Gammaaminosmörsyrareceptorer typ A (GABAAR) är pentameriska ligandstyrda kloridkanaler som uppvisar neurohämmande egenskaper. Därmed är de primära läkemedelsmål för flera ångestdämpande och lugnande läkemedel som används för att minska förekomsten av aktionspotential i neuroner. Trots vikten av dessa receptorer har strukturen av öppen receptor för GABAAR inte lösts hittills, på grund av deras snabba desensibiliseringskinetik. Diazepambindande hämmare (DBI) är en neuropeptid som tidigare rapporterats vara en positiv modulerare för α5β3 GABAAR. I denna studie framställdes DBI genom rekombinant proteinexpression, och den positiva moduleringen undersöktes och karakteriserades med hjälp av voltage-clamp med två elektroder på Xenopus laevis oocyter. För att kunna studera DBI moduleringen skapades GABA dos-responskurvan, och dess karakteristik undersöktes. Baserat på resultaten verkar den positiva moduleringen av DBI vara koncentrationsberoende. Vidare orsakar moduleringen en 2,16-faldig ökning av GABA-framkallad ström vid dess maximala modulationskoncentration. Trots att ström signaler från voltage-clamp uppvisar en viss grad av variabilitet stämmer resultaten överens med tidigare rapporterade observationer som utredde DBI moduleringen respektive GABA dos-responskurvan för α5β3 GABAAR. Dessa resultat kan utnyttjas för att stödja framtida strukturella studier av GABAAR genom att använda denna kunskap om DBI för att potentiellt kunna stabilisera den öppna receptorn, såväl som för att förstå mekanismen för interaktionen mellan DBI och GABAAR. / γ-Aminobutyric acid type-A receptors (GABAARs) are pentameric ligand-gated chloride channels which exhibit neuro inhibitory effects. Hence, they are the primary drug-targets of multiple anxiolytic and sedative drugs used to inhibit the firing rate of neurons. Despite the importance of these receptors, the open structure of GABAAR has not been resolved, owing to their rapid desensitization kinetics. Diazepam binding inhibitor (DBI) is a neuropeptide previously reported to positively modulate the α5β3 GABAARs. In this study, DBI was recombinantly expressed, and this positive modulation was further investigated and characterized by using two-electrode voltage clamp of Xenopus oocytes. For the purpose of studying DBI modulation, GABA dose-response curve was generated, and its characteristics were assessed. Based on the results, the positive modulation of DBI appears to be concentration dependent. Furthermore, the modulation causes a 2.16-fold increase in GABA-elicited current at its maximum modulatory concentration. Although the current traces present some degree of variability, the results are supported by being consistent with previously reported findings investigating DBI modulation and the dose-response curve for α5β3 GABAARs, respectively. These findings can be used to support future structural studies of GABAARs by utilizing this knowledge of DBI to potentially stabilize the open structure of the receptor, as well as in understanding the mechanism of interaction between DBI and GABAARs.

