A soja é a cultura agrícola com maior extensão de área plantada no Brasil, país que se destaca no cenário mundial como o segundo maior produtor e exportador desta oleaginosa. A ferrugem asiática (FA), causada pelo fungo Phakopsora pachyrhizi, apresenta-se como um dos mais graves problemas fitossanitários da cultura da soja no Brasil, principalmente por não existirem, até o presente momento, cultivares com níveis de resistência satisfatórios. Com o objetivo de melhor se conhecer a biologia de Phakopsora pachyrhizi e alguns fatores relacionados ao processo infeccioso em soja, no presente trabalho foram avaliados: (1) Métodos de preservação de urediniósporos; (2) Influência da descontinuidade do molhamento foliar no processo infeccioso dos urediniósporos; (3) Influência da luminosidade e da superfície foliar no processo infeccioso de urediniósporos de P. pachyrhizi; (4) Influência do estádio fenológico da soja na infecção de P. pachyrhizi. Os resultados obtidos mostraram que a desidratação dos esporos proporcionou maior viabilidade destes ao longo do tempo, para todas as condições de armazenamento testadas. No deep freezer foi possível preservar os esporos por até 231 dias, independente da sua condição de hidratação. No ambiente, os esporos não desidratados e desidratados permaneceram viáveis por 16 e 22 dias, respectivamente. A reversão de dormência dos esporos foi efetiva ao empregar hidratação (24h de câmara úmida) seguida ou não por choque térmico (40°C/5 minutos). Em todos os tratamentos onde se aplicou molhamento foliar descontínuo, a severidade de FA foi sempre inferior quando comparada ao molhamento contínuo, principalmente quando a interrupção do molhamento se deu após 4 horas de câmara úmida inicial. A interrupção temporária do molhamento afetou os esporos que haviam germinado, pois os mesmo não foram aptos a infectar após novo período de molhamento. Com relação à luminosidade, os urediniósporos foram aptos a infectar plantas de soja tanto na luz quanto no escuro. Porém, severidade maior foi observada quando se inoculou a superfície adaxial, com posterior incubação das plantas no escuro. Os experimentos in vitro mostraram que, na ausência de luz, houve maior germinação e maior formação de apressórios. O teor de cera epicuticular e o seu aspecto ultra-estrutural não apresentaram diferenças entre as superfícies adaxial e abaxial no cultivar BRS 154. Os cultivares BRS 154 e BRS 258, no estádio fenológico reprodutivo, R5, apresentaram menor severidade em relação aos estádios V3 e R1. O período latente médio (PLM) da FA foi 8 e 9 dias para os cultivares BRS 154 e BRS 258, respectivamente. O PLM não se diferenciou em função do estádio fenológico para ambos cultivares. Quanto à influência da idade da folha na suscetibilidade à FA, a folha 1, considerando-se o sentido base-ápice da planta, mostrou maior suscetibilidade e freqüência de infecção de P. pachyrhizi . Os resultados apresentados são essenciais, tanto por disponibilizarem informações sobre a biologia e epidemiologia do fungo, quanto por servirem como base para novos estudos, nas mais diversas áreas sobre este importante patossistema. / Soybean is the agricultural crop with the largest planted area in Brazil. The country stands out in the world scenario as the second-largest producer and exporter of this oilseed crop. The Asian rust (AR), caused by the fungus Phakopsora pachyrhizi, is one of the most serious phytosanitary problems of soybean in Brazil, especially because no cultivars exist so far with satisfactory resistance levels. In order to acquire better knowledge about the biology of Phakopsora pachyrhizi and some factors related to its infectious process in soybean, the following were evaluated in the present work: (1) Uredospore preservation methods; (2) Influence of leaf wetness discontinuity on the infectious process of uredospores; (3) Influence of luminosity and leaf surface on the infectious process of P. pachyrhizi uredospores; (4) Influence of phenological stage of soybean on infection by P. pachyrhizi . The results obtained showed that spore dehydration provided greater spore viability with time, in all storage conditions tested. Spores could be preserved for up to 231 days in the deep freezer, regardless of their hydration condition. At room temperature, non-dehydrated and dehydrated spores remained viable for 16 and 22 days, respectively. Spore dormancy reversion was effective when hydration was used (24h in humid chamber), followed or not by thermal shock (40°C/5 minutes). In all treatments where discontinuous leaf wetting was applied, AR severity was always lower when compared with continuous wetting, especially when wetting was interrupted after 4 hours of initial treatment in the humid chamber. Temporary wetness interruption affected spores that had already germinated, as these were not able to infect after a new wetness period. As to luminosity, uredospores were capable of infecting soybean plants both in the light and in the dark. However, higher severity was observed when the adaxial surface was inoculated, with later incubation of the plants in the dark. The in vitro experiments showed that there was greater germination and greater formation of appressoria in the absence of light. Epicuticular wax content and its ultrastructural aspect did not show differences between the adaxial and abaxial surfaces in cultivar BRS 154. At the R5 reproductive phenological stage, cultivars BRS 154 and BRS 258 showed smaller severity in relation to stages V3 and R1. The AR mean latent period (MLP) was 8 and 9 days for cultivars BRS 154 and BRS 258, respectively. MLP differences due to phenological stage were not detected in any of the cultivars. As to the influence of leaf age on AR susceptibility, leaf 1 showed greater susceptibility and frequency of infection by P. pachyrhizi, considering the plant base-apex direction. The results herein presented are essential, either because they make information available on the biology and epidemiology of the fungus, or because they serve as a foundation for new studies on the most diverse areas about this important pathosystem.

