Metallpniktide und -chalkogenide erfahren zunehmend mehr Aufmerksamkeit in Chemie und Festkörperphysik. Dieses Interesse liegt unter anderem in der ungewöhnlichen Strukturchemie der Verbindungen begründet. In den Pniktogen(Pn)- bzw. Chalkogen(Q)-reichen Verbindungen dieser Systeme ist besonders häufig die Bildung der jeweiligen Oligo- oder Polyanionen bzw. Moleküle zu beobachten. Einerseits können die homoatomaren Pn–Pn- bzw. Q–Q-Bindungen zur Ausbildung niederdimensionaler Strukturmotive mit anisotropen Eigenschaften, wie bspw. Supraleitung und Metall-Halbleiter-Übergänge, führen; andererseits ergeben sich aus dem sterischen Raumanspruch der Struktureinheiten in Kombination mit den hohen Koordinationszahlen schwerer Übergangs- oder Actinoidmetalle komplexe Strukturen. Die Pn- bzw. Q-Atome treten häufig gemischtvalent auf, was zusammen mit den beschriebenen Strukturmerkmalen die enorme Variabilität und Anpassungsfähigkeit dieser Stoffsysteme widerspiegelt. Im Rahmen des ersten Teils der vorliegenden Dissertation wurde die potentielle Oligoanionenbildung in den bisher als quadratisch-planar beschriebenen Phosphidschichten von Actinoidphosphidtelluriden diskutiert. Über eine chemische Transportreaktion mit Iod ist es gelungen Kristalle des Uranphosphidtellurids UPTe und des verwandten, bisher unbekannten Diuranphosphidditelluridoxids U2PTe2O zu züchten und die Kristallstrukturen durch Einkristallröntgendiffraktometrie aufzuklären. Die Strukturen beider Verbindungen können durch eine Abfolge von [U2P2]- und [Te2]-Schichten, bzw. [U2P2]-, [U2O2]- und [Te2]-Schichten entlang [001] beschrieben werden. Die Phosphoratome in den [U2P2]-Abschnitten bilden eine Schicht parallel ausgerichteter P2-Anionen. Die Zusammenlagerung der Phosphoratome sowie die geordnete Ausrichtung der Hanteln bedingt eine Symmetriereduktion der ursprünglich tetragonal angenommenen Struktur mit fehlgeordneten Phosphoratomen hin zu einem Strukturmodell in der monoklinen Raumgruppe I11m. Bindungsanalysen im Realraum mit Hilfe des Elektronen-Lokalisierbarkeits-Indikator (ELI D) ergaben für UPTe in der monoklin verzerrten Struktur ein zusätzliches Doppelmaximum auf der gedachten Linie zwischen den Phosphoratomen P1 und P2, welches als homoatomare P–P-Bindungen interpretiert werden kann. Zudem konnte über eine Festkörpersynthese die ternäre Verbindung Thoriumphosphidtellurid ThPTe erhalten werden, deren Pulverröntgendaten ein zu UPTe analoges Strukturbild zeigt. Wenngleich die Fehlordnung in der Phosphorschicht von ThPTe experimentell nicht aufgelöst werden konnte, war es durch Raman-Spektroskopie möglich, die Existenz der P2 Hanteln sowohl in ThPTe als auch in UPTe zu belegen. Beide isotype Verbindungen können in ionischer Grenzschreibweise als A4+ + ½ P24– + Te2– (A = Th, U) formuliert werden. Im zweiten Teil der vorliegenden Dissertation wurde die vielfältige Strukturchemie neuer Selen-Halogenid-Komplexe des Iridiums insbesondere hinsichtlich ihrer Oligoselenidliganden sowie koordinativ gebundener Selenmoleküle dargelegt. Durch die Aktivierung von elementarem Iridium in Selentetrahalogenid-Schmelzen konnten erstmalig Verbindungen im System Ir–Se–Br dargestellt und die Strukturvielfalt im System Ir–Se–Cl signifikant erweitert werden. Die synthetisierten ein- bis achtkernigen Iridium(III)-Komplexe zeichnen sich durch