The risks of damage to the developing nervous system of many chemicals are not known because these studies often require costly and time-consuming multi-generational animal experiments. Pluripotent stem cell-based systems can facilitate developmental neurotoxicity studies because disturbances in nervous system development can be modeled in vitro. In this study, neurons derived from embryonal carcinoma (EC) and induced pluripotent stem (iPS) cells, were first characterized to establish their suitability for developmental neurotoxicity studies. The EC stem cell line, TERA2.cl.SP-12, was differentiated into neurons that expressed voltage-gated sodium and potassium channels as well as ionotropic GABA and glutamate receptors. These cells could also fire action potentials when stimulated electronically. However spontaneous action potentials were not observed. In contrast, pre-differentiated neurons derived from iPS cells fired evoked and spontaneous action potentials. Furthermore, iPS cell-derived neurons also expressed a wide array of functional voltage- and ligand-gated ion channels. Antiepileptic drugs (AEDs) are associated with developmental neurotoxicity. These agents can cause congenital malformations, cognitive deficits and behavioral impairment in children as a result of in utero exposure. The impact of four major AEDs, namely phenobarbital, valproic acid, carbamazepine and lamotrigine, on cell viability, cell cycle and differentiation of TERA2.cl.SP-12 into neurons was studied. All AEDs tested reduced differentiating stem cell viability. Valproic acid and carbamazepine increased apoptosis and reduced cell proliferation. A brief exposure to phenobarbital, valproic acid and lamotrigine at the start of differentiation impaired the subsequent generation of neurons. Additionally, the effect of transient exposure to phenobarbital and carbamazepine on neuronal maturation of iPS-derived neurons was investigated. Exposure to both AEDs resulted in diminished membrane potentials and reduced the proportion of cells that were able to fire action potentials spontaneously in culture. The data from these studies suggest that impairments in proliferation, differentiation and maturation of neurons derived from human stem cells may be sensitive indicators of neurodevelopmental disruption by these drugs that can result from in utero exposure. Furthermore, these findings suggest that the use of human pluripotent stem cells and neurons derived from them can reduce the time, cost and the number of animals used in toxicological research.

Studying the preload in a screw joint has been the focus of today’s industry. The manufacturer reflects that demand by investigating different opportunities and techniques to develop this area. There are four different ways of controlling the tightening of bolts and joints to achieve the required clamp force that can hold for a specific preload. Torque control, angle control, gradient control, and ultrasonic clamp-force or elongation control. Many studies do exist about the first three mentioned techniques. However, there are a small number of studies for the ultrasonic clamp-force technique, and there is no study focusing on the usage of machine learning in that technique. This study investigates the use of machine learning to find the optimal frequency used to transmit the ultrasonic signals into the bolt for calculating the bolt elongation. Two machine learning models have been constructed, presenting two approaches: one for one-dimensional data (1D-CNN) and one for two-dimensional data (2D-CNN). The models classify the received signals (echos) with different frequencies into either accepted or non-accepted signals to get the optimal frequencies to be used later on, in the bolt elongation process. Both the 1D-CNN and 2D-CNN show an accepted performance of around 85% accuracy. The results indicate that there does exist a pattern in these ultrasonic signals that are useful for classifying them into accepted and non-accepted frequencies, so the usage of machine learning for the problem is feasible. / Att studera förspänningen i en skruvförband har varit i fokus för dagens industri. Tillverkaren speglar den efterfrågan genom att undersöka olika möjligheter och tekniker för att utveckla detta område. Det finns fyra olika sätt att kontroller åtdragningen av bultar för att uppnå den erforderliga klämkraften som kan hålla för en specifik förspänning. Vridmomentkontroll, vinkelkontroll, gradientkontroll och ultraljudskontroll av klämkraft. Det finns många studier om de tre förstnämnda teknologier. Det finns dock ett litet antal studier för ultraljudsklämkraftstekniken, och det finns ingen studie som fokuserar på användningen av maskininlärning i den tekniken. Denna studie undersöker användningen av maskininlärning för att hitta den optimala frekvensen som används för att beräkna bultens förlängning. Två maskininlärningsmodeller har konstruerats, som presenterar två metoder: en för endimensionell data (1D-CNN) och en för två-dimensionella data (2D-CNN). Modellerna klassificerar de mottagna signalerna (ekon) med olika frekvenser i antingen accepterade eller icke-accepterade signaler för att få de optimala frekvenserna att användas senare, i bultförlängningsprocessen. Både 1D-CNN och 2D-CNN visar en accepterad prestanda på cirka 85% noggrannhet. Resultaten indikerar att det finns ett mönster i dessa ultraljudssignaler som är användbara för att klassificera dem i accepterade och icke-accepterade frekvenser, så användningen av maskininlärning för problemet är genomförbar.