Elevados valores de incidência da podridão apical da goiaba vêm sendo observados em levantamentos recentes no Estado de São Paulo. Entretanto, pouco se conhece sobre a etiologia e influência das variáveis ambientais no monociclo dessa doença. O objetivo desse trabalho foi identificar as espécies de Botryosphaeriaceae que causam a podridão apical e estudar as condições ambientais favoráveis, in vivo e in vitro, para o desenvolvimento do monociclo desses patógenos. Para a identificação das espécies, 56 isolados monospóricos foram obtidos das principais regiões produtoras de goiabas do Estado de São Paulo. Com auxílio da caracterização morfológica e de análises filogenéticas realizadas com dados de sequências de DNA da região ITS e β-tubulina foram identificadas as espécies Fusicoccum aesculi, Neofusicoccum parvum e Neofusicoccum ribis. O crescimento micelial dessas espécies foi avaliado sob as temperaturas de 10, 15, 20, 25, 30, 35 e 40 ºC. A germinação de conídios foi avaliada sob temperaturas de 10, 15, 20, 25, 30, 35 e 40 ºC com períodos de molhamentos de 4, 6, 12, 24 e 48 horas. Nos experimentos in vivo goiabas cv. Kumagai foram inoculadas com suspensões de conídios das três espécies identificadas com auxílio de ferimentos artificiais. Esses frutos foram mantidos sob as temperaturas de 15, 20, 25, 30 e 35 ºC com períodos de molhamento após a inoculação de 6, 12, 24 e 48 horas. Avaliou-se o período de incubação, o diâmetro da lesão ao sétimo dia após a inoculação e taxa de crescimento da lesão. A temperatura ótima para o crescimento micelial de N. ribis foi de 28,2 ºC e não houve diferença entre as temperaturas ótimas de N. parvum e F. aesculi, que foram de aproximadamente 31 ºC. A temperatura ótima para germinação dos conídios foi de 30 ºC para as três espécies. Houve incremento na germinação com o aumento do período de molhamento e na faixa de temperatura ótima encontram-se valores superiores a 70% de germinação a partir do molhamento de 6 horas. A espécie F. aesculi alcança elevadores valores de germinação a 40 ºC em períodos de molhamento superiores a 12 horas. A temperatura ótima para o crescimento da lesão foi de aproximadamente 30 ºC para as três espécies e o período molhamento de 48 horas proporcionou um aumento na severidade da doença quando comparado com o molhamento de 6 horas. Os menores períodos de incubação foram obtidos na temperatura de 30 ºC e com períodos de molhamento de 48 horas após a inoculação. Não houve diferença entre os valores das taxas de crescimento da lesão das três espécies e média das taxas das três espécies foi de 0,4. A doença se desenvolveu melhor em condições de temperaturas elevadas e períodos prolongados de umidade. Esse é o primeiro relato de Neofusicoccum parvum e Neofusicoccum ribis associados à podridão apical no Brasil. / Increased incidence of stylar-end rot in guava fruits have been observed in the São Paulo State - Brazil. However, little is known about its etiology and the influence of environment variables on the monocycle of this disease. This study aimed to identify Botryosphaeriaceae species that cause stylar-end rot in guava and to analyze the favorable environment conditions, in vitro and in vivo, for the monocycle development of this pathogen. We used 56 monosporic isolates from diseased fruit from guava producing regions from the São Paulo State - Brazil. The morphological and phylogenetic analyses performed with sequence data of the ITS region and β- tubulin allowed to identify the species Fusicoccum aesculi, Neofusicoccum parvum and Neofusicoccum ribis, as causal agents of the disease. The mycelial growth was evaluated at 10, 15, 20, 25, 30, 35 and 40 °C. Conidial germination was evaluated at 10, 15, 20, 25, 30, 35 and 40 °C with wetness periods of 4, 6, 12, 24 and 48 hours. In the in vivo experiments, guavas cv. Kumagai were inoculated with conidial suspensions of the three species identified by artificial wounds. The fruits were kept at 15, 20, 25, 30 and 35 °C with wetness periods of 6, 12, 24 and 48 hours after inoculation. We evaluated the incubation period, the lesion diameter on the seventh day after inoculation and the lesion growth rate. The optimum temperature for mycelial growth of N. ribis was 28.2 °C and there was no difference between the optimal temperatures (approximately 31 ºC) for N. parvum and F. aesculi. The optimal temperature for conidial germination was 30 ºC for the three species. There was an increase in germination with the increase of the wetness period. Within the optimal temperature range, values were higher 70% of germination after a wetness period of 6 hours. F. aesculi reached high germination values at 40 °C in wetness periods exceeding 12 hours. The optimal temperature for lesion growth rate was approximately 30 °C for the three pathogens and the wetness period of 48 hours caused higher disease severity as compared with the wetness period of 6 hours. The shortest incubation periods were obtained at 30 ºC with wetness periods of 48 hours. There was no difference between lesion growth rate for the three species and the average rate for three pathogens was 0.4/day. The best conditions for the disease development are high temperatures and prolonged periods of moisture. This is the first report of Neofusicoccum parvum and Neofusicoccum ribis associated with stylarend rot of guava fruits in Brazil.

