Doenças infecciosas parasitárias consideradas negligenciadas representam um grande problema de saúde pública em muitos países e regiões. Os fármacos disponíveis na terapêutica são, em geral, tóxicos e de eficácia discutível. Portanto, a descoberta e o planejamento de novos quimioterápicos são extremamente necessários. Neste contexto, os pró-fármacos dendriméricos podem ser úteis. Porém, é necessário esforço adicional para viabilizar os custos, simplificar as estratégias de síntese e investigar os comportamentos de liberação. Ademais, é importante a melhoria dos métodos analíticos, dos métodos de purificação e identificação dos produtos de síntese, para a determinação das propriedades físico-químicas e atividade biológica, visando à efetiva aplicação desta tecnologia. Face ao exposto, o objetivo deste trabalho foi estudar a identidade, pureza e liberação de dois potenciais pró-fármacos dendriméricos, baseados em 3- hidroxiflavona, planejados para serem ativos em doença de Chagas e leishmaniose. O primeiro, estruturalmente, contendo inositol como núcleo e ramos constituídos por éster da 3- hidroxiflavona com ácido málico e o segundo, estruturalmente contendo o dendrímero PAMAM-G0 (poliamidoamina de geração inicial) como transportador e ácido succínico como espaçante. Desenvolveram-se métodos adequados à determinação da 3-hidroxiflavona por HPLC-UV (Cromatografia líquida de alto desempenho, com detecção no ultravioleta) e MEKC (Cromatografia eletrocinética micelar). Comparando-se esses métodos, o método por HPLC foi mais sensível, preciso e exato na quantificação da 3-hidroflavona, enquanto o método por eletroforese capilar foi mais rápido e de menor custo. O éster da 3-hidroxiflavona com o ácido málico mostrou-se instável em soluções orgânicas, aquosas em diferentes pH e nas condições reacionais de diversas estratégias de síntese avaliadas, o que impediu a obtenção do dendrímero baseado em inositol como núcleo conforme proposto. Já o dendrímero PAMAM-G0 funcionalizado com 3-hidroxiflavona foi sintetizado, purificado e caracterizado com sucesso. Não se observou liberação da 3-hidroxiflavona a partir desse dendrímero em solução gástrica simulada (pH 1,2) e a mesma foi lenta em soluções tampão com pH entre 5,0 e 8,5, a 37,0 ºC. Ensaios de atividade biológica do PAMAM-G0-SUC-3-OH-FLAV em amastigotas de Trypanosoma cruzi, cepas Y(Curitiba) e Y(SS), comparativamente ao benznidazol e ao nifurtimox, mostraram atividade moderada e baixa seletividade. / Infectious parasitoses considered neglected diseases represent a great health problem for many countries and areas. Drugs available in the therapeutics are, generally, toxics and do not have good efficacy. So, the discovery and design of new chemotherapeutic agents are extremely needed. In this context, dendrimeric prodrugs may be useful. However, additional effort is required to make the costs accessible, to simplify the synthetic strategies and to investigate the behavior of cleavage. The improvement of analytical methods, purification methods and identification of synthetic products, in order to determine the physicochemical properties and bioactivity aiming to effectively implement this technology, is also required. Based on foregoing considerations, the objective of this work was to study the identity, purity and drug release of two potential dendrimeric prodrugs, based on 3-hydroxyflavone, designed to be active in leishmaniasis and Chagas disease. The first structurally contains myo-inositol as the core and branches consisting of esters from 3-hydroxyflavone with malic acid. The second structurally contains PAMAM-G0 dendrimer (initial generation polyamidoamine) as carrier and succinic acid as spacer. Suitable analytical methods for determining 3-hydroxyflavone by HPLC-UV (High Performance Liquid Chromatography) and MEKC (Micellar Electrokinetic Chromatography) have been developed. Comparing these methods, HPLC method showed more sensitivity, precision and accuracy in the quantification of 3-hydroxyflavone, while the capillary electrophoresis method was faster and less expensive. The ester of 3-hydroxyflavone with malic acid showed to be unstable in organic and aqueous solutions, at different pH and at reaction conditions of synthetic strategies evaluated, which prevented the obtaining of dendrimer based on mio-isositol as core. Notwithstanding, PAMAM-G0 dendrimer funcionalized with 3- hydroxyflavone was synthesized, purified and characterized successfully. There were no 3- hydroxyflavone releases from this dendrimer in simulated gastric fluid (pH 1.2) and a slow release was observed in buffer solutions with pH between 5.0 and 8.5, at 37.0 ºC. Submitted to biological assays in amastigotes of two strains of T. cruzi, Y(Curitiba) and Y(SS), compared to benznidazole e nifurtimox, PAMAM-G0-SUCC-3-OH-FLAV showed moderated activity and low selectivity index.

