Many regional and local factors can influence the distribution of native and exotic species in ecological communities. I examined the regional- and local-scale determinants of native and exotic vascular plant species richness and composition in a highly fragmented oak savanna ecosystem on southeastern Vancouver Island. In sharp contrast to most reported results, I found a negative relationship between native and exotic richness at the regional scale, and no relationship at the local scale. Two extrinsic factors, surrounding road density and climate, best explained the regional-scale relationship by each affecting natives and exotics in opposite ways. Road density and climate were also the dominant predictors of native and exotic composition at the regional scale. Patterns in the patch occupancy of individual species confirmed the importance of these factors but I found that low surrounding road densities and cool, wet conditions predicted the presence of many natives and the absence of many exotics. Environmental factors explained variation in richness and composition at the local scale, but these factors were different for natives and exotics. My results suggest that natives and exotics respond to roads and climate in fundamentally different ways. Roads increase both exotic propagule pressure and disturbance, which may facilitate exotic invasion. In contrast, disturbance from roads may increase the likelihood of local extinction for particular natives. Differing climatic preferences within the native and exotic species pools may also partially explain the observed patterns. There was no evidence that native diversity directly affects exotic diversity (or vice versa). Surprisingly, I found that connectivity was not an important predictor of richness or composition despite the high degree of habitat fragmentation in this ecosystem.

Many regional and local factors can influence the distribution of native and exotic species in ecological communities. I examined the regional- and local-scale determinants of native and exotic vascular plant species richness and composition in a highly fragmented oak savanna ecosystem on southeastern Vancouver Island. In sharp contrast to most reported results, I found a negative relationship between native and exotic richness at the regional scale, and no relationship at the local scale. Two extrinsic factors, surrounding road density and climate, best explained the regional-scale relationship by each affecting natives and exotics in opposite ways. Road density and climate were also the dominant predictors of native and exotic composition at the regional scale. Patterns in the patch occupancy of individual species confirmed the importance of these factors but I found that low surrounding road densities and cool, wet conditions predicted the presence of many natives and the absence of many exotics. Environmental factors explained variation in richness and composition at the local scale, but these factors were different for natives and exotics. My results suggest that natives and exotics respond to roads and climate in fundamentally different ways. Roads increase both exotic propagule pressure and disturbance, which may facilitate exotic invasion. In contrast, disturbance from roads may increase the likelihood of local extinction for particular natives. Differing climatic preferences within the native and exotic species pools may also partially explain the observed patterns. There was no evidence that native diversity directly affects exotic diversity (or vice versa). Surprisingly, I found that connectivity was not an important predictor of richness or composition despite the high degree of habitat fragmentation in this ecosystem.

Due to mining activities, the natural vegetation cover in Gatumba area was removed and replaced either by crops or bare wasteland with reduced available arable land. The main aim of the study was to assess the impact of the mining activities on the plant mineral uptake and the dynamics of the vegetation. The vegetation in this area under investigation was diversified and heterogeneous. Trace element concentrations in soils were similar to those in plant parts but some elements were highly concentrated in soils than in plants. According to the bioaccumulation factors of the analyzed trace elements in plant parts, two categories of plants were identified, and these are excluders and accumulators. No toxic levels of the evaluated trace elements were found in the analyzed plant samples. As a recommendation for the adaptation of plants to Gatumba mining environment, the most useful plant species for the revegetation/restitution of the technosols should be Sesbania sesban, Crotalaria dewildemaniana and Tithonia diversifolia subject to further experiments on trace elements bioaccumulation and organic matter production / Environmental Sciences / M.A. Science (Environmental Sciences)

