : des effets opposés ont été observés selon le modèle cellulaire utilisé (HeLa traitées par des ARNi ou MEF CRT-/-) et dans certaines conditions, une modulation combinée de la calréticuline et de C1q a été observée sur la réponse inflammatoire (production de cytokines).

C1q is the first subcomponent of the classical pathway of the complement system and a major connecting link between innate and acquired immunity. As a versatile charge pattern recognition molecule, C1q is capable of engaging a broad range of ligands via its heterotrimeric globular domain (gC1q) which is composed of the C-terminal regions of its A (ghA), B (ghB) and C (ghC) chains. Recent studies using recombinant forms of ghA, ghB and ghC have suggested that the gC1q domain has a modular organization and each chain can have differential ligand specificity. The crystal structure of the gC1q, molecular modeling and protein engineering studies have combined to illustrate how modular organization, charge distribution and the spatial orientation of the heterotrimeric assembly offer versatility of ligand recognition to C1q. Although the biochemical and structural studies have provided novel insights into the structure-function relationships within the gC1q domain, they have also raised many unexpected issues for debate.

Objetivos: Os objetivos deste estudo foram: avaliar a frequência de imunodeficiências primárias de anticorpos e Complemento em pacientes com lupus eritematoso sistêmico juvenil (LESJ); avaliar possíveis associações entre a presença de imunodeficiência primária (IDP) e dados demográficos, ocorrência de infecções, manifestações clínicas, atividade da doença, dano cumulativo e terapêutica direcionada ao LESJ; e determinar a frequência do anticorpo anti-C1q, estabelecendo a sua especificidade, sensibilidade e valores preditivos para o diagnóstico de LESJ. Métodos: Setenta e dois pacientes com LESJ foram avaliados para a determinação dos níveis séricos de imunoglobulinas (IgG, IgA, IgM e IgE) e subclasses de IgG, e dos componentes iniciais da via clássica do sistema Complemento (C1q, C1r, C1s, C4, C2, C3). Sessenta e sete pacientes e 26 controles saudáveis foram avaliados para a presença do anticorpo anti-C1q. O número de cópias do gene C4 foi determinado por PCR (reação de polimerase em cadeia) em tempo real nos pacientes com deficiência de C4. Setenta pacientes foram avaliados para a presença de deficiência de C2 tipo I. Resultados: Evidência de IDP foi identificada em 16 pacientes (22%): 3 com deficiência (D) de C2, 3 com C4D, 2 com C1qD, 4 com IgG2D (<20mg/dL), 3 com IgAD (<7mg/dL), e 3 com IgMD (<35mg/dL); um destes pacientes apresentou deficiência concomitante de IgA, C4 e C2. Quatro dos 13 pacientes do sexo masculino (30%) e 12 das 59 pacientes do sexo feminino (20%) apresentaram diagnóstico de IDP. As características clínicas de LES não diferiram entre os pacientes com e sem IDP. A mediana do SLICC/ACR-DI foi maior entre os pacientes com IDP (p=0,0033), assim como a frequência de SLICC/ACR-DI>1 (p=0,023). Os grupos também foram semelhantes quanto à ocorrência de infecção e terapêutica utilizada para o LESJ. Os únicos dois casos de LESJ com idade de início antes dos 2 anos apresentaram C1qD e IgMD, respectivamente. Para o diagnóstico de LESJ, o anticorpo anti-C1q apresentou especificidade de 100% (IC 86.7-100%), sensibilidade de 19.4% (IC 10.7-30.8%), valor preditivo positivo de 100% (IC 75.3-100%) e valor preditivo negativo de 32,5% (IC 22,4-43,9%). Conclusões: Foi observada uma elevada frequência de imunodeficiências de anticorpos e Complemento nos pacientes com LESJ, sugerindo que esses defeitos podem contribuir para a patogênese do lúpus. Esses achados indicam que os dois grupos de IDPs devem ser investigados em pacientes com LES de início precoce e de maior gravidade / Objectives. The objectives of this study were: to establish the frequency of primary immunoglobulin and Complement deficiency in Juvenile SLE (JSLE); to evaluate possible associations between the presence of primary immunodeficiency and demographic data, occurrence of infections, JSLE clinical manifestations, disease activity, cumulative damage and therapy; and to determine the frequency of anti-C1q antibody, establishing its sensitivity, specificity and predictive