eine bemerkenswerte Diversität ihrer Liganden aus, die von Halogenidionen, Selenmono- und Selendihalogenid-Einheiten über zyklische Selenmoleküle bis zu Oligoselenidketten reicht. Die variablen Verknüpfungsmoden dieser Liganden erweitern zusätzlich das Spektrum möglicher Komplexformen und -größen. Die kleinsten, dargestellten ternären Iridiumkomplexe a-fac-[IrBr3(SeBr2)3], m-fac-[IrBr3(SeBr2)3] und mer-[IrBr3(SeBr2)3] besitzen ausschließlich endständige Selendibromid- und Bromidliganden, die sich in ihrer Konfiguration unterscheiden. In den isotypen, zweikernigen Iridiumkomplexen [Se9(IrX3)2] (X = Cl, Br, Cl/Br) wird ein ungeladener, unter den Allotropen des Selens unbekannter Se9-Ring in Kronen-Konformation durch zwei IrX3-Moleküle stabilisiert. Der cyclo-Nonaselenligand ist der erste seiner Art, der mittels Röntgenbeugung am Einkristall charakterisiert werden konnte. Se9(IrCl1.66(1)Br1.34(1))2 repräsentiert zudem die erste quaternäre Verbindung in den Systemen M–Se–Cl–Br (M = Platinmetalle). Die ringförmigen, vier- und sechskernigen Komplexe [Ir4Se10Br16] sowie [Ir6Se8Cl30] und [Ir6Se6Cl30] zählen zu den größten Ringstrukturen unter den Chalkogen-Halogeniden der Platinmetalle. Ihre intramolekulare Verknüpfung wird unter anderem durch µ-verbrückende X–-Anionen und sehr seltene (SeX)–-Einheiten realisiert. Die verwandten [Ir6Se8Cl30]- und [Ir6Se6Cl30]-Ringe können als molekularer Ausschnitt der aus [IrCl6/2]-Oktaedern bestehenden Honigwabenstruktur von alpha-IrCl3 beschrieben werden. Die achtkernigen Iridiumkomplexe [Ir8Se28Br14] und [Ir8Se40Br10] bilden über die sechsfach-verbrückenden Se22–-Hanteln und die vierfach-verbrückenden Se42–-Ketten sehr große, ellipsoide Moleküle aus, die stark einem Ausschnitt aus der Netzwerkstruktur von Ir3Se8 ähneln. Beide Komplexe unterscheiden sich lediglich in ihren apikal koordinierenden Liganden: SeBr2-Einheiten im Fall von [Ir8Se28Br14] und ungeladene Heptaselenringe im Fall von [Ir8Se40Br10]. Die Se7-Moleküle repräsentieren ihrerseits die ersten cyclo-Heptaseleneinheiten in Boot-Konformation. An den [Ir8Se28Br14] Komplex koordinieren über Wasserstoffbrückenbindungen zusätzlich zwei Wassermoleküle. Die räumliche Anordnung der Moleküle im Festkörper von Ir8Se28Br14·2H2O stellt eine hervorragende Näherung der dichtesten Ellipsoidpackung dar.

Leiodolide A is a unique natural product isolated from Pacific marine sponges which has provided an interesting target for total synthesis due to its complex structure and undefined stereochemistry. Although synthetic work towards the synthesis of sister compound leiodolide B has been published, the total synthesis of leiodolide A is yet to be achieved but remains an important target due to high potency against leukaemia, non-small lung and ovarian cancers. The convergent strategy towards the synthesis of leiodolide A involved the synthesis of three subunits; a synthetic route to the C21-C25 vinyl stannane is described, and efforts towards the synthesis of the bidirectional C11-C20 subunit are detailed. Asymmetric vinylogous aldol methodology was developed for the installation of the 1,2-syn propionate motif found in the C1-C10 subunit and in other polypropionate natural products, and was shown to be applicable to a range of substrates in moderate diastereoselectivity and excellent enantioselectivity.

