The Eastern Cape Karoo region is semi-arid with highly variable rainfall. This variability in rainfall sustains a mosaic of surface freshwater bodies that range from permanently to temporarily inundated. These waterbodies provide habitats for diverse invertebrate assemblages. The imminent hydraulic fracturing for shale gas has a potential to modify the water regime, with particular risk of salinisation. Accumulation of salts in freshwater wetlands results in loss of biodiversity, as invertebrate species shift from salt intolerant to salt tolerant species. This study therefore aims to expand on existing knowledge and provide new information on the distribution, diversity and structure of macroinvertebrate assemblages associated with various freshwater bodies in the region prior to shale gas exploration. Limnological and ecological aspects of thirty-three waterbodies (rivers, dams and depression wetlands) were investigated between November 2014 and March 2016. An experimental study on the effects of salinity on hatching success of branchiopod resting eggs was also included in the research. Rivers were characterised by high conductivity and depression wetlands by high turbidity, while dams had relatively higher pH than the other two waterbody types. In terms of global phosphorus interpretation guidelines, the results indicate that freshwater systems in the study region are predominantly eutrophic, indicating that agricultural run-off, particularly from livestock dung (goats, cattle and sheep), is an important source of phosphorus in the freshwater systems studied. Our results revealed new distribution records for branchiopod crustaceans in the Eastern Cape region, including the first record of Laevicaudata. Results showed that the sampled variables were unable to explain the variation in physicochemistry and invertebrate assemblage of several sites. Waterbody type, whether a depression wetland or a river, was the only factor that consistently showed an effect on the composition of both physicochemical data and invertebrate data. Depression wetlands ranged from completely bare to being extensively covered by macrophytes. Therefore, the effect of macrophyte cover in structuring macroinvertebrate assemblages was the focus of further investigation. The results indicated that the macrophyte cover gradient had little influence on the structure of the invertebrate assemblages in the depression wetlands, while only the presence/absence of vegetation significantly influenced the structure of the invertebrate assemblages in these systems. Surface area, dissolved inorganic nitrogen and pelagic chlorophyll-a were the environmental variables that best explained the variation in the macroinvertebrate assemblages among the sites. However, the differences in macroinvertebrate richness, abundance and distribution patterns among sites were only weakly influenced by local and regional environmental factors. These findings suggest that invertebrate in temporary wetland systems are adapted to the highly variable nature of temporary habitats, thus the influence of local variables is negligible. Results of the experimental study, on the effect of salinity on hatching success of branchiopod resting eggs, revealed that hatchling abundance and diversity of large branchiopods was significantly reduced at salinities of 2.5 g L−1 and above. Salt-tolerant taxa such as Copepoda and Ostracoda were the only ones to emerge in the highest salinity of 10 g L−1. Thus, should the region continue to experience increasing aridity and possible shale gas development, which all aggravate the salinisation problem, severe loss of branchiopod diversity (Anostraca, Laevicaudata, Spinicaudata and Notostraca) is likely to occur. This may lead to considerable decline in invertebrate diversity in the region, with cascading effects on food webs and ecosystem functions. The findings of this study can potentially be used in comparative studies on wetland invertebrate ecology in other semi-arid regions and in the formulation of policy and strategies for biodiversity conservation.

A micologia marinha é uma ciência relativamente recente e pouco se conhece sobre a diversidade das suas comunidades. Assim, o isolamento, triagem e preservação de fungos derivados do mar podem levar à descoberta de novas tecnologias. O objetivo deste estudo foi conhecer a diversidade de fungos filamentosos derivados marinhos e selecionar isolados capazes de produzir enzimas celulolíticas. Para tanto, foram isolados seletivamente fungos filamentosos a partir de amostras de macro-organismos marinhos coletados em 2007 e 2008. Os resultados demonstraram uma ampla diversidade de fungos potencialmente celulolíticos, pertencentes ao filo Basidiomycota e Ascomycota. Nos experimentos de produção de celulases, 17 apresentaram resultados satisfatórios de CMCase e FPase e foram selecionados para a avaliação da Celobiase. Os experimentos de cinética enzimática apresentaram os melhores resultados de produção de celulases em meio contendo farelo de trigo. O trabalho demonstra o potencial para aplicação biotecnológica dos fungos e estimula novos estudos com as celulases. / The Marine mycology is a relatively recent and little is known about the diversity of its communities. Thus, the isolation, separation and preservation of fungi derived from the sea can lead to the discovery of new technologies. The aim of this study was the diversity of filamentous fungi isolates derived marine and select capable of producing cellulolytic enzymes. It had been selectively isolated filamentous fungi from samples of marine macro-organisms collected in 2007 and 2008. The results showed a wide range of potential cellulolytic fungi, belonging to the phylum Basidiomycota and Ascomycota. In the experiments to produce cellulases, 17 had satisfactory results of CMCase and FPase and were selected for evaluation of cellobiase. The enzyme kinetics experiments showed better results for the production of cellulases in a medium containing wheat bran. The work demonstrates the potential for biotechnological application of fungi and stimulate further research with cellulases.