La végétation herbacée est un bon indicateur des conditions environnementales, et elle a pour cela été utilisée pour la mise en évidence des changements environnementaux causés par les actions humaines, tels qu'eutrophisation, dépôts atmosphériques acides, changements de l’usage des sols ou de la pression d'herbivorie. Depuis peu, on s’intéresse à la réponse de la végétation aux changements climatiques. Le choix des zones d'étude se porte naturellement sur la montagne, où le gradient thermique induit par le relief y est fort (-0,56°C pour 100 mètres d'altitude), et où l'urbanisation et la pression agricole sont moindres par rapport aux zones de plaine, favorisant ainsi une réponse migratoire des espèces précoce et non biaisée. Afin de s'affranchir des effets potentiels des changements d'usage du sol, une partie de cette thèse est consacrée aux milieux forestiers dans lesquels l'effet du pastoralisme est réduit. Par ailleurs, une méthode basée sur la modélisation des changements de la réponse de la végétation au gradient d'altitude est développée, permettant ainsi d'étendre l'utilisation de données anciennes à des séries de relevés non géolocalisés. En s'appuyant sur cette méthode, deux caractéristiques de la végétation ont été analysées : la position de l'optimum d'espèces prises individuellement d'une part, et les changements de la valeur indicatrice des communautés végétales d'autre part. Par ailleurs, on a étudié les déplacements à long terme de la limite inférieure des espèces, pour tester la réponse des espèces en limite inférieure de leur distribution. Enfin, on a étudié l'évolution de la flore d'une zone très localisée, protégée par une large barrière physique constituée de deux glaciers permettant de s'affranchir des effets potentiels d'autres perturbations anthropiques concomitantes. Chacun des cas étudiés montre une remontée des espèces en altitude. Cependant, d'autres phénomènes expliquant la réponse de la végétation sont clairement mis en cause : fermeture et maturation du couvert forestier, eutrophisation importante, probable fragmentation de l'habitat ou dispersion par les randonneurs. Ces perturbations anthropiques directes jouent à des échelles de temps et d'espace comparables à l'effet anthropique indirect du changement climatique. Il est donc primordial de les prendre en compte dans les changements de végétation observés, avant de conclure à un effet du réchauffement climatique seul / Herbaceous vegetation is a good bio-indicator of environmental conditions, and was often used to detect and to put in evidence environmental changes caused by anthropogenic activities, like eutrophication, acid atmospheric deposit, land-use change and herbivory pressure. More recently, the interest had focused on the response of vegetation to climatic change. Mountains were naturally chosen as study areas, since the thermal gradient induced by the relief is strong (-0.56°C for 100m a.s.l.) and urbanisation and agricultural pressure are weaker than in lowlands, thus promoting early and unbiased migratory response of species. To free oneself from potential effects of land use change, a part of this PhD is devoted to mountain forest habitat, where pastoralism effects are reduced. Moreover, a method is developed, based on the modelling of changes in vegetation response to elevation gradient, allowing extending the use of historical data to non-geolocalized dataset. With this method, two characteristics of vegetation were analysed: the optimum position of individual species on the one hand, and changes in the indicator value of plant communities on the other. Furthermore, the long-term shift of species’ lower limit is studied, to test the species response at their lower limit. The last part focuses on changes in the flora of a really localised area, protected by a broad physical barrier formed by two glaciers, allowing to free from potential effects of other parallel anthropogenic disturbances. Every studied case shows a shift of species toward higher elevations. However, other phenomena explaining vegetation response became also evident in our study: forest closure and maturation, important eutrophication, probable habitat fragmentation and dispersal by hikers. Those direct anthropogenic disturbances play a role comparable in space and time to the indirect anthropogenic impact of climate change. Thus, it is essential to consider them in the observation of vegetation changes, before assigning the effects to climate warming only