values for JSLE diagnosis. Methods. Seventy-two JSLE patients were analyzed for serum levels of immunoglobulin classes (IgG, IgA, IgM e IgE) and IgG subclasses and early components of the classical Complement pathway (C1q, C1r, C1s, C4, C2, C3). Sixty-seven patients and 26 healthy controls were evaluated for the presence of anti-C1q antibody. C4 gene copy number was determined by real time PCR (polymerase chain reaction) in C4 deficient patients. Seventy patients were analyzed by PCR for the presence of type I C2 deficiency. Results. Evidence of PID was identified in 16 patients (22%): 3 with C2 deficiency (D), 3 with C4D, 2 with C1qD, 4 with IgG2D (<20mg/dL), 3 with IgAD (<7mg/dL), and 3 with IgMD (<35mg/dL); one of these patients presented concomitant IgA, C2 and C4 deficiency. Four out of the 13 boys (30%) and 12 out of 59 girls (20%) had PID diagnosis. SLE features did not differ between patients with and without PID. The median SLICC/ACR-DI was higher among PID subjects (p=0.0033), as was the frequency of SLICC/ACR-DI>1 (p=0.023). Both groups did not differ regarding the occurrence of infections and therapeutic for JSLE. The only 2 cases with age of onset below 2 years presented C1qD and IgMD, respectively. For JSLE diagnosis, the anti-C1q antibodies presented a specificity of 100% (CI 86.7-100%), sensitivity of 19.4% (CI 10.7-30.8%), positive predictive value of 100% (CI 75.3-100%) and negative predictive value of 32,5% (CI 22,4-43,9%). Conclusions. A high frequency of immunoglobulin and Complement deficiency was observed in this JSLE series, suggesting that these defects may contribute to lupus development. Our findings indicate that these two groups of PID should be investigated in early-onset and severe lupus

Contexte : La réponse allo-immune induite par la transplantation à partir d'un donneur génétiquement différent est un obstacle majeur au succès de la greffe. Notre objectif est de caractériser les différents phénotypes de rejet d'allogreffe rénale et d'identifier la façon dont chacun est associé aux anticorps anti-HLA. Nous avons également évalué l’impact de certaines propriétés de ces anticorps, comme leur intensité ou leur capacité à fixer le complément, sur l'échec des allogreffes rénales. Pour finir, nous avons étudié l’impact pronostic des formes indolentes de rejets ainsi que l’apport des nouvelles technologies d’analyses transcriptomique des biopsies de patients transplantés. Méthodes : Nous avons utilisé une approche en population, basée sur l’étude de larges cohortes de receveurs de greffes rénales. L’étude concomitante des données immunologiques et histologiques, nous a permis de corréler les caractéristiques des anticorps anti-HLA circulants aux phénotypes lésionnels. Résultats : Nous avons identifié et caractérisé 4 types distincts de rejet : les rejets vasculaires médiés par les lymphocytes T (9%) et par les anticorps (21%), non reconnus par les classifications internationales, et les rejets cellulaires (46%) et humoraux sans vascularite (24%). Le risque de perte de greffons est le plus important dans les cas de rejet vasculaire médié par anticorps. Les anticorps dirigés contre le donneur (DSA) fixant le complément induisent un phénotype histologique plus sévère, dominé par des lésions inflammatoires et plus de dépôts de la fraction C4d du complément dans les greffons. En leur présence, le risque de perte de greffons est augmenté de 3,7 fois (IC95 1,9-7,2). Les formes indolentes de rejet médié par les anticorps sont également associées à un risque accru de perte du greffon. L’utilisation d’approches moléculaires permet d’améliorer la stratification du risque au sein du groupe des patients présentant des rejets humoraux. Conclusion : Ce travail répond à un besoin clinique pressant dans le domaine de la transplantation, celui de déterminer l’impact clinique des anticorps anti-HLA et d’améliorer la stratification du risque immunologique en se basant sur leurs propriétés et l’utilisation de nouvelles technologies pour mieux caractériser l’activité et le stade des rejets humoraux. / Background : The alloimmune response induced by transplantation from a donor who differs genetically from the kidney recipient has always been the major obstacle to graft success. The present work aimed to improve