Hyperexcitabilité est l'un des changements les plus importants observés dans de nombreuses maladies neuro-dégénératives telles que la sclérose latérale amyotrophique (SLA) et la maladie d'Alzheimer. De nombreuses recherches études se sont concentrées sur la réduction de l'hyperexcitabilité, soit en inactivant les canaux sodiques ce qui va réduire la génération de potentiels d'action, soit en prolongeant l'ouverture des canaux potassiques ce qui va qui ramener la membrane à son état de repos et réduire l’activité des neurones. Ainsi, pour cibler l'hyperexcitabilité, il faut tout d’abord comprendre les différents aspects de la fonction des canaux ioniques au niveau. Les objectifs des travaux présentés dans cette thèse consistent à déterminer le mécanisme d'inactivation dans les canaux potassiques Shaker. Les canaux Shaker Kv s'inactivent rapidement pour culminer le potentiel d'action et maintenir l'homéostasie des cellules excitables. L'inactivation de type N est causée par les 46 premiers acides aminés situés de l'extrémité N-terminale du canal, encore appelé, peptide d'inactivation (IP). De nombreuses études mutationnelles ont caractérisé l'inactivation de type N au niveau fonctionnel, cependant, la position de l'IP à l'état de repos et leur transition lors de l'inactivation est encore débattue. L'objectif de la première étude consiste à évaluer le mouvement des IP pendant leur inactivation à l'aide de la fluorométrie en voltage imposé. En insérant un acide aminé non naturel, la 3-[(6-acétyl-2-naphtalényl) amino]-L-alanine (Anap), qui est sensible aux changements d'environnement, nous avons identifié séparément les mouvements de la boule et de la chaîne. Nos données suggèrent que l'inactivation de type N se produit dans un mouvement biphasique en libérant d'abord le IP, ce qui va bloquer le pore du côté cytoplasmique. Pour affiner davantage la position de repos des IP, nous avons utilisé le transfert d'énergie de résonance à base de lanthanide et le métal de transition FRET. Nous proposons que le IP se situe dans la fenêtre formée par le canal et le domaine T1, interagissant avec les résidus acides-aminés du domaine T1. Dans notre deuxième étude, nous avons montré que le ralentissement de l'inactivation de type N observé dans la première étude est causée par une expression élevée des canaux Shaker. En effet, l'extrémité C-terminale du canal interagit avec les protéines d'échafaudage associées à la membrane pour la formation d'amas. Nous avons aussi montré qu'en tronquant les quatre derniers résidus C-terminaux impliqués dans la formation des amas, nous empêchons également le ralentissement de la cinétique d'inactivation dans les canaux Shaker. Nous avons également démontré que l'inactivation lente de type N n'est pas affectée par l'accumulation des cations potassiques [K+] externe ou toute diaphonie entre les sous-unités voisines. Cette étude élucide non seulement la cause du ralentissement de l'inactivation, mais montre également que les canaux modifient leur comportement en fonction des conditions d'expression. Les résultats trouvés au niveau moléculaire ne peuvent donc pas toujours être extrapolés au niveau cellulaire. / Hyperexcitability of neurons is a major symptom observed in many degenerative diseases such as ALS and Alzheimer’s disease. A lot of research is focused on reducing hyperexcitability, either by inactivating sodium channels that will reduce the generation of action potentials, or by prolonging the opening of potassium channels which will help to bring the membrane back to resting state and thus, reduce firing frequency of neurons. At the molecular level, it is important to understand different aspects of ion channel function to target hyperexcitability. The aim of this thesis was to investigate in two projects the inactivation mechanism in Shaker potassium channels. Shaker Kv channels inactivate rapidly to culminate the action potential and maintain the homeostasis of excitable cells. The so-called N-type inactivation is caused by the first 46 amino acids of the N-terminus of the channel, known as the inactivation peptide (IP). Numerous mutational studies have characterized N-type inactivation functionally, however, the position of the IP in the resting state and its transition during inactivation is still debated. The aim of the first project was to track the movement of IP during inactivation using voltage clamp fluorometry. By inserting an unnatural amino acid, 3-[(6-acetyl-2-naphthalenyl) amino]-L-alanine (Anap), which is sensitive to changes in environment, we identified the movements of ball and chain separately. Our data suggests that N-type inactivation occurs in a biphasic movement by first releasing the IP, which then blocks the pore from the cytoplasmic