Para avaliar a influência dos polimorfismos de nucleotídeo único (SNPs) do CYP2B6, CYP3A5, GSTM1, GSTP1, GSTT1, PON1, NQO1 e MDR1 na resposta ao tratamento com R-CHOP e CHOP, 82 pacientes com Linfoma Difuso de Grandes Células B, sem evidências de infecção por HIV, foram selecionados nesse estudo. Amostras de sangue periférico foram coletadas para extração de DNA. Os SNPs foram analisados por PCR-RFLP. Em relação aos pacientes que apresentaram resposta completa (RC) ao tratamento (70%), 51% foram tratados com R-CHOP. Sobre o tratamento, 50% dos pacientes com RC apresentaram classificação de ECOG 0-1 (p=0,0193) e a maioria desses pacientes (41%) não apresentaram envolvimento extranodal (p=0,0377). Não houve associação entre os SNPs do CYP2B6, CYP3A5, GSTT1, NQO1 e MDR1 (C3435T) e as variáveis estudadas. Apenas CYP3A5 (sexo p=0,0519), GSTM1 (idade p=0,016; tratamento p=0,0372), GSTP1 (envolvimento extranodal p=0,0307), PON1 (sintomas B p=0,0201; Bulky p=0,0148) e MDR1 C1236T (sexo p=0,0316) mostraram associação. Em relação à sobrevida global, apenas tratamento (p=0,0129), IPI (p=0,000342), idade (p=0,0155), estadiamento (p=0,00281) e ECOG (p=0,00869) apresentaram resultados significantes. Quanto à sobrevida livre de doença (SLD), apenas idade (p=0,0292), estadiamento (p=0,0402) e ECOG (p=0,0142) apresentaram resultados significantes / To evaluated the influence of single nucleotide polymorphisms (SNPs) of CYP2B6, CYP3A5, GSTM1, GSTP1, GSTT1, PON1, NQO1 and MDR1 in the treatment response with R-CHOP and CHOP, 82 patients with Diffuse Large B-cell Lymphoma, without evidence of HIV infection, were enrolled in this study. Peripheral blood samples were collected for DNA extraction. The SNPs were analyzed by PCR-RFLP. In relation the patients that showed complete response (CR) to the treatment (70%), 51% were treated with R-CHOP. About the treatment, 50% of the patients with CR showed ECOG classification of 0-1 and the most of these patients (41%) did not showed extranodal involvement (p=0,0377). There was no association between CYP2B6, CYP3A5, GSTT1, NQO1 and MDR1 (C3435T) SNPs and the variables studied. Only CYP3A5 (gender p=0,0519), GSTM1 (age p=0,016; treatment p=0,0372), GSTP1 (extranodal involvement p=0,0307), PON1 (B symptoms p=0,0201; Bulky p=0,0148) e MDR1 C1236T (gender p=0,0316) showed association. In relation to overall survival, only treatment (p=0,0129), IPI (p=0,000342), age (p=0,0155), stadiament (p=0,00281) and ECOG (p=0,00869) showed significant results. To disease-free survival, only age (p=0,0292), stadiament (p=0,0402) e ECOG (p=0,0142) showed significant results

Ziel: Entwicklung eines gesundheitsökonomischen Evaluationskonzepts zum Nachweis einer Kostenreduktion unter gleichzeitiger Optimierung des medizinischen Nutzens durch pharmakogenetisches Screening bei Erstdiagnose einer Schizophrenie. Finale Zielsetzung ist die Aufnahme der pharmakogenetischen a priori-Diagnostik für die Indikation Schizophrenie in die GKV-Regelversorgung. Methodik: Basierend auf dem aktuellen Stand gendiagnostischer Forschung sowie der evidenzbasierten Schizophrenietherapie wurde eine prospektive, randomisierte und kontrollierte, dreiarmige, offene, multizentrische Pilotstudie im Paralleldesign über 3 Jahre konzeptioniert. Studienpopulation: 300 Patienten (1:1:1) im Alter von 18 bis 65 Jahren mit erstmaliger F20-Diagnose (ICD-10). Interventionen: pharmakogenetisches Screening und integrierte Versorgung; integrierte Versorgung; Standardversorgung. Die Erhebung des medizinischen Nutzens erfolgt durch Messung des klinischen Outcome bzgl. der patientenrelevanten Endpunkte Mortalität, Morbidität, Lebensqualität und Nebenwirkungen zu definierten Zeitpunkten. Perspektivisch relevante Kosten werden im "piggy back"-Verfahren ermittelt. Ergebnisse: Angesichts zurzeit bestehender Limitationen im deutschen Gesundheitssystem (z.B. unzureichendes intersektorales Schnittstellenmanagement bei der Arzneimittelversorgung und Informationsweitergabe) wird die Integrierte Versorgung als geeignete Versorgungsform für den Nutzennachweis eingestuft. Die Integrierte Versorgung stellt jedoch momentan nicht den allgemeinen Standard der psychiatrischen Patientenversorgung dar. Aus GKV-Perspektive wesentliche Kostentreiber der Schizophrenietherapie sind Rückfälle, Krankenhausaufenthalte, Arbeitslosigkeit und vorzeitige Verrentung. Eine Verringerung der Häufigkeit dieser Parameter könnte z.B. zu einer Reduktion der Erstjahres-Behandlungskosten (zurzeit ca. 30% der Gesamtkosten) führen. Die Kosten-Effektivitäts-Analyse erweist sich als Studienform mit der geringsten Anfälligkeit für Bias und Confounder. Trotz einer vergleichsweise hohen externen Validität ist das Studiensetting nicht uneingeschränkt übertragbar auf die Versorgungsrealität des deutschen Gesundheitssystems. Es existiert aktuell keine generelle Empfehlung für den Einsatz der Gendiagnostik zur Steuerung der Arzneimitteltherapie in Psychiatrie. Ebenso hat die integrierte Versorgung bisher keinen umfassenden Einzug in den psychiatrischen Behandlungsalltag gefunden, so dass die beschriebenen Limitationen einen positiven Nutzennachweis erschweren. Dennoch ist das Konzept als praktisch umsetzbar zu bewerten. Schlussfolgerung: Bei dieser Faktenlage ist das Interesse der GKV an der Veranlassung einer gesundheitsökonomischen Evaluation mit dem Ziel einer Erstattungsfähigkeit des a priori durchgeführten pharmakogenetischen Screenings bei Schizophrenie als eher gering einzustufen. Jedoch lassen das Update der S3-Praxisleitlinie mit dem Einbezug der strukturierten u. integrierten Versorgung sowie der Aktionsplan „Individualisierte Medizin“ des Bundesforschungsministeriums auf eine Fokussierung auf diese Fragestellung und veränderte Interessenlage bzgl. der Initiierung der Pilotstudie hoffen. Weitere Forschungstätigkeit sowie die praktische Erprobung neuer gendiagnostischen Verfahren sind, basierend auf versorgungsbezogenen Pilotstudien wie der hier konzeptionierten, fachübergreifend erforderlich, um die Relevanz