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Excited-State Dynamics in Open-Shell Molecules / Dynamique des états excités dans des molécules à couche ouverte / Dynamik angeregter Zustände in offenschaligen MolekülenRöder, Anja 10 July 2017 (has links)
Dans cette thèse, la dynamique des états excités des radicaux et biradicaux a été examinée en utilisant la spectroscopie pompe-sonde résolu en temps à l'échelle femto-seconde. Les molécules à couche ouverte jouent un rôle primordial comme intermédiaires dans les processus de combustions, dans la formation de la suie et des hydrocarbures aromatiques polycycliques, dans la chimie atmosphérique ou dans la formation des molécules organiques complexes dans le milieu interstellaire et dans les nuages galactiques. Dans tous ces processus les molécules sont souvent excitées, soit par échauffement thermique, soit par irridation. En conséquence la réactivité et la dynamique de ces états excités sont particulièrement intéressantes afin d'obtenir une compréhension globale de ces processus. Les radicaux et biradicaux ont été produits par pyrolyse à partir de molécules précurseur adaptées et ont été examinés dans un jet moléculaire dans des conditions sans collisions. Les radicaux ont ensuite été portés dans un état excité bien défini, et ionisés avec un deuxième laser. La spectrométrie de masse à temps de vol permet une première identification de la molécule qui est complété avec des spectres de photoélectrons, si le spectre de masse ne montre majoritairement qu'une seule masse. Les spectres de photoélectron ont été obtenus par l'imagerie de vitesse, permettant d'obtenir des informations sur l'état électronique au moment de l'ionisation des électrons. L'imagerie de vitesse des ions permets de distinguer des ions issu d'une ionisation directe et ceux issu d'une ionisation dissociative. Pendant cette thèse un algorithme modifié de pBasex a été développé et implémenté en python, un algorithme qui inverse des images sans interpolation des points expérimentaux. Pour des images bruitées cet algorithme montre une meilleure performance. / In this thesis the excited-state dynamics of radicals and biradicals were characterized with femto-second pump-probe spectroscopy. These open-shell molecules play important roles as combustion intermediates, in the formation of soot and polycyclic aromatic hydrocarbons, in atmospheric chemistry and in the formation of complex molecules in the interstellar medium and galactic clouds. In these processes molecules frequently occur in some excited state, excited either by thermal energy or radiation. Knowledge of the reactivity and dynamics of these excited states complete our understanding of these complex processes. These highly reactive molecules were produced via pyrolysis from suitable precursors and examined in a molecular beam under collision-free conditions. A first laser now excites the molecule, and a second laser ionizes it. Time-of-flight mass spectrometry allowed a first identification of the molecule, which was completed by the photoelectron spectrum. The photoelectron spectrum was obtained via velocity-map imaging, providing an insight in the electronic states involved. Ion velocity map imaging allowed separation of signal from direct ionization of the radical in the molecular beam and dissociative photoionization of the precursor. During this thesis a modified pBasex algorithm was developed and implemented in python, providing an image inversion tool without interpolation of data points. Especially for noisy photoelectron images this new algorithm delivers better results. / In der vorliegenden Dissertation wurde die Dynamik angeregter Zustände von Radikalen und Biradikalen mittels femtosekunden-zeitaufgelöster Anrege-Abfragespektroskopie untersucht. Radikale und Biradikale sind nicht nur wichtige Zwischenprodukte in Verbrennungsprozessen, sondern auch bei der Bildung von Ruß und polyzyklischen aromatischen Kohlenwasserstoffen beteiligt. Des Weiteren spielen sie eine wichtige Rolle in der Atmosphärenchemie und bei der Bildung komplexer Moleküle im interstellaren Medium. Von entscheidender Bedeutung ist in den genannten Prozessen die Anregung der Radikalen und Biradikale in energetisch höhere Zustände, dies geschieht entweder durch thermische Energie oder mittels Strahlung. Für das Verständnis der ablaufenden Vorgänge ist es zwingend erforderlich die Dynamik der angeregten zu verstehen. Die Radikale und Biradikale wurden dafür mittels Pyrolyse eines geeigneten Vorläufers erzeugt, und anschließend unter kollisionsfreien Bedingungen im Molekularstrahl spektroskopisch untersucht. Hierbei regt ein erster Laser das Molekül an, ein zweiter Laser ionisiert es. Mittels Flugzeitmassenspektrometrie wurden die Moleküle identifiziert, und mittels Photoelektronenspektroskopie weiter charackterisiert - unter der Bedingung, dass im Massenspektrum eine Masse dominiert. Das Photoelektronenspektrum wurde mittels Velocity-Map Imaging aufgenommen und gibt einen Einblick in den elektronischen Zustand im Augenblick der Ionisations. Die Velocity-Map Imaging-Technik von Ionen erlaubt außerdem die Unterscheidung von Ionen aus direkter Ionisation und dissoziativer Photoionisation. In diesem Rahmen wurde auch ein modifizierter pBasex-Algorithmus entwickelt und in Python implementiert. Dieser kommt im Gegensatz zum herkömmlichen pBasex-Algorithmus komplett ohne Interpolation der Datenpunkte aus. Besonders bei verrauschten Photoelektronenspektren liefert dieser Algorithmus bessere Ergebnisse.