This thesis is an investigation of the natural products deriving from marine algae and cyanobacteria and has resulted in the discovery of eleven new secondary metabolites. The structure elucidations of these new molecules were performed using a variety of spectroscopic techniques. Four new macrolides were isolated and characterized from the Madagascar marine cyanobacterium Geitlerinema sp. These ankaraholides are structurally similar to the potently cytotoxic swinholides and were found to have cytotoxicities ranging from 178 nM to 354 nM against human lung cancer (NCI-H460) and mouse neuro-2a cell lines. Since swinholide-type compounds were previously localized to the heterotrophic bacteria of sponges, these findings raise intriguing questions about their true metabolic source. Geitlerinema sp. was found to be particularly rich in chemistry, and also produced the new linear lipopeptide mitsoamide with unusual structural features including an aminal moiety, a homolysine residue and a polyketide unit (3,7- dimethoxy-5-methyl- nonanedioic acid) (DMNA). A collection of the red marine alga Portieria hornemannii from the south of Madagascar (Tolagniaro, Fort Dauphin), led to the isolation of the previously reported halogenated monoterpene, halomon, and the discovery of three new related metabolites. These molecules were found to inhibit DNA methyltransferase 1 (DNMT-1). As a result of efforts to identify bioactive agents from the marine cyanobacterium Lyngbya majuscula, tanikolide dimer, a novel SIRT2 inhibitor (IC50 = 176 nM), and tanikolide seco-acid were isolated. The depside molecular structure of tanikolide dimer, which is likely a meso compound, was established by NMR, MS and chiral HPLC analyses. The structure of tanikolide dimer raises a number of intriguing configurational and biosynthetic questions for further study. The bioassay guided fractionation of a collection of the brown marine alga Dictyota sp. from Netherland Antilles Playa Fort, led to the identification of a novel HDAC inhibitor with a dolastane carbon skeleton. The novel molecule was also found to possess antimalarial activity. Other known HDAC inhibitors with interesting antimalarial activity have been reported previously, and based on this efficacy against malaria, HDAC appears to be a viable target for the development of antiparasitic agents. / Graduation date: 2006

Ce travail développe différentes stratégies pour la synthèse énantiosélective de sesquiterpènes naturels à partir de chirons obtenus par biocatalyse. La première partie est consacrée aux premières synthèses énantiosélectives de la kopéoline, et de la kopéolone. La synthèse de la structure décrite de la kopéoline est réalisée, les composés ont été entièrement caractérisés. Les résultats montrent que les structures reportées n'ont pas été correctement assignées, et suggèrent une mauvaise attribution des stéréocentres au cours de l'isolement des produits naturels. Ainsi, deux nouvelles structures sont proposées. Les synthèses totales de ces deux dernières structures ont également été réalisées et ont permis de confirmer la révision structurelle et de caractériser complètement ces produits naturels tout en élucidant leurs configurations absolues inconnues jusqu'alors.La seconde partie aborde la synthèse du siphonellinol D selon une méthodologie convergente d'une partie Est et d'une partie Ouest. Les deux énantiomères d'un chiron ont été obtenus par dédoublement cinétique enzymatique avec des rendements élevés et d'excellentes énantiosélectivités. À partir de l'énantiomère (1S, 6R), la synthèse de la partie Est est rapportée. Malheureusement, une première méthodologie employant l'énantiomère (1R, 6S) n'a pas permis l'obtention de la partie bicyclique Ouest. Une seconde méthodologie utilisant le géraniol comme substrat a permis l'accès à la partie Ouest du siphonellinol D sous forme racémique. Une réaction de couplage entre ces deux parties a été réalisée avec succès permettant d'envisager de manière optimiste la synthèse du siphonellinol D par ce chemin synthétique. / This work deals with different strategies used in the course of the enantioselective synthesis of natural sesquiterpenes starting from an enantiopure building block obtained by biocatalysis. The first part is dedicated to the first enantioselective