A descoberta de novos alvos terapêuticos capazes de reverter o efeito tumoral imunossupressor sobre as células dendríticas (DCs) é de grande relevância clínica. Identificamos que monócitos de pacientes com leucemia linfóide crônica (LLC) têm alterações na sinalização de STAT6 induzida por IL-4 que previne a maturação fenotípico-funcional das DCs. Embora os monócitos dos pacientes apresentem alta expressão de IL-4R, a atividade de STAT6 está inibida devido aos elevados níveis de SOCS5. IL-10 reproduz esta desregulação de STAT6/SOCS5 nos monócitos de doadores saudáveis, causando diferenciação defeituosa das DCs. Isso indica que SOCS5 está envolvida nas alterações das DCs de pacientes. Ainda, encontramos que a inibição de STAT3 com pirimetamina, um composto em ensaio clínico para LLC, não afeta a maturação das DCs, diferentemente da inibição de STAT5 por JQ1. Isso mostra que STAT5 é importante para a maturação das DCs, e sugere que a JQ1, mas não a pirimetamina, pode causar imunossupressão. Já SOCS5 pode ser um novo potencial alvo para terapia do câncer. / Discovery of new targets to reverse tumor immunosuppression on dendritic cells (DCs) hold great therapeutic promise. Here, we identify that monocytes from chronic lymphocytic leukemia (CLL) patients have alteration in IL-4-induced STAT6 signaling that prevents DCs phenotypic and functional maturation. Although patients monocytes display high IL-4R expression, STAT6 activity is inhibited because of elevated SOCS5 levels. IL-10-treatment of healthy donors monocytes reproduces this altered mechanism (STAT6/SOCS5) and leads to a defective DC differentiation. These findings indicate that a high SOCS5 level is involved on CLL-DCs impaired function. Moreover, we find that pharmacologic inhibition of STAT3 by pyrimethamine, a clinical trial compound for CLL, does not affect LPS-induced DCs maturation while STAT5 inhibition by JQ1 prevents it. Our findings show that STAT5 is important for DCs maturation, and suggest that JQ1, but not pyrimetamine, can cause immunosuppression. Additionally, SOCS5 emerges as a new potential target for cancer treatment.

A descoberta de novos alvos terapêuticos capazes de reverter o efeito tumoral imunossupressor sobre as células dendríticas (DCs) é de grande relevância clínica. Identificamos que monócitos de pacientes com leucemia linfóide crônica (LLC) têm alterações na sinalização de STAT6 induzida por IL-4 que previne a maturação fenotípico-funcional das DCs. Embora os monócitos dos pacientes apresentem alta expressão de IL-4R, a atividade de STAT6 está inibida devido aos elevados níveis de SOCS5. IL-10 reproduz esta desregulação de STAT6/SOCS5 nos monócitos de doadores saudáveis, causando diferenciação defeituosa das DCs. Isso indica que SOCS5 está envolvida nas alterações das DCs de pacientes. Ainda, encontramos que a inibição de STAT3 com pirimetamina, um composto em ensaio clínico para LLC, não afeta a maturação das DCs, diferentemente da inibição de STAT5 por JQ1. Isso mostra que STAT5 é importante para a maturação das DCs, e sugere que a JQ1, mas não a pirimetamina, pode causar imunossupressão. Já SOCS5 pode ser um novo potencial alvo para terapia do câncer. / Discovery of new targets to reverse tumor immunosuppression on dendritic cells (DCs) hold great therapeutic promise. Here, we identify that monocytes from chronic lymphocytic leukemia (CLL) patients have alteration in IL-4-induced STAT6 signaling that prevents DCs phenotypic and functional maturation. Although patients monocytes display high IL-4R expression, STAT6 activity is inhibited because of elevated SOCS5 levels. IL-10-treatment of healthy donors monocytes reproduces this altered mechanism (STAT6/SOCS5) and leads to a defective DC differentiation. These findings indicate that a high SOCS5 level is involved on CLL-DCs impaired function. Moreover, we find that pharmacologic inhibition of STAT3 by pyrimethamine, a clinical trial compound for CLL, does not affect LPS-induced DCs maturation while STAT5 inhibition by JQ1 prevents it. Our findings show that STAT5 is important for DCs maturation, and suggest that JQ1, but not pyrimetamine, can cause immunosuppression. Additionally, SOCS5 emerges as a new potential target for cancer treatment.