Many regional and local factors can influence the distribution of native and exotic species in ecological communities. I examined the regional- and local-scale determinants of native and exotic vascular plant species richness and composition in a highly fragmented oak savanna ecosystem on southeastern Vancouver Island. In sharp contrast to most reported results, I found a negative relationship between native and exotic richness at the regional scale, and no relationship at the local scale. Two extrinsic factors, surrounding road density and climate, best explained the regional-scale relationship by each affecting natives and exotics in opposite ways. Road density and climate were also the dominant predictors of native and exotic composition at the regional scale. Patterns in the patch occupancy of individual species confirmed the importance of these factors but I found that low surrounding road densities and cool, wet conditions predicted the presence of many natives and the absence of many exotics. Environmental factors explained variation in richness and composition at the local scale, but these factors were different for natives and exotics. My results suggest that natives and exotics respond to roads and climate in fundamentally different ways. Roads increase both exotic propagule pressure and disturbance, which may facilitate exotic invasion. In contrast, disturbance from roads may increase the likelihood of local extinction for particular natives. Differing climatic preferences within the native and exotic species pools may also partially explain the observed patterns. There was no evidence that native diversity directly affects exotic diversity (or vice versa). Surprisingly, I found that connectivity was not an important predictor of richness or composition despite the high degree of habitat fragmentation in this ecosystem. / Science, Faculty of / Botany, Department of / Graduate

No description available.

Orientador: Alessandra Tomaselli Fidelis / Resumo: O Cerrado é formado por fisionomias campestres e savânicas, evoluiu na presença do fogo e depende dele para manter suas fisionomias e biodiversidade. O regime de fogo influencia diretamente na montagem da comunidade vegetal, na regeneração e nas habilidades competitivas das plantas. A frequência é um dos fatores do regime de fogo e alterações nela podem ser prejudiciais até mesmo para plantas e comunidades adaptadas ao fogo. Portanto, este estudo busca compreender os efeitos de diferentes frequências de fogo em comunidades de campo sujo de Cerrado. Para isso, foram realizados levantamentos da vegetação e coleta de biomassa em áreas com diferentes históricos de fogo (excluído do fogo, queimadas anualmente e bienalmente), o que forneceu os dados de composição e produtividade da comunidade. Os levantamentos, incluindo a cobertura (%) por espécie, foram realizados em 10 subparcelas de 1x1m por tratamento (10 subparcelas/tratamento,3 tratamentos, 4 parcelas/tratamento). Avaliamos também através da taxa de propagação (m.s-1), eficiência de queima (%) e intensidade (kW.m-1) entre outros parâmetros do fogo, os efeitos de diferentes frequências no comportamento do fogo. Nossos resultados mostraram que a riqueza de espécies das comunidades vegetais foi maior nas áreas com frequência anual de fogo do que nas excluídas, 6 meses após o fogo e maior para as bienais do que as excluídas 12 meses após o fogo. O índice de diversidade foi maior no tratamento anual de queima antes e 12 meses apó... (Resumo completo, clicar acesso eletrônico abaixo) / Abstract: The Cerrado is formed by grasslands and savannah physiognomies, evolved in the presence of fire and depends on it to maintain its physiognomies and biodiversity. The fire regime influences the plant community assembly, the regeneration and the competitive abilities of the plants. Frequency is one of the factors of the fire regime and changes in it can be detrimental even to fire-adapted plants and communities. Therefore, this study aimed to understand the effects of different fire frequencies in campo sujo of Cerrado communities. For this, vegetation surveys and biomass collection were carried out in areas with different fire histories (excluded from fire, burned annually and biennially), which provided community composition and productivity data. Surveys, including coverage (%) by species, were performed on 10 1x1m subplots per treatment (10 subplots / treatment, 3 treatments, 4 plots / treatment). We also evaluated through propagation rate (m.s-1), firing efficiency (%) and intensity (kW.m-1) among other fire parameters, the effects of different frequencies on fire behavior. Our results showed that species richness of plant communities was higher in areas with annual fire frequency than in excluded areas 6 months after fire and higher for biennials than those excluded 12 months after fire. The diversity index was higher in the annual burn treatment before and 12 months after the burns. Regarding the number of species per functional group, only the forbs presented increase a... (Complete abstract click electronic access below) / Mestre