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Prediction Of Optical Properties Of Pi-conjugated Organic Materials For Technological InnovationsNayyar, Iffat 01 January 2013 (has links)
Organic π-conjugated solids are promising candidates for new optoelectronic materials. The large body of evidence points at their advantageous properties such as high charge-carrier mobility, large nonlinear polarizability, mechanical flexibility, simple and low cost fabrication and superior luminescence. They can be used as nonlinear optical (NLO) materials with large two-photon absorption (2PA) and as electronic components capable of generating nonlinear neutral (excitonic) and charged (polaronic) excitations. In this work, we investigate the appropriate theoretical methods used for the (a) prediction of 2PA properties for rational design of organic materials with improved NLO properties, and (b) understanding of the essential electronic excitations controlling the energy-transfer and charge-transport properties in organic optoelectronics. Accurate prediction of these electro-optical properties is helpful for structureactivity relationships useful for technological innovations. In Chapter 1 we emphasize on the potential use of the organic materials for these two applications. The 2PA process is advantageous over one-photon absorption for deep-tissue fluorescence microscopy, photodynamic therapy, microfabrication and optical data storage owing to the three-dimensional spatial selectivity and improved penetration depth in the absorbing or scattering media. The design of the NLO materials with large 2PA cross-sections may reduce the optical damage due to the use of the high intensity laser beams for excitation. The organic molecules also possess self-localized excited states which can decay radiatively or nonradiatively to form excitonic states. This suggests the use of these materials in the electroluminescent devices such as light-emitting diodes and photovoltaic cells through the processes of exciton formation or dissociation, respectively. It is therefore necessary to understand ultrafast relaxation processes required in understanding the interplay between the iv efficient radiative transfer between the excited states and exciton dissociation into polarons for improving the efficiency of these devices. In Chapter 2, we provide the detailed description of the various theoretical methods applied for the prediction as well as the interpretation of the optical properties of a special class of substituted PPV [poly (p-phenylene vinylene)] oligomers. In Chapter 3, we report the accuracy of different second and third order time dependent density functional theory (TD-DFT) formalisms in prediction of the 2PA spectra compared to the experimental measurements for donor-acceptor PPV derivatives. We recommend a posteriori Tamm-Dancoff approximation method for both qualitative and quantitative analysis of 2PA properties. Whereas, Agren's quadratic response methods lack the double excitations and are not suitable for the qualitative analysis of the state-specific contributions distorting the overall quality of the 2PA predictions. We trace the reasons to the artifactual excited states above the ionization threshold. We also study the effect of the basis set, geometrical constraints and the orbital exchange fraction on the 2PA excitation energies and cross-sections. Higher exchange (BMK and M05-2X) and range-separated (CAM-B3LYP) hybrid functionals are found to yield inaccurate predictions both quantitatively and qualitatively. The failure of the exchangecorrelation (XC) functionals with correct asymptotic is traced to the inaccurate transition dipoles between the valence states, where functionals with low HF exchange succeed. In Chapter 4, we test the performance of different semiempirical wavefunction theory methods for the prediction of 2PA properties compared to the DFT results for the same set of molecules. The spectroscopic parameterized (ZINDO/S) method is relatively better than the general purpose parameterized (PM6) method but the accuracy is trailing behind the DFT methods. The poor performances of PM6 and ZINDO/S methods are attributed to the incorrect description of excited-to-excited state transition and 2PA energies, respectively. The different v semiempirical parameterizations can at best be used for quantitative analysis of the 2PA properties. The ZINDO/S method combined with different orders of multi-reference configuration interactions provide an improved description of 2PA properties. However, the results are observed to be highly dependent on the specific choice for the active space, order of excitation and reference configurations. In Chapter 5, we present a linear response TD-DFT study to benchmark the ability of existing functional models to describe the extent of self-trapped neutral and charged excitations in PPV and its derivative MEH-PPV considered in their trans-isomeric forms. The electronic excitations in question include the lowest singlet (S1) and triplet (T1 † ) excitons, positive (P+ ) and negative (P- ) polarons and the lowest triplet (T1) states. Use of the long-range-corrected DFT functional, such as LC-wPBE, is found