Les cytokines jouent un rôle fondamental dans la régulation des processus biologiques via la cascade de signalisation JAK-STAT. Les « Suppressors of Cytokine Signalling » (SOCS), protéines intracellulaires, inhibent la voie JAK-STAT. Plusieurs études supportent leur implication dans des maladies immunitaires, mais peu d’informations sont disponibles sur leur expression par les lymphocytes T humains. Nous postulons que les cytokines Interféron-β(IFN-β) et Interleukine-27 (IL-27), dotées d’un potentiel immuno-régulateur, ont des rôles bénéfiques via l’induction des SOCS. L’impact de l’IFN-β et l’IL-27 sur l’expression des SOCS-1 et SOCS-3 par des cellules T CD8 et CD4 humaines a été étudié en utilisant des cellules sanguines de donneurs sains. L’expression de ces régulateurs a été évaluée aux niveaux de l’ARNm par qRT-PCR et protéique par immunocytochimie. Les SOCS-1 et SOCS-3 ont été rapidement induits en ARNm dans les deux types cellulaires en réponse à l’IFN-β ou l’IL-27 et une augmentation de l’expression a été confirmée au niveau protéique. Afin de mimer les thérapies à base d’IFN-β, les cellules T ont été exposées chroniquement à l’IFN-β. Après chaque ajout de cytokine les cellules T ont augmenté l’expression du SOCS-1, sans moduler le SOCS-3. L’IL-27 a induit les SOCS-1 et SOCS-3 préférentiellement dans les cellules T CD8 ; ceci corrèle avec des résultats du laboratoire démontrant une plus petite expression des récepteurs à l’IL-27 par les lymphocytes T CD4 que les CD8. Notre projet a permis d’élucider l’expression des SOCS dans deux populations de cellules T et de clarifier les mécanismes d’actions de l’IFN-β et l’IL-27. / Cytokines regulate fundamental biological processes via the JAK-STAT signaling pathway. Suppressors of Cytokine Signaling proteins (SOCS), intracellular proteins, inhibit the JAK-STAT pathway. Emerging evidence supports the involvement of SOCS in diseases of the immune system but no data is available regarding their expression in human T cells. We postulate that the cytokines Interferon-β (IFN-β) and Interleukin-27 (IL-27), both potential immuno-regulators, have beneficial roles through the induction of SOCS proteins. The impact of IFN-β and IL-27 on the SOCS-1 and SOCS-3 expression by human CD4 and CD8 T cells was assessed using peripheral blood mononuclear cells from healthy donors. We evaluated the expression of SOCS-1 and SOCS-3 at the mRNA level by qRTPCR and at the protein level by immunocytochemistry. A rapid increase of SOCS-1 and SOCS-3 mRNA levels was observed upon cytokine addition, and such upregulation was confirmed at the protein level. To mimic patients under IFN-β treatment, both T cell subsets were chronically exposed to IFN-β. We observed an increase of SOCS-1 after each stimulation but not for SOCS-3. IL-27 stimulation increased SOCS-1 and SOCS-3 mRNA levels in CD8 T cells but only slightly in CD4 T cells; these observations correlate with previous observations in our laboratory showing less IL-27 receptors on CD4 T cells than CD8 counterparts. Our project determined the distinct expression of SOCS proteins in different human T cells subsets. This study could highlight the mechanism of action of cytokines such as IFN-β and IL-27.

Les cytokines jouent un rôle fondamental dans la régulation des processus biologiques via la cascade de signalisation JAK-STAT. Les « Suppressors of Cytokine Signalling » (SOCS), protéines intracellulaires, inhibent la voie JAK-STAT. Plusieurs études supportent leur implication dans des maladies immunitaires, mais peu d’informations sont disponibles sur leur expression par les lymphocytes T humains. Nous postulons que les cytokines Interféron-β(IFN-β) et Interleukine-27 (IL-27), dotées d’un potentiel immuno-régulateur, ont des rôles bénéfiques via l’induction des SOCS. L’impact de l’IFN-β et l’IL-27 sur l’expression des SOCS-1 et SOCS-3 par des cellules T CD8 et CD4 humaines a été étudié en utilisant des cellules sanguines de donneurs sains. L’expression de ces régulateurs a été évaluée aux niveaux de l’ARNm par qRT-PCR et protéique par immunocytochimie. Les SOCS-1 et SOCS-3 ont été rapidement induits en ARNm dans les deux types cellulaires en réponse à l’IFN-β ou l’IL-27 et une augmentation de l’expression a été confirmée au niveau protéique. Afin de mimer les thérapies à base d’IFN-β, les cellules T ont été exposées chroniquement à l’IFN-β. Après chaque ajout de cytokine les cellules T ont augmenté l’expression du SOCS-1, sans moduler le SOCS-3. L’IL-27 a induit les SOCS-1 et SOCS-3 préférentiellement dans les cellules T CD8 ; ceci corrèle avec des résultats du laboratoire démontrant une plus petite expression des récepteurs à l’IL-27 par les lymphocytes T CD4 que les CD8. Notre projet a permis d’élucider l’expression des SOCS dans deux populations de cellules T et de clarifier les mécanismes d’actions de l’IFN-β et l’IL-27. / Cytokines regulate fundamental biological processes via the JAK-STAT signaling pathway. Suppressors of Cytokine Signaling proteins (SOCS), intracellular proteins, inhibit the JAK-STAT pathway. Emerging evidence supports the involvement of SOCS in diseases of the immune system but no data is available regarding their expression in human T cells. We postulate that the cytokines Interferon-β (IFN-β) and Interleukin-27 (IL-27), both potential immuno-regulators, have beneficial roles through the induction of SOCS proteins. The impact of IFN-β and IL-27 on the SOCS-1 and SOCS-3 expression by human CD4 and CD8 T cells was assessed using peripheral blood mononuclear cells from healthy donors. We evaluated the expression of SOCS-1 and SOCS-3 at the mRNA level by qRTPCR and at the protein level by immunocytochemistry. A rapid increase of SOCS-1 and SOCS-3 mRNA levels was observed upon cytokine addition, and such upregulation was confirmed at the protein level. To mimic patients under IFN-β treatment, both T cell subsets were chronically exposed to IFN-β. We observed an increase of SOCS-1 after each stimulation but not for SOCS-3. IL-27 stimulation increased SOCS-1 and SOCS-3 mRNA levels in CD8 T cells but only slightly in CD4 T cells; these observations correlate with previous observations in our laboratory showing less IL-27 receptors on CD4 T cells than CD8 counterparts. Our project determined the distinct expression of SOCS proteins in different human T cells subsets. This study could highlight the mechanism of action of cytokines such as IFN-β and IL-27.