Made available in DSpace on 2017-07-20T12:40:17Z (GMT). No. of bitstreams: 1 Cleverson Santos.pdf: 2904178 bytes, checksum: 85140c2fc4cb486fe6c03e6a011296a3 (MD5) Previous issue date: 2016-05-06 / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / This thesis describes the preparation, characterization and application of electrochemical sensors and biosensors, using different modification techniques, based on Au as transducer. The enzymatic biosensor applied on the detection of pesticide carbaryl was built on a gold electrode functionalized with a monolayer of polyamidoamine dendrimer of fourth generation with a cystamine core (PAMAM-G4) on which it was immobilized the acetylcholinesterase enzyme (AChE), with the aid of glutaraldehyde. After evaluate and determine the best conditions for immobilization of the AChE enzyme (glutaraldehyde concentration of 1% (v/v) and the concentration of enzyme units 496 U. mL-1) on the monolayer of PAMAM, the catalytic activity of the enzyme was evaluated by chronoamperometry in presence of enzymatic substrate AChI obtaining = 2.9 . −1 . The biosensor response for carbaryl detection was based on the inhibition of the enzymatic activity caused by the pesticide. It was verified that 5 min in the pesticide solution is sufficient to block the enzyme active sites. After determining the best conditions for the construction of the biosensor, it was applied for carbaryl detection in the concentration range from 1.0 to 9.0 mol. L-1. The detection and quantification limits were found to be 0.0108 mol. L-1 and 0.032 mol. L-1, respectively. In the second chapter, it is reported the development of an immunosensor applied to qualitative detection of antibodies (AB) T. cruzi. The sensor was built on gold electrode modified with the thiol 3-mercaptopropionic acid (MPA) and the antigens (AG) T. cruzi were covalently immobilized on this surface by the reaction with EDC and NHS. The influence of concentration and of immersion time in the AG solution were evaluated using the techniques of cyclic voltammetry and electrochemical impedance spectroscopy in presence of [Fe(CN)6]3-/4- and the results showed that the best conditions were immersion time of 15 minutes and AG concentration of 0.5 g. L-1.The possible sites of non-specific binding were blocked with bovine serum albumin (BSA). The immersion time in the solution (AB) was also evaluated and the results showed that 30 minutes are sufficient for all specific bonds sites were occupied by AB T. cruzi. Selectivity tests in the absence of AB, only in the serum sample, and in the presence of AB Toxoplasma were performed. The results demonstrated that the immunosensor is selective, since it presented charge transfer resistance (Rct) values in the presence of AB T. cruzi 70% higher than the Rct values in presence of possible interferences.Therefore, the immunosensor presents itself as an alternative to qualitative diagnosis of american trypanosomiasis. In the third chapter, it is reported the modification of carbon graphite electrodes (CG) obtained from dry batteries zinc/carbon with Au microparticles obtained by potentiostatic electrodeposition. The variables involved in the electrodeposition process, such as the gold salt concentration, time and deposition potential were evaluated and optimized using cyclic voltammetry technique in the presence of redox couple [Fe(CN)6]3-/4-. The best conditions for the Au deposition were electrodeposition time of 700 s, potential of +0.3 V and concentration of 10.0 mmol. L-1. In these conditions, Au spherical particles were obtained with an average size of 420 nm, which were homogeneously deposited on the surface of GC electrode and promoted the increase of the electroactive area (GC electrode showed an area of 0.12 cm2 and GC/Au electrode presented an area of 0.25 cm2). The GC/Au electrode was applied for the separation and quantification of dopamine and uric acid present in a mixture. The voltammetric results showed that the GC/Au sensor is selective, once the potential peak separation between the DA and UA species was 370 mV. The detection and quantification limits were found to be 1.86 mol. L-1 and 6.09 mol. L-1 for dopamine and uric acid 17.5 mol. L-1 and 58.5 mol. L-1, respectively. In the development of the three electrochemical devices gold electrodes were used. From the results obtained for the three developed electrochemical devices it can be concluded that high electric conductivity, chemical stability, biocompatibility, ability to miniaturization in the form of microstructures and ease of functionalization of Au electrodes make them suitable conductive matrixes for construction of electrochemical sensors and particularly biosensors. / Esta tese descreve a preparação, caracterização e aplicação de sensores e biossensores eletroquímicos, utilizando diferentes técnicas de modificação baseadas no Au como transdutor. O biossensor enzimático aplicado na detecção do pesticida carbaril foi construído sobre um eletrodo de ouro funcionalizado com uma monocamada do dendrímero poliamidoamina de quarta geração com núcleo de cistamina (PAMAMG4),sobre o qual foi imobilizada com o auxílio de glutaraldeído a enzima acetilcolinesterase (AChE).Após avaliar e determinar as melhores condições de imobilização da enzima AChE (concentração de GLUT 1% (v/v) e concentração de unidades enzimáticas 496 U. mL-1) sobre a monocamada de PAMAM,a atividade catalítica da enzima AChE imobilizada foi avaliada por cronoamperometria na presença do substrato enzimático (AChI) obtendo-se o = 2,9 . −1. A resposta do biossensor na detecção de carbaril foi baseada na inibição da atividade enzimática causada pelo pesticida. Foi constatado que 5 min de imersão na solução do pesticida foram suficientes para que os sítios ativos da enzima fossem bloqueados. Após determinar as