The ability to learn and change future behaviour based on past experiences is crucial for the life and survival of animals. For various behaviours exhibited by animals it is clear that in a seemingly homogeneous population not all individuals behave the same way, even in invertebrates. In crickets (Gryllus bimaculatus), a model system for the mechanisms of intra-specific aggression, agonistic experiences with the underlying impact of neuromodulators have been identified as a cause of inter-individual differences. For mammals and humans, the experience of adversity and stress can have detrimental effects on cognitive abilities and chronic defeat stress is used as a model for depression. In crickets the equivalent, the chronic social defeat stress paradigm, has been established. This thesis first sets out to construct a new model for measuring a conditioned response from multiple behavioural aspects and quantify learning in individual crickets. Video tracking of responses revealed behavioural variables that were included in a binary logistic regression analysis, whereas the resulting multi-variable model proves to be superior to other models constructed and can give the probability of an individual exhibiting a conditioned response. With this, learning indices can be calculated for each individual trained in a differential appetitive olfactory paradigm. With the method at hand, this thesis reveals that the experience of chronic social stress impairs learning in crickets, susceptible and resilient to defeat stress alike. The experience of multiple wins, however, does neither improve nor decrease learning abilities, but a long-term winner effect on aggression could be shown. Although inter-individual differences in learning are present, the aggressive state of crickets is not correlated to the learning indices. The application of serotonergic drugs that block receptors or act as re-uptake inhibitors reveal the influence of serotonin on learning within this paradigm. In addition to maintaining reduced aggressiveness, serotonin promotes the impairment of learning after the experience of chronic social defeat stress.:1 INTRODUCTION.....................................................................................................1 2 MATERIALS AND METHODS............................................................................... 8 2.1 Experimental animals...................................................................................... 8 2.2 Appetitive olfactory conditioning..................................................................... 8 2.2.1 Odour application and rewarding....................................................... 8 2.2.2 Absolute conditioning paradigm........................................................ 10 2.2.3 Differential conditioning paradigm.................................................... 11 2.3 Experimental setup for video-tracking.............................................................. 12 2.4 Binary logistic regression model....................................................................... 13 2.4.1 Binary groups for model building...................................................... 13 2.4.2 Variables of a behavioural response................................................... 14 2.4.3 Calculating a conditioned odour response probability (Presp) ............ 15 2.5 Evaluation of learning with the binary logistic model...................................... 17 2.6 Evaluation of aggression with a standardised fight.......................................... 18 2.7 Multiple agonistic experiences......................................................................... 19 2.7.1 Chronic social defeat stress................................................................ 19 2.7.2 Multiple wins..................................................................................... 20 2.8 Serotonin......................................................................................................... 20 2.8.1 Pharmacological treatments............................................................... 20 2.8.2 Methiothepin and ketanserin.............................................................. 21 2.8.3 Fluoxetine with non-chronic defeat................................................... 21 2.9 Additional data analysis and statistic................................................................ 22 3 RESULTS............................................................................................................ 23 3.1 Binary logistic regression model for quantifying learning............................... 23 3.1.1 Behavioural variables of a conditioned odour response.................... 23 3.1.2 Model building and selection............................................................. 29 3.1.3 Odour response probabilities (Presp)................................................... 31 3.1.4 Application of the regression model to assess the quantification of learning.................................................................................................... 34 3.2 The influence of agonistic experiences on aggression and learning................. 39 3.2.1 Chronic social defeat stress................................................................ 39 3.2.2 Multiple experiences of winning........................................................ 46 3.2.3 Correlation of aggression and learning............................................... 48 3.2.4 Summary of learning capacities – multiple experiences.................... 50 3.3 The influence of serotonergic drugs on learning after chronic defeat.............. 51 3.3.1 Methiothepin and ketanserin.............................................................. 51 3.3.2 Fluoxetine........................................................................................... 57 3.3.3 Summary of learning capacities – chronic defeat and serotonin........ 60 4 DISCUSSION....................................................................................................... 63 4.1 The semi-automated measurement of olfactory learning in individually assayed crickets................................................................................................................... 64 4.2 The influence of multiple agonistic experiences on learning........................... 71 4.3 The role of serotonin in chronic social defeat influenced learning................... 77 4.4 Overall conclusion and outlook........................................................................ 80 5 SUMMARY........................................................................................................... 82 6 ZUSAMMENFASSUNG........................................................................................ 87 7 REFERENCES.................................................................................................... 93 8 APPENDIX................................................................................................... 106 8.1 Figures and tables................................................................................... 106 8.2 Publications and published abstracts....................................................... 108 8.3 Curriculum vitae....................................................................................... 109 8.4 Acknowledgements.................................................................................. 111