characterization of kidney-allograft rejection phenotypes and identify how each one is associated with anti-HLA antibodies. We also sought to determine whether characteristics of these antibodies i.e., their levels or complementbinding ability, might play a role in kidney allograft failure. Finally, we evaluated the clinical relevance of indolent forms of ABMR and the clinical relevance of new genes expression technologies to stratify the kidney recipients at risk for failure. Methods : We used a population-based approach in precisely phenotyped cohorts of kidney recipients. The design of our study, which is based on the concomitant evaluation of immunologic and histologic data, permits a precise connection of circulating anti-HLA antibodies with a phenotype of graft injury. Findings : We identified four distinct patterns of kidney allograft rejection: T cell-mediated vascular rejection (9%), antibody-mediated vascular rejection (21%), not included in international classifications, T cell- (46%) and antibody-mediated rejection without vasculitis (24%). Risk of graft loss was 9.07 times (95CI 3.6-19.7) higher in antibody-mediated vascular rejection than in T-cell mediated rejections (p<0.0001). Patients with post-transplant complement-binding DSA had more severe graft injury phenotype with higher inflammation and increased deposition of complement fraction C4d. They have the poorest graft survival with 3.7 fold increased risk of graft loss (95CI 1.9-7.2). Subclinical ABMR is a truncated for of rejection associated with risk of kidney allograft failure. Gene expression assessment in kidney allografts with early ABMR improves classification of individuals at risk for kidney allograft loss. Conclusion : This work addresses the unmet need of the deleterious impact of anti-HLA antibodies and the improvement of risk stratification in kidney transplantation. Recognition of distinct phenotypes could lead to the development of new treatment strategies. Gene expression assessment appears useful to evaluate disease activity, disease state and prediction of failure.

Objetivo: Realizar a caracterização molecular dos genes C1q, C4 e C2 em pacientes com lúpus eritematoso sistêmico juvenil (LESJ). Métodos: Quatro pacientes com LESJ e deficiências de C1q,C4 e/ou C2 foram selecionados. O paciente P1 apresentava níveis séricos indetectáveis de C1q e níveis normais de C3 e C4; paciente P2 níveis baixos de C2 e C4 no soro; P3 apresentava níveis baixos de C2 e normais de C3 e C4 e P4 constantes níveis baixos de C4 e níveis normais de C1q, C2 e C3 no soro. Foram sequenciados os genes C1q e C2. Células mononucleares dos pacientes P1, P3 e P4 e de três indivíduos saudáveis foram cultivadas, estimuladas com interferon gama e incubadas por 36 horas e PCR quantitativo (qRTPCR) foi realizado para verificar a expressão de mRNA. Resultados: A caracterização molecular do gene C1q (P1) mostrou trocas heterozigotas na cadeia A (c.276 A>G Gly) e na cadeia C (c.126 C>T Pro). Foram observadas também duas trocas de base em homozigose na região 5\'UTR (c. -159 T>G) e na região 3\'UTR (c*78 A>G) da cadeia B. O qRT-PCR mostrou que a expressão de mRNA de C1qA no paciente P1 sem estimulo estava 1,3 vezes mais baixo e com estímulo de interferon gama estava 1,6 vezes mais expresso se comparado aos indivíduos saudáveis. A expressão de mRNA de C1qB sem estímulo foi 2,2 vezes mais baixo e com estímulo foi 1,5 vezes mais expresso quando comparados aos controles. Para C1qC os indivíduos controles não expressaram mRNA porém o paciente P1 apresentou pequena expressão com e sem estímulo. O sequenciamento do gene C2 dos pacientes P2 e P3 apresentou 100% de similaridade com a sequência de referência com exceção da deleção de 28pb no exon 6 (deficiência heterozigota de C2 do tipo I). A expressão de mRNA de C2 do paciente P3 foi sem estímulo 23 vezes mais baixo e com interferon 4,2 vezes menos expresso quando comparado aos controles. P4 apresentou 2 copias de C4A e 3 copias de C4B e no qRT-PCR o gene C4B estava 14 vezes menos expresso sem estímulo e com estímulo estava semelhante aos controles. Conclusões: As trocas de base em homozigose nas regiões 5\'UTR (região promotora) e 3\'UTR (região de estabilização do mRNA) na cadeia B do gene C1q podem ter modificado a região de