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Coyotes (Canis latrans) have inhabited Florida (USA) since the 1960s and are currently found throughout the state. The purpose of the present study was to obtain information on enteric parasites and diet of Florida coyotes from two different habitat types. Seasonal variation in diet was also examined. Fresh coyote fecal samples were collected from protected and urban habitats in Pinellas County, Florida (USA; 27°54' n, 82°41'w) from may 2005 to march 2007. A standard fecal flotation examination and formalin-ethyl acetate sedimentation were utilized on fecal samples collected from the protected (n=40) and urban (n=50) habitats. Five novel (newly documented) parasites of coyotes were discovered; one cestode (Hymenolepis spp.), one nematode (Ascaris spp.), and three protozoa (Balantidium coli, Blastocystis spp., and Entamoeba histolytica). Novel parasites of Florida coyotes were also discovered two cestodes (diphyllobothrium latum and dipylidium caninum), two nematodes (toxocara canis and uncinaria stenocephala), one trematode (paragonimus spp.), and four protozoa (cryptosporidium spp., giardia canis, isospora spp., and sarcocystis cruzi). One cestode (Taenia spp.), three nematodes (Ancylostoma caninum, Physaloptera spp., and Trichurus vulpis), and one trematode (Alaria spp.) were also recovered, all of which have previously been documented in Florida coyotes. Diet items were identified to the lowest possible taxonomic level by gross morphological characteristics and medullary configurations of dorsal guard hairs. A poisson regression was utilized to determine the relation between diet items and habitat, season, and interaction. In the protected habitat (n=49), vegetative matter (96%), Insecta (53%), and Rodentia (45%) were recovered most often, as opposed to berries (56%) and Lagomorpha (32%) in the urban habitats (n=71). Overall, vegetative matter, berries, and Lagomorpha were recovered most often from Florida coyote fecal samples. Odocoileus virginianus, Lagomorpha, and berries varied the most between wet and dry seasons. It is suggested that Florida coyotes are more susceptible to reinfection by novel parasites because of their rapid range expansion and lack of acquired immunity. Rapid habitat loss in Florida (i.e., urbanization) lowers survival of adult coyotes, increases the probability of transmission of disease between wild and domestic canids, and alters the diet of coyotes by lowering biological diversity of available prey items.

Interleukin-8 is a chemokine which is chemotactic for neutrophils and T-lymphocytes and plays a crucial role in the pathogenesis of inflammatory bowel disease. Intestinal mucosal epithelial cells produce IL-8 in response to pathogens which mediates bidirectional communication between pathogen and host. The objective of this study was to investigate the molecular mechanisms involved in IL-8 gene regulation in T84 human colonic epithelial cells. To determine if IL-8 plays a role in the pathogenesis of intestinal amebiasis, the effect of Entamoeba histolytica on IL-8 gene expression was investigated. E. histolytica secreted components enhanced IL-8 mRNA expression and protein production in the absence of amebae-enterocyte contact. The proinflammatory cytokines IL-1beta and TNF-alpha were not involved in IL-8 protein production. As PGE2 is central in mucosal inflammation, the effect of PGE2 on IL-8 gene expression was determined. Using purified PGE2 and PGE2 receptor agonists, it was shown that PGE2 coupled to the EP4 receptor and triggered cAMP-dependent PKA signaling which upregulated IL-8 mRNA expression at the posttranscriptional level. Elevation of [Ca 2+]i from intracellular Ca2+ stores by A23187 or thapsigargin stimulated IL-8 mRNA transcription and IL-8 protein production through the activation of calcineurin. Moreover, IL-8 3'-UTR had a strong suppressive effect on CAT reporter gene expression in COS7 cells by reducing its mRNA level. A unique fragment (nt 2387-2743) containing AU rich elements was shown to attenuate CAT mRNA expression by destabilizing the transcripts. Secondary structure but not AU rich elements played a major role in CAT mRNA turnover.