der Methodik für den psychiatrischen Versorgungsalltag zu belegen. / Purpose: Development of a health-economic investigation method to study whether a cost reduction under concurrent optimisation of the medical use exists by using pharmacogenetic a- priori- screening with first diagnosis of a schizophrenia. Final objective is the reimbursement of pharmacogenetic diagnostics for the indication schizophrenia in the German health statutory insurance (GKV). Methods: A prospective, randomised and controlled, 3-armed, parallel, open, multicentre pilot study with a duration of 3 years was designed based on the actual status of genetic-diagnostic research as well as the evidence-based therapy of schizophrenia. Study population: 300 patients (1:1:1) aged 18 to 65 years with initial F20 diagnosis (ICD-10). Interventions: pharmacogenetic screening and integrated care; integrated care; standard care. For evaluation of the medical benefit the clinical outcome is measured at defined times with regard to the patients' relevant endpoints mortality, morbidity, quality of life and side effects. In perspective relevant costs are determined by "piggy back" procedure. Results: In view of actually existing limitations within the German health system (e.g., insufficient intersectional medication and information management) the integrated care is considered being a suitable setting to demonstrate the advantage of using pharmacogenetic screening. Nevertheless, the integrated care does not show the general standard of the psychiatric patient's care at the moment. From GKV perspective essential cost drivers of schizophrenia therapy are relapses, hospital stays, unemployment and untimely superannuation. Diminishing the rate of these parametres could lead, e.g., to a reduction of the first year medical costs (at the moment approx. 30% of the total expenses). The cost-effectiveness analysis seems to be the study form with the slightest susceptibility to bias and confounding. In spite of a relatively high external validity the study setting is not unconditionally transferable to the German health system. Currently no general recommendation exists for the application of the genetic diagnostics to manage medication therapy in psychiatry. Up to now also the integrated care has not found a comprehensive entry in psychiatric practice, so that the described limitations are complicating a positive use proof. Nevertheless, the investigational concept can be regarded as feasible. Conclusion: Based on the existing situation the GKV's interest in performing a health-economic evaluation, which is focussed on the reimbursement of pharmacogenetic a priori-diagnostics in schizophrenia, is considered to be low. However, the situation may change in view of the expected update of the S3-practise guideline with the focus on structured and integrated care as well as the action plan „individualised medicine“ of the German federal research ministry. Thus, there is hope for changing interests in a pilot study. Based on care-related pilot studies as presented here, further research activities and practical testing of recent gene diagnostic procedures are necessary to demonstrate the relevance of the methodology for psychiatric practice.

Background: Up to 55% of patients administered ketamine, experience an emergence phenomena (EP) that closely mimics schizophrenia and increases their risk of injury. While genetics accounts for about 50% of severe adverse drug reactions, no studies have investigated genetic association of ketamine-induced EP in healthy patients. Ketamine is metabolized by CYP 2B6 enzymes and CYP 2B^8^ allele significantly alter ketamine metabolism. In addition, ketamine exerts most of its effects by inhibiting the N-methyl-D-aspartate receptor (NMADR), and NMDAR genes (GRIN2B) are associated with learning and memory impairment and schizophrenia. Purpose: To investigate the relationship between CYP2B6*6 and GRIN2B single nucleotide polymorphisms (SNPs) and ketamine-induced emergence phenomena (EP). Methods: This cross-sectional pharmacogenetic study recruited 75 patients having minor orthopedic, hand, foot, anorectal surgeries from two outpatient surgical centers. EP was measured with the Clinician Administered Dissociative State Scale (CADSS). DNA was genotyped using standard Taqman assays and protocols. Genetic association of CYP2B6*6 and GRIN2B (rs1019385 & rs1806191) SNPs and ketamine induced EP occurrence and severity were tested using multivariate logistic and linear regression, adjusting for age, ketamine dose, duration of anesthesia, and time since ketamine administration. Results: Forty-seven patients (63%) received ketamine and were genotyped. Nineteen EP cases were identified (CADSS > 4), leaving 28 non-EP controls. For our population, CADSS has an internal consistency reliability Cronbach’s alpha of 0.82, and could reliably distinguish ketamine from non-ketamine cases. Occurrence and severity of EP were not associated with CYP2B6*6 or GRIN2B (p > 0.1). Models removing genotype and containing age, ketamine dose, duration of v anesthesia, and time since ketamine administration significantly predicted EP occurrence (p = 0.001) and severity (p = 0.007). Presence and severity of EP did not affect patient satisfaction with care. Discussion: Younger age, higher dose and longer duration of anesthesia significantly predicted EP occurrence and severity among our sample. This study provides effect size estimates useful for the design of adequately powered future genetic association studies. The feasibility of recruitment from patients undergoing elective, outpatient surgeries and ease of post-operative EP assessment with CADSS supports our approach. However, the small sample size may have limited about ability to determine significant differences. Conclusion: Fully powered studies are needed to investigate this important phenomena. Determining factors for anesthesia-related EP symptoms may reduce risks and costs associated with this adverse medication effect.