transcrição do mRNA pois sua expressão sem estimulo foi baixa. Outras investigações são necessárias para relacionar as variações do gene C1q encontradas com os níveis séricos indetectáveis de C1q. A deficiência de C2 do tipo I heterozigota pode levar a redução na expressão de mRNA e pode estar presente em pacientes lúpicos com níveis séricos detectáveis de C2. Por fim, a baixa expressão de mRNA de C4B mostrou que as dosagens séricas e a avaliação do número de copias podem não ser suficientes para estabelecer a deficiência de C4 / Objective: To perform the molecular characterization of C1q, C4 and C2 genes in patients with Juvenile Systemic Lupus Erythematosus (JSLE). Methods: Four patients with JSLE and C1q, C4 and/or C2 deficiencies were chosen. Patient P1 had undetectable C1q serum level and normal levels of C3 and C4; Patient P2 had decreased levels of C2 and C4 serum while P3 had decreased C2 with normal C3 and C4 levels. Lastly P4 had repeated decreased C4 and normal C1q, C2 and C3 serum levels. C1q and C2 genes were sequenced. Peripheral mononuclear cells from patients P1, P3 and P4 and from three healthy individuals were both cultivated and stimulated with interferon gamma and a quantitative PCR (qRT-PCR) was also performed to verify mRNA expression. Results: C1q molecular characterization for P1 revealed heterozygous silent mutations in A chain (c.276 A>G Gly) and in C chain (c.126 C>T Pro). Additionally, in B chain two homozygous single-base exchanges were detected in the 5´UTR (c. -159 T>G) and 3\'UTR region (c*78 A>G). The qRTPCR revealed that C1qA gene mRNA expression without stimulation was decreased 1.3 times and with interferon gamma was 1.6 times more expressed compared with controls samples. C1qB gene expression without stimulation was 2.2 times decreased and when stimulated was 1.5 times more expressed. Controls did not expressed C1qC gene and patient P1 had low expression both with and without stimulation. P2 had 2 copies of C4A and 1 copy of C4B. C2 gene sequencing (P2 and P3) showed 100% match with referenced sequence, with exception to 28bp deletion at the exon 6 (heterozygous C2 deficiency type I). C2 mRNA expression from P3 without stimulation was 23 times decreased and with interferon was 4.2 times decreased compared with controls. P4 had 2 copies of C4A and 3 copies of C4B. The qRT-PCR were performed only in C4B gene showed without stimulation a 14 times decreased expression and with interferon stimulation the expression were similar to controls. Conclusions: The two homozygous single-base exchanges in 5\'UTR and 3\'UTR that correspond to the promoter region and stabilization mRNA region in B chain of C1q gene, may have modified mRNA transcription as its expression was decreased without stimulation. Further analysis is necessary to relate C1q gene variations and undetectable serum C1q. In addition, heterozygous C2 deficiency type I may lead to reduced mRNA expression and may be present in JSLE patients with detectable C2 levels. Finally, the decreased C4B gene expression showed that serum dosage and gene copy number may not be sufficient to assess C4 deficiency

Objetivos: Os objetivos deste estudo foram: avaliar a frequência de imunodeficiências primárias de anticorpos e Complemento em pacientes com lupus eritematoso sistêmico juvenil (LESJ); avaliar possíveis associações entre a presença de imunodeficiência primária (IDP) e dados demográficos, ocorrência de infecções, manifestações clínicas, atividade da doença, dano cumulativo e terapêutica direcionada ao LESJ; e determinar a frequência do anticorpo anti-C1q, estabelecendo a sua especificidade, sensibilidade e valores preditivos para o diagnóstico de LESJ. Métodos: Setenta e dois pacientes com LESJ foram avaliados para a determinação dos níveis séricos de imunoglobulinas (IgG, IgA, IgM e IgE) e subclasses de IgG, e dos componentes iniciais da via clássica do sistema Complemento (C1q, C1r, C1s, C4, C2, C3). Sessenta e sete pacientes e 26 controles saudáveis foram avaliados para a presença do anticorpo anti-C1q. O número de cópias do gene C4 foi determinado por PCR (reação de polimerase em cadeia) em tempo real nos pacientes com deficiência de C4. Setenta pacientes foram avaliados para a presença de deficiência de C2 tipo I. Resultados: Evidência