to be crucial in order to predict the physically correct spatial localization of all the electronic excitations in agreement with experiment. The inclusion of polarizable dielectric environment play an important role for the charged states. The particlehole symmetry is preserved for both the polymers in trans geometries. These studies indicate two distinct origins leading to self-localization of electronic excitations. Firstly, distortion of molecular geometry may create a spatially localized potential energy well where the state wavefunction self-traps. Secondly, even in the absence of geometric and vibrational dynamics, the excitation may become spatially confined due to energy stabilization caused by polarization effects from surrounding dielectric medium. In Chapter 6, we aim to separate these two fundamental sources of spatial localization. We observe the electronic localization of P + and Pis determined by the polarization effects of the surrounding media and the character of the DFT functional. In contrast, the self-trapping of the electronic wavefunctions of S1 and T1(T1 † ) mostly follows their lattice distortions. Geometry vi relaxation plays an important role in the localization of the S1 and T1 † excitons owing to the nonvariational construction of the excited state wavefunction. While, mean-field calculated P + , Pand T1 states are always spatially localized even in ground state S0 geometry. Polaron P+ and Pformation is signified by the presence of the localized states for the hole or the electron deep inside the HOMO-LUMO gap of the oligomer as a result of the orbital stabilization at the LCwPBE level. The broadening of the HOMO-LUMO band gap for the T1 exciton compared to the charged states is associated with the inverted bond length alternation observed at this level. The molecular orbital energetics are investigated to identify the relationships between state localization and the corresponding orbital structure. In Chapter 7, we investigate the effect of various conformational defects of trans and cis nature on the energetics and localization of the charged P + and Pexcitations in PPV and MEHPPV. We observe that the extent of self-trapping for P+ and Ppolarons is highly sensitive on molecular and structural conformations, and distribution of atomic charges within the polymers. The particle-hole symmetry is broken with the introduction of trans defects and inclusion of the polarizable environment in consistent with experiment. The differences in the behavior of PPV and MEH-PPV is rationalized based on their orbital energetics and atomic charge distributions. We show these isomeric defects influence the behavior and drift mobilities of the charge carriers in substituted PPVs.
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Spectroscopic Investigation of the Excited State Properties of Platinum(Ii) Charge Transfer ChromophoresGlik, Elena A. 25 November 2009 (has links)
No description available.
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Propriedades ópticas não-lineares de oligômeros de anilina / Nonlinear optical properties of aniline oligomersFranzen, Paulo Licênio 29 October 2002 (has links)
Apresentamos os resultados do estudo das não-linearidades ópticas de origem eletrônica de duas moléculas da classe dos oligômeros de anilina: o dímero e o tetrâmero. Foram medidas quatro concentrações de tetrâmero, puras e também dopadas em 33 e 100%; uma de dímero pura e outra dopada em 100%. As soluções foram preparadas usando dimetil-sulfóxido (DMSO) como solvente e a dopagem foi realizada com ácido clorídrico. As amostras foram caracterizadas por medidas de absorção linear e fluorescência antes das medidas não-lineares. Obtivemos os valores da primeira hiperpolarizabilidade (?) para todas as amostras, o índice de refração não-linear (n2) do tetrâmero dopado e não dopado, e a absorção não-linear em função da intensidade e da concentração do tetrâmero. As medidas foram realizadas através das técnicas de Varredura-Z, absorção não-linear e espalhamento Hiper-Rayleigh. Os resultados foram interpretados em termos da comparação entre diferentes estados de dopagem e da variação da seção de choque do estado fundamental para o primeiro excitado. / We report on the study of electronic optical non linearities in two aniline oligomers: dimer and the tetramer. Four tetramer concentrations were measured, pure and also 33 and 100% doped; one of dimer non doped another 100% doped. The solutions were prepared using dimethyl sulfoxide (DMSO) as solvent and the doping was performed with hydrochloric acid. The samples were characterized by measurements of linear absorption and fluorescence. We obtained the values of the first hyperpolarizability (?) for all samples, the non linear index of refraction (n2) for non doped and doped tetramer, and the non linear absorption in function of intensity and concentration of the tetramer. The measurements were accomplished through the techniques of Z-Scan, non linear absorption and Hyper-Rayleigh Scattering. The results were interpreted in terms of the comparison among different doping states and of the variation of cross-section for the transition from ground to the first excited states.