melhores condições de construção do biossensor, este foi aplicado na detecção de carbaril na faixa de 1,0 a 9,0 mol. L-1. Os limites de detecção e quantificação encontrados foram de 0,0108 mol. L-1 e 0,032 mol. L-1, respectivamente. No segundo capítulo é relatado o desenvolvimento de um imunossensor aplicado na detecção qualitativa de anticorpos (AB) T. cruzi. O sensor foi construído sobre eletrodo de ouro modificado com o tiol ácido 3-mercaptopropiônico (MPA) e sobre esta superfície foram imobilizados covalentemente pela reação com EDC e NHS, os antígenos (AG) T. cruzi. A influência da concentração da solução de AG e do tempo de imersão nesta solução para a construção do imunossensor foram avaliadas utilizando as técnicas de voltametria cíclica e espectroscopia de impedância eletroquímica na presença de [Fe(CN)6]3-/4- e os resultados demonstraram que as melhores condições foram: tempo de 15 min e concentração de 0,5 g. L-1. Os possíveis sítios de ligações não específicas foram bloqueados com albumina de soro bovino (BSA). O tempo de imersão na solução de AB também foi avaliado. Os resultados mostraram que 30 min são suficientes para que todos os sítios de ligações específicos fossem ocupados pelos AB T. cruzi. Testes de seletividade na ausência de AB,apenas em amostra de soro e também na presença de AB de Toxoplasma foram realizados. Os resultados demonstraram que o imunossensor é seletivo, pois este apresentou valores de resistência de transferência de carga (Rct) na detecção de AB T. cruzi 70% maiores do que na detecção dos possíveis interferentes. Portanto, o imunossensor apresenta-se como uma alternativa no diagnóstico qualitativo de tripanossomíase americana. No terceiro capítulo é descrito a modificação de eletrodos de carbono grafite (CG) obtidos de pilhas secas de zinco/carbono com micropartículas de Au obtidas pela eletrodeposição potenciostática. As variáveis envolvidas no processo de eletrodeposição, tais como concentração do sal de ouro, potencial e tempo de deposição foram avaliadas e otimizadas utilizando a técnica de voltametria cíclica na presença do par redox [Fe(CN)6]3-/4-. As melhores condições foram: tempo de 700 s, potencial de +0,3 V e concentração de 10,0 mmol. L-1. Nestas condições, foram obtidas partículas de Au esféricas com tamanho médio de 420 nm, as quais se apresentaram homogeneamente dispersas sobre toda a superfície do eletrodo de CG e promoveram o aumento da área eletroativa, (o eletrodo CG apresentou uma área de 0,12 cm2 e o eletrodo CG/Au uma área 0,25 cm2). O desempenho do eletrodo CG/Au foi avaliado na separação e quantificação de dopamina e ácido úrico presentes em uma mistura. Os resultados voltamétricos demonstraram que o sensor CG/Au é seletivo, pois apresentou separação de potencial pico de 370 mV entre as duas espécies. Os limites de detecção e quantificação encontrados foram de 1,86 mol. L-1 e 6,09 mol. L-1 para dopamina, e 17,5 mol. L-1 e 58,5 mol. L-1 para ácido úrico, respectivamente. A partir dos resultados obtidos para os três dispositivos eletroquímicos desenvolvidos pode-se concluir que a elevada condutividade elétrica, estabilidade química, biocompatibilidade, possibilidade de miniaturização na forma de microestruturas e a facilidade de funcionalização dos eletrodos de Au fazem destes matrizes condutoras apropriadas para construção de sensores e particularmente biossensores eletroquímicos.

No description available.

Doenças infecciosas parasitárias consideradas negligenciadas representam um grande problema de saúde pública em muitos países e regiões. Os fármacos disponíveis na terapêutica são, em geral, tóxicos e de eficácia discutível. Portanto, a descoberta e o planejamento de novos quimioterápicos são extremamente necessários. Neste contexto, os pró-fármacos dendriméricos podem ser úteis. Porém, é necessário esforço adicional para viabilizar os custos, simplificar as estratégias de síntese e investigar os comportamentos de liberação. Ademais, é importante a melhoria dos métodos analíticos, dos métodos de purificação e identificação dos produtos de síntese, para a determinação das propriedades físico-químicas e atividade biológica, visando à efetiva aplicação desta tecnologia. Face ao exposto, o objetivo deste trabalho foi estudar a identidade, pureza e liberação de dois potenciais pró-fármacos dendriméricos, baseados em 3- hidroxiflavona, planejados para serem ativos em doença de Chagas e leishmaniose. O primeiro, estruturalmente, contendo inositol como núcleo e ramos constituídos por éster da 3- hidroxiflavona com ácido málico e o segundo, estruturalmente contendo o dendrímero PAMAM-G0 (poliamidoamina de geração inicial) como transportador e ácido succínico como espaçante. Desenvolveram-se métodos adequados à determinação da 3-hidroxiflavona por HPLC-UV (Cromatografia líquida de alto desempenho, com detecção no ultravioleta) e MEKC (Cromatografia eletrocinética micelar). Comparando-se esses métodos, o método por HPLC foi mais sensível, preciso e exato na quantificação da 3-hidroflavona, enquanto o método por eletroforese capilar foi mais rápido e de menor custo. O éster da 3-hidroxiflavona com o ácido málico mostrou-se instável em soluções orgânicas, aquosas em diferentes pH e nas condições reacionais de diversas estratégias de síntese avaliadas, o que impediu a obtenção do dendrímero baseado em inositol como núcleo conforme proposto. Já o dendrímero PAMAM-G0 funcionalizado com 3-hidroxiflavona foi sintetizado, purificado e caracterizado com sucesso. Não se observou liberação da 3-hidroxiflavona a partir desse dendrímero em solução gástrica simulada (pH 1,2) e a mesma foi lenta em soluções tampão com pH entre 5,0 e 8,5, a 37,0 ºC. Ensaios de atividade biológica do PAMAM-G0-SUC-3-OH-FLAV em amastigotas de Trypanosoma cruzi, cepas Y(Curitiba) e Y(SS), comparativamente ao benznidazol