de IDP foi identificada em 16 pacientes (22%): 3 com deficiência (D) de C2, 3 com C4D, 2 com C1qD, 4 com IgG2D (<20mg/dL), 3 com IgAD (<7mg/dL), e 3 com IgMD (<35mg/dL); um destes pacientes apresentou deficiência concomitante de IgA, C4 e C2. Quatro dos 13 pacientes do sexo masculino (30%) e 12 das 59 pacientes do sexo feminino (20%) apresentaram diagnóstico de IDP. As características clínicas de LES não diferiram entre os pacientes com e sem IDP. A mediana do SLICC/ACR-DI foi maior entre os pacientes com IDP (p=0,0033), assim como a frequência de SLICC/ACR-DI>1 (p=0,023). Os grupos também foram semelhantes quanto à ocorrência de infecção e terapêutica utilizada para o LESJ. Os únicos dois casos de LESJ com idade de início antes dos 2 anos apresentaram C1qD e IgMD, respectivamente. Para o diagnóstico de LESJ, o anticorpo anti-C1q apresentou especificidade de 100% (IC 86.7-100%), sensibilidade de 19.4% (IC 10.7-30.8%), valor preditivo positivo de 100% (IC 75.3-100%) e valor preditivo negativo de 32,5% (IC 22,4-43,9%). Conclusões: Foi observada uma elevada frequência de imunodeficiências de anticorpos e Complemento nos pacientes com LESJ, sugerindo que esses defeitos podem contribuir para a patogênese do lúpus. Esses achados indicam que os dois grupos de IDPs devem ser investigados em pacientes com LES de início precoce e de maior gravidade / Objectives. The objectives of this study were: to establish the frequency of primary immunoglobulin and Complement deficiency in Juvenile SLE (JSLE); to evaluate possible associations between the presence of primary immunodeficiency and demographic data, occurrence of infections, JSLE clinical manifestations, disease activity, cumulative damage and therapy; and to determine the frequency of anti-C1q antibody, establishing its sensitivity, specificity and predictive values for JSLE diagnosis. Methods. Seventy-two JSLE patients were analyzed for serum levels of immunoglobulin classes (IgG, IgA, IgM e IgE) and IgG subclasses and early components of the classical Complement pathway (C1q, C1r, C1s, C4, C2, C3). Sixty-seven patients and 26 healthy controls were evaluated for the presence of anti-C1q antibody. C4 gene copy number was determined by real time PCR (polymerase chain reaction) in C4 deficient patients. Seventy patients were analyzed by PCR for the presence of type I C2 deficiency. Results. Evidence of PID was identified in 16 patients (22%): 3 with C2 deficiency (D), 3 with C4D, 2 with C1qD, 4 with IgG2D (<20mg/dL), 3 with IgAD (<7mg/dL), and 3 with IgMD (<35mg/dL); one of these patients presented concomitant IgA, C2 and C4 deficiency. Four out of the 13 boys (30%) and 12 out of 59 girls (20%) had PID diagnosis. SLE features did not differ between patients with and without PID. The median SLICC/ACR-DI was higher among PID subjects (p=0.0033), as was the frequency of SLICC/ACR-DI>1 (p=0.023). Both groups did not differ regarding the occurrence of infections and therapeutic for JSLE. The only 2 cases with age of onset below 2 years presented C1qD and IgMD, respectively. For JSLE diagnosis, the anti-C1q antibodies presented a specificity of 100% (CI 86.7-100%), sensitivity of 19.4% (CI 10.7-30.8%), positive predictive value of 100% (CI 75.3-100%) and negative predictive value of 32,5% (CI 22,4-43,9%). Conclusions. A high frequency of immunoglobulin and Complement deficiency was observed in this JSLE series, suggesting that these defects may contribute to lupus development. Our findings indicate that these two groups of PID should be investigated in early-onset and severe lupus

Objetivo: Realizar a caracterização molecular dos genes C1q, C4 e C2 em pacientes com lúpus eritematoso sistêmico juvenil (LESJ). Métodos: Quatro pacientes com LESJ e deficiências de C1q,C4 e/ou C2 foram selecionados. O paciente P1 apresentava níveis séricos indetectáveis de C1q e níveis normais de C3 e C4; paciente P2 níveis baixos de C2 e C4 no soro; P3 apresentava níveis baixos de C2 e normais de C3 e C4 e P4 constantes níveis baixos de C4 e níveis normais de C1q, C2 e C3 no soro. Foram sequenciados os genes C1q e C2. Células mononucleares dos pacientes P1, P3 e P4 e de três indivíduos saudáveis foram cultivadas, estimuladas com interferon gama e incubadas por 36 horas e PCR quantitativo (qRTPCR) foi