Charles University, Faculty of Science Department of parasitology Doctoral study programme: Parasitology Abstract (en) Analysis of the genome of a free-living amoeba Mastigamoeba balamuthi and its comparison with pathogenic Entamoeba histolytica Mgr. Vojtěch Žárský Supervisor: prof. RNDr. Jan Tachezy, Ph.D. Praha, 2020 Abstract Examination and comparison of organisms have been tremendously important for the study of life's history on earth. The progress of our understanding of the genetic basis of heredity and the recent boom of sequencing technologies allows us to continue in this exciting field of research from the perspective of genes and genomes. In this work, I focus on the study of an anaerobic amoeba Mastigamoeba balamuthi, which is related to an important human pathogen Entamoeba histolytica. Comparative analysis allows us to draw some conclusions about the nature of the common ancestor of Mastigamoeba and E. histolytica, how it adapted to the anaerobic lifestyle, and about the way the Entamoeba lineage evolved to become a successful parasite. Surprisingly we also noticed that besides hydrogenosomes (hydrogen-producing organelles related to mitochondria), M. balamuthi also harbors peroxisomes - organelles thought to be absent in anaerobic organisms. This finding motivated us to inquire more about...

Der Intestinalparasit Entamoeba histolytica exprimiert während seines gesamten Lebenszyklus zwei Cysteinpeptidase-Inhibitoren der Chagasin-Familie (EhICP1 und EhICP2). Beide EhICPs inhibieren die peptidolytische Aktivität von E. histolytica-Zellextrakten und der humanen Peptidasen Cathepsin B und L unterschiedlich effektiv. Innerhalb der Trophozoiten von E. histolytica sind die EhICPs in verschiedenen Kompartimenten lokalisiert, EhICP1 im Cytosol und EhICP2 in Vesikeln, wo es mit verschiedenen lysosomalen Hydrolasen und mit phagocytierten Partikeln kolokalisiert. Im Vergleich zu den amöbialen Peptidasen liegen die EhICPs im molaren Unterschuss innerhalb der Zellen vor. Außerdem ist die Produktion und Lokalisationen der Peptidasen sowie der verschiedenen physiologische Prozesse, an denen die EhCPs beteiligt sind, unabhängig von der Expression der ehicp-Gene. Die erhaltenen Ergebnisse lassen darauf schließen, dass EhICP1 die Zelle vor versehentlich aus undicht gewordenen Lysosomen freigesetzten Peptidasen schützt, während EhICP2 an housekeeping-Prozessen, wie der Kontrolle der Prozessierung von Peptidasen, beteiligt sein könnte. Neben der Charakterisierung der Cysteinpeptidase-Inhibitoren aus E. histolytica bildeten Untersuchungen an einem Annexin-homologen Protein aus Giardia lamblia, einem anderen Intestinalparasiten, einen weiteren Schwerpunkt der hier vorgestellten Arbeit. Das Annexin-homologe alpha-19-Giardin nimmt unter allen Annexinen eine Sonderstellung dahingehend ein, als dass es als bisher einzig bekanntes Annexin ein N-terminales Signal für eine Doppelacylierung besitzt. Mit Hilfe von verschiedenen Expressionssystemen konnte hier experimentell belegt werden, dass alpha-19-Giardin tatsächlich als Substrat für eine Myristoyl- sowie für eine Palmitoyltransferase fungiert, und diese Modifikation die Membranassoziation des Proteins bewirkt.

Gastrointestinal parasites impose a great and often silent burden of morbidity and mortality on poor populations in developing countries. Veron, Dominican Republic (DR), is a rural city in the southeastern corner of the country where many Dominicans and Haitians migrate to for work in support and expansion of the tourist industry of Punta Cana. Few studies of the prevalence of gastrointestinal (GI) parasitic infections have been published in the DR. Presently, there is a high prevalence of gastrointestinal parasitic infections throughout the poorest areas of the DR and Haiti. This study investigated the prevalence of GI protozoan and helminth parasites from children at the Rural Clinic of Veron during 2008. Participants provided a fecal sample that was examined microscopically for protozoan and helminth parasites using the fecal flotation technique to concentrate and isolate helminth ova and protozoan cysts. Of 108 fecal samples examined, 107 were positive for one or more parasites. Participant ages ranged from 2 to 15 years; 52 were males and 56 were females. Percent infection rates were 48.2% for Ascaris lumbricoides, 13.9% for Enterobius vermicularis, 24.1% for Entamoeba histolytica, and 22.2% for Giardia intestinalis. 9.3% had double infections. A survey of subject characteristics and risk factors was completed by each parent/guardian. Any plan to reduce GI parasites in children of this region will require a determined effort between international, national, and local health authorities combined with improved education of schools, child care providers, food handlers, and agricultural workers. A special effort must be made to reach out to immigrants and those not part of the public education system and to address microbial water quality. / Ph. D.