e ao nifurtimox, mostraram atividade moderada e baixa seletividade. / Infectious parasitoses considered neglected diseases represent a great health problem for many countries and areas. Drugs available in the therapeutics are, generally, toxics and do not have good efficacy. So, the discovery and design of new chemotherapeutic agents are extremely needed. In this context, dendrimeric prodrugs may be useful. However, additional effort is required to make the costs accessible, to simplify the synthetic strategies and to investigate the behavior of cleavage. The improvement of analytical methods, purification methods and identification of synthetic products, in order to determine the physicochemical properties and bioactivity aiming to effectively implement this technology, is also required. Based on foregoing considerations, the objective of this work was to study the identity, purity and drug release of two potential dendrimeric prodrugs, based on 3-hydroxyflavone, designed to be active in leishmaniasis and Chagas disease. The first structurally contains myo-inositol as the core and branches consisting of esters from 3-hydroxyflavone with malic acid. The second structurally contains PAMAM-G0 dendrimer (initial generation polyamidoamine) as carrier and succinic acid as spacer. Suitable analytical methods for determining 3-hydroxyflavone by HPLC-UV (High Performance Liquid Chromatography) and MEKC (Micellar Electrokinetic Chromatography) have been developed. Comparing these methods, HPLC method showed more sensitivity, precision and accuracy in the quantification of 3-hydroxyflavone, while the capillary electrophoresis method was faster and less expensive. The ester of 3-hydroxyflavone with malic acid showed to be unstable in organic and aqueous solutions, at different pH and at reaction conditions of synthetic strategies evaluated, which prevented the obtaining of dendrimer based on mio-isositol as core. Notwithstanding, PAMAM-G0 dendrimer funcionalized with 3- hydroxyflavone was synthesized, purified and characterized successfully. There were no 3- hydroxyflavone releases from this dendrimer in simulated gastric fluid (pH 1.2) and a slow release was observed in buffer solutions with pH between 5.0 and 8.5, at 37.0 ºC. Submitted to biological assays in amastigotes of two strains of T. cruzi, Y(Curitiba) and Y(SS), compared to benznidazole e nifurtimox, PAMAM-G0-SUCC-3-OH-FLAV showed moderated activity and low selectivity index.

Les dendrimères sont très prometteurs du fait de leur structure unique et de leur multivalence. Cependant, leur synthèse souffre de problèmes de défauts de structure et de présence de produits secondaires très similaires. Des approches synthétiques alternatives sont donc fortement désirées. L'objectif de ma thèse consiste à explorer la synthèse sur support solide et l’approche d'autoassemblage pour la préparation de dendrimères.La première partie de ma thèse se concentre sur la synthèse de dendrimères en phase solide. Nous avons tout d'abord développé une méthode de synthèse pour les dendrimères poly(amidoamines) basée sur la chimie des peptides. Nous avons ensuite construit une petite bibliothèque de dendrimères de type triazine en faisant varier la taille et la terminaison des dendrimères pour créer une variété de dendrimères. Nous avons aussi tenté de synthétiser des dendrimères poly(aminoesters) bien que nous n'ayons pu les obtenir du fait du caractère labile de ces dendrimères.La deuxième partie de ma thèse vise à appliquer l’approche d'autoassemblage pour la construction de dendrimères supramoléculaires comme théranostiques combinant l'imagerie et la thérapie. Nous avons synthétisé un petit dendrimère amphiphile portant DOTA pour chélater le Gd (III). Ce dendrimère est capable de s'autoassembler en supramolécule et d’encapsuler l’agent anticancéreux doxorubicine, pour construire des agents théranostiques à base de dendrimères multivalents.L’ensemble de ma thèse se consacre au développement de stratégies en phase solide et de l'autoassemblage pour construire des dendrimères pour les applications dans les domaines biomédicaux et des matériaux. / Dendrimers hold great promise for wide applications thanks to their unique structural architecture and multivalent cooperativity. However, dendrimer synthesis often suffers from structural defects caused by incomplete reactions and difficulties associated with purification. Consequently, alternative synthetic approaches to overcome the limitations of current dendrimer synthesis are in high demand.My first PhD project mainly focuses on establishing novel strategies and methodologies for solid-phase dendrimer synthesis with advantages of convenient complete synthesis and easy purification procedures. We first developed a new and concise solid-phase synthesis of PAMAM dendrimers based on the adoption of peptide synthesis chemistry. We then constructed a small library of triazine dendrimers varying in generations and surface groups with a view to rapidly synthesizing dendrimers with structural diversity. We also strived to synthesize poly(aminoester) dendrimers although we had difficult to get it thorough.My second PhD program aims to apply the self-assembly approach for constructing supramolecular dendrimer theranostics. A small DOTA-conjugated amphiphilic dendrimer with Gd(III)-chelation was synthesized and self-assembled into supramolecular nanomicelles to encapsulate the anticancer drug doxorubicin. The obtained system constitutes a multivalent nanotheranostic to combine imaging purpose with therapeutic utility.In summary, my PhD program mainly contributes to elaborating strategies for dendrimer synthesis using both solid-phase method and self-assembly approach in the view to realizing and broadening their applications in the arenas of biomedical and material sciences.