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Chaînes peptidiques modèles en détente supersonique : refroidissement conformationnel, structures et dynamique des états excités étudiés par modélisation Monte-Carlo, spectroscopies laser et chimie quantique / Supersonic expansion of model peptides : conformational cooling, structures and excited states dynamics studied by Monte-Carlo methods, laser spectroscopy and quantum chemistryLoquais, Yohan 10 July 2013 (has links)
Cette thèse présente une étude expérimentale et théorique de petites chaines peptidiques modèles en phase gazeuse. Le premier objectif de ce travail consistait à déterminer les conformations préférentiellement adoptées par ces molécules isolées, en vue d’obtenir des informations sur les interactions intra- et inter-moléculaires intervenant dans ces systèmes flexibles. La stratégie expérimentale utilisée associait la vaporisation laser à une détente supersonique et reposait sur la spectroscopie laser de double résonance IR-UV. L’attribution finale des structures a ensuite été réalisée par comparaison des spectres expérimentaux à des spectres issus de calculs de chimie quantique au niveau DFT-D. Dans un deuxième temps, il s’agissait d’étudier la dynamique de relaxation électronique de ces systèmes par spectroscopie pompe-sonde et mesures de fluorescence, et en particulier la dépendance de celle-ci avec la structure secondaire des peptides modèles. La question de la population conformationnelle de molécules flexibles en phase gazeuse est un sujet délicat et bien souvent éludée car les distributions observées expérimentalement résultent d’un passage hors équilibre lors de la détente supersonique, définissant ainsi une température conformationnelle effective. Un modèle statistique a été développé, décrivant le refroidissement et les isomérisations subis durant la détente par une molécule. Les résultats de ces modélisations reproduisent les tendances d’évolution des rapports d’abondances entre conformations observés expérimentalement et permettent de fournir des ordres de grandeurs relatifs aux processus mis en jeu (nombre de collisions efficaces, trajectoire dans la détente après désorption, températures finales) ainsi qu’une meilleure compréhension des processus de refroidissement et de relaxation conformationnelle. Les études conformationnelles ont été appliquées à deux systèmes modèles choisis pour étudier des interactions structurantes intervenant dans les protéines : les interactions protéines-solvant et les interactions hydrophobes. L’étude des complexes (AcPheNH₂ : H₂O) et (AcPheNHMe : H₂O) ont permis d’identifier les sites de solvatation préférentiellement occupés par une molécule d’eau et ainsi de proposer des mécanismes de formation des complexes dans la détente supersonique. Le rôle structurant très fort des interactions hydrophobes entre chaînes latérales aromatiques a pu être mis en évidence en étudiant deux peptides modèles contenant un enchainement de plusieurs acides aminés phénylalanine : AcPhePheNH₂ et AcPhePhePheNH₂. L’étude des dynamiques de relaxation du premier état excité ππ*, réalisée sur divers peptides modèles, a permis de démontrer la présence d’effets conformationnels importants. Des calculs de chimie quantique (TDDFT et CC2) réalisés sur les systèmes Ac-Phe NH₂ et Ac-Phe NHMe ont montré que cet effet pouvait être expliqué par un transfert d’excitation depuis le cycle aromatique présent sur la chaîne latérale vers les liaisons peptidiques de la chaine principale. Enfin, l’ajout d’une molécule d’eau sur le peptide Ac-Phe NH₂ semble ouvrir de nouvelles voies ultrarapides de relaxation non-radiative. / The very good spectral resolution of laser spectroscopy achieved in the gas phase is a powerful tool to study the folding properties and the hydrogen bonding network of flexible molecules such as small peptide chains. The experimental strategy used in this work to determine the structural properties of these systems is based on IR-UV double resonance spectroscopy and combines laser vaporisation with a supersonic expansion. The final assignment then requires a comparison between experimental spectra and DFT-D calculations. The conformational selectivity brought by gas phase laser spectroscopy also makes it possible to study the dependence of the dynamics of relaxation of electronic excited states of model peptides with their secondary structure by using pump-probe methods or fluorescence detection. The issue of the conformational population of flexible molecules cooled in a supersonic expansion is a difficult issue, often disregarded due to the nonequilibrium processes that control the distributions experimentally observed. A statistical model was developed in order to describe this collisional cooling and the isomerizations experienced by one molecule during the expansion. These calculations were consistent with the experimental trends in the population ratios between conformations, they have provided orders of magnitude for the different processes involved (number of collision, trajectory in the expansion after desorption, final temperatures) and a better understanding of the cooling processes and the conformational relaxation. The