Southern Appalachian Phalaris arundinacea control was investigated by: 1) correlating cover and species richness with soil characteristics across transects; 2) burning and herbicide use to determine conditions facilitating native plant establishment; and 3) hemi-parasitic Pedicularis lanceolata tested as a biological control. Phalaris cover was correlated with subsoil consolidation; areas without Phalaris had consolidated subsoil while Phalaris at >50% cover established on loose soil. Phalaris cover inhibited species richness (r2=0.78). No soil characteristic predicted species richness. Herbicide reduced Phalaris cover and aerial biomass by 23% and 63% respectively, compared to controls. Burning was ineffective. Two summers after herbicide Phalaris subterranean biomass remained 32% less than control biomass. Monocot transplants established readily following herbicide but dicot transplants were less likely to survive. Pedicularis parasitized Phalaris. Pedicularis’ effect on a mixed species total (r2=0.735) was non-linear; implying greater effect on large plants. Non-parasitic native plant species competition reduced biomass of Phalaris by 40%.

Les interactions entre les végétaux et les organismes telluriques sont déterminantes pour la décomposition des matières organiques et la nutrition minérale des plantes. L’objectif général de la thèse était de comprendre comment les interactions multi-trophiques dans la rhizosphere agissent sur la disponibilité en azote minéral et l’allocation en carbone dans la plante. Nous avons mis au point des dispositifs de culture de plante, permettant de contrôler l’environnement biotique des racines (inoculation par des espèces symbiotiques modèles : un protozoaire bactériophage et/ou une espèce mycorhizienne à arbuscules). Nous avons utilisé l’azote 15N et le carbone 13C pour tracer le cheminement de l’azote du sol vers la plante et le carbone assimilé par photosynthèse, de la plante vers le sol et les microorganismes du sol. L’allocation de C vers les racines et la rhizosphère est dépendante de la qualité de la litière foliaire enfouie. La structure de la communauté microbienne déterminée par l’analyse des profils d’acides gras (PLFA) est modifiée par la présence de protozoaires pour la litière à C/N élevé. Les mycorhizes à arbuscules et les protozoaires présentent une complémentarité pour l’acquisition du C et de N par la plante. Les protozoaires remobilisent l’azote de la biomasse microbienne par leur activité de prédation. Les hyphes fongiques transportent du C récent issu de la plante vers des sites riches en matière organique non accessibles aux racines. Ainsi, l’activité de la communauté microbienne est stimulée et la disponibilité en N augmentée lorsque des protozoaires sont présents. Les perspectives de ce travail sont de déterminer si (i) les interactions étudiées dans ce dispositif modèle peuvent être généralisées à d’autres interactions impliquant d’autres espèces de champignons mycorhiziens et de protozoaires (ii) la phénologie de la plante et la composition des communautés végétales influence la nature et l’intensité des réponses obtenues / Plants interact with multiple root symbionts for fostering uptake of growth-limiting nutrients. In turn, plants allocate a variety of organic resources in form of energy-rich rhizodeposits into the rhizosphere, stimulating activity, growth and modifying diversity of microorganisms. The aim of my study was to understand how multitrophic rhizosphere interactions feed back to plant N nutrition, assimilate partitioning and growth. Multitrophic interactions were assessed in a single-plant microcosm approach, with arbuscular mycorrhizal fungi (Glomus intraradices) and bacterial feeding protozoa (Acanthamoeba castellanii) as model root symbionts. Stable isotopes enabled tracing C (13C) and N (15N) allocation in the plant and into the rhizosphere. Plant species identity is a major factor affecting plant-protozoa interactions in terms of N uptake and roots and shoot morphology. Plants adjusted C allocation to roots and into the rhizosphere depending on litter quality and the presence of bacterial grazers for increasing plant growth. The effect of protozoa on the structure of microbial community supplied with both, plant C and litter N, varied with litter quality added to soil. AM-fungi and protozoa interact to complement each other for plant benefit in C and N acquisition. Protozoa re-mobilized N from fast growing rhizobacteria and by enhancing microbial activity. Hyphae of AM fungi acted as pipe system, translocating plant derived C and protozoan remobilized N from source to sink regions. Major perspectives of this work will be to investigate whether (i) multitrophic interactions in our model system can be generalized to other protozoa-mycorrhiza-plant interactions (ii) these interactions are depending on plant phenology and plant community composition