Cationic polymers have shown potential as gene delivery vectors due to their ability to condense DNA and protect it from cellular and restriction nucleases. Dendrimers are hyperbranched macromolecules with precisely defined molecular weights and highly symmetric branches stemming from a central core. The nanosize, tunable surface chemistries and ease of surface functionalization has made dendrimers an attractive alternative to conventional linear polymers for DNA delivery applications. The commercially available, cationic dendrimer poly(amidoamine) or PAMAM is the most widely studied dendrimer for use as a gene delivery vector. The aim of this dissertation is to provide an increased understanding of the packaging and forces within PAMAM–DNA complexes. In Chapter 4, we will discuss the effect of molecular chain architecture on DNA-DNA intermolecular forces by examining DNA condensed by low generation (G0 & G1) PAMAM and comparing them to comparably charged linear arginine peptides. Using osmotic stress coupled with X-ray scattering, we are able to determine the structure and forces within dendrimer-DNA complexes, or dendriplexes. We show that PAMAM–DNA assemblies display significantly different physical behavior than linear cation–DNA assemblies. In Chapter 5, we examine the role of pH on condensation in these same low generation PAMAM-DNA complexes. PAMAM dendrimers have both terminal primary amines and internal tertiary amines with different pKas of approximately 9 and 6, respectively. We show changes in the pH at condensation greatly influence the resulting packaging as well as the resulting phase behavior for PAMAM dendriplexes. In Chapter 6, we examine the packaging of DNA by G4 PAMAM as a function of the percent zwitterionic modification. Many cationic polymers, including PAMAM, have shown high transfection efficiency in cell culture and potential for in vitro and in vivo applications, but its development is hindered by cytotoxicity in many cell lines and tissues. We hypothesize that zwitterionic PAMAM (zPAMAM) represent a new means to tune polymer-DNA interactions through PAMAM surface charge potentially enhancing intracellular unpackaging while reducing cellular toxicity. These zPAMAM complexes are currently under investigation for their potential as safer and more efficient materials for DNA delivery.

This dissertation is divided into three major sections (one on dendrimers, one on tripodal metal ligands and one on a research oriented chemistry curricula) with a primary focus on different types of multicomponent assemblies. In the first chapter, a system is described that used a multicomponent assembly of AT-PAMAM dendrimers and an indicator, carboxyfluorescein, to detect and identify various polyanions at a low micromolar concentration. The system was able to successfully differentiate twelve anions, many of biological interest, including three tricarboxylates. The tricarboxylates were differentiated based primarily on the regiochemistry of the anionic groups. In the second chapter, further studies with AT-PAMAM dendrimers were carried out to provide some understanding of the thermodynamic origins of binding. Utilizing isothermal titration calorimetry, the binding of the dendrimers to large polyanionic dendrons with increasing numbers of charges was studied. Through these studies, the thermodynamic values of the binding events were obtained allowing us to explore the properties of the dendrimers. The cooperativity of the system was measured, and primarily negative cooperativity determined by the entropic contributions was uncovered. As the dendrimers increased in size, the thermodynamic origins of binding were determined to a greater extent by the entropy of binding. In the third chapter, a novel dynamic ligand system for metal binding is described. In the presence of a metal salt, a heterocyclic aldehyde and a secondary amine with two heterocyclic arms reversibly condense to form a hemiaminal with a tripodal metal binding site. This chapter describes studies on the metal binding ability, the variety of metals that will lead to this formation, the effects of anions and the range of aldehydes that can be used are described. Furthermore, the system’s reversibility was explored. Finally, the use of a bistriazole secondary amine was explored. The modular nature of triazole formation could lead to the introduction of additional functionalities. The fourth chapter discusses how the novel ligand system could be used to study the enantiomeric excess (ee) of chiral thiols. Based upon the system’s ability to form a stable hemiaminal thioether, a CD signal could be generated that is proportional to the amount of a particular enantiomer in solution. Using this system, a calibration curve relating CD signal and ee can be generated giving the ee of an unknown solution. In the final chapter, a look at the Freshman Research Initiative will be carried out with a focus on the ability to teach basic skills in an introductory laboratory through research. Four different skills or techniques will be explored through three different FRI streams,x and how they teach the four skills. Finally, analysis of the success of the program, particularly students’ success in the next laboratory course in the sequence, is discussed, and a model for adopting this type of teaching at other universities is given. / text

This thesis is devoted to the investigation of mechanical properties and self-assembly process of materials at the nanoscale. Various nanostructured materials such as nanoparticles, nanotubes, nanowires and thin films are used as constituent elements of nanodevices. Hence, knowledge of the mechanical properties of materials at the nanoscale is extremely important for understanding their functionality in nanodevices. Mechanical properties of nanostructured materials may significantly differ from those of their bulk counterparts due to the high surface to volume ratio in nanostruc-tures. We particularly focus on the role of the surface region on the stiffness of nanomaterials. We have shown that the stiffness of a nanomaterial can be tuned over a wide range by introducing appropriate coating on the nanostructure surface. We have also explored the effects of the surface region on the stability of various phases in a nanostructure. In the second part of this thesis, we have described the self-assembly process of nanostructures mediated by drendrimers. Self-assembly techniques are frequently used to decorate nanostructures into specific networks. The motivation of this study is to investigate the mechanisms which control the effective interaction and the inter-particle distance between nanoparticle-dendrimer compos-ites. Control over the inter-particle separation is very important since it has a strong influence on the electronic and optical properties of the nanostructures. In the following paragraphs, we sum-marize the results of our study. We start with a brief introduction to the mechanical properties and self-assembly process of nanostructures in the first chapter. A brief review of the work done on these topics in the recent past is presented in this chapter. We discuss the results and conclusions of various experimental and numerical studies on these topics. We also mention the motivation for the studies we have carried out. At the end, we briefly describe the numerical methods (molecular dynamics (MD) and density functional theory (DFT)) which have been used in our investigations. In the second chapter, we discuss the effects of the surface region on the mechanical properties of nanostructures. We have investigated the size and growth direction dependence of the mechanical properties of ZnS nanowires and thin films as a case study. We observe that the Young’s modulus of nanowires and thin films strongly depends on their size and growth direction. This size and growth direction dependence of the stiffness of nanostructured materials can be explained in terms of their surface modifications. Since the energy of the surface region is usually higher than that of the core region in a nanostructure, the surface atoms move their positions to minimize the surface energy. As a result, bond lengths at the surface region are usually different from their bulk values. We observe that in ZnS nanowires and thin films, the average bond length at the surface region is lower than that in the core region which remains unchanged from its bulk value. This decrease in the bond length (or equivalently increase in the bond energy) increases the effective stiffness of the entire nanostructure. As the size of the nanowire/thin film increases, the effect of the surface region gradually decreases and hence the Young’s modulus value converges to the bulk value. Since the surface region has a strong influence on the mechanical properties of nanostructures, the stiffness of a nanostructure can be tuned by modifying the surface region with other materials. In chapter three, we have shown that the stiffness of ZnS nanowires can be tuned by introducing a thin CdS shell on top of the ZnS surface. In general, the stiffness of a nanostructure can be increased (decreased) by coating the surface region with a stiffer (less stiff) material. However, the stiffness of the core/shell nanostructures strongly depends on the properties of the interface between the core and the shell. We observe that the binding energy between the core and shell regions is relatively low due to the lattice mismatch at the interface region of core/shell nanostructures. This lower binding energy strongly affects the stiffness of core/shell nanostructures. We have also shown that thermal properties such as thermal conductivity and melting temperature of core/shell structures can be tuned by changing the coating material. In chapter four, we discuss the effects of the surface region on the stability of various phases in a nanostructure. The surface atoms may stabilize a particular phase in a nanostructure which is not a stable phase in the bulk material. In this chapter, we investigate the stability of the h-MgO phase, an intermediate structure found during the wurtzite to rock salt transformation, in CdSe nanostructures. We observe that this five-fold coordinated phase is more stable at lower temperatures and smaller sizes of the nanowires. The appearance of this phase has not been observed till now in experiments. We show that this phase is not stable for larger CdSe nanocrystals on which the experiments have been done. In the rest of the thesis, we have presented the results of our studies of self-assembly of nanostructures mediated by DNAs and dendrimers. First we describe in chapter five the nature of the effective interaction between two PAMAM dendrimers. Dendrimers are frequently used to coat surfaces of nanoparticles to prevent the nanoparticles from aggregation. The interaction between such nanoparticle-dendrimer composites depends strongly on the nature of the effective interac-tion between dendrimers. We have used fully atomistic MD simulations to calculate the potential of mean force (PMF) between two PAMAM dendrimers. We show that the effective interaction strongly depends on the size (generation) and protonation level of the dendrimers. The PMF profiles of nonprotonated dendrimers show a global minimum which represents the attractive nature of the interaction between the dendrimers up to a certain center-to-center distance. On the other hand, the interaction between protonated dendrimers is repulsive throughout their interaction re-gion. The PMF profiles are fitted very well by a sum of an exponential and a Gaussian function. This observation is in contradiction with some of the results of existing coarse-grained simulations which predicted the effective interaction between dendrimers to be Gaussian. Our atomistic simulation which includes all the local fluctuations is expected to give more accurate results. Information about the effective interaction between two dendrimers helps in understanding how dendrimer molecules can be used to control the interaction strength and the preferred inter-particle distance between two nanostructures. In chapter six, we discuss the effective interaction between two dendrimer grafted gold nanoparticles. We observe that dendrimer molecules can get adsorbed spontaneously on the surface of a gold nanoparticle. These grafted dendrimers significantly alter the interaction between the gold nanoparticles. We have explored the effects of proto-nation level and the density of the grafted dendrimers on the effective interaction between two gold nanoparticle-dendrimer composites. We observe that these nanoparticle-dendrimer composites at-tract each other at low grafting density. However, the interaction strength and the inter-particle distance at the minimum of the potential are much lower and higher, respectively than those between two bare gold nanoparticles. Interestingly at higher grafting density, the nature of the interaction between the nanocomposites depends on the protonation level of the grafted dendrimers. Nanoparticles grafted with nonprotonated dendrimers still attract each other but with lower inter-action strength and higher inter-particle distance compared to the values for low grafting density. On the other hand, nanocomposites grafted with protonated dendrimers repel each other at high grafting density. Thus we show that the effective interaction and the optimal inter-particle distance between the nanostructures can be tuned over a wide range by using a suitable grafting density and protonation level of the dendrimers. In the seventh chapter, we describe a strategy to assemble dendrimers with the help of sin-gle stranded DNA (ssDNA). We attach an ssDNA to one dendrimer and a complementary ssDNA to a second dendrimer. These two complementary ssDNAs bind with each other through base pair formation to assemble the dendrimers into a single structure. The complementary ssDNAs form a dsDNA which is rigid enough to maintain the inter-dendrimer distance almost the same as the length of the DNA. The inter-dendrimer distance can be tuned by changing the DNA length. However, this method strongly depends on the protonation level of the dendrimers. It works well only for nonprotonated dendrimers. Since the protonated dendrimers are positively charged, they strongly interact with the negatively charged ssDNAs through electrostatic interaction. As a result, ssDNAs wrap the dendrimer surface and hence the inter-dendrimer distance can not be controlled. We have also verified that this method works for multiple nonprotonated dendrimers as well. In the final chapter of this thesis, we summarize the main results and conclude with a brief discussion of future directions of research on the problems considered in the thesis.