Introdução: A grande variabilidade individual em resposta a fármacos antitabagismo sugere que tratamentos específicos podem ser mais efetivos em determinados subgrupos de fumantes. No contexto de medicina personalizada, o principal objetivo do presente estudo foi avaliar se polimorfismos nos genes CHRNA4, CHRNB2, CYP2B6 e ANKK1 estão associados com a resposta às terapias de cessação tabágica em pacientes provenientes de um programa de assistência ao fumante. Métodos: Estudo de coorte com 483 pacientes fumantes que receberam tratamento farmacológico (vareniclina, vareniclina e bupropiona, bupropiona em monoterapia ou coadministrada com terapia de reposição nicotínica). O sucesso na cessação tabágica foi considerado para os pacientes que completaram 6 meses de abstinência contínua. O teste de Fagerström para a dependência à nicotina (FTND) e o escore de consumo situacional Issa foram utilizados para avaliar a dependência à nicotina. Os polimorfismos CHRNA4 (rs1044396 e rs2236196), CHRNB2 (rs2072660 e rs2072661) e ANKK1 (rs1800497) foram genotipados pela análise da curva de melting e os polimorfismos CYP2B6 *9 (rs3745274), *4 (rs2279343), *5 (rs3211371) foram genotipados por restrição enzimática. Resultados: Os pacientes com o genótipo CC para o polimorfismo CHRNA4 (rs10443196) obtiveram menor taxa de sucesso no tratamento com vareniclina (29,5%) em comparação com os portadores dos genótipos CT ou TT (50,9%) (P=0,007; n=167). Os genótipos CT ou TT foram associados com maior odds ratio para o sucesso (OR=1,67; IC 95%=1,10-2,53; P=0,02), em um modelo multivariado. Os pacientes com o genótipo AA para o polimorfismo CYP2B6 (rs2279343) obtiveram maior taxa de sucesso no tratamento com bupropiona (48,0%) em comparação com portadores dos genótipos AG ou GG (35,5%) (P=0,05; n=237). O genótipo AA foi associado com maior odds ratio para o sucesso no tratamento (OR=1,92; IC 95%=1,08-3,42; P=0,03), em um modelo multivariado. Não foram observadas diferenças significativas nos escores FTND e Issa com relação aos polimorfismos estudados. Conclusão: Os polimorfismos CHRNA4 (rs1044396) e CYP2B6 (rs2279343) estão associados com a cessação tabágica em indivíduos tratados com vareniclina e bupropiona, respectivamente. Sugere-se que estes polimorfismos influenciam a resposta farmacológica e podem ser importantes para o desenho de uma farmacoterapia individualizada / Background: The large individual variability in response to drugs for smoking cessation suggests that specific treatments can be more effective in particular subgroups of smokers. In the context of personalized medicine, the main aim of the present study was to evaluate whether the CHRNA4, CHRNB2, CYP2B6 and ANKK1 polymorphisms are associated with response to smoking cessation therapies in patients from a smoker assistance program. Methods: This cohort study enrolled 483 smoking patients patients who received pharmacological treatment (varenicline, varenicline plus bupropion, bupropion in monoterapy or plus nicotine replacement therapy). Smoking cessation success was considered for patients who completed 6 months of continuous abstinence. Fagerström test for nicotine dependence (FTND) and Issa situational smoking scores were analyzed for nicotine dependence. The CHRNA4 (rs1044396 and rs2236196), CHRNB2 (rs2072660 and rs2072661) and ANKK1 rs1800497 polymorphisms were genotyped by high resolution melting analysis and the CYP2B6 *9 (rs3745274), *4 (rs2279343) and *5 (rs3211371) were genotyped by restriction fragment lenght polymorphisms. Results: Patients with CHRNA4 rs1044396 CC genotype had lower success rate in treatment with varenicline (29.5%) compared with carriers of CT or TT genotypes (50.9%) (P=0.007, n=167). The CT or TT genotypes were associated with higher odds ratio for success (OR=1.67, 95%CI=1.10-2.53, P=0.02), in a multivariate model. Patients with CYP2B6 rs2279343 AA genotype had higher success rate in treatment with bupropion (48.0%) compared with carriers of AG or GG genotypes (35.5%) (P=0.05, n=237). The AA genotype was associated with higher odds ratio for success (OR=1.92, 95%CI=1.08-3.42, P=0.03), in a multivariate model. We did not observe significant differences in the FTND and Issa scores according to the studied polymorphisms. Conclusion: The CHRNA4 rs1044396 and CYP2B6 rs2279343 are associated with smoking cessation in individuals on varenicline and bupropion terapies, respectively. We suggest that these polymorphisms influence the pharmacological response of these drugs and it might be important in the design of individualized pharmacotherapy

O anticoagulante oral cumarínico varfarina é vastamente utilizado para o tratamento e prevenção de eventos tromboembólicos, que configuram uma das principais causas de mortalidade mundial. Contudo, de acordo com fatores genéticos e ambientais, os cumarínicos apresentam grande variação em sua farmacocinética e farmacodinâmica, implicando em respostas variáveis entre os indivíduos. Para auxílio na tomada de decisão pelo corpo clínico na terapia com a varfarina, algoritmos farmacogenéticos estimadores de dose têm sido extensivamente estudados e desenvolvidos, com o intuito de estabelecer terapias personalizadas. Neste sentido, o presente estudo teve como objetivos investigar a associação de polimorfismos nos genes ABCB1 e CYP4F2 com a variabilidade do requerimento de dose de varfarina, e, primariamente, avaliar o impacto da inclusão desses polimorfismos como covariáveis do algoritmo farmacogenético estimador de dosagem de varfarina previamente desenvolvido para a população brasileira por Santos et al. (2015). Neste estudo retrospectivo, foram utilizadas amostras de 965 pacientes registrados no Instituto do Coração (InCor) do Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo (HC/FMUSP). As genotipagens dos polimorfismos ABCB1 c.3435C>T e CYP4F2 c.1297G>A foram realizadas por meio da amplificação do DNA genômico através da reação em cadeia da polimerase seguida por análise de curva de dissociação (PCR-HRM) ou ensaio TaqMan®, respectivamente para cada variante. Para as análises estatísticas, utilizamos a abordagem de regressão linear múltipla, considerando