Thesis (M.Sc. (Zoology)) -- University of Limpopo, 2017 / In this study data was collected to establish if the water and sediment quality of the Steelpoort River has any effects on macro-invertebrate species. The Steelpoort River is a tributary of the Olifants River system but not much data about the water quality is available. The Steelpoort River is a perennial river (Ashton et al. 2001) situated west of Burgersfort and from there it flows in a north- easterly direction and converges with the Olifants River in the Drakensberg near Kromellenboog. High silt levels in the river, increases the risk of flooding and leads to the smothering of in-stream habitats resulting in loss of some invertebrate and fish species. Sampling of the water, sediment and macroinvertebrates was conducted quarterly at the Steelpoort River at five sites. One site was above the impoundment (De Hoop Dam) and the rest were below the impoundment. A handheld YSI 556™ Multi Probe System (MPS instrument and a Mettler Toledo SevenGo™ conductivity meter were used to measure the physico-chemical characteristics at the sites. The macroinvertebrates were sampled using the SASS 5 bio-assessment protocol (Goodyear & McNeill 1999, Dickens & Graham 2002). Macro-invertebrate samples were collected using a 400 mm x 400 mm SASS net with a 250 μm mesh size. The substrate was disturbed for a period of two minutes to free macro-invertebrates from the substrate. The SASS score for each site was evaluated in the field for three of the five samples. The macro-invertebrate samples were preserved in 70% ethanol and sorted to family level in the University of Limpopo’s Biodiversity laboratory. For the majority of the physico-chemical parameters the most elevated were detected downstream and lowest concentrations were detected upstream. Analysis of variance (ANOVA) indicated that there were no significant differences for electrical conductivity, salinity, and TDS, between the sites (p>0.05). There were however significant differences in the temperature, dissolved oxygen, turbidity, and pH concentrations (p<0.05). The majority of the metals and metalloids in the water (Fe, Mn, V, Co, Zn, Ba, and Cu) were highest at Tiershoek (Site1) and lowest at Steelpoort (Site 4) and Burgersfort Bridge (Site 5).The mean metal concentrations collected showed elevated levels for chromium, copper and zinc, which were above the CCME sediment guidelines. The most abundant macroinvertebrates were from the family Ephemeroptera which are pollution sensitive and good indicators of pollution in aquatic ecosystems. When using the interpretation of the SASS 5 results from Chutter 1995, the mean Average Score Per Taxa (ASPT) scores show that the water quality for Tiershoek (Site 1) and Polopark (Site 3) is natural but the habitat diversity has been reduced. For De Hoop (Site 2) and Steelpoort (Site 4), the mean ASPT score shows that there is some deterioration in the water quality. Finally, for Burgersfort Bridge (Site 5), the mean ASPT score indicates that there is major deterioration in the water quality. Primer statistical analysis indicated that the average dissimilarity between sites showed that the highest dissimilarity was between Tiershoek (Site 1) and Burgersfort Bridge (Site 5) which was conclusive with the results from the macro-invertebrate count and SASS, indicating that there is diverse difference from upstream to downstream. CCA indicated positive correlations between nutrients detected at Steelpoort with Athericidae, Tabanidae, Gomphidae, Baetidae, Elmidae, Planaria, Psephenidae, and Libellulidae which was indicated that water chemistry characteristics exert influence on macroinvertebrates. The results showed that there is degradation of the water quality in river from upstream to downstream with more pollution tolerant species being abundant at Steelpoort (Site 4) and Burgersfort Bridge (Site 5). The most favourable season was autumn and the least summer/spring and this may be attributed to the life cycle of the macro-invertebrate communities / NRF VLIR

No description available.