conformational studies have been applied to two model systems selected to investigate structural interactions involved in proteins: protein-solvent interactions and hydrophobic interactions. The microhydrated protected phenylalanines (AcPheNH₂ : H₂O) and (AcPheNHMe : H₂O) were used to locate the solvation sites preferentially occupied by a water molecule, which then helped to propose a mechanism for the formation of hydrates in the supersonic expansion. The strong structuring properties of hydrophobic interactions between aromatic side chains has been revealed by studying two model peptides containing a sequence of phenylalanine amino acids: AcPhePheNH₂ and AcPhePhePheNH₂. A comparative study of the relaxation dynamics of the first ππ* excited state performed on various model peptides has demonstrated the existence of a strong conformational effect. TDDFT and CC2 calculations carried out on the protected phenylalanines have shown that this effect could be explained by an excitation transfer from the aromatic ring of a side chain toward a peptide bond of the backbone. Finally, adding a water molecule to the protected phenylalanine is also found to open new ultrafast channels of nonradiative deactivation.
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Core Level Spectroscopy of Water and IceNordlund, Dennis January 2004 (has links)
A core level spectroscopy study of ice and water is presented in this thesis. Combining a number of experiments and spectrum calculations based on density functional theory, changes in the local valence electronic structure are shown to be sensitive to the local H-bonding configurations. Exploiting this sensitivity, we are able to approach important scientific problems for a number of aggregation states; liquid water, the water-metal interface, bulk and surface of hexagonal ice. For the H-bonded model system hexagonal ice, we have probed the occupied valence electronic structure by x-ray emission and x-ray photoelectron spectroscopy. Stepwise inclusion of different types of interactions within density functional theory, together with a local valence electron population analysis, show that it is essential to include intermolecular charge transfer together with internal s-p rehybridizations in order to describe the changes in electronic structure seen in the experiment. The attractive electrostatic interaction between water molecules is enhanced by a decrease in Pauli repulsion. A simple electrostatic model due to charge induction from the surrounding water is unable to explain the electronic structure changes. By varying the probing depth in x-ray absorption the structure of the bulk, subsurface and surface regions is probed in a thin ice film. A pronounced continuum for fully coordinated species in the bulk is in sharp contrast to the spectrum associated with a broken symmetry at the surface. In particular molecular arrangements of water with one uncoordinated OH group have unoccupied electronic states below the conduction band that are responsible for a strong anisotropic pre-edge intensity in the x-ray absorption spectrum. The topmost layer is dominated by an almost isotropic distribution of these species, which is inconsistent with an unrelaxed surface structure. For liquid water the x-ray absorption spectrum resembles that of the ice surface, indicating a domination of species with broken hydrogen bond configurations. The sensitivity to the local hydrogen bond configuration, in particular the sensitivity to broken bonds on the donor side, allows for a detailed analysis of the liquid water spectrum. Most molecules in liquid water are found in two-hydrogen-bonded configurations with one strong donor and one strong acceptor hydrogen bond. The results, consistent with diffraction data, imply that most molecules are arranged in strongly H-bonded chains or rings embedded in a disordered cluster network. Molecular dynamics simulations are unable to describe the experimental data. The water overlayer on the close-packed platinum surface is studied using a combination of core-level spectroscopy and density functional theory. A new structure for water adsorption on close-packed transition metal surfaces is found, where a weakly corrugated non-dissociated overlayer interacts via alternating oxygen-metal and hydrogen-metal bonds. The latter results from a balance between metal-hydrogen bond formation and OH bond weakening. The ultrashort core-hole lifetime of oxygen provides a powerful probe of excited state dynamics via studies of the non-radiative or radiative decay following x-ray absorption. Electrons excited into the pre-edge state for single donor species at the ice surface remain localized long enough for early time solvation dynamics to occur and these species are suggested as strong pre-existing traps to the hydrated electron. Fully coordinated molecules in the bulk contribute to a strong conduction band with electron transfer times below 0.5 femtoseconds. Upon core-ionization, both protons are found to migrate substantial distances on a femtosecond timescale. This unusually fast proton dynamics for non-resonant excitation is captured both by theory and experiment with a measurable isotope effect.