a dose estável de varfarina como variável resposta e como covariáveis os polimorfismos de interesse nos genes ABCB1 e CYP4F2, bem como outros fatores genéticos, clínicos e demográficos. Nossos resultados sugerem que carreadores da variante ABCB1 c.3435C>T requerem doses médias de manutenção de varfarina inferiores quando comparados aos indivíduos com genótipo selvagem (redução de 2,5 e 4,3 mg/semana, respectivamente para carreadores dos genótipos CT e TT). Ainda, observamos uma grande variabilidade de dose de varfarina no subgrupo de pacientes autodeclarados não-brancos, de acordo com os genótipos ABCB1 (redução de 5,5 e 10,2 mg/semana, respectivamente para carreadores dos genótipos CT e TT). Além disso, verificamos que ambos os polimorfismos ABCB1 c.3435C>T e CYP4F2 c.1297G>A contribuíram para a predição de dose de varfarina, quando associados a outros fatores genotípicos, demográficos e clínicos relevantes, sendo estatisticamente significativos, aumentando o coeficiente de determinação do algoritmo em 2,6% e explicando um adicional de 3,6% da variabilidade interindividual de dosagem. Em conclusão, demonstramos que as genotipagens das variantes ABCB1 c.3435C>T e CYP4F2 c.1297G>A podem ser relevantes para acurar a terapêutica com varfarina na população brasileira / The coumarin oral anticoagulant warfarin has been widely used for treating and preventing thromboembolic events, which are one of the main causes of mortality worldwide. However, according to genetic and environmental factors, coumarins show high variance in pharmacokinetics and pharmacodynamics, resulting in variable interindividual responses. For supporting warfarin clinical decisions, genetic-guided algorithms have been extensively studied and developed, in order to set personalized therapeutics. In this context, the aims of this master\'s research project were to investigate the association of ABCB1 and CYP4F2 polymorphisms with individual\'s warfarin dose requirements and to assess the impact of the inclusion of these polymorphisms as covariates in the genetic-guided dosing algorithm developed by Santos PC et al. (2015) for the Brazilian population. For this retrospective study, 965 patients enrolled in the Heart Institute (InCor), University of São Paulo Medical School (FMUSP) were involved. Genotyping of ABCB1 c.3435C>T and CYP4F2 c.1297G>A were performed by genomic DNA amplification by polymerase chain reaction (PCR), followed by melting curve analysis (HRM-PCR) and TaqMan® assay, respectively. For statistical analysis, we utilized multiple linear regression approach considering warfarin stable dose as the dependent variable and the ABCB1 and CYP4F2 variants, as well as other genetic, clinical and demographic factors as covariates. Our data suggests that carriers of ABCB1 c.3435C>T genotypes require lower mean warfarin maintenance doses when compared to wild-type individuals (reduction of 2.5 and 4.3 mg/week, respectively for CT and TT genotype carriers). Furthermore, we observed large warfarin dose variability for the subgroup of patients who self-declared themselves as non-white according to ABCB1 genotypes (lowering of 5.5 and 10.2 mg/week, respectively for CT and TT genotype carriers). Finally, we verified that both ABCB1 c.3435C>T and CYP4F2 c.1297G>A polymorphisms were able to contribute to warfarin dose prediction, when associated to other relevant genetic, clinical and demographic data, being statistically significant, improving the algorithm\'s coefficient of determination by 2.6% and explaining an additional of 3.6% of the interindividual warfarin dosage variability. In conclusion, in this study we have demonstrated that the genotyping of ABCB1 c.3435C>T and CYP4F2 c.1297G>A may be relevant for improving the management of warfarin therapeutics in Brazilian patients

O receptor scavenger classe B tipo I (SR-BI) media a captação seletiva do colesterol da lipoproteina de alta densidade (HDL) e participa no effluxo do colesterol livre para aceptores lipoprotéicos. A HDL tem um importante rol aterogênico associado com sua participação no transporte reverso do colesterol. Polimorfismos no gene que codifica para o SR-BI (SCARB1) foram relacionados com alterações do perfil lipídico sérico e outros fatores de risco associados com doença cardiovascular. As estatinas são inibidores da síntese do colesterol utilizados no tratamento da dislipidemia. Vários polimorfismos em genes envolvidos no metabolismo intermediario de lipideos foram relacionados com diferenças na resposta a hipolipemiantes. Com a finalidade de avaliar o efeito de polimorfismos do SCARB1 sobre o perfil lipídico sérico, expressão gênica e a resposta a estatinas, foram selecionados 185 indivíduos normolipidêmicos (NL) e 147 pacientes hipercolesterolêmicos (HC). Os pacientes HC foram tratados com atorvastatina (10 mg/dia/4 semanas). DNA e RNA foram extraídos de amostras de sangue periférico. Os polimorfismos de nucleotídeo único (SNP) G4A, In5C>T e Ex8C>T foram detectados por PCR-RFLP. A expressão de RNAm do SCARB1 em células mononucleares de sangue periférico (CMSP) foi analisada por PCR em tempo real usando o gene da Ubiquitina c (UBC) como referência endógena. Nos indivíduos HC, as freqüências dos alelos raros G4A (12%), In5C>T (7%) e Ex8C>T (40%), no grupo HC, foram similares às encontradas no grupo NL (4A: 15%, In5T: 7%, e Ex8T: 35%, p>0,05). O alelo SCARB1 4A (genótipos GA + AA) foi associado com valores diminuídos de apoAI no grupo NL. O alelo In5T foi associado com maior concentração LDL-C sérico (p=0,029), em NL, e com apoB e razão apoB/apoAI elevadas (p>0,05) no grupo HC. O SNP SCARB1 Ex8C>T não foi relacionado com o perfil lipídico sérico basal, embora os portadores do genótipo Ex8CC foram associados com resposta reduzida ao tratamento com atorvastatina mostrando menor variação de colesterol total, LDL-C, apoB e razão apoB/apoAI. O SNP Ex8C>T foi associado com maior probabilidade (OR=3,1; 95% IC: 1,00-9,5; p=0,044) de ter uma resposta à atorvastatina diminuída. Os SNPs SCARB1 In5C>T e Ex8C>T estão em desequilíbrio de ligação. O haplótipo G1C5C8/G1T5C8 foi associado com concentrações basais elevadas de