Numerous invertebrates have contributed to our understanding of the biology of learning and memory. In most cases, learning performance is documented for groups of individuals, and nearly always based on a single, typically binary, behavioural metric for a conditioned response. This is unfortunate for several reasons. Foremost, it has become increasingly apparent that invertebrates exhibit inter-individual differences in many aspects of their behaviour, and also that the conditioned response probability for an animal group does not adequately represent the behaviour of individuals in classical conditioning. Furthermore, a binary response character cannot yield a graded score for each individual. We also hypothesise that due to the complexity of a conditioned response, a single metric need not reveal an individual’s full learning potential. In this paper, we report individual learning scores for freely moving adult male crickets (Gryllus bimaculatus) based on a multi-factorial analysis of a conditioned response. First, in an absolute conditioning paradigm, we video-tracked the odour responses of animals that, in previous training, received either odour plus reward (sugar water), reward alone, or odour alone to identify behavioural predictors of a conditioned response. Measures of these predictors were then analysed using binary regression analysis to construct a variety of mathematical models that give a probability for each individual that it exhibited a conditioned response (Presp). Using standard procedures to compare model accuracy, we identified the strongest model which could reliably discriminate between the different odour responses. Finally, in a differential appetitive olfactory paradigm, we employed the model after training to calculate the Presp of animals to a conditioned, and to an unconditioned odour, and from the difference a learning index for each animal. Comparing the results from our multi-factor model with a single metric analysis (head bobbing in response to a conditioned odour), revealed advantageous aspects of the model. A broad distribution of model-learning scores, with modes at low and high values, support the notion of a high degree of variation in learning capacity, which we discuss.

Prescribed fire and herbicides are 2 silviculture tools used by forest managers to control hardwood competition in pine (Pinus spp.) forests. I tested effects of prescribed burning and herbicides on selected invertebrate communities, including carabid beetles, and compared 2 invertebrate sampling approaches in thinned, intensively managed pine stands in Kemper County, Mississippi. I used 6 replicate stands containing 4, 10-ha treatment plots each that were randomly assigned treatments of burn only, herbicide only, burn/herbicide, and control. I suction-sampled invertebrate communities and pitfall trapped carabid beetles to examine treatment responses. Direct effects of burning and overall vegetation response influenced communities most but responses were limited. Sampling inefficiencies may have obscured treatment effects and managers and researchers are advised to consider all available methods when integrating invertebrate research. Information on forest management effects is still lacking but future research incorporating invertebrate sampling will support a better understanding of management impacts on ecosystems.

No description available.

Concentrations of selenium (Se), manganese (Mn), zinc (Zn), cadmium (Cd), lead (Pb) and arsenic (As) were measured in the water column, sediment and biota, in conjunction with selected physicochemical data, from representative wetland types at a mining site within Salt Lake County, Utah, USA. The selected field sites included Oolitic Pond (lentic) and Lee Creek (lotic), which are moderately contaminated brackish, alkaline aquatic wetlands managed by a copper mining industry. These fishless wetlands are located in a geographic region that poses risk to migratory shorebird populations from dietary Se. A spatial sampling study demonstrated the extent of variation in total Se concentration within the wetlands. With the exception of the sediment compartment, Se concentration did not differ significantly along the 2-mile length of Lee Creek or within the Pond. The differences in sediment total Se concentrations between the Creek East and West segments characterize lower Lee Creek as having two segments distinguished by unique processes that influence the sediment Se accumulation profiles. Se accumulation trends were observed temporally over 3-years (2000 to 2002) and over two seasons (spring and autumn). Total Se body burden in benthic invertebrates was more clearly associated with sediment/detritus Se concentrations than with surface water concentrations. Three invertebrate groups dominated the aquatic invertebrates assemblage in the lotic and lentic benthos; primary consumers (Chironomidae, Diptera), generalist feeders (Hemiptera) and predators (Odonata). The chironomid larvae accumulated 1.3 to 39 times the trace metal concentrations of the Hemiptera or odonate taxa, independent of trace metal type (essential or non-essential) or wetland occupation. Organism-specific factors, such as habitat selection and preferential feeding habits, were proposed to influence benthic invertebrate accumulation profiles by modifying trace metal exposure. Mixed diets, trophic omnivory and the complexity of wetland biogeochemistry limit the power of stable nitrogen fractionation signatures to define benthic food web relationships. Wetland site-specific processes impacted Se accumulating efficiency, with trace metal concentrations from 4 to 7 times greater within the lentic benthic system than the lotic. The fractionation of the natural abundant stable carbon isotopes revealed the importance of sedimentary and detrital organic carbon as dietary sources for the benthic food web. Sediment organic content was not significantly associated with sediment, or invertebrate, Se accumulation profiles. Ecological risk assessments based on sound understanding of metal chemistry and the interactions between the sediment matrix and benthic organisms are necessary to provide tools for environmental management. / Graduation date: 2005

No description available.