The anti-inflammatory properties of four medicinal plants were investigated. These plant extracts were subjected to screening for their possible effects as antioxidative, analgesic, and anti-inflammatory agents. In the antioxidant activity, the Plantago lancelota extracts resulted in an IC50 value of 0.4 mg/mL compared to the positive control quecertin with IC50 0.04 mg/mL Plantago lanceolata inhibited COX-2 activity with IC50 values of 0.41 mg/mL. However, the COX-1 inhibition indicated an IC50 of 68.99 mg/mL. The lipoxygenase assay indicated that Plantago lanceolata was the most active plant species with an IC50 value of 4.86 mg/mL compared to the positive control (quecertin) with an IC50<2mg/mL. The nitric oxide assay of the plant extracts indicates a dose-dependent activity of our plant extracts. Likewise the cell viability result indicated a good activity at dose 100 mg/mL. / Life and Consumer Sciences / M. Sc. (Life Sciences)

Specialization on insect and animal pollinators is thought to be the driving force for the evolution of floral traits. Specifically in the New World (NW), the oil-bee pollination syndrome has led to the convergence of floral characters in two distantly related families of core eudicots, Malpighiaceae and Krameriaceae. Both families display a flag-like structure that establishes a zygomorphic flower and floral oil rewards in epithelial elaiophores. These traits work concomitantly to attract and reward female oil-bees that help fertilize these flowers and in return receive oils. The underlying genetics of floral zygomorphy were studied in several clades of core eudicots, which implicated CYCLOIDEA2-(CYC2-)like genes of the TCP gene family to play a role in the establishment and maintenance of this trait. In Malpighiaceae, previous work demonstrated that two CYC2-like genes, CYC2A and CYC2B, are expressed during development correlated with establishing zygomorphy in flowers of NW Malpighiaceae. In this thesis work, I investigated the underlying developmental and genetic basis for the establishment of non-homologous and yet functionally similar traits in the oil-bee pollinated flowers of Malpighiaceae and Krameriaceae. In Chapter 1, I investigated the modification of a conserved CYC2 genetic program in the Old World (OW) acridocarpoids of Malpighiaceae following a major biogeographic disjunction. And in Chapter 2, I studied the floral ontogeny and genetic basis of floral zygomorphy development in Krameria lanceolata Torrey of Krameriaceae. This thesis work sheds light on the significance of the interdisciplinary study of floral symmetry evolution through comparative pollination ecology, development, and genetics.

The anti-inflammatory properties of four medicinal plants were investigated. These plant extracts were subjected to screening for their possible effects as antioxidative, analgesic, and anti-inflammatory agents. In the antioxidant activity, the Plantago lancelota extracts resulted in an IC50 value of 0.4 mg/mL compared to the positive control quecertin with IC50 0.04 mg/mL Plantago lanceolata inhibited COX-2 activity with IC50 values of 0.41 mg/mL. However, the COX-1 inhibition indicated an IC50 of 68.99 mg/mL. The lipoxygenase assay indicated that Plantago lanceolata was the most active plant species with an IC50 value of 4.86 mg/mL compared to the positive control (quecertin) with an IC50<2mg/mL. The nitric oxide assay of the plant extracts indicates a dose-dependent activity of our plant extracts. Likewise the cell viability result indicated a good activity at dose 100 mg/mL. / Life and Consumer Sciences / M. Sc. (Life Sciences)

During photosynthesis Plantaginaceae species can produce glucose derivatives such as iridoid glycosides and alcohol sugars that in addition to sucrose can be exported from leaves. Plantago lanceolata transported sorbitol in addition to sucrose especially at warmer leaf temperatures. However, two iridoids, catalpol and aucubin, found in P. lanceolata were not readily labelled from 14CO2 under any conditions examined. In contrast, in two greenhouse, cut-flower cultivars of Antirrhinum majus the iridoids, antirrhinoside and antirrhide, were readily 14C-labelled along with sucrose but little 14C was recovered in alcohol sugars (e.g., mannitol). The amount of 14C-partitioned into antirrhinoside increased at higher temperatures. Exposing leaves of P. lanceolata and A. majus to reduced-photorespiratory conditions (e.g. short-term CO2 enrichment and/or low O2) increased fixation and export. Under low O2 in P. lanceolata sorbitol 14C-labelling increased relative to sucrose and in A. majus 14C-labelling of sucrose increased relative to antirrhinoside. Also 14C-labelling of antirrhide increased more than antirrhinoside. During both short-term and long-term acclimation to high CO2, whole plant NCER, leaf photosynthesis and export increased in A. majus. Taken together the temperature and CO2 enrichment studies show plasticity in Plantaginaceae species to synthesize and transport sucrose and auxiliary glucose esters and alcohol sugars in a species-specific manner (depending on the rate of carboxylation).