triglicérides e VLDL-C em NL e diminuídas de HDL-C e apoAI em HC. Os haplótipos G1C5C8/A1C5C8 e C5C8/C5C8 tiveram variação diminuída da apoB quando comparados com os outros haplótipos, G1C5C8/A1C5C8 e o diplótipo C5C8/C5C8 também apresentou uma variação reduzida da razão apoB/apoAI. Os SNPs G4A e In5C>T estão associados com diminuição da expressão gênica do SCARB1 em NL. O tratamento com atorvastatina não modifica a expressão de RNAm do SCARB1 em CMSP nos HC. Esses resultados são sugestivos de que os polimorfismos no SCARB1 estão associados com valores basais do perfil lipídico sérico e de expressão de RNAm do SCARB1, assim como de resposta à atorvastatina. / The scavenger receptor class B type I (SR-BI) mediates the selective uptake of the high density lipoprotein (HDL) cholesterol and it participates in the free cholesterol efflux to lipoprotein acceptors. HDL has an important antiatherogenic role associated with important activity in the cholesterol reverse transport. Polymorphisms in the SR-BI gene (SCARB1) have been related to variations on plasma lipoprotein profile and other risk factors for cardiovascular disease. Statins are potent inhibitors of cholesterol synthesis prescribed for treatment of the dislipidemia. Several polymorphisms in genes involved in intermediary metabolism of lipids have been related to differences in response to lowering-cholesterol drugs. In order to evaluate the effect of SCARB1 polymorphisms on serum lipids, gene expression and lipid-lowering response to atorvastatin, 185 normolipidemic (NL) and 147 hypercholesterolemic (HC) individuals were selected. HC individuals were treated with atorvastatin (10 mg/day/4 weeks). DNA and RNA were extracted from peripheric blood mononuclear cells (PBMC). SCARB1 mRNA expression was analyzed by real time PCR using ubiquitin c gene (UBC) as endogenous reference. The frequencies of the rare alleles in HC group (G4A: 12%; In5C>T: 7%, and ExC>T: 39%) were similar to those found in NL individuals (4A: 15%, In5T: 7%, and Ex8T: 35%, p>0.05). The SCARB1 4A allele (GA+AA genotypes) was associated with lower apoAI concentration in NL. The In5T allele was associated with higher serum LDL-C (p=0,029) in NL individuals, and with higher apoB and apoB/apoAI ratio (p>0,05) in HC group. SCARB1 Ex8C>T SNP was not related to serum lipids profile, however Ex8CC genotype carriers had lower variation of total cholesterol, LDL-C, apoB and apoB/apoAI ratio in response to atorvastatin. SCARB1 Ex8C>T was associated with higher chance to have a lower atorvastatin response (OR=3.1, 95% CI: 1.00-9.5; p=0.044). SCARB1 In5C>T and ExC>T were in linkage disequilibrium. G1C5C8/G1T5C8 SCARB1 haplotype was associated with higher level of triglycerides and VLDL-C in NL and lower HDL-C and apoAI levels in HC individuals. G1C5C8/A1C5C8 haplotype and C5C8/C5C8 diplotype had lower variations on apoB than the other haplotypes, and G1C5C8/A1C5C8 had also lower variation on apoB/apoAI ratio. G4A and In5C>T SNPs are associated with lower SCARB1 mRNA expression in PBMC of NL individuals. Atorvastatin therapy did not modify the expression level of the SCARB1 transcript in HC. Our results suggest that SCARB1 polymorphisms are associated with basal serum lipids profile, mRNA SCARB1 expression and atorvastatin response.

Tous les individus ne répondent pas de la même façon à un même traitement médicamenteux, tant sur le plan pharmacologique (efficacité) que sur le plan toxicologique (effets indésirables). Des facteurs génétiques affectant la pharmacocinétique et la pharmacodynamie des médicaments jouent un rôle déterminant dans cette variabilité interindividuelle de réponse. Certains de ces facteurs sont distribués de manière hétérogène entre les populations humaines. Ces différences s’expliquent en partie par des phénomènes d’adaptation locale des populations à leur environnement. Au cours de son histoire, l’homme a dû en effet faire face à des changements de son environnement chimique, qui ont entraîné des pressions de sélection naturelle sur les gènes intervenant dans la réponse de l’organisme aux xénobiotiques. Ce sont ces mêmes gènes qui, aujourd’hui, influencent la réponse aux médicaments.La formidable accélération des progrès de la génétique donne accès aujourd’hui à la variabilité génétique des populations humaines sur l’ensemble du génome, facilitant la découverte et la compréhension des mécanismes génétiques à l’origine des traits complexes comme la réponse aux médicaments. Les outils de la génétique des populations permettent notamment d’identifier des variants affichant un niveau de différenciation génétique inhabituel entre les populations humaines et de déterminer dans quelle mesure la sélection naturelle a joué un rôle dans les profils atypiques observés.Dans cette thèse, nous avons appliqué ces outils à des données de génotypage et de séquençage pour analyser les profils de différenciation génétique des populations humaines pour les gènes de la réponse aux médicaments. Nous avons ainsi démontré qu’une sélection positive récente en Asie de l’Est dans la région génomique du gène VKORC1 était responsable d’une hétérogénéité de distribution du variant fonctionnel de VKORC1, à l’origine des différences de sensibilité génétique aux anticoagulant oraux de type antivitamine K entre les populations humaines. Puis, en étendant notre analyse à l’ensemble des pharmacogènes majeurs, nous avons identifié de nouveaux variants potentiellement intéressants en pharmacogénétique pour expliquer les différences de réponse aux médicaments entre les populations humaines et les individus. Enfin, l’étude approfondie du gène NAT2 nous a permis de révéler un processus de sélection homogénéisante ciblant un variant fonctionnel associé à un phénotype d’acétylation très lent. Ces résultats soulignent l’influence déterminante de la sélection naturelle dans la variabilité de réponse aux médicaments entre les populations et les individus. Ils montrent l’apport de la génétique des populations pour une meilleure compréhension de la composante génétique de la réponse aux médicaments et des traits complexes. / Response to drug treatment can be highly variable