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Propriedades ópticas não-lineares de oligômeros de anilina / Nonlinear optical properties of aniline oligomersPaulo Licênio Franzen 29 October 2002 (has links)
Apresentamos os resultados do estudo das não-linearidades ópticas de origem eletrônica de duas moléculas da classe dos oligômeros de anilina: o dímero e o tetrâmero. Foram medidas quatro concentrações de tetrâmero, puras e também dopadas em 33 e 100%; uma de dímero pura e outra dopada em 100%. As soluções foram preparadas usando dimetil-sulfóxido (DMSO) como solvente e a dopagem foi realizada com ácido clorídrico. As amostras foram caracterizadas por medidas de absorção linear e fluorescência antes das medidas não-lineares. Obtivemos os valores da primeira hiperpolarizabilidade (?) para todas as amostras, o índice de refração não-linear (n2) do tetrâmero dopado e não dopado, e a absorção não-linear em função da intensidade e da concentração do tetrâmero. As medidas foram realizadas através das técnicas de Varredura-Z, absorção não-linear e espalhamento Hiper-Rayleigh. Os resultados foram interpretados em termos da comparação entre diferentes estados de dopagem e da variação da seção de choque do estado fundamental para o primeiro excitado. / We report on the study of electronic optical non linearities in two aniline oligomers: dimer and the tetramer. Four tetramer concentrations were measured, pure and also 33 and 100% doped; one of dimer non doped another 100% doped. The solutions were prepared using dimethyl sulfoxide (DMSO) as solvent and the doping was performed with hydrochloric acid. The samples were characterized by measurements of linear absorption and fluorescence. We obtained the values of the first hyperpolarizability (?) for all samples, the non linear index of refraction (n2) for non doped and doped tetramer, and the non linear absorption in function of intensity and concentration of the tetramer. The measurements were accomplished through the techniques of Z-Scan, non linear absorption and Hyper-Rayleigh Scattering. The results were interpreted in terms of the comparison among different doping states and of the variation of cross-section for the transition from ground to the first excited states.
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Applying Fundamental Photochemistry to Drive Drug Development: The Photo-Dynamics and Reactions of Sulfur-Substituted Nucleic AcidsPollum, Marvin 08 February 2017 (has links)
No description available.
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Excited state dynamics of carotenoids in solution and proteins / Excited state dynamics of carotenoids in solution and proteinsCHÁBERA, Pavel January 2010 (has links)
Time resolved spectroscopy is one of the crucial methods used to study processes on molecular level in biological systems. It is useful especially for monitoring fast processes that take a place in photosynthetic apparatus of photosynthetic organisms, such as electron and energy transfer. The integral parts of photosynthetic apparatus are carotenoids, whose role in the photosynthetic apparatus is not as well explored as it is for chlorophylls. It was proved that carotenoids actively participate in energy transfer processes in photosynthetic antennas. They have a crucial role in protection against excess energy damage. They are also electron donors in both antennas and reaction centers. The fact that photo-physical properties of carotenoids are much different from properties of others organic pigments, complicates studies of their functions in photosynthesis as well as in other biological systems. This thesis employs advanced methods of femtosecond spectroscopy to obtain more information about carotenoid functions in some biological systems and in solution with special focus on carotenoids containing carbonyl group.
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