side. To further narrow down the resting position of the inactivation peptide, we used Lanthanide-based Resonance Energy transfer and transition metal FRET. We propose that the inactivation peptide is located in the window formed by the channel and the T1 domain, interacting with the acidic residues of the T1 domain. In a follow-up study, we explored the reason underlying slow inactivation kinetics observed during the study of N-type inactivation in the first project. High expression of Shaker channels results in slowing of the N-type inactivation. The C-terminus of the channel interacts with membrane associated scaffold proteins for cluster formation. In this study, we have shown that by truncating the last four C-terminal residues involved in cluster formation, and hence preventing channel clustering, we also prevent slowing of the inactivation kinetics in Shaker channels. We also showed that slow N-type inactivation is not affected by accumulation of external [K+] or any crosstalk between the neighboring subunits. The second project not only elucidates the cause of the inactivation slow-down but illustrates that the channels alter their behavior dependent on the expression conditions. Results found on the molecular level can thus not always be extrapolated to the cellular level.

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Water-assisted crack growth at an epoxy/glass interface was measured as a function of applied strain energy release rate, G, and temperature using a wedge test geometry. The specimens consist of two glass plates bonded with a thin layer of proprietary epoxy adhesive. The crack fronts along the epoxy/glass interfaces were measured using an optical stereomicroscope. The relationship between G and the debonding rate, v, can be measured using this method, and the threshold value of strain energy release rate, Gth, can be determined from the measured data. Two types of testing procedures were conducted in this study: ex situ, i.e., pre-conditioned wedge tests and in situ ones, in which wedges were applied before the specimens were submerged into water. A preliminary model was developed based on the thermal activation barrier concept, and allows the prediction of Gth for the temperatures beyond the testing region. Changes in interfacial strain energy release rate caused by thermal residual stresses in a triple-layered specimen were analyzed in Chapter Three. The method is based on linear elastic fracture mechanics and simple beam theory. The curvature of a bimaterial strip was chosen to characterize the residual stress in the specimen, and the strain energy release rate, caused by both tensile and compressive residual stresses in the adhesive, was derived for an asymmetric double cantilever beam (ADCB) geometry. The contribution of the thermal residual and mechanical stress to the global energy release rate was analyzed. The thermally induced energy release rate, GT, is found to be independent of crack length, but is a function of residual stress level and geometric and material parameters of the specimen. The adhesion of films and coatings to rigid substrates is often measured using blister geometries, which are loaded either by an applied pressure or a central shaft. The measurement will be affected if there are residual stresses that make a contribution to the energy release rate. This effect is investigated using analytical solutions based on the principle of virtual displacements. A geometrically nonlinear finite element analysis is conducted for comparison. Furthermore, the relationships among strain energy release rate, load, deflection, and fracture radius are discussed in detail in Chapter Four. Both analytical solutions and numerical results reveal that uniform tensile residual stresses reduce a specimen's deflection if it experiences plate behavior under small loads. However, this effect diminishes when membrane behavior is dominant. The mechanics of a single-lap joint with different boundary conditions subjected to tensile loading are investigated. Closed-form solutions are obtained for a specimen configuration considering different clamping methods. Based on the approach pioneered by Goland and Reissner, the solutions reported in this paper provide a simple but useful way to understand the effects of boundary conditions on this test geometry. The solutions in this study suggest that different grip configurations mainly affect the response of the specimens if the grip position is close to the joint edge or the loads are small. Generally, the influence caused by different gripping methods is only limited to the boundary region, and the behavior of the joint part subjected to tensile loading is almost the same as that for a simply-supported case. / Ph. D.