Au cours de cette thèse, nous avons étudié plus particulièrement deux calréticulines de parasite et leur interaction avec la protéine C1q humaine, dans un contexte de détournement du système immunitaire. En effet, une stratégie de mimétisme moléculaire avec des cellules apoptotiques a été proposée pour l'exposition de calréticuline à la surface de la forme infectieuse du parasite Trypanosoma cruzi, agent vecteur de la maladie de Chagas. Dans le cas du parasite Entamoeba histolytica, agent vecteur de l'amibiase, l'interaction de C1q avec la calréticuline exposée à la surface de l'amibe est utilisée pour mieux phagocyter les cellules de l'hôte.La calréticuline est une protéine principalement localisée dans le réticulum endoplasmique où elle joue le rôle de protéine chaperonne en favorisant le repliement des protéines monoglucosylées. Une des fonctions extracellulaires de la calréticuline humaine est de favoriser l'élimination des cellules apoptotiques par les macrophages. Pour cela, la calréticuline est exposée à la surface des deux types cellulaires, à la surface desquelles elle est reconnue par C1q.Nous avons résolu la structure de fragments des deux CRTs de parasite. Des interactions de type chaperonne et un aperçu de la flexibilité du domaine P ont été observés dans l'empilement cristallin et approfondis par analyse de diffusion des rayons X aux petits angles. Ces fragments générés pour l'analyse structurale nous ont permis en plus d'identifier une région clé dans l'interaction des calréticulines avec C1q. Du côté de C1q, deux mutations dans les régions globulaires de C1q (GRC1q), inhibent l'interaction avec la CRT et les IgM, suggérant un site partagé. Pour approfondir la caractérisation de l'interaction, des études du complexe par RMN ont débuté et nous avons développé une première forme recombinante monocaténaire de GRC1q, dont nous avons déterminé la structure. Nos recherches peuvent aider à développer des traitements contre ces parasites, aussi bien qu'à décrypter le rôle de la CRT des mammifères présente à la surface des macrophages et des cellules apoptotiques. / During this thesis, we were interested in two parasite calreticulin and their interaction with the human C1q protein in the context of the subversion of the immune system. Indeed, a molecular mimicry strategy with human apoptotic cells is suggested for the calreticulin exposure on the surface of the infectious form of the parasite Trypanosoma cruzi, which is responsible of Chagas' disease. In the case of the parasite Entamoeba histolytica, which is involved in amoebiasis, the interaction of C1q with the surface-exposed calreticulin is used to enhance phagocytosis of host cells.Calreticulin is mainly localised in the endoplasmic reticulum, where it acts as a chaperone protein to favour the folding of monoglycosylated proteins. Moreover one of the extracellular functions of human calreticulin is to enhance the clearance of apoptotic cells by macrophages. This function is mediated through C1q interaction with calreticulin exposed on the surface of both cells.We solved the structure of fragments of both parasite calreticulins. Chaperone-like interactions and an overview of the flexibility of the P domain were observed in the crystal packing and deepened using SAXS analyses. The fragments generated for X-ray crystallography studies allowed us to identify a key region of the interaction between C1q and the calreticulins. Two C1q mutations located in its globular regions (GRC1q) inhibit the interaction with calreticulin and IgM, suggesting a common binding area. To further characterise theses interactions, we started NMR experiments and we produced the first single-chain recombinant form of GRC1q, which allowed solving its structure at high-resolution. Our investigations could provide tools to develop therapies against these parasites, and to decipher the role of mammal CRT on the surface of macrophages and apoptotic cells.