realizado para verificar a expressão de mRNA. Resultados: A caracterização molecular do gene C1q (P1) mostrou trocas heterozigotas na cadeia A (c.276 A>G Gly) e na cadeia C (c.126 C>T Pro). Foram observadas também duas trocas de base em homozigose na região 5\'UTR (c. -159 T>G) e na região 3\'UTR (c*78 A>G) da cadeia B. O qRT-PCR mostrou que a expressão de mRNA de C1qA no paciente P1 sem estimulo estava 1,3 vezes mais baixo e com estímulo de interferon gama estava 1,6 vezes mais expresso se comparado aos indivíduos saudáveis. A expressão de mRNA de C1qB sem estímulo foi 2,2 vezes mais baixo e com estímulo foi 1,5 vezes mais expresso quando comparados aos controles. Para C1qC os indivíduos controles não expressaram mRNA porém o paciente P1 apresentou pequena expressão com e sem estímulo. O sequenciamento do gene C2 dos pacientes P2 e P3 apresentou 100% de similaridade com a sequência de referência com exceção da deleção de 28pb no exon 6 (deficiência heterozigota de C2 do tipo I). A expressão de mRNA de C2 do paciente P3 foi sem estímulo 23 vezes mais baixo e com interferon 4,2 vezes menos expresso quando comparado aos controles. P4 apresentou 2 copias de C4A e 3 copias de C4B e no qRT-PCR o gene C4B estava 14 vezes menos expresso sem estímulo e com estímulo estava semelhante aos controles. Conclusões: As trocas de base em homozigose nas regiões 5\'UTR (região promotora) e 3\'UTR (região de estabilização do mRNA) na cadeia B do gene C1q podem ter modificado a região de transcrição do mRNA pois sua expressão sem estimulo foi baixa. Outras investigações são necessárias para relacionar as variações do gene C1q encontradas com os níveis séricos indetectáveis de C1q. A deficiência de C2 do tipo I heterozigota pode levar a redução na expressão de mRNA e pode estar presente em pacientes lúpicos com níveis séricos detectáveis de C2. Por fim, a baixa expressão de mRNA de C4B mostrou que as dosagens séricas e a avaliação do número de copias podem não ser suficientes para estabelecer a deficiência de C4 / Objective: To perform the molecular characterization of C1q, C4 and C2 genes in patients with Juvenile Systemic Lupus Erythematosus (JSLE). Methods: Four patients with JSLE and C1q, C4 and/or C2 deficiencies were chosen. Patient P1 had undetectable C1q serum level and normal levels of C3 and C4; Patient P2 had decreased levels of C2 and C4 serum while P3 had decreased C2 with normal C3 and C4 levels. Lastly P4 had repeated decreased C4 and normal C1q, C2 and C3 serum levels. C1q and C2 genes were sequenced. Peripheral mononuclear cells from patients P1, P3 and P4 and from three healthy individuals were both cultivated and stimulated with interferon gamma and a quantitative PCR (qRT-PCR) was also performed to verify mRNA expression. Results: C1q molecular characterization for P1 revealed heterozygous silent mutations in A chain (c.276 A>G Gly) and in C chain (c.126 C>T Pro). Additionally, in B chain two homozygous single-base exchanges were detected in the 5´UTR (c. -159 T>G) and 3\'UTR region (c*78 A>G). The qRTPCR revealed that C1qA gene mRNA expression without stimulation was decreased 1.3 times and with interferon gamma was 1.6 times more expressed compared with controls samples. C1qB gene expression without stimulation was 2.2 times decreased and when stimulated was 1.5 times more expressed. Controls did not expressed C1qC gene and patient P1 had low expression both with and without stimulation. P2 had 2 copies of C4A and 1 copy of C4B. C2 gene sequencing (P2 and P3) showed 100% match with referenced sequence, with exception to 28bp deletion at the exon 6 (heterozygous C2 deficiency type I). C2 mRNA expression from P3 without stimulation was 23 times decreased and with interferon was 4.2 times decreased compared with controls. P4 had 2 copies of C4A and 3 copies of C4B. The qRT-PCR were performed only in C4B gene showed without stimulation a 14 times decreased expression and with interferon stimulation the expression were similar to controls. Conclusions: The two homozygous single-base exchanges in 5\'UTR and 3\'UTR that correspond to the promoter region and stabilization mRNA region in B chain of C1q gene, may have modified mRNA transcription as its expression was decreased without stimulation. Further analysis is necessary to relate C1q gene variations and undetectable serum C1q. In addition, heterozygous C2 deficiency type I may lead to reduced mRNA expression and may be present in JSLE patients with detectable C2 levels. Finally, the decreased C4B gene expression showed that serum dosage and gene copy number may not be sufficient to assess C4 deficiency