A soja é a cultura de grãos mais importante no Brasil. Na safra de 2010/11 ocupou uma área de 24 milhões de hectares, se destacando como principal oleaginosa produzida e consumida no mundo. Alguns fatores podem limitar a produção da soja, entre eles as doenças. A mancha- alvo (Corynespora cassiicola) é frequente nas em todas as regiões produtoras de soja no Brasil e nos últimos anos tem se atribuído prejuízos crescentes à doença. Os objetivos deste trabalho foram: determinar a faixa ideal de temperatura para o crescimento micelial de diferentes isolados de C. cassiicola; verificar a esporulação em função do meio de cultura; avaliar a germinação de conídios sob diferentes períodos de molhamento foliar; estudar o efeito da temperatura e molhamento foliar nos componentes monocíclicos e realizar estudos de quantificação de danos. Para avaliar o efeito da temperatura no crescimento micelial, diferentes isolados foram mantidos nas temperaturas de 5°C, 10°C, 15°C, 20°C, 25°C, 30°C e 35°C. A temperatura mínima e máxima estimada pela função beta generalizada para o crescimento micelial foi de 6,9°C e 33°C, respectivamente. A esporulação foi estudada nos meios de cultura BDA e Czapek. Os dados obtidos foram comparados por meio do teste Scott-Knott (P<0,05). A produção de conídios foi variável em função do isolado, tanto em meio BDA como Czapek. O ensaio de germinação foi feito em folhas de soja utilizando-se diferentes períodos de molhamento foliar (2, 6, 12, 24, 48 e 72 horas). A contagem de conídios germinados foi feita em microscópio eletrônico de varredura. A germinação de conídios na superfície das folhas foi verificada a partir do período de 6 horas. Para o estudo dos componentes monocíclicos as temperaturas testadas foram 10ºC, 15ºC, 20ºC, 25 ºC e 30ºC e os períodos de molhamento foliar foram 12, 24, 48 e 72 horas. As variáveis quantificadas foram a severidade, o número e o diâmetro das lesões. Os dados foram ajustados às funções beta generalizada e monomolecular. A temperatura mínima, máxima e ótima capazes de promover o desenvolvimento da mancha-alvo foram de 18°C, 32°C e 27°C, respectivamente. O período de molhamemto foliar de 48 horas resultou em maior desenvolvimento da doença. No ensaio de quantificação de danos, cultivares comerciais foram semeadas em duas épocas. Os componentes avaliados em campo foram: a severidade, a área foliar, o indice vegetativo da diferença normalizada (NDVI) e a produtividade (kg ha-1). Com o uso destes dados foram calculadas a área abaixo da curva de progresso da doença (AACPD), a área abaixo da curva de progresso do índice de área foliar (AULIAPC), o indice de área foliar (LAI), o indice de área foliar sadia (HLAI), a duração da área foliar sadia (HAD) e a absorção da área foliar sadia (HAA). Neste ensaio verificou-se que valores de severidade de até 37% no dossel inferior não causam danos no patossistema C.cassicola - soja. As variáveis HLAI e AULAIPC se correlacionaram com a produtividade e podem ser úteis para estudos futuros de quantificação de danos para este patossistema. / Soybean is the most important grain crop in Brazil. The production of 2010/11 occupied an area of 24 million hectares, becoming the most important oilseed produced and consumed worldwide. Some factors, such as diseases, may limit soybean production. The target spot caused by Corynespora cassiicola is frequent in all soybean producing regions in Brazil and in the past years, an increasing loss has been assigned to it. The aims of the present study were to determine the ideal temperature range for mycelial growth of different isolates of C. cassiicola; verify the sporulation in relation to the culture medium; evaluate the conidia germination under different periods of leaf wetness; study the effect of the temperature and the leaf wetness on the monocyclic components and carry out studies of crop loss in the field. In order to evaluate the effect of the temperature on the mycelial growth, different isolates were cultivated at the temperatures of 5°C, 10°C, 15°C, 20°C, 25°C, 30°C and 35°C. The minimum and maximum estimated temperature by the beta function to provide C.cassiicola mycelial growth was 6.9 °C and 33 °C, respectively. The sporulation was analyzed in PDA and Czapek culture media. The results obtained were compared through the Scott-Knott test (P <0.05). The conidia production varied according to each isolate on both PDA and Czapek medias. The germination test was carried out in soybean leaves using different leaf wetness periods (0, 12, 24, 48 and 72 hours). The germinated conidia measurement was done in a scanning electron microscope. The conidia germination on the leaves surface was observed from 6 hours. The temperatures used to study the monocyclic components were 10 º C, 15 º C, 20 º C, 25 º C and 30 º C and the leaf wetness periods were 12, 24, 48 and 72 hours. The variables quantified were severity, number and diameter of lesions. The data were adjusted to the generalized beta and monomolecular functions. The minimum, maximum and optimum temperature able to promote the development of target spot in soybean leaves were 18 ° C, 32 ° C and 27 ° C, respectively. The 48- hour leaf wetness resulted in greater development of the disease. For damage quantification, commercial cultivars were sown in two sowing times. The components evaluated in the field were: severity, leaf area, normalized difference vegetation index (NDVI) and grain yield (kg ha-1). Using these data, it was calculated the area under disease progress curve (AUDPC), area under the leaf area index progress curve (AULIAPC), leaf area index (LAI), healthy leaf area index (HLAI), healthy area duration (HAD) and healthy area absorption area (HAA). The severity values up to 37% in the lower canopy do not cause crop loss in C.cassicola - soybean pathosystem .The variables HLAI and AULAIPC correlated with grain yield and may be useful for future studies of crop loss for this pathosystem.