A amebíase é uma infecção causada pela Entamoeba histolytica. Entretanto, a diferenciação entre a E. histolytica e a Entamoeba dispar, espécies morfologicamente semelhantes, é fundamental para a conduta terapêutica, prevenção da doença invasiva e para a saúde pública. O propósito desde trabalho foi avaliar a Multiplex-PCR na detecção e diferenciação entre a E. histolytica e a E. dispar. Foi feita uma comparação entre os métodos de exame microscópico das fezes usando o conjunto diagnóstico Coprotest, a detecção de antígenos nas fezes usando um ensaio imunoenzimático comercial e o Multiplex-PCR padronizado no laboratório, para o diagnóstico da amebíase. A Multiplex-PCR foi padronizada usando amostras com parasitos obtidos de culturas padrões. Posteriormente, 127 amostras de fezes provenientes de duas comunidades do Estado do Rio de Janeiro, foram testadas e os resultados comparados. A análise de 127 amostras de fezes pelo exame parasitológico de fezes demonstrou que 27 (21%) amostras foram positivas para o complexo E. histolytica/E. dispar. Dessas amostras, 12 foram positivas pelo Multiplex-PCR, sendo que nove apresentaram o padrão de E. dispar (96 bp) e três o padrão E. histolytica (132 bp). Entre as amostras negativas detectadas pelo exame microscópico, três foram positivas para E. dispar e uma foi positiva para E. histolytica pelo Multiplex-PCR. Esse fato mostrou que a PCR foi mais eficiente do que o exame parasitológico realizado com uma amostra de fezes. Os resultados obtidos pelo ensaio de detecção de antígeno de E. histolytica foram concordantes com o do Multiplex-PCR. A análise estatística comparando os resultados do ELISA coproantígeno com o Multiplex-PCR, não pode ser feita devido ao baixo número de casos de E. histolytica. Os resultados acima indicam a necessidade do uso de métodos mais sensíveis para o diagnóstico da amebíase e a importância de se usar técnicas específicas na diferenciação entre E. histolytica e E. dispar. / Amebiasis is defined as an infection caused by Entamoeba histolytica. However, precise differentiation between E. histolytica and Entamoeba dispar, which are morphologically identical species, is essential for treatment decision, prevention of the invasive disease and public health. The purpose of the present study was to evaluate a Multiplex-PCR for detection and differentiation of E. histolytica from E. dispar. Microscopic examination of stools using the coprotest kit, detection of stool antigen using a commercial enzyme-linked immunosorbent assay kit and a home made Multiplex-PCR, were compared for the diagnosis of amebiasis infection. The Multiplex-PCR was standardized using stool samples with parasites obtained from standard cultures. Afterwards, 127 stool samples obtained from individuals living in two villages of the state of Rio de Janeiro were tested and the results were compared. Analysis of the 127 stools samples by microscopy examination demonstrated that only 27 (21%) samples were positive for E. histolytica /E. dispar complex. Among these stool samples, 12 were positive by Multiplex-PCR, with nine presenting the diagnostic fragment characteristic of E. dispar (96 bp) and three presenting diagnostic fragment of E. histolytica (132 bp). Among the negative samples detected by microscopic examination, three were positive for E. dispar and one was positive for E. histolytica by Multiplex-PCR. This denotes that Multiplex-PCR was more efficient than microscopic examination when single stool samples were analyzed. The results obtained by detection of E. histolytica antigen were in agreement with those obtained by the multiplex-PCR. Statistical analyses comparing coproantigen ELISA with Multiplex-PCR results were not done because of the low number of E. histolytica cases. The overall results indicate the need to use more sensitive methods for the diagnosis of amebiasis infection and the importance of using specific techniques for the differentiation between E. histolytica and E. dispar.

Foodborne illnesses are a significant public health challenge in the United States, with an estimated 9.4 million illnesses annually attributed to the consumption of contaminated food, of which 59% are estimated to be caused by viruses, 39% by bacteria and 2% by parasites. Timely detection and identification of the pathogens causing foodborne outbreaks is vital for the implementation of outbreak control strategies, allowing public health officials to prevent additional illnesses and maintain confidence in the food supply. Public health laboratories employ a variety of traditional and molecular testing techniques to identify foodborne outbreak etiologic agents. One technology is the Luminex XMap® microsphere system, which is also marketed as the Bio-Plex™ 200. This platform has a multiplexing capability with the potential to simultaneously detect up to 100 targets in one reaction. The studies described here show that the combination of two Bio-Plex assays with real-time virus assays and one extraction method provides a flexible foodborne outbreak screening algorithm that potentially identifies an outbreak-associated pathogen on the first day of specimen submission and aids in focusing confirmatory laboratory testing. In these studies, two microsphere-based assays were designed for use on the Bio-Plex 200 system as screening assays for the detection of four enteric protozoa (Giardia intestinalis, Cyclospora cayetanensis, Cryptosporidium parvum, Entamoeba histolytica) and six virulence determinants of shiga toxin-producing Escherichia coli (STEC), enterotoxigenic Escherichia coli (ETEC), enteroinvasive Escherichia coli (EIEC) and Shigella spp. Precision and limits of detections were established for both assays. The sensitivity and specificity of the protozoan assay as compared to reference methods ranged from 81.25% to 100% for most targets, while sensitivity for the E. histolytica target was 42.86%. Sensitivity and specificity for the bacterial assay was 100% as compared to reference methods. However, cross-reactivity of the protozoan assay E. histolytica target with E. dispar and of the bacterial assay uidA target with enteropathogenic E. coli strains was noted. Additionally, real-time detection of norovirus and rotavirus nucleic acids extracted with the QIAamp DNA Stool Mini Kit was statistically comparable to detection when extracted with the Ambion® MagMAX™-96 Viral RNA Isolation Kit combined with the KingFisher® Magnetic Particle Processor.