syntheses of kopeolin, and kopeolone. The synthesis of kopeolin was achieved and compounds have been fully characterized. The results showed that the reported structures were not assigned correctly, and suggest an initial structural misassignment during the isolation of the natural products. Thus, two new structures for kopeolin and for kopeolone are proposed. The enantioselective total syntheses of these two proposed structures have been achieved and permitted to confirm the structural revision and to fully characterize these natural products while elucidating their hitherto unknown absolute stereochemistries.The second part is dedicated to the synthesis of siphonellinol D with a convergent methodology of the Eastern part and the Western part. Both enantiomers of this building block were obtained by an enzymatic kinetic resolution in high yields and excellent enantioselectivities. Starting from the (1S, 6R) enantiomer, the synthesis of the Eastern part of Siphonellinol D is reported. Unfortunately, a first methodology using the use of the (1R, 6S) enantiomer failed. A second methodology using geraniol as starting material led to the racemic Western part of siphonellinol D. A coupling reaction were successfully performed allowing us to consider the synthesis of siphonellinol D by this synthetic pathway as optimistic.

Le travail présenté dans cette thèse porte sur l’isolement de métabolites secondaires de trois invertébrés marins, ainsi que sur la synthèse de molécules hybrides, notamment à visée antifouling et inhibiteurs de kinases, inspirées des motifs naturels issus des familles dispacamides et 3-alkylpyridines. Les techniques spectroscopiques et les transformations chimiques ont été largement utilisées pour les déterminations structurales. Les nouveaux composés ont été évalués biologiquement.Le travail d’isolement sur le corail mou Sinularia vanderlandi a permis de mettre en évidence trois nouveaux composés de la famille de diterpènes norcembranoïdes, dont les configurations relatives ont été déterminées. Un lien chimique a également été établi entre les nouveaux composés isolés ainsi que ceux de la même famille décrits dans la litérature.Neuf nouvelles molécules ont été obtenues de l’éponge Pipestela candelabra, quatre phopholipides et cinq composés de la famille du jaspamide, les pipestelides A-C ainsi que les 5-hydropéroxy-jasplakinolides Ca et Cb. Des travaux d’hémisynthèse ont été réalisés à partir du jaspamide pour confirmer les structures des dérivés hydropéroxydés. Cette thèse contient également une étude partielle de l’éponge Stylissa carteri qui a mis a jour deux nouvelles benzosceptrines.Les travaux de synthèses ont eu pour but d’établir les voies d’accès à des dérivés l’obtention dispacamide / 3-alkylpyridine. Trois dérivés ont ainsi été synthétisés et les évaluations biologiques sont en cours, notamment pour les activités antifouling. Des aspects structuraux de ce type de dérivés ont été abordés par la synthèse d’autres dérivés. / The work described in this thesis deals with the isolation of new metabolites from marine invertebrates in one hand, and with the synthesis of antifouling and kinase inhibitors hybrid molecules inspired from dispacamide and 3-alkylpyridine scaffolds. Spectroscopic methods and chemical modifications were used for structural determination. The new compounds were biologically evaluated.Three new compounds of the norcembranoid diterpenes were isolated from the Soft Coral Sinularia vanderlandi. The relative configurations of these metabolites were determined and a chemical link was established between these diterpenes.The investigation of the marine Sponge Pipestela candelabra has conducted to the isolation of nine new metabolites, four phospholipids and five new jaspamide congeners including pipestelides A-C and 5-hydroperoxy-jasplakinolides Ca et Cb. Hemisynthesis were conducted from the jaspamide, together with spectroscopic analysis to confirm the structures of the peroxidated compounds.Two new derivatives of benzosceptrine were isolated from a partial study of the marine Sponge Stylissa carteri.The synthesis part of this work described the access to dispacamide / 3-alkylpyridine derivatives. Three hybrids were synthetized and biological evaluation are in progress, particularly for antifouling activities. Structural aspects were also studied by the synthesis of other derivatives