O Cancro Cítrico (CC), causado por Xanthomonas axonopodis pv. citri ( Xac) é uns dos mais graves problemas fitossanitário da citricultura paulista. A partir da introdução da Lagarta Minadora dos Citros (LMC), Phyllocnistis citrella, o comportamento do CC mudou drasticamente, tornando-se mais severo. Para compreender a interação de Xac e da LMC em Limão Tahiti foram conduzidos, em condições controladas, três experimentos: (A) influência da via de penetração de Xac (estômato, ferimento mecânico e injúria de LMC das fases ovo, 1º ínstar, 3º ínstar e pupa) e das concentrações de inóculo de 10 1 , 10 2 , 10 4 e 10 6 UFC/mL na infecção de Xac; (B) efeito da idade do ferimento mecânico, da injúria de LMC e da folha intacta no progresso do CC; (C) influência da temperatura e do período de molhamento no desenvolvimento do CC. No experimento A, a concentração mínima de inóculo para causar CC via penetração de Xac por estômato foi de 10 4 UFC/mL; 10 2 UFC/mL para via ferimento mecânico e injúria de LMC na fase ovo e 1º ínstar; e 10 1 UFC/mL para via injúria fase 3º ínstar e pupa. A injúria da fase 3º ínstar e pupa proporcionaram maior severidade em relação às outras vias de penetração nas concentrações testadas (aproximadamente 6 vezes maior que a severidade em folha intacta a 10 6 UFC/mL). As severidades em folha com ferimento mecânico e com injúria da fase ovo e 1º ínstar não diferiram da folha intacta. No experimento B, o ferimento mecânico entre 0 e 6 dias após o ferimento da folha (0 a 6 dias de idade), injúria de LMC entre 0 e 32 dias após a ovoposição de P. citrella na folha (0 a 32 dias de idade) e folha intacta entre 0 e 35 dias após a emissão da folha (0 a 35 dias de idade) foram suscetíveis a Xac. A severidade decresceu linearmente com o aumento da idade do ferimento e da folha intacta. A severidade, em relação à idade de injúria, variou em função do modelo Beta generalizado, com ponto de inflexão aos 18 dias. A máxima severidade estimada em folha com injúria foi 10 vezes maior que em folha intacta. No experimento C, observou-se que para os menores intervalos de aparecimento de lesões e 100% de incidência de CC, as condições ótimas foram de 25 a 35ºC com período mínimo de molhamento de 4 horas. O modelo Beta-monomolecular ajustou-se bem à variação da severidade em função da temperatura e da duração do molhamento foliar. As temperaturas mínima e máxima estimadas foram de 14,9 e 42ºC. A máxima severidade estimada foi determinada para o molhamento de 24 horas a 31,7ºC. Em geral, a injúria de LMC nas fases acima de 3º ínstar influenciou na infecção de Xac possibilitando infecções mesmo em baixas concentrações de inóculo (10 células/mL) e durante um longo período (32 dias). Em folhas com injúria de LMC, a severidade de CC pode ser 10 vezes maior que em folha intacta. As condições favoráveis para a infecção de Xac são de 25 a 35ºC e a bactéria não demanda longos períodos de molhamento foliar (acima de 4 horas). Por esses resultados, conclui-se que a LMC tem papel relevante na epidemiologia do CC. / The Asiatic Citrus Canker (ACC), caused by Xanthomonas axonopodis pv. citri ( Xac) is one of the most serious problems of citrus in São Paulo State, Brazil. After the introduction of Citrus Leafminer (CLM), Phyllocnistis citrella, the behavior of ACC changed drastically, becoming more severe. To understand the interaction of Xac and CLM on Tahiti Lime, it were, under controlled conditions, carried three experiments: (A) influence of the way of Xac penetration (stomata, mechanical wound and CLM injury of the stage: egg, 1st instar, 3rd instar and pupa) and of the inoculum concentrations of 10 1 , 10 2 , 10 4 and 10 6 CFU/mL in the Xac infection; (B) effect of the age of mechanical wound, of CLM injury and of unwounded leaf in the progress of the ACC; (C) influence of the temperature and of the period of leaf wetness in the development of the ACC. In the experiment A, the minimum inoculum concentration to cause ACC by penetration of Xac through stomata was of 10 4 CFU/mL; 10 2 CFU /mL by mechanical wound and CLM injury of egg stage and 1st instar; and 10 1 CFU /mL by injury of 3rd instar and pupa stage. The injury of 3rd instar and pupa stage have generated higher severity in relation to other ways of penetration on all concentrations (about 6 times more than the severity in unwounded leaf on 10 6 CFU /mL). The severities in leaf with mechanical wound and with injury of egg stage and 1st instar have not differed from the unwounded leaf. In the experiment B, the mechanical wound between 0 and 6 days (0-6 days of age), the CLM injury between 0 and 32 days after eggs laying of P. citrella (0-32 days of age) and unwounded leaf between 5 and 35 days (5-35 days of age) have shown susceptibility to Xac. The severity decreased linearly with increasing age of the wound and age of unwounded leaf. In relation to age of injury, the severity varied in function of generalized Beta model and the inflection point was 18 days. The maximum severity in leaf with injury was 10 times bigger than in unwounded leaf. In the experiment C, the optimum conditions appearance of lesions and 100% of incidence were 25-35ºC under minimum wetness duration of 4 hours. The Beta-monomolecular function provided a good description of severity variation in relation to the temperature and duration of leaf wetness. The estimated minimum and maximum temperatures were 14.9 and 42ºC. The estimated maximum severity was determined under wetness of 24 hours and 31.7ºC. In general, the LMC injury (up to 3rd instar stage) has influenced in the Xac infection, it has increased the efficiency of bacterium penetration still on low inoculum concentration and it has allowed Xac infection for long period (32 days). In leaf with CLM injury, the severity can be 10 times bigger than in unwounded leaf. The Xac infection is favored under 25-35ºC and the Xac does not demand long periods of leaf wetness (more than 4 hours).