Study of biosensors has become an essential part of research in biotechnology. Biosensors as fast, portable, highly sensitive, and low-cost bioanalytical detection devices have been utilized in many fields of human activity. The first part of the presented work focuses on electrochemical biosensors for rapid environmental screening of herbicides as water pollutants. A sol-gel immobilization method for a photosystem II (PSII) complex is studied in order to enhance the sensitivity and the signal strength and stability of a PSII-based biosensor. Computer simulations of a PSII biosensor are employed with the aim to find out how the immobilization membrane properties influence the biosensor parameters. Newly developed immobilization by a thin-layer membrane based on the results of computer simulations and revised measurement protocols are presented. The second part of the work is devoted to synthesis and electrochemical detection of newly developed metal labels for electrochemical immunosensors. The synthesis of dendrimer-encapsulated silver nanoparticles and biorecognition properties of biotin-nanocomposite conjugates are discussed. For detection of synthesized labels, a microfluidic detector was manufactured and tested and different approaches to packing of a microfluidic chip employing polydimethylsiloxane (PDMS) were investigated. Newly designed microstructures for a microfluidic separator of magnetic beads (MBs) were studied by computer simulations. The separator was made and trapping of MBs for the further employment in MBs-based immunoassays are presented

Use of metal based anticancer medication began with the clinical approval of cisplatin in 1978. Research led to the development of six platinum based drug candidates which are in use around the world. However there is a great need to develop better treatment strategies. The present work entitled “Cytotoxicity of Metal Based Anticancer Active Complexes and Their Targeted Delivery Using Nanoparticles” is an effort to prepare cytotoxic metal complexes based on platinum(IV) and copper(II) and deliver them selectively to cancer cells using a targeting ligand, biotin, with two different delivery vehicles, viz. PEGylated polyamidoamine dendrimer (PAMAM) and gold nanoparticles (AuNPs). Chapter 1 provides a brief introduction to cancer and its characteristic features, followed by a short description about different treatment modalities in clinical practice. An account of the development of anticancer drugs starting from purely organic drugs to the field of metal based anticancer drugs is discussed. An overview of the available targeting strategies are discussed with specific examples. The section ends with the scope of the present work. Platinum based anticancer drugs currently in use contain platinum in the +2 oxidation state. These drugs showed side effects and are often ineffective against resistant cells, especially in the latter stages of treatment. A recent focus of metal based anticancer drug research is the development of platinum(IV) systems which shows promise to have greater activity in cancer cells in a reducing environment. Reported platinum(IV) dual drugs contain the components of “cisplatin” or an analogue along with an active organic drug. But there are no known dual drugs based on platinum(IV) that would generate a cytotoxic metal complex along with cisplatin. In Chapter 2, a bimetallic dual drug (M4) (Figure 1), the first of its kind, with components of cisplatin and copper bis(thiosemicarbazone) has been prepared (Figure 1). The components and the bimetallic complex were characterized using several spectroscopic techniques. The dual drug M4 was found to be highly cytotoxic (IC50 1.3 M) against HeLa cells and was better than cisplatin (IC50 6.8 M). The bimetallic complex turned out to be better than the mixture (IC50 7.2 M) of individual drugs which indicated possible synergism of the released cisplatin and the copper bis(thiosemicarbazone) from the dual drug. Figure 1: Structure of the platinum(IV) and copper bis(thiosemicarbazone) complexes. A novel approach towards conjugation of platinum(IV) drugs to a carrier has been developed using a malonate moiety (Figure 2). The bis(butyric acid) complex, Pt(NH3)2(OCOC3H7)2Cl2 (M1), was taken as model complex to demonstrate the conjugation strategy. The complex M4 was also conjugated to the partially PEGylated 5th generation PAMAM dendrimers. Figure 2: Schematic representation of the platinum(IV) drug conjugated PAMAM dendrimer. The cytotoxicity of M4 was reduced to a small extent on conjugation to the dendrimer. In the presence of 5 mM sodium ascorbate as a reducing agent, sustained release (40 %) of the drug was shown to occur over a period of 48 h by the drug release study. The reduction in cytotoxicity of the dendrimer conjugates could be due to incomplete release of the active drug. Unfortunately, no enhanced activity was observed with the additional targeting ligand, biotin. The drug uptake study revealed that the dendrimer conjugates were successful in entering cancer cells. There was no preferential uptake with biotin conjugated dendrimers which explained the similar cytotoxicity of dendrimer conjugates with and without biotin. Different delivery vehicles showed varied efficiency in delivering the pay load (drugs) to the cancer site. In this connection, PEGylated gold nanoparticles have shown good promise as a drug delivery vehicle. In Chapter 3, M1 and M4 are both conjugated to malonate functionalized PEGylated gold nanoparticles (30 nm). Biotin was also attached to the AuNPs for targeting HeLa cells. Figure 3: Schematic representation of the