There is concern that climate change may cause mismatches between timing of flowering and activity of pollinators (phenology). However, concluding that mismatches will occur, and have serious consequences for pollination services, requires assumptions that have not yet been tested. I begin by discussing a set of these assumptions, bringing past research into the context of mismatch. Briefly, the assumptions are that 1) dates of first-flowering or emergence (DFFE) correctly describe phenology (and therefore mismatch); 2) differences in DFFE represent the magnitude of mismatch; 3) advancement of DFFE will be the primary phenological change; 4) shifts will be random and independent for each species; 5) populations of plants and pollinators are “bottom-up” regulated by their mutualistic interactions; 6) all interactions are of similar strength and importance; 7) dispersal, and the spatial context of phenological mismatches can be ignored; and ecological processes including 8) phenotypic plasticity and adaptive evolution of phenology, 9) competition and facilitation, and 10) emergence of novel interactions, will not affect mismatches. I then describe novel experiments, which could help to account for some of these assumptions, clarifying the existence and impacts of mismatches. Next, I present an original field experiment on factors affecting seed set in an alpine meadow in the Coast Range of British Columbia, Canada. I found evidence contradicting the assumption that seed set is primarily limited by pollination. My data highlight the roles of phenology, temperature (degree-days above 15°C, and frost hours), and interactions with pollinators (mutualists) and seed-predators (floral antagonists) in driving patterns of seed set. Seed set of early and late-flowering species responded differently to a 400m elevation gradient, which might be explained by phenology of bumble bees. My data suggest that the consequences of mismatch may be smallest for plants that are fly-pollinated and self-fertile. Non-selfing, bee-pollinated species might be more prone to reproductive limitation through mismatch (affected by snowmelt and cumulative degree-days). Plants that are limited by seed-predators might be negatively affected by warming temperatures with fewer frost hours, and extreme events such as late-season frosts and hail storms can prevent plants from setting seed entirely. Overall, my work emphasizes the importance of complementing theory, data-driven simulations, and meta-analyses with experiments carried out in the field. / Graduate