<p>The main objectives of this thesis are to study if a topographic wetness index (TWI) could be used as a tool for predicting the spatial distribution of vascular plant species richness in the boreal forest as well as to study congruence in species richness between vascular plants, liverworts, mosses and lichens. A wetness index ln(a/tanβ) based on topography was used to assign a specific TWI-value to every 20 x 20m grid in two 25 km2 boreal forest landscapes (differing in average soil pH) in northern Sweden. Soil pH is known to be influenced by groundwater and to affect plant species richness in other biomes. Therefore, the relationships between plant species richness, TWI and soil pH were also studied. </p><p>The results showed that the majority of the investigated boreal forest landscapes were relatively dry and species-poor, whereas interspersed patches linked to areas with relatively high TWI had species-rich vegetation including the species of the drier parts of the landscape. There was a positive relationship between species richness of vascular plants and the TWI in both landscapes, but varied with average soil pH. TWI explained 30 % and 52 % of the variation in plant species richness in the landscape with lower and higher pH, respectively. The proportion of regionally uncommon plants also increased with TWI. Testing different calculation methods of the TWI resulted in a large variation in correlation strengths between the various TWI-values and different measured variables (species richness of vascular plants, soil pH, groundwater flow and soil moisture). The relationship between plant species richness and TWI could be further improved with some of the calculation methods. </p><p>When studying correlations in species richness using data sets from boreal forest in northern Sweden, strong positive correlations among vascular plants, mosses and liverworts were found, but no significant correlation between macrolichens and any of the other groups. This result could be explained by that the species number of each of the three related groups increases with ambient moisture, whereas the species number of macrolichens is weakly associated with moisture. </p><p>In conclusion, the TWI could become a useful tool in conservation management for identifying areas of special interest prior to field inventories. Since vascular plants can be used as an indicator taxon for species richness of mosses and liverworts, high TWI-values indicate areas of species hotspots of these taxa.</p> / <p>Syftet med avhandlingen är att dels studera om ett topografiskt fuktighetsindex skulle kunna vara användbart för att förutsäga fördelningen av kärlväxters artrikedom i boreal skog, dels att studera om den rumsliga fördelningen av artrikedom hos kärlväxter, blad- och levermossor samt lavar sammanfaller.</p><p>Ett fuktighetsindex, ln(a/tanβ), som bara är baserat på topografi användes för att beräkna ett indexvärde för varje 20 x 20 m grid i två 25 km2 stora boreala skogslandskap (med i medeltal olika mark-pH) i norra Sverige. Det är känt att mark-pH påverkas av grundvatten och att pH i sin tur påverkar artrikedom hos kärlväxter i andra biom. Därför studerades även sambanden mellan kärlväxters artrikedom, mark pH och TWI.</p><p>Resultaten visade att större delen av det studerade boreala landskapet var relativt torrt och artfattigt, medan mindre utspridda områden med höga TWI-värden var artrika på kärlväxter och här växte även arter som återfanns i de torra delarna av skogen. Sambandet mellan artrikedom hos kärlväxter och TWI var positivt i båda landskapen, men påverkades av de olika nivåerna på mark-pH. TWI förklarade 30 % av variationen i artrikedom i området med lägre mark-pH respektive 50 % i området med högre mark-pH. Andelen kärlväxter som klassificeras som icke vanliga i respektive region ökade också med TWI. Med andra beräkningsmetoder för TWI visade det sig att styrkan på korrelationerna mellan TWI och olika uppmätta variabler (artrikedom hos kärlväxter, mark-pH, grundvattennivå och markfuktighet) varierade mycket. Sambandet mellan artrikedom hos kärlväxter och TWI kunde förbättras ytterligare med vissa beräkningsmetoder.</p><p>Då korrelationer i artrikedom studerades användes ett dataset från boreal skog i norra Sverige. Resultaten visade på starka, positiva korrelationer mellan kärlväxter, blad- och levermossor, men inga korrelationer mellan någon av dessa grupper och lavar. Detta kunde förklaras med att artrikedom hos de tre korrelerande organismgrupperna ökar med ökad fuktighet, medan artrikedom hos lavar inte är kopplat till fukt.</p><p>Huvudslutsatsen i avhandlingen är att TWI, som endast är baserad på topograpfiskt data, skulle kunna bli ett värdefullt redskap i naturvårdsplanering för att identifiera särskilt intressanta skogsområden innan man gör fältinventeringar. Eftersom studien visar att kärlväxter kan användas som en indikator grupp för artrikedom hos blad- och levermossor indikerar höga TWI-värden områden med hög artrikedom även vad gäller dessa taxa.</p>

Lhumectation des surfaces végétales, due principalement aux précipitations sous forme de pluie ou de rosée, joue un rôle déterminant lors de la phase de contamination des plantes par de nombreux agents phytopathogènes. La connaissance de la pluie et de la rosée constitue un élément fondamental pour létude et la compréhension du fonctionnement des modèles de simulation des épidémies et des systèmes d'avertissements agricoles. Lobjectif de cette recherche est de contribuer à lamélioration du système davertissement des principales maladies cryptogamiques affectant le blé dhiver au sud de Belgique et au G-D de Luxembourg. Notre démarche a consisté, dans un premier temps à évaluer les potentialités du radar météorologique de Wideumont. Nous avons décrit son fonctionnement général ainsi que son principe de mesure et nous avons détaillé les différentes sources derreur qui affectent les estimations de précipitations dérivées des observations radar. Les mesures radar sont moins précises que les mesures de précipitations par des pluviomètres. Néanmoins, le radar permet dobserver en temps réel les précipitations sur un large domaine avec une très bonne résolution spatiale et temporelle. La comparaison quantitative et qualitative des précipitations mesurées au sol avec celles estimées par le radar a été faite sur une période de trois ans (2003, 2004 et 2005). Les résultats de la validation des cumuls mensuels font apparaître que le radar a tendance à sous-estimer les précipitations. Lerreur calculée pour lensemble des stations varie entre -50% et +12%. La validation qualitative du radar a été réalisée sur des occurrences de cumuls horaires. Les indices calculés à partir des tables de contingence donnent des valeurs de POD (Probability Of Detection) entre 0.44 et 0.80 durant la période étudiée. Limpact des estimations radar sur les périodes dinfection de Septoria tritici simulées par PROCULTURE a été évalué durant trois saisons culturales (2003, 2004 et 2005) par comparaison entre les données de sortie du modèle (alimenté par des estimations radar de précipitations horaires) et les estimations visuelles du développement des symptômes de la maladie sur les trois dernières feuilles. Les outputs de PROCULTURE via les données radar ont