<p>In this thesis, methods for studying different aspects of proteomics were developed with Fourier Transform Ion Cyclotron Resonance, (FTICR), mass spectrometry. The FTICR technique provides ultra-high mass resolving power, mass accuracy at sub ppm level and sensitivity in the attomole region.</p><p>Methods for quantifying biomarkers in body fluids such as cerebrospinal fluid, (CSF), and plasma were developed. Two sets of global markers with different properties were used for quantitative analysis; S-Methyl Thioacetimidate, (SMTA), and S-Methyl Thiopropionimidate, (SMTP), and [H₄]- and [D₄]-1-Nicotinoyloxy succinimide ester. Reduced ion suppression and higher sensitivity was obtained by coupling a High Performance Liquid Chromatography, (HPLC), system to the FTICR mass spectrometer.</p><p>In body fluids, proteins and peptides are present in a broad dynamic concentration range. Therefore, depleting abundant proteins prior to analysis results in decreased ion suppression and increased sensitivity. Two commercial depletion kits were evaluated with the SMTA- and SMTP-markers.</p><p>For both types of global markers, the experimental error for quantitative analysis of abundant proteins was less than 30%. This provides a lower limit for the protein up- and down regulations in complex solutions that can be monitored with HPLC-FTICR mass spectrometry.</p><p>Together with the identity and quantity of selected proteins the structure, dynamics and interactions with other molecules are of great importance. The later can be elucidated with Hydrogen/Deuterium Exchange, (HDX), mass spectrometry. Structural information at high resolution can be obtained with Collision-Induced Dissociation, (CID), HDX mass spectrometry. In this thesis, exchange rates of amide hydrogens in peptides were in excellent agreement with NMR results.</p><p>In some cases, the CID-fragments have different gas-phase exchange properties and as a consequence the solution phase exchange process can not be monitored. By applying Electron Capture Dissociation, (ECD), at ultra-high vacuum, the exchange process at a specific residue could be monitored.</p>

In this thesis, methods for studying different aspects of proteomics were developed with Fourier Transform Ion Cyclotron Resonance, (FTICR), mass spectrometry. The FTICR technique provides ultra-high mass resolving power, mass accuracy at sub ppm level and sensitivity in the attomole region. Methods for quantifying biomarkers in body fluids such as cerebrospinal fluid, (CSF), and plasma were developed. Two sets of global markers with different properties were used for quantitative analysis; S-Methyl Thioacetimidate, (SMTA), and S-Methyl Thiopropionimidate, (SMTP), and [H4]- and [D4]-1-Nicotinoyloxy succinimide ester. Reduced ion suppression and higher sensitivity was obtained by coupling a High Performance Liquid Chromatography, (HPLC), system to the FTICR mass spectrometer. In body fluids, proteins and peptides are present in a broad dynamic concentration range. Therefore, depleting abundant proteins prior to analysis results in decreased ion suppression and increased sensitivity. Two commercial depletion kits were evaluated with the SMTA- and SMTP-markers. For both types of global markers, the experimental error for quantitative analysis of abundant proteins was less than 30%. This provides a lower limit for the protein up- and down regulations in complex solutions that can be monitored with HPLC-FTICR mass spectrometry. Together with the identity and quantity of selected proteins the structure, dynamics and interactions with other molecules are of great importance. The later can be elucidated with Hydrogen/Deuterium Exchange, (HDX), mass spectrometry. Structural information at high resolution can be obtained with Collision-Induced Dissociation, (CID), HDX mass spectrometry. In this thesis, exchange rates of amide hydrogens in peptides were in excellent agreement with NMR results. In some cases, the CID-fragments have different gas-phase exchange properties and as a consequence the solution phase exchange process can not be monitored. By applying Electron Capture Dissociation, (ECD), at ultra-high vacuum, the exchange process at a specific residue could be monitored.