The aim of this study was to isolate and characterize antifungal compounds from the most active medicinal plant species that could be used to address secondary infection problems in immunocompromised patients. An ethnobotanical study was conducted and 45 medicinal plant species used traditionally to treat candidiasis and related infections in HIV/AIDS patients were identified and documented. The most popular plant species used included Acacia caffra, Clerodendrum glabrum, Croton gratissimus, Elaeodendron transvaalense, Faurea saligna, Hippocratea longipetiolata, Osyris lanceolata, Richardia brasiliensis, Schkuhria pinnata, Schotia brachypetala, Spilanthes acmella, Strychnos potatorum, Vangueria infausta subsp. infausta and Withania somnifera. The plant parts used in the therapeutic preparations were roots (26.7%), bark (22.2%), and a combination of roots and bark (17.7%). Decoctions (44.4%), infusions (20%) and macerations (17.7%) were used. Most of the herbal remedies were administered orally. Chemical profiles of the plant species were established by using thin layer chromatography. Leaf extracts of these plant species were tested for antimicrobial activity against two common pathogenic fungal species in humans (Candida albicans and Cryptococcus neoformans) and four nosocomial bacteria (Staphylococcus aureus, Enterococcus faecalis, Escherichia coli and Pseudomonas aeruginosa) using a two-fold serial microdilution method and bioautography. All plant species investigated had some degree of antimicrobial activity against the test microorganisms. The hexane and the acetone extracts of Clerodendrum glabrum, Hippocratea longipetiolata, Schkuhria pinnata and Withania somnifera were the most active with MIC values ranging from 0.06 to 0.08 mg/ml. The most susceptible pathogen to the test samples was C. neoformans while C. albicans was resistant to most of the plant extracts. The water extracts of Withania somnifera and Hippocratea longipetiolata (14%) had MIC < 1 mg/ml against C. albicans. C. neoformans was susceptible to nine water plant extracts (64%) with MIC < 1 mg/ml and the promising activity was observed in Hippocratea longipetiolata and Faurea saligna extracts with MIC values of 0.16 and 0.31 mg/ml respectively. The hexane extract of C. glabrum was the most active against C. albicans with an MIC value of 0.06 mg/ml and total activity of 550 ml/g. In the bioautography, most plant extracts tested had few active compounds, others had no active components at all and this may be attributed to the disruption of synergism by the thin layer chromatography. C. glabrum had eight active antifungal compounds on bioautograms and most of these components were observed in the EMW solvent system. Based on this and its wide distribution in rural areas, C. glabrum was chosen for further study. The antioxidant activity and possible immune boosting potential of the species were determined using 1, 1-diphenyl-2-picrylhydrazyl radical (DPPH), 2, 2’ azinobis-(3-ethylbenzthiazoline-6-sulfonic acid (ABTS) and ferric reducing antioxidant power (FRAP) assays. In the DPPH qualitative assay, the aqueous plant extracts had several prominent antioxidant components than the organic plant extracts. The aqueous plant extracts which had the most prominent antioxidant activity were F. saligna with 8 compounds, followed by E. transvaalense, H. longipetiolata O. lanceolata, R. brasiliensis and S.brachypetala, with five compounds each and their Rf values ranged from 0;06 to 0.94. This appears to validate the ethnomedicinal use of the plant species to some extent because decoction is the most common method used in the preparation of the remedy by the traditional healers. With regard to the organic plant extracts, only one plant extract, F. saligna had two prominent antioxidant components at Rf values 0.81 and 0.88. A third of the plant species had a high level of free radical scavenging activities in the DPPH, ABTS and FRAP assays. However, all plant extracts had lower antioxidant activity than the positive control (Trolox) used. The selected plant species were also evaluated for their in vitro toxicity against the Vero monkey kidney cell line using 3-(4, 5-dimethylthiazolyl-2)-2, 5-diphenyltetrazolium bromide (MTT) assay. The acetone plant extracts of O. lanceolata, S. acmella, S. pinnata and S. brachypetala had high cytotoxic activity against Vero cells with IC50 values of 13.7±0, 19.9±0.001, 21.6±0.001 and 28.34±0.001 μg/ml respectively. However, their IC50 values were higher than that of the positive control, doxorubicin (IC50 = 9.9±0 μg/ml). The rest of the acetone plant extracts (64%) had moderate cytotoxic activity (30 < IC50<100 μg/ml). The aqueous plant extracts were relatively non-toxic to the Vero cells with IC50 values ranging from 137 to > 500 µg/ml. This supports the use of aqueous extracts in the traditional medicine. However, their low selectivity index values ranging from 0.26 to 1.68 suggest that the plant extracts are probably suitable for external use only. Fractionation of the hexane extract of the leaves of C. glabrum by chromatographic techniques yielded six fractions of which fractions C and D had significant antifungal activity (average MIC value = 0.1 mg/ml) against C. albicans and C. neoformans. From these fractions, one new triterpenoid, 3-(1-oxobutyl)-11α-hydroxytaraxast-20(30)-ene-24,28-dioic acid (clerodendrumic acid) (1) was isolated along with known heptadecanoic acid (2). C. albicans was relatively insensitive to clerodendrumic acid (1) (MIC value = 125 µg/mL) and was resistant to heptadecanoic acid (2) (MIC value = 188 µg/ml). Compounds 1 and 2 were non-toxic against monkey kidney Vero cells in vitro with IC50 values of 202.6 and 108.4 µg/ml respectively. Due to its low antifungal activity, the novel compound clerodendrumic acid (1) is not a viable candidate for drug development which could be used to combat candidiasis and related fungal infections. However, due to its relative safety, it may possibly be used as a lead compound to produce new chemically modified active derivatives or could be used together with known antibiotics to mitigate their undesirable side effects. To the best of our knowledge, the isolation of a novel, clerodendrumic acid (1) and a known heptadecanoic acid (2) compounds from leaf extracts of C. glabrum is reported herein for the first time. The results obtained from this study generally substantiate the rationale behind the use of the selected plant species in the traditional medicine to treat candidiasis and related infections to some extent. This study showed the potential of studying traditional medicine in the search for effective plant extracts or new lead compounds that could be developed into drugs for combating microbial infections among the rural poor people. / Thesis (PhD)--University of Pretoria, 2013. / gm2013 / Paraclinical Sciences / Unrestricted