montré un grand accord entre la simulation et lobservation. Le radar météorologique devrait dès lors être bénéfique pour des régions où le réseau des pluviomètres est inexistant (ou moins dense) et où lincidence de la septoriose est importante. Dans un deuxième temps, sur base dune recherche bibliographique, un modèle dhumectation a été choisi. Le modèle sélectionné, appelé SWEB, se base sur le bilan énergétique et le bilan hydrique. Il simule la durée dhumectation due à la pluie et à la rosée sur lensemble du couvert végétal à partir des données issues des stations agrométéorologiques. Le modèle a été ensuite testé et validé sur différentes variétés de blé dhiver. Les données de sortie du modèle ont été comparées statistiquement aux mesures des capteurs (préalablement calibrés) et aux données dobservation obtenues sur des parcelles expérimentales et au champ durant les saisons culturales 2006 et 2007. Sur base des résultats obtenus, le modèle SWEB semble sous-estimer la durée dhumectation et plus particulièrement pour les événements de la fin dhumectation (dryoff). Lerreur moyenne en général est inférieure à 90 minutes. Dans un troisième temps, afin dobtenir une relation entre les périodes dhumectation et le développement de la septoriose sur les trois dernières feuilles, les périodes dhumectation simulées par SWEB ont été comparées dune part aux périodes dinfection de Septoria tritici simulées par PROCULTURE et dautre part aux estimations visuelles. Le modèle de la durée dhumectation simule avec succès des périodes dhumectations, dues à la fois à la rosée et à la pluie, qui ont déclenché linfection de la septoriose observée sur des parcelles expérimentales. Une durée minimale dhumectation favorable à linfection des feuilles de blé par Septoria tritici a été déterminée. Il est donc désormais nécessaire délaborer un système opérationnel intégrant le radar météorologique, le modèle de la durée dhumectation et le modèle épidémiologique. Notre travail a permis dacquérir via lanalyse des données agrométéorologiques et des données phytopathologiques, les connaissances nécessaires à lélaboration dun tel système et de participer ainsi à lamélioration des modèles davertissements existants. En effet, nous avons analysé les avantages et les limites du système radar comme données dentrée aux modèles et son aptitude dans la spatialisation des données. Nous avons également testé le modèle dhumectation pour la détermination des périodes dinfection nécessaires au développement de la septoriose. Dans une perspective dune meilleure opérationnalisation du système, lapproche envisagée pourrait facilement être intégrée dans le système existant pour la simulation dautres maladies comme les rouilles, loïdium et la fusariose à léchelle régionale. En définitive, ce travail aura prouvé une fois de plus lintérêt du "mariage" entre lagrométéorologie et la phytopathologie. [en] Summary - Weather-Radar Rainfall Measurement and Simulated Surface Wetness Duration for Septoria Leaf Blotch Risk Assessment. The persistence of free moisture on leaves, mainly as a result of precipitation in the form of rainfall or dew, plays a major role during the process of plant infection by most fungal pathogens. Acquiring rainfall and leaf moisture information is needed for accurate and reliable disease prediction and management. The objective of this research is to contribute to improve forecasting Septoria leaf blotch and other fungal pathogens on winter wheat in Belgium and Luxembourg./In the first part of this work, the potential of weather-radar rainfall estimates for plant disease forecasting is discussed. At first step, we focused on assessing the accuracy and limitations of radar-derived precipitation estimates, compared with rain-gauge data. In a second step, the Septoria leaf blotch prediction model PROCULTURE was used to assess the impact on the simulated infection rate of using, as input data, rainfall estimated by radar instead of rain gauge measurements. When comparing infection events simulated by PROCULTURE using radar-derived estimates and reference rain gauge measurements, the probability of detection (POD) of infection events was high (0.83 on average), and the false alarm ratio (FAR) of infection events was not negligible (0.24 on average). FAR decreased to 0 and POD increased (0.85 on average) for most stations, when the model outputs for both datasets were compared against visual observations of Septoria leaf blotch symptoms. Analysis of 148 infection events observed over three years at four locations showed no significant difference in the number of simulated infection events using either radar assessments or gauge measurements. This suggests that, for a given location, radar estimates are just as reliable for predicting infection events as rain gauges. As radar is able to estimate rainfall occurrence over a continuous space, unlike weather station networks that do observations at only a limited number of points, it has the great advantage of being able to predict the risk of infection at each point within an area of interest with an accuracy equivalent to rain gauge observations. This gives radar an important advantage that could significantly improve existing warning systems. In the second part, a physical model based on the energy balance, known as the Surface Wetness Energy Balance (SWEB), was applied for the simulation of Surface Wetness Duration (SWD) on winter wheat canopy. The model, developed in the United States on grapes canopies, was adapted for the winter wheat cultivars and was applied for use with agrometeorological data easily available from standard weather stations and weather-radar rainfall estimates. The SWEB model simulates surface wetness duration for both dew and rain events. The model was validated with data measured by sensors and with visual observations of SWD conducted in experimental plots during two cropping seasons in 2006 and 2007. The wetness was observed visually by assessing the presence or absence of surface water on leaves. Based on the results, the SWEB model appeared to underestimate surface wetness duration and especially for the dry-off events when compared statistically to visual observations. The error, on average, is generally less than 90 minutes. In order to establish a relationship between the surface wetness periods and Septoria leaf blotch development risk on the top three leaves, the SWEB model SWD outputs were compared with the number of hours of high probability of infection simulated by PROCULTURE as well as with visual plant diseases observations. A minimal surface wetness duration of favourable infection conditions for Septoria tritici was established. It is now required to develop an operational system that would integrate weather radar, surface wetness duration and foliar epidemic model. In this work, we have analyzed the advantages and limitations of the radar system as input to models and its ability for spatial interpolation of rainfall. We also tested the model for the determination of surface wetness periods required for Septoria Leaf Blotch Risk development. The proposed approach could be integrated in the existing system. Finally this approach shows once more the "happy marriage" between agrometeorology and plant disease management.