Au cours de cette thèse, nous avons étudié plus particulièrement deux calréticulines de parasite et leur interaction avec la protéine C1q humaine, dans un contexte de détournement du système immunitaire. En effet, une stratégie de mimétisme moléculaire avec des cellules apoptotiques a été proposée pour l'exposition de calréticuline à la surface de la forme infectieuse du parasite Trypanosoma cruzi, agent vecteur de la maladie de Chagas. Dans le cas du parasite Entamoeba histolytica, agent vecteur de l'amibiase, l'interaction de C1q avec la calréticuline exposée à la surface de l'amibe est utilisée pour mieux phagocyter les cellules de l'hôte.La calréticuline est une protéine principalement localisée dans le réticulum endoplasmique où elle joue le rôle de protéine chaperonne en favorisant le repliement des protéines monoglucosylées. Une des fonctions extracellulaires de la calréticuline humaine est de favoriser l'élimination des cellules apoptotiques par les macrophages. Pour cela, la calréticuline est exposée à la surface des deux types cellulaires, à la surface desquelles elle est reconnue par C1q.Nous avons résolu la structure de fragments des deux CRTs de parasite. Des interactions de type chaperonne et un aperçu de la flexibilité du domaine P ont été observés dans l'empilement cristallin et approfondis par analyse de diffusion des rayons X aux petits angles. Ces fragments générés pour l'analyse structurale nous ont permis en plus d'identifier une région clé dans l'interaction des calréticulines avec C1q. Du côté de C1q, deux mutations dans les régions globulaires de C1q (GRC1q), inhibent l'interaction avec la CRT et les IgM, suggérant un site partagé. Pour approfondir la caractérisation de l'interaction, des études du complexe par RMN ont débuté et nous avons développé une première forme recombinante monocaténaire de GRC1q, dont nous avons déterminé la structure. Nos recherches peuvent aider à développer des traitements contre ces parasites, aussi bien qu'à décrypter le rôle de la CRT des mammifères présente à la surface des macrophages et des cellules apoptotiques. / During this thesis, we were interested in two parasite calreticulin and their interaction with the human C1q protein in the context of the subversion of the immune system. Indeed, a molecular mimicry strategy with human apoptotic cells is suggested for the calreticulin exposure on the surface of the infectious form of the parasite Trypanosoma cruzi, which is responsible of Chagas' disease. In the case of the parasite Entamoeba histolytica, which is involved in amoebiasis, the interaction of C1q with the surface-exposed calreticulin is used to enhance phagocytosis of host cells.Calreticulin is mainly localised in the endoplasmic reticulum, where it acts as a chaperone protein to favour the folding of monoglycosylated proteins. Moreover one of the extracellular functions of human calreticulin is to enhance the clearance of apoptotic cells by macrophages. This function is mediated through C1q interaction with calreticulin exposed on the surface of both cells.We solved the structure of fragments of both parasite calreticulins. Chaperone-like interactions and an overview of the flexibility of the P domain were observed in the crystal packing and deepened using SAXS analyses. The fragments generated for X-ray crystallography studies allowed us to identify a key region of the interaction between C1q and the calreticulins. Two C1q mutations located in its globular regions (GRC1q) inhibit the interaction with calreticulin and IgM, suggesting a common binding area. To further characterise theses interactions, we started NMR experiments and we produced the first single-chain recombinant form of GRC1q, which allowed solving its structure at high-resolution. Our investigations could provide tools to develop therapies against these parasites, and to decipher the role of mammal CRT on the surface of macrophages and apoptotic cells.