Les prairies de montagne offrent de nombreux services ecosystémiques qui sont menacés par le changement global. Les traits fonctionnels constituent un outil prometteur pour caractériser les réponses des communautés à des changements de conditions environnementales et leurs répercussions sur les services associés. Cependant, des résulats de plus en plus nombreuses soulignent l’importance de la variabilité intra-spécifique des traits a également été mise en évidence. Pour étudier ces effets, je propose un nouveau modèle à base d’agents, MountGrass, qui combine la modélisation de communautés végétales riches en espèces avec des processus de plasticité phénotypique. Ces deux éléments au coeur du modèle sont associés grâce à des compromis d’allocation basés sur des patrons empiriques établis de stratégies d’utilisation des resources.Avec MountGrass, j’ai exploré l’impact de la plasticité phénotypique sur la croissance individuelle et les propriétés principales des communautés prairiales. À l’échelle individuelle, le modèle paramétré a révélé un fort impact positif de la plasticité phénotypique sur la croissance mais aussi sur la niche fondamentaledes espèces. Des phénomènes de convergence et de réduction de la sensibilité aux variations de conditionsexpliquent ces effets. À l’échelle des communautés, les simulations ont confirmé de forts effets de la plasticité sur la structure des communautés et leur diversité spécifique. Ces effets sont expliqués par l’effet combiné de la réduction du filtre abiotique et de la réduction des différences de compétitivité. Cependant, aucun effet majeur sur la stratégie dominante ou la productivité n’a pu être mis en évidence.Des implémentations alternatives ou des extensions du modèle devraient permettre de tester la robustesse des résultats obtenus et d’analyser d’autres schémas de dynamiques des communautés. En conclusion, ce travail ouvre la voie à une meilleure considération et une meilleure compréhension du rôle des variabilités intra-spécifiques dans les dynamiques des communautés végétales. / Mountain grasslands provide numerous ecosystem services that are likely to be impacted by global change. Plant functional traits hold great promise to succinctly characterise plant community response to changing environmental conditions and its effect on associated services; with growing evidence of the importance of intra-specific trait variability. I propose here a novel agent-based model, MountGrass, that combines the modelling of species rich grassland communities with phenotypic plasticity. These two key components are integrated via allocation trade-offs based on established empirical patterns of strategic differentiation in resource-use.With MountGrass, I explored the impact of phenotypic plasticity on individual plant growth and on main properties of grassland communities. At the individual level, the parametrised model revealed a strong impact of plasticity on growth and species’ fundamental niches, with potentially large impacts on community properties. These effects are explained by the convergence of species’ strategies and the reduction of the sensitivity to variable conditions. At the community level, simulations confirmed the strong effect of plastic allocation on community structure and species richness. These effects are driven by the cumulative effect of a reduction of both abiotic filtering and fitness differences between species. However, no clear effect on the dominant strategy or productivity could be detected.Going further, the robustness of these findings and other patterns of community dynamics should be analysed with alternative or extended implementations of MountGrass. In sum, this work opens a door towards a better integration and understanding of the role of the intra-specific variability in complex plant community dynamics.

Nutrients are usually patchily distributed in natural soils. Plants are often able to respond to nutrient heterogeneity in artificial conditions by active plastic changes of root system morphology. The occurrence or magnitude of a foraging response can be altered by the presence of competition. However, it is unclear to what extent root foraging takes place in the field. I conducted a field experiment in order to determine the effect of an artificial nutrient patch on fine belowground biomass of (a) an established community and (b) model plants. The study array consisted of a grid of 30×30 cm plots with model plants located in the centre. Half of the plots contained the artificial patch located 5.5 cm from the model plant. Fertilizer patch treatment did not increase mean plot fine underground biomass. Instead, fine underground biomass was higher in places of greater soil moisture estimated from mean plot EIVs. Neither total model plant root biomass nor proportion of roots in the enriched quarter increased in the fertilizer treatment. Competition was probably higher in fertilized than in control plots judging by a 2-fold increase in death rate of model plants. However, greater proportion of model plants flowered in the treatment plots. Possible causes include a plastic response to the patch as well...