No / Phosphorylation or SUMOylation of the kainate receptor (KAR) subunit GluK2 have both individually been shown to regulate KAR surface expression. However, it is unknown whether phosphorylation and SUMOylation of GluK2 are important for activity-dependent KAR synaptic plasticity. We found that protein kinase C-mediated phosphorylation of GluK2 at serine 868 promotes GluK2 SUMOylation at lysine 886 and that both of these events are necessary for the internalization of GluK2-containing KARs that occurs during long-term depression of KAR-mediated synaptic transmission at rat hippocampal mossy fiber synapses. Conversely, phosphorylation of GluK2 at serine 868 in the absence of SUMOylation led to an increase in KAR surface expression by facilitating receptor recycling between endosomal compartments and the plasma membrane. Our results suggest a role for the dynamic control of synaptic SUMOylation in the regulation of KAR synaptic transmission and plasticity.

Les maladies neurodégénératives liées à l’âge, telle celle de Parkinson, sont un problème majeur de santé publique. Cependant, la maladie de Parkinson reste incurable et les traitements sont très limités. En effet, les causes de la maladie restent encore mal comprises et la recherche se concentre sur ses mécanismes moléculaires. Dans cette étude, nous nous sommes intéressés à deux phénomènes anormaux se produisant dans la maladie de Parkinson : l’agrégation de l’α-synucléine et l’activation des cellules microgliales. Pour étudier la polymérisation de l’α-synucléine, nous avons établi de nouvelles méthodes permettant la production in vitro de différents types d’oligomères d’α-synucléine. Grâce à des méthodes biophysiques de pointe, nous avons caractérisé ces différents oligomères à l’échelle moléculaire. Puis nous avons étudié leurs effets toxiques sur les neurones. Ensuite, nous nous sommes intéressés à l’activation des microglies et en particulier à leurs canaux potassiques et aux changements liés au vieillissement. Nous avons identifié les canaux Kv1.3 et Kir2.1 et montré qu’ils étaient impliqués dans l’activation des microglies. En parallèle, nous avons établi une méthode originale qui permet l’isolation et la culture de microglies primaires issues de cerveaux adultes. En comparaison à celles de nouveaux-nés, les microglies adultes montrent des différences subtiles mais cruciales qui soutiennent l’hypothèse de changements liés au vieillissement. Globalement, nos résultats suggèrent qu’il est possible de développer de nouvelles approches thérapeutiques contre la maladie de Parkinson en modulant l’action des microglies ou en bloquant l’oligomérisation de l’ α-synucléine. / Age-related neurodegenerative disorders like Parkinson’s disease take an enormous toll on individuals and on society. Despite extensive efforts, Parkinson’s disease remains incurable and only very limited treatments exist. Indeed, Parkinson’s pathogenesis is still not clear and research on its molecular mechanisms is ongoing. In this study, we focused our interest on two abnormal events occurring in Parkinson’s patients, namely α-synuclein aggregation and microglial activation. We first investigated α-synuclein and its abnormal polymerisation. For this purpose, we developed novel methods, which allowed the in vitro production of different types of α-synuclein oligomers. Using highly sensitive biophysical methods, we characterised these different oligomers at a single-particle level. Then, we tested their biological effects on neurons. Afterwards, we studied microglial activation. We concentrated our efforts on two axes, namely age-related changes in microglial function and K+ channels in microglia. We showed that Kv1.3 and Kir2.1 K+ channels are involved in microglial activation. In parallel, we developed a new approach, which allows the effective isolation and culture of primary microglia from adult mouse brains. Adult primary microglia presented subtle but crucial differences in comparison to microglia from neo-natal mice, confirming the hypothesis of age-related changes of microglia. Taken together, our results support the hypotheses that microglial modulation or inhibition of α-synuclein oligomerisation are possible therapeutic strategies against Parkinson's disease.

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No description available.