between individuals, both in terms of therapeutic effect (efficacy) and of adverse reactions (toxicity).Genetic factors affecting drug pharmacodynamics and pharmacokinetics play a major role in this inter-individual variability. Some of these factors are heterogeneously distributed among human populations. Local adaptation of populations to their environment partly explained those differences. Indeed,during human evolution, populations had to cope with changes in their chemical environment that triggered selective pressures on genes involved in xenobiotic response. Those genes are the same ones that influence drug response today.The tremendous recent advances in genotyping and sequencing technologies now provide access to the genome-wide patterns of genetic variation in a growing number of human populations, facilitating our understanding of the genetic mechanisms underlying complex traits such as drug response. Population genetic tools allow the identification of variants showing an unusual pattern of genetic differentiation among human populations and the determination of the role played by natural selection in shaping the atypical patterns observed.In this thesis, we have applied these tools on both SNP-chip genotyping data and Next Generation Sequencing data to analyze the genetic differentiation patterns of human populations for genes involved in drug response. We show that a nearly complete selective sweep in East Asia in the genomic region of the VKORC1 gene is responsible for an heterogeneous distribution of theVKORC1 functional variant and can explain the inter-population genetic differences in response to oral anti-vitamin K anticoagulants. Extending the analysis to all major pharmacogenes, we have identified new variants of potential relevance to pharmacogenetics which could explain inter-population and inter-individual differences in drug response. Finally, by a comprehensive analysis of the NAT2 gene, we evidence a homogenizing selection process targeting a functional variant associated with a very slow acetylation phenotype. These results emphasize the crucial role of natural selection in the inter-population and inter-individual drug response variability.They also illustrate the relevance of population genetics studies for a better understanding of the genetic component underlying drug response and complex traits.

A resposta individual ao tratamento com hormônio de crescimento recombinante humano (rhGH) na síndrome de Turner (ST) é muito variável. A falta de individualização da dose pode justificar a variabilidade de respostas e os resultados insatisfatórios de algumas pacientes mesmo quando diagnosticadas e tratadas em condições ideais. Como a resposta ao tratamento com rhGH reflete fatores genéticos e não genéticos, o objetivo do presente estudo é avaliar a influência de fatores genéticos no tratamento com rhGH das portadoras de ST. Foram estudadas 112 pacientes com ST, em tratamento ou que interromperam a terapia, após atingir a altura final. O DNA genômico de todas as pacientes foi obtido para estudo de três polimorfismos em genes envolvidos na ação do GH: a presença ou ausência do éxon 3 do receptor do GH (GHR), VNTR presente na região promotora do gene do fator de crescimento insulina-símile-1(IGF1) e polimorfismo de único nucleotídeo (SNP) presente na região promotora do gene da Proteína 3 de Ligação a Fator de Crescimento Insulina-símile (IGFBP3). Os achados moleculares foram correlacionados com a velocidade de crescimento no primeiro ano de tratamento (n=112) e com altura adulta (n=65)) após uso de rhGH por meio de análises de regressão linear simples e múltipla, ajustadas para as demais variáveis clínicas relacionadas à resposta ao tratamento com rhGH em ST. Dois desses polimorfismos - a presença (GHR-fl) ou ausência (GHR-d3) do éxon 3 do GHR e o polimorfismo - 202 A/C IGFBP-3- influenciaram de forma independente e interativa a capacidade de resposta ao tratamento com rhGH em pacientes com ST; e o VNTR de repetições (CA)n da região promotora do IGF1 não demonstrou influência sobre nenhum dos parâmetros analisados. Pacientes carreadoras de, pelo menos, um alelo GHR-d3 apresentaram melhor velocidade de crescimento e maior altura final após tratamento com rhGH do que as homozigotas para o alelo GHR-fl. Similarmente, as carreadoras de, pelo menos, um alelo -202 A-IGFBP3 apresentaram melhor velocidade de crescimento e maior altura final após tratamento com rhGH, além de maiores concentrações séricas de IGFBP-3, do que as homozigotas para o alelo -202 CIGFBP3. Finalmente, a análise conjunta dos genótipos GHR-éxon 3 e -202 A/C IGFBP3 mostrou uma clara influência epistática, parcialmente aditiva, desses dois polimorfismos comuns na altura adulta de pacientes com ST tratadas com rhGH (efeito isolado do GHR-éxon 3, R2 = 0,27; efeito isolado do -202 A/C IGFBP3, R2 = 0,24; influência combinada desses polimorfismos, R2 = 0,37). Em conjunto com as variáveis clinicas, altura ao início do tratamento (p<0,001) e idade cronológica ao início da puberdade (p<0,001), estes dois polimorfismos são capazes de predizer 61% da variabilidade da altura adulta, após uso de rhGH. Embora estudos de validação sejam ainda necessários, acredita-se que as informações geradas por este e outros estudos - direcionados a um melhor entendimento das bases moleculares envolvidas na capacidade de resposta ao tratamento com rhGH - possam servir no futuro como importante ferramenta de individualização do tratamento com rhGH / Individual response to treatment with recombinant human growth hormone (rhGH) in Turner syndrome (TS) is very variable. The lack of individualization of rhGH dosing may explain the variability of response and the unsatisfactory results for some patients even when diagnosed and treated in ideal conditions. As the response to treatment with rhGH reflects genetic and nongenetic factors, the objective of this study is to evaluate the influence of genetic factors on rhGH treatment of patients with TS. We studied 112 patients with TS in rhGH therapy or who have discontinued therapy after adult height. Genomic DNA from all patients was obtained for the study of