Submitted by Cleide Dantas (cleidedantas@ufpa.br) on 2014-02-10T15:51:25Z No. of bitstreams: 2 license_rdf: 23898 bytes, checksum: e363e809996cf46ada20da1accfcd9c7 (MD5) Dissertacao_DiagnosticoEpidemiologiaEntamoeba.pdf: 995446 bytes, checksum: ea0b513fd6b22a2126668e5b3c199b15 (MD5) / Approved for entry into archive by Ana Rosa Silva (arosa@ufpa.br) on 2014-04-03T15:50:21Z (GMT) No. of bitstreams: 2 license_rdf: 23898 bytes, checksum: e363e809996cf46ada20da1accfcd9c7 (MD5) Dissertacao_DiagnosticoEpidemiologiaEntamoeba.pdf: 995446 bytes, checksum: ea0b513fd6b22a2126668e5b3c199b15 (MD5) / Made available in DSpace on 2014-04-03T15:50:21Z (GMT). No. of bitstreams: 2 license_rdf: 23898 bytes, checksum: e363e809996cf46ada20da1accfcd9c7 (MD5) Dissertacao_DiagnosticoEpidemiologiaEntamoeba.pdf: 995446 bytes, checksum: ea0b513fd6b22a2126668e5b3c199b15 (MD5) Previous issue date: 2008 / Amebíase é a infecção no homem causada pelo protozoário Entamoeba histolytica, apresentam quadros sem manifestações clínicas até graves de elevada morbimortalidade e sendo responsável por milhões de casos de disenteria e abscessos hepáticos a cada ano. Os dados epidemiológicos da amebíase no Brasil estão sendo reavaliados desde que a Entamoeba histolytica (patogênica) foi considerada espécie distinta da Entamoeba dispar (não patogênica). Neste estudo, realizou- se o diagnóstico da amebíase por meio de métodos parasitológicos, pesquisa de antígenos e método molecular em amostras fecais de pacientes residentes no município de Juruti, Pará, Brasil. Foram analisadas 188 amostras, com positividade em 28 (14,89 %) no método imunológico, que foi considerado como padrão ouro. A infecção por E. histolytica foi maior no grupo etário acima de 14 anos (8,51%) que no grupo de 0-14 anos (6,38%), porém sem significância estatística (p > 0,05). Houve discordância nos resultados dos métodos ELISA e coproscópico em 41 amostras (21,81%), com maior número de positivos no teste imunoenzimático. O diagnóstico pelo método de PCR apresentou positividade de 5,88% (3/51), resultado inferior ao observado na microscopia (7,84% - 4/51) e teste de ELISA (11,76% - 6/51). Assim, nossos resultados sugerem que a amebíase intestinal é um problema de saúde pública no município de Juruti. / The amebiasis is a human infection caused by the protozoa Entamoeba histolytica, which can be without any clinical manifestations till severe ones with high morbidity and mortality, and is responsible for millions of dysenteric cases an hepatic abscesses, annually. The epidemiological data of amebiasis in Brazil are under revision and reevaluation since the Entamoeba histolytica (pathogenic) was considered a distinct specie from Entamoeba dispar (non pathogenic). In this study, it was carried out the diagnosis of amebiasis by parasitological and molecular methods and antigen search (ELISA) in stool samples from residents in the municipality of Juruti, Pará state, Brazil. We had analyzed 188 stool samples, with positivity in28 (14,89 %) on the immunological test, which was considered as gold standard. The infection by E. histolytica was higher in the age group over 14 years old (8,51%) than in the one of 0-14 years (6,38%), but it was not showed statistical significance (p >0,05). There was discordance between the results of ELISA and microscopical methods in 41 samples (21,81%), and the immuno enzymatic had detected more positive samples than the other one. The diagnosis by PCR method was positive in 3/51(5,88%), result inferior to the one observed by microscopy (7,84% - 4/51) and by ELISA (11,76% - 6/51). Thus, our results suggest that the intestinal amebiasis is an problem of public health in the municipality of Juruti.