La restauration écologique a été identifiée comme une approche permettant notamment de ralentir la perte de biodiversité et de maintenir tous les biens et services issus de cette biodiversité desquels dépend le bien être de notre civilisation actuelle. Cette restauration des écosystèmes se base sur des connaissances provenant à la fois de l'écologie des communautés et de l’écologie de la restauration. Les objectifs de la thèse sont donc de comprendre la dynamique d’une steppe méditerranéenne après changements d’usage ainsi que la mise en oeuvre de techniques qui pourraient être appliquées à la restauration de cet écosystème après une perturbation anthropique sévère. La thèse a pour objet d'étude la steppe méditerranéenne de la plaine de Crau, et notamment d’anciennes cultures pour étudier la recolonisation spontanée après perturbation et le projet de réhabilitation à grande échelle de Cossure pour les expérimentations sur les techniques de restauration. En ce qui concerne la dynamique après une perturbation anthropique exogène sévère, nous avons confirmé la faible résilience de la communauté végétale steppique à la fois à moyen (30-40 ans) et long terme (150 ans), tandis que les paramètres du sol et le taux d'infestation des mycorhizes sont résilients sur le long terme. En outre, nous avons confirmé le rôle joué par les trois filtres dans la recolonisation des communautés végétales. En ce qui concerne la steppe de la Crau, la recolonisation est déterminée en premier par le filtre abiotique, puis par le filtre de dispersion et enfin par le filtre biotique. Compte tenu de la faible résilience de la communauté, nous avons testé plusieurs techniques de restauration appliquées à grande échelle au sein du projet de réhabilitation de Cossure: le semis d’espèces nurses, l'étrépage de sol, le transfert de foin et le transfert de sol. Afin d'évaluer l'efficacité des techniques de restauration, nous avons développé des indices pour mesurer « l 'intégrité » de la structure de la communauté permettant de distinguer les abondances inférieures des abondances supérieures par rapport à la communauté de référence. Les meilleurs résultats ont été obtenus avec le transfert du sol, suivi par l’étrépage de sol, puis le semis d’espèces nurses et enfin le transfert de foin. Ces résultats ont toutefois confirmé la difficulté de restaurer totalement la communauté végétale steppique. Les recherches menées au sein de cette thèse montrent que les connaissances actuelles en matière de restauration écologique permettent de restaurer au moins partiellement certaines composantes de cet écosystème, mais suggèrent de mettre un maximum de moyens pour la conservation in situ des habitats naturels plutôt que de devoir les restaurer après qu'ils aient été détruits / Ecosystem restoration has been identified as one approach to slow down the loss of biodiversity and to protect all the biodiversity-based goods and services from which humankind benefits. Restoration feeds from knowledge coming from both community ecology and restoration ecology. The objectives of the thesis are to provide insights on both the dynamics of a mediterranean steppe after changes in land-use and the implementation of techniques which could be applied to restore this ecosystem after severe anthropogenic disturbances. The thesis takes as a study object the La Crau Mediterranean steppe, and especially former cultivated fields to study the recovery after cultivation and the Cossure large scale rehabilitation project to experiment rehabilitation and restoration techniques. Concerning dynamics after severe exogenous anthropogenic disturbances, we confirmed the low resilience of the steppe plant community both at mid- (30-40 years) and long-term (150 years) while the resilience of soil parameters and mycorrhizal infestation rate are effective on the long-term. Moreover we confirmed the role played by the three filters in the plant community recovery and found that for the La Crau steppe, this is firstly driven by the abiotic filter, then by the dispersion filter and finally by the biotic filter. Given this low resilience, we tested several restoration techniques applied at large-scale within the Cossure rehabilitation project: nurse species seeding, topsoil removal, hay transfer and soil transfer. In order to assess the efficiency of restoration techniques we developed indices to measure the community structure integrity, disentangling lower and higher abundances compared to the reference. The best results were obtained with soil transfer, followed by topsoil removal, then nurse species seeding and finally hay transfer. The research conducted for this thesis shows that current knowledge in ecological restoration makes it possible to restore at least partially some La Crau ecosystem components, but ought to lead us to understand the importance of in situ conservation of natural habitats as a better alternative to restore them after they were destroyed