three polymorphisms in genes involved in GH action: the presence or absence of éxon 3 of the GH receptor (GHR), VNTR in the promoter region of the gene for insulin-like growth factor- 1 (IGF1) and a single nucleotide polymorphism (SNP) in the promoter region of the gene insulin-like growth factor-binding protein 3 (IGFBP3). Molecular findings were correlated with the first-year growth velocity (n = 112) and adult height (n = 65)) after rhGH therapy using simple and multiple linear regressions analysis adjusting for other clinical variables related to the response to rhGH treatment on TS. Two of these polymorphisms - the presence (GHR-fl) or absence (GHR-d3) of the GHR éxon 3 polymorphism and -202 A / C IGFBP-3 independently and interactively influenced the response to rhGH treatment in patients with TS, whereas the VNTR in the promoter region of the gene for IGF1 showed no influence on any of the parameters analyzed. Patients carrying at least one d3-GHR allele have better first-year growth velocity and greater adult height after rhGH treatment than those homozygous for GHR-fl allele. Similarly, the carriers of at least one -202 A-IGFBP3 allele showed better first-year growth velocity and greater adult height after rhGH treatment, besides higher serum IGFBP-3 levels, than those homozygous for -202 C-IGFBP3 allele. Finally, the combined analysis of GHR-éxon 3 and -202 A / C IGFBP3 genotypes have demonstrated a clear epistatic influence, partially additive, of these two common polymorphisms on adult height of patients with TS treated with rhGH (isolated effect of GHR-éxon 3, R2 = 0.27; isolated effect of the -202 A / C IGFBP3, R2 = 0.24; combined influence of these polymorphisms, R2 = 0.37). In conjunction with the clinical variables, baseline height (SDS) (p <0.001) and chronological age at onset of puberty (p <0.001), these two polymorphisms are able to predict 61% of the variability in adult height after rhGH therapy. Although validation studies are still needed, we believe that the information brought by this and other studies whose efforts are to understand the molecular basis involved in responsiveness to rhGH treatment can serve as an important tool in the future individualization of treatment with rhGH

Intrdodução: As terapias com anticonvulsivantes de anel aromático (ACA) são freqüentemente associadas a reações adversas. No entanto, reações de hipersensibilidade (RH) não-imediatas (tardias) a estes fármacos são raras, imprevisíveis e geralmente relacionadas à alta morbidade e mortalidade. Foi demonstrado que estas RH aos ACA estão fortemente associadas ao Antígenio de Leucócitos Humanos (HLA)-B*1502 em pacientes chineses e ao HLA-A*3101 em caucasianos. Polimorfismos de genes do metabolismo do Citocromo P450 (CYP)2C9 foram mais associados a estas reações em pacientes orientais. Objetivo: Nosso objetivo é analisar a associação das reações de hipersensibilidade a anticonvulsivantes de anel aromático com os polimorfismos descritos e de interesse, bem como realizar a tipificação de HLA em uma população de São Paulo, Brasil. Métodos: Estudo tipo caso-controle com genotipagem dos polimorfismos de interesse por reação em cadeia da polimerase (PCR) em tempo real e tificação de HLA A, B, C, DRB, DQA, DQB por PCR seguido de deteção utilizando método LuminexR. A avaliação fenotípica se baseou em sistemas de escores padronizados, utilizando um questionário adaptado da ENDA (Rede Européia de Alergia a Medicamentos), em registros médicos e no acompanhamento clínico. O teste de contato com o medicamento suspeito foi realizado de acordo com as recomendações da ENDA, nos pacientes que apresentaram reação. Resultados: Foram estudados 506 pacientes, 65% do gênero feminino e a idade média foi de 43,6 anos. Oitenta por cento era de etnia mista. Polimorfismos de HLA-A*3101, HLA-B*1502, CYP2C9, CYP2C19 e CYP3A5 foram analisados de 55 indivíduos com reações de hipersensibilidade (RH) a antiepilépticos, de 85 tolerantes e de 366 controles sadios. Dos 55 casos foram validados como RH, 32 apresentaram Reação a Drogas com eosinofilia e sintomas sistêmicos (DRESS), 12 Síndrome de Stevens-Johnson (SSJ) e 11 exantema maculo-papular. De todos os 46 testes de contato com medicamento, 29 (63%) foram positivos, tanto em SSJ como em DRESS. Houve associação significativa entre polimorfismo de HLA-A*1502 e casos. Nenhum de nossos grupos de estudo apresentou associação positiva com polimorfismos de HLAA* 3101. Verificamos uma forte associação entre a atividade normal do CYP3A5 e indivíduos tolerantes quando comparado com casos (p = 0,0002, OR = 4,8). A tipificação de HLA demonstrou associação significante de HLA-A*31, HLA-A*74, HLA-B*35 e HLA-B*53 com reações graves aos ACA e de HLA-B*44 e HLA-C*03 com indivíduos tolerantes. Conclusão: Estes resultados sugere fortemente a existência de fatores genéticos de risco e/ou de proteção a RH a ACA em indivíduos brasileiros, mas não devem ser considerados de forma isolada. Assim, a relevância deste estudo extrapola o objetivo de estudo caso-controle e sugere um modelo como forma de prevenção primária às RH aos ACA. / Background: Antiepileptics with aromatic ring (AAR) therapies are frequently associated with adverse reactions. Nevertheless non-immediate (late) hypersensitivity reactions (HR) to these drugs are rare, unpredictable and usually related with high morbidity and mortality. A strong pharmacogenetic association has been reported in Chinese patients with these HR and Human Leukocyte Antigen (HLA)-B*1502 and with HLA- A*3101 in caucasians. Polymorphism of genes of P450 Cytocrome (CYP)2C9 has been related to these reactions in patients of oriental origin. Objective: Our aim is to analyze the association between hypersensitivity reactions due to AAR and the described polymorphisms, as well as perform the typification of HLA in a population of São Paulo, Brazil. Methods: Case-control study genotyping the polymorphisms of interest by polymerase chain reaction (PCR) real time and typifying HLA A, B, C, DRB, DQA, DQB by PCR followed by LuminexR .The phenotype evaluation was based on standardized scoring systems using an adapted ENDA (European