The main objectives of this thesis are to study if a topographic wetness index (TWI) could be used as a tool for predicting the spatial distribution of vascular plant species richness in the boreal forest as well as to study congruence in species richness between vascular plants, liverworts, mosses and lichens. A wetness index ln(a/tanβ) based on topography was used to assign a specific TWI-value to every 20 x 20m grid in two 25 km2 boreal forest landscapes (differing in average soil pH) in northern Sweden. Soil pH is known to be influenced by groundwater and to affect plant species richness in other biomes. Therefore, the relationships between plant species richness, TWI and soil pH were also studied. The results showed that the majority of the investigated boreal forest landscapes were relatively dry and species-poor, whereas interspersed patches linked to areas with relatively high TWI had species-rich vegetation including the species of the drier parts of the landscape. There was a positive relationship between species richness of vascular plants and the TWI in both landscapes, but varied with average soil pH. TWI explained 30 % and 52 % of the variation in plant species richness in the landscape with lower and higher pH, respectively. The proportion of regionally uncommon plants also increased with TWI. Testing different calculation methods of the TWI resulted in a large variation in correlation strengths between the various TWI-values and different measured variables (species richness of vascular plants, soil pH, groundwater flow and soil moisture). The relationship between plant species richness and TWI could be further improved with some of the calculation methods. When studying correlations in species richness using data sets from boreal forest in northern Sweden, strong positive correlations among vascular plants, mosses and liverworts were found, but no significant correlation between macrolichens and any of the other groups. This result could be explained by that the species number of each of the three related groups increases with ambient moisture, whereas the species number of macrolichens is weakly associated with moisture. In conclusion, the TWI could become a useful tool in conservation management for identifying areas of special interest prior to field inventories. Since vascular plants can be used as an indicator taxon for species richness of mosses and liverworts, high TWI-values indicate areas of species hotspots of these taxa. / Syftet med avhandlingen är att dels studera om ett topografiskt fuktighetsindex skulle kunna vara användbart för att förutsäga fördelningen av kärlväxters artrikedom i boreal skog, dels att studera om den rumsliga fördelningen av artrikedom hos kärlväxter, blad- och levermossor samt lavar sammanfaller. Ett fuktighetsindex, ln(a/tanβ), som bara är baserat på topografi användes för att beräkna ett indexvärde för varje 20 x 20 m grid i två 25 km2 stora boreala skogslandskap (med i medeltal olika mark-pH) i norra Sverige. Det är känt att mark-pH påverkas av grundvatten och att pH i sin tur påverkar artrikedom hos kärlväxter i andra biom. Därför studerades även sambanden mellan kärlväxters artrikedom, mark pH och TWI. Resultaten visade att större delen av det studerade boreala landskapet var relativt torrt och artfattigt, medan mindre utspridda områden med höga TWI-värden var artrika på kärlväxter och här växte även arter som återfanns i de torra delarna av skogen. Sambandet mellan artrikedom hos kärlväxter och TWI var positivt i båda landskapen, men påverkades av de olika nivåerna på mark-pH. TWI förklarade 30 % av variationen i artrikedom i området med lägre mark-pH respektive 50 % i området med högre mark-pH. Andelen kärlväxter som klassificeras som icke vanliga i respektive region ökade också med TWI. Med andra beräkningsmetoder för TWI visade det sig att styrkan på korrelationerna mellan TWI och olika uppmätta variabler (artrikedom hos kärlväxter, mark-pH, grundvattennivå och markfuktighet) varierade mycket. Sambandet mellan artrikedom hos kärlväxter och TWI kunde förbättras ytterligare med vissa beräkningsmetoder. Då korrelationer i artrikedom studerades användes ett dataset från boreal skog i norra Sverige. Resultaten visade på starka, positiva korrelationer mellan kärlväxter, blad- och levermossor, men inga korrelationer mellan någon av dessa grupper och lavar. Detta kunde förklaras med att artrikedom hos de tre korrelerande organismgrupperna ökar med ökad fuktighet, medan artrikedom hos lavar inte är kopplat till fukt. Huvudslutsatsen i avhandlingen är att TWI, som endast är baserad på topograpfiskt data, skulle kunna bli ett värdefullt redskap i naturvårdsplanering för att identifiera särskilt intressanta skogsområden innan man gör fältinventeringar. Eftersom studien visar att kärlväxter kan användas som en indikator grupp för artrikedom hos blad- och levermossor indikerar höga TWI-värden områden med hög artrikedom även vad gäller dessa taxa.