platinum(IV) drug and biotin conjugated AuNPs. The AuNPs were highly stable in water without agglomeration. There was no shift in the Surface Plasmon Resonance (SPR) band after conjugation of the drug molecules and targeting ligands. TEM images and DLS measurements showed there was no change in particle size. Drug conjugated AuNPs were also very stable in high salt concentrations as well as over a large range of pH. AuNPs with M1 were found to be less cytotoxic than the parent drug. Biotinylated AuNPs with M1 were more potent than non-biotinylated nanoparticles and increased cytotoxicity (35 %) was observed with biotin conjugation. Surprisingly, the enhanced activity of biotinylated AuNPs could not be correlated to the drug uptake study. The cytotoxicity of the bimetallic dual drug containing AuNPs were about 10-fold less and no increased activity was observed with the biotinylated conjugates. The reduced activity of AuNPs with the bimetallic drug was due to incomplete release from the AuNPs (20 % release after 48 h). But the release kinetics was very slow and sustained which might increase in vivo activity. The unexpected lower activity of biotinylated conjugates with copper bis(thiosemicarbazone) was suggestive of interference between bis(thiosemicarbazone) complex and the biotin receptor resulting in reduced drug uptake. Copper bis(thiosemicarbazone) complexes hold very good promise as a class of non-platinum anticancer drug candidates. However, they lack selectivity towards malignant cells. Recently, CuATSM has shown hypoxia selectivity and very good cytotoxicity resulting in 64CuATSM being used in advanced stages of clinical trials for imaging hypoxic cells. In Chapter 4, a copper bis(thiosemicarbazone) complex analogous to Cu(ATSM) with a redox active cleavable disulfide linker and a terminal carboxylic acid group (CuATSM-SS-COOH) was synthesised and characterised spectroscopically. The complex was highly cytotoxic and has an IC50 value (6.9 M) similar to that of cisplatin against HeLa cells. The complex was conjugated to PEGylated gold nanoparticles by amide coupling between the acid group from the drug molecule and the amine on the AuNPs (20 nm) for smart drug delivery. The gold nanoparticles were decorated with biotin for targeted delivery to the HeLa cells. Figure 4: Schematic representation of the CuATSM-SS-COOH and biotin decorated AuNPs. The CuATSM-SS-COOH was insoluble in water but conjugation to PEGylated gold nanoparticles made it water soluble. The drug molecules and biotin conjugated AuNPs were highly stable which was confirmed by TEM and DLS measurements. Similar to the study described in the previous chapter, these AuNPs were also stable in a wide range of pH and salt concentrations. In vitro glutathione (GSH) triggered release study demonstrated substantial release of the cytotoxic agent from the AuNPs (60 %) over a period of 48 h. In vitro cell viability study with HeLa cells showed reduced cytotoxicity (IC50 15 M) of AuNPs with and without biotin containing drug conjugates relative to the parent copper complex (IC50 6.9 M). The reduction of the cytotoxicity correlated well with the released amount of the active drug from the nanoconjugates over the same time period. In vivo studies demonstrated the effectiveness of these nanoparticle carriers as suitable vehicles as they exhibited nearly four-fold reduction of tumor volume without significant loss in body weight. Moreover, the biotin targeted nanoparticle showed significant (p < 0.5) reduction in tumor volume compared to the non-targeted gold nanoparticles. Thus, this smart linking strategy Can be extended to other cytotoxic complexes that suffer from non-specificity, low aqueous solubility and toxicity. Multinuclear anticancer active complexes do not act in the same way as that of their corresponding mononuclear analogues. In the case of multinuclear platinum complexes, the activity not only depends on the active moiety but also on the spacer length between the moieties. In Chapter 5, a series of multinuclear copper bis(thiosemicarbazone) complexes were prepared and characterised using different techniques. Figure 5: General structures of binuclear copper bis(thiosemicarbazone) complexes. All the complexes showed redox activity and have a very high negative reduction potential, i.e. these compounds would not be easily reduced in the biological medium and would remain as copper(II) species. As the concentration of the reducing agents are more within cancer cells, once these complexes are inside cells they would be reduced to Cu(I). These compounds were shown to be highly lipophilic from the large log P values. Unfortunately, these binuclear complexes were less active than similar mononuclear complexes. One possible reason for the reduced cytotoxicity of these complexes could be adherence of the complexes to the cell membrane due to the high lipophilicity of these complexes. Out of five different methylene spacers between two bis(thiosemicrarbazone) moieties, the complex with a three carbon spacer was shown to be the most active against HeLa cells. The complexes with five and six methylene spacers turn out to be noncytotoxic. Further experiments are necessary to reveal the mechanism of action in these complexes. In summary, bimetallic complexes can be very active and may be a way of overcoming drug resistance in platinum based therapy. A dual drug can be delivered using a malonate moiety and a disulfide linker. Gold nanoparticles are good delivery vehicles for these dual drugs and show great potential for improvement and translation to the next stage. (For figures pl refer the abstract pdf file)