Network of Drug Allergy) questionnaire, medical records and on the clinical follow-up in our Allergy Clinic. The patch test with the culprit drug was performed in patients who experienced HR according to the ENDA recommendations. Results: We studied 506 subjects, 65% female and mean age was 43,6 years. Eighty percent had mixed ethnicity. Polymorphisms of HLA-B*1502, HLA- A*3101, CYP2C9, CYP2C19 e CYP3A5 were studied in 55 subjects with antiepileptics HR, 85 tolerants, and 366 control subjects. Of 55 cases were validated as AHR, 32 presented Drug Reaction with Eosinophilia and Systemic Symptoms (DRESS), 12 Stevens-Johnson Syndrome (SJS) and 11 maculopapular exanthema. Of all 46 drug patch tests, 29 (63%) were positive, in both SJS and DRESS. A significant association between polymorphism of HLA-A*1502 and cases was found. None of our study groups presented positive association with HLA-A*3101 polymorphisms. We found a strong association between the normal activity of CYP3A5 and tolerants subjects when compared to HR (p=0.0002, OR=4.8). The HLA typification showed a significant association between HLA-A*31, HLA-A*74, HLAB* 35 e HLA-B*53 and severe AAR reactions and HLA-B*44 and HLA-C*03 in tolerants subjects. Conclusion: These results strongly suggests the existence of genetic risk and/or protective factors to the development of HR to AAR AAR in Brazilian subjects, but it should not be considered in a isolated manner. So, the relevance of this study extrapolates the aim of a case-control study and suggests a system of primary prevention to HR due to AAR

Introdução: A grande variabilidade individual em resposta a fármacos antitabagismo sugere que tratamentos específicos podem ser mais efetivos em determinados subgrupos de fumantes. No contexto de medicina personalizada, o principal objetivo do presente estudo foi avaliar se polimorfismos nos genes CHRNA4, CHRNB2, CYP2B6 e ANKK1 estão associados com a resposta às terapias de cessação tabágica em pacientes provenientes de um programa de assistência ao fumante. Métodos: Estudo de coorte com 483 pacientes fumantes que receberam tratamento farmacológico (vareniclina, vareniclina e bupropiona, bupropiona em monoterapia ou coadministrada com terapia de reposição nicotínica). O sucesso na cessação tabágica foi considerado para os pacientes que completaram 6 meses de abstinência contínua. O teste de Fagerström para a dependência à nicotina (FTND) e o escore de consumo situacional Issa foram utilizados para avaliar a dependência à nicotina. Os polimorfismos CHRNA4 (rs1044396 e rs2236196), CHRNB2 (rs2072660 e rs2072661) e ANKK1 (rs1800497) foram genotipados pela análise da curva de melting e os polimorfismos CYP2B6 *9 (rs3745274), *4 (rs2279343), *5 (rs3211371) foram genotipados por restrição enzimática. Resultados: Os pacientes com o genótipo CC para o polimorfismo CHRNA4 (rs10443196) obtiveram menor taxa de sucesso no tratamento com vareniclina (29,5%) em comparação com os portadores dos genótipos CT ou TT (50,9%) (P=0,007; n=167). Os genótipos CT ou TT foram associados com maior odds ratio para o sucesso (OR=1,67; IC 95%=1,10-2,53; P=0,02), em um modelo multivariado. Os pacientes com o genótipo AA para o polimorfismo CYP2B6 (rs2279343) obtiveram maior taxa de sucesso no tratamento com bupropiona (48,0%) em comparação com portadores dos genótipos AG ou GG (35,5%) (P=0,05; n=237). O genótipo AA foi associado com maior odds ratio para o sucesso no tratamento (OR=1,92; IC 95%=1,08-3,42; P=0,03), em um modelo multivariado. Não foram observadas diferenças significativas nos escores FTND e Issa com relação aos polimorfismos estudados. Conclusão: Os polimorfismos CHRNA4 (rs1044396) e CYP2B6 (rs2279343) estão associados com a cessação tabágica em indivíduos tratados com vareniclina e bupropiona, respectivamente. Sugere-se que estes polimorfismos influenciam a resposta farmacológica e podem ser importantes para o desenho de uma farmacoterapia individualizada / Background: The large individual variability in response to drugs for smoking cessation suggests that specific treatments can be more effective in particular subgroups of smokers. In the context of personalized medicine, the main aim of the present study was to evaluate whether the CHRNA4, CHRNB2, CYP2B6 and ANKK1 polymorphisms are associated with response to smoking cessation therapies in patients from a smoker assistance program. Methods: This cohort study enrolled 483 smoking patients patients who received pharmacological treatment (varenicline, varenicline plus bupropion, bupropion in monoterapy or plus nicotine replacement therapy). Smoking cessation success was considered for patients who completed 6 months of continuous abstinence. Fagerström test for nicotine dependence (FTND) and Issa situational smoking scores were analyzed for nicotine dependence. The CHRNA4 (rs1044396 and rs2236196), CHRNB2 (rs2072660 and rs2072661) and ANKK1 rs1800497 polymorphisms were genotyped by high resolution melting analysis and the CYP2B6 *9 (rs3745274), *4 (rs2279343) and *5 (rs3211371) were genotyped by restriction fragment lenght polymorphisms. Results: Patients with CHRNA4 rs1044396 CC genotype had lower success rate in treatment with varenicline (29.5%) compared with carriers of CT or TT genotypes (50.9%) (P=0.007, n=167). The CT or TT genotypes were associated with higher odds ratio for success (OR=1.67, 95%CI=1.10-2.53, P=0.02), in a multivariate model. Patients with CYP2B6 rs2279343 AA genotype had higher success rate in treatment with bupropion (48.0%) compared with carriers of AG or GG genotypes (35.5%) (P=0.05, n=237). The AA genotype was associated with higher odds ratio for success (OR=1.92, 95%CI=1.08-3.42, P=0.03), in a multivariate model. We did not observe significant differences in the FTND and Issa scores according to the studied polymorphisms. Conclusion: The CHRNA4 rs1044396 and CYP2B6 rs2279343 are associated with smoking cessation in individuals on varenicline and bupropion terapies, respectively. We suggest that these polymorphisms influence the pharmacological response of these drugs and it might be important in the design of individualized pharmacotherapy