Supercapacitors are important electrochemical energy storage devices for microelectronic and telecommunication systems, electric cars, and smart grids. However, the energy densities of existing supercapacitors are still inadequate for many applications. Vanadium oxides have been studied as viable supercapacitor alternatives, with varying results. Methods are often complicated or time-consuming, and electrode fabrication often includes carbon powder and binder. The objective of this work was to study the effect of processing conditions on specific capacitance of supercapacitors based on vanadium oxides coated on carbon fiber papers. This study was conducted to form easily-fabricated compounds of vanadium oxides which could offer promise as pseudocapacitor material, and to nucleate these compounds directly onto inexpensive carbon fiber without binder. The incipient wetness impregnation technique was used to fabricate the electrodes. Electrochemical performance of the resulting electrodes was tested in a Swagelok-type electrochemical two-electrode cell, and the electrodes were characterized by XRD and SEM. Interesting nanofeatures were formed and the vanadium oxides exhibited pseudocapacitance at a respectable level.

In boreal catchments, stream water chemistry is influenced and controlled by several landscape factors. The influence of spatially distributed variables is in turn dependent on the hydrological scale. Headwater streams have larger variability of water chemistry, and thus together represent a large biodiversity, and therefore need to be monitored in official environmental assessments. One objective of this study was, using Geographical Information Systems (GIS), to analyse co-variation between landscape variables and water chemistry and to determine which of the landscape variables have a major influence on the concentration of dissolved organic carbon (DOC) in headwater streams. Another objective was to find a simple method for predicting sources of DOC, using official map data and publically available GIS applications. Totally 85 headwater catchments (0.1-4 km2) in the county of Värmland, western south Sweden, were used in the study. Water chemistry was analysed for water sampled at low, medium and high flows, and landscape variables were extracted from official map data sources: topographic maps, a digital elevation model (DEM, 50 m grid), and vegetation data. Statistical analyses showed that topography (mean slope and mean topographic wetness index (TWI)) and wetland cover often correlated well with DOC in headwater catchments. Official map data could satisfactorily extract landscape variables (mean slope, mean TWI) that were useful in predicting stream water chemistry (DOC). A high-resolution elevation model, which was generated by interpolation of photogrammetric data, was used to calculate and evaluate two different wetness indices and their ability to predict the occurrence of wetlands in six catchments of different sizes and topography. The SAGA (System for Automated Geoscientific Analyses) wetness index (SWI) gave substantially better results than the TWI. The effects of resolution of DEMs on calculations of the SWI were investigated using 5, 10, 25 and 50 m grids. The results showed that SWI values increased with increasing cell size. The near linear increment of mean values for resolutions 10-50 m suggests a independence of terrain type and catchment size, which supported previous findings that indicated that mean slope and mean wetness index calculated from coarse elevation models may be used for prediction of DOC in headwater streams.

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / Social demands on soil information have grown dramatically, meanwhile the soil surveys are seldom carried out in the country. Digital soil mapping techniques can be applied to infer the spatial distribution of soil from existing soil maps or from reference areas, extrapolating this information to areas not mapped. The purpose of this study was to apply in a Geographic Information System the Multiple Logistic Regressions (MLR) using Principal Components (PC) as explanatory variables to predict soil classes spatial distribution. The study area was the region of municipality São Pedro do Sul / RS. For the development of predictive models a set of nine terrain attributes were used. Model training was executed on an existing soil map and with a survey carried out in a reference area, both in a 1:50.000 scale. The first three retained PC explained 65.57% of the data variability. The predictive models which used PC had lower values of kappa index. The most accurate predicted map reached a kappa value of 63.20% and was generated by using the nine attributes of land as predictive covariates. The mapping accuracy is sensitive to similarities between the mapped classes, and mapping in a more homogeneous categorical level reduces the accuracy of the predicted maps. Soil classes relatively not representative in the training maps are not properly spatialized. The use of MLR allows spatializing of soil classes to areas not mapped, although the use of PC needs to be tested with a larger number of covariates. / As demandas da sociedade pela informação solo têm crescido, porém levantamentos pedológicos praticamente não ocorrem mais no país. Técnicas de Mapeamento Digital do Solo podem ser empregadas para inferir a distribuição espacial de classes de solos a partir de mapas existentes e áreas de referência, extrapolando esta informação para áreas não mapeadas. O objetivo deste estudo foi empregar em um Sistema de Informações Geográficas as Regressões Logísticas Múltiplas (RLM) utilizando-se de Componentes Principais (CP) como variáveis explicativas para a predição espacial de classes de solos. A área de estudo foi na região do município de São Pedro do Sul / RS. Para o desenvolvimento dos modelos preditivos foram utilizados um conjunto de nove atributos do terreno. O treinamento dos modelos foi executado em um mapa de solos existente, e em um levantamento realizado em áreas de referência, ambos na escala 1:50.000. As três primeiras CP retidas explicaram 65,57% da variabilidade dos dados. Os modelos preditivos que empregaram CP obtiveram menores valores do índice kappa. O mapa predito mais acurado empregou os nove atributos do terreno e alcançou um valor de kappa de 63,20%. A acurácia do mapeamento é sensível a semelhança entre as classes mapeadas, e o mapeamento em níveis categóricos mais homogêneos reduz a precisão dos mapas preditos. Classes de solos relativamente pouco representativas não são corretamente espacializadas. O emprego de RLM permite espacializar classes de solos para áreas não mapeadas, embora o emprego de CP necessite ser testado com um maior número de covariáveis.