No description available.

Thesis (PhD)-- Macquarie University, Division of Environmental and Life Sciences, Dept. of Chemistry and Biomolecular Science. 2006. / Bibliography: p. 229-249. / Ch. 1. Introduction -- ch. 2. An ethnobotanical study with the Kamilaroi and Muruwari Aboriginal communities and relationship building -- ch. 3. Biological assay methods and optimisation -- ch. 4. Ethnopharmacological study of Eremophila sturtii -- ch. 5. Ethnopharmacological study of Exocarpos aphyllus -- ch. 6. General conclusions -- Appendices. / This study covered the documentation of first-hand medicinal plant knowledge of Aboriginal communities in northern New South Wales through the isolation and characterisation of bioactive compounds from Aboriginal medicinal plants. / Mode of access: World Wide Web. / xx, 249 p. col. ill., maps, ports

A análise de fármacos é fundamental nas diversas fases do desenvolvimento farmacêutico, tais como em estudos de formulação, estabilidade e controle de qualidade do produto. O mesilato de gemifloxacino (MGF), liberado para uso clínico no Brasil em novembro de 2006 com o nome comercial de Factive®, é uma fluorquinolona indicada para o tratamento da exacerbação aguda da bronquite crônica e da pneumonia adquirida da comunidade. A literatura pesquisada apresenta poucos relatos de determinação quantitativa e de estudos de estabilidade do fármaco em comprimidos revestidos. Anteriormente aos estudos, foi realizada a caracterização da substância química de referência (SQR) de MGF por espectrofotometria no infravermelho (E IV), ressonância magnética nuclear de hidrogênio (RMN 1H) e carbono (RMN 13C), análise térmica por calorimetria exploratória de varredura (DSC) e determinação da faixa de fusão. Métodos analíticos para determinação qualitativa e quantitativa foram desenvolvidos e validados por espectrofotometria na região do ultravioleta (E UV) e visível (E VIS), cromatografia líquida de alta eficiência (CLAE), eletroforese capilar (EC) e ensaio microbiológico pelo método de cilindros em placas. A validação de um método de dissolução baseado em dados in vivo do fármaco também foi realizada. A elucidação do produto de degradação isolado em condições alcalinas foi realizada por E IV, RMN de 1H, 13C e correlação (COSY, HSQC e HMBC), espectrometria de massas (EM) e emissão atômica. Estudos de citotoxicidade, fototoxicidade, genotoxicidade e fotogenotoxicidade foram empregados para conhecimento da toxicidade dos produtos analisados. / The drug analysis is essential in all areas of the pharmaceutical development, such as during formulation studies, stability and quality control of the product. Gemifloxacin mesylate (GFM), approved for clinical use in Brazil in November of 2007 with the commercial name of Factive®, is a fluoroquinolone prescribed for the treatment of acute exacerbations of chronic bronchitis and community-acquired pneumonia. The research literature shows a few studies of quantitative determination and stabilities studies of the drug in coated tablets. Previously, it was performed the characterization of the reference chemical substance of GFM by infrared spectrometry (IR), nuclear magnetic resonance of 1H (1H NMR) and 13C (13C NMR), thermal analysis by differential scanning calorimetry (DSC) and determination of the melting range. Analytical methods for qualitative and quantitative determination were developed and validated by ultraviolet (UV) and visible (Vis) spectrophotometry, highperformance liquid chromatography (HPLC), capillary electrophoresis (CE) and microbiological assay applying the cylinder–plate method. The validation of the dissolution method based on in vivo data of the GFM was also performed. The elucidation of the isolate degradation product in alkaline conditions was performed by IR, 1H, 13C and correlation (COSY, HSQC and HMBC) NMR, and mass spectrometry (MS). Cytotoxicity, phototoxicity, genotoxicity and photogenotoxicity studies were carried out for the toxicity knowledge of the analyzed products.