No description available.

Resultados anteriores do nosso grupo mostraram que a melatonina (MLT) age em monócitos aumentando sua sensibilidade à IL-4 e, consequentemente, levando estas células a se diferenciarem em células dendríticas - quando in vitro e estimulados com IL-4 e GM-CSF (mo-DCs) com um perfil fenotípico e funcional mais ativado. Outros estudos do nosso grupo mostraram que mo-DCs de pacientes portadoras de câncer apresentam desvios funcionais capazes de comprometer a ativação de linfócitos por este tipo celular. Um outro apontamento de nosso grupo foi para o fato de que, muito provavelmente relacionado a estes desvios, está um comprometimento da via IL-4/STAT-6/SOCS-5, que se mostrou alterada em pacientes com leucemia linfóide crônica. Baseado nestes resultados, o presente trabalho objetivou investigar os efeitos da MLT na diferenciação in vitro de mo-DCs de doadoras saudáveis e de pacientes portadoras de câncer de mama, sob a hipótese de que este hormônio poderia agir na via IL-4/STAT-6/SOCS-5 de modo a gerar mo-DCs com fenótipo e função relacionados à maior ativação. Para tanto, monócitos provenientes do sangue periférico de indivíduos saudáveis e de pacientes foram tratados com MLT (2,5 nM 2 horas) e induzidos à diferenciação em mo-DCs; no quinto dia as células foram ativadas com LPS (100 ng/ml 24 horas). As análises, por citometria de fluxo, do fenótipo e das citocinas ao longo da diferenciação de mo-DCs não apontou efeitos consistentes acerca do tratamento com MLT, mas indicou maior expressão de CD83+ nos monócitos das pacientes (p=0,014) e maior concentração da citocina IL-12p70 no sobrenadante das culturas de mo-DCs destes indivíduos, ao final da diferenciação (p=0,02). Para a análise da capacidade linfoestimuladora das mo-DCs foi realizada co-cultura destas células com linfócitos T (LT) alogeneicos (1 DC: 30 LT) por 5 dias. Não houve diferença na indução de proliferação de LT estimulados por mo-DCs de saudáveis nem de pacientes. A MLT mostrou efeito apenas nas co-culturas com células saudáveis aumentando as concentrações de TNF, IFN-γ e IL-2 nos sobrenadantes. Nas co-culturas com células de pacientes sem tratamento, houve maior nível de IL-2 e IL-10, se comparadas com saudáveis. Os monócitos foram também tratados com MLT (2.5 nM) ou IL-4 (50 ng/mL) por 15 minutos, para avaliação da expressão de STAT-6, pSTAT-6 e SOCS-5. Não foi constatado efeito da MLT nesse caso, mas os monócitos de pacientes apresentaram maior expressão de STAT-6, porém menor de pSTAT-6, comparados com saudáveis. Tomados em conjunto, os resultados globais indicam algumas diferenças fenotípicas e funcionais entre monócitos de pacientes e controles, mas não entre suas mo-DCs. Quanto à MLT, os resultados apontam para o fato de que o hormônio gera alterações apenas em células provenientes de indivíduos saudáveis e somente com relação às citocinas encontradas nos sobrenadantes das co-culturas. / Previous studies at our lab have shown that melatonin (MLT) acts on monocytes increasing their sensitivity to Interleukin-4 (IL-4) and, consequently, generating dendritic cells (DCs) when in vitro and treated with IL-4 and GM-CSF (mo-DCs) phenotically and functionally more activated. Other studies from our group have shown that mo-DCs obtained from cancer patients have functional biases capable of compromising the activation of T lymphocytes. Another result from our group pointed to the fact that part of the mo-DCs\' functional bias in cancer patients could be attributed to the decrease in STAT-6 signaling, a pathway that is activated by IL-4 and down regulated by SOCS-5, whose levels, in turn, were found elevated in cancer patients\' monocytes. Based on these results, the present work aimed to investigate the effects of MLT on the in vitro differentiation of healthy donors and breast cancer patients mo-DCs, under the hypothesis that this hormone could act on the IL-4/STAT-6/SOCS-5 axis generating better activated mo-DCs. Peripheral blood monocytes from healthy donors and breast cancer patients were treated with MLT (2,5 nM 2 hours) and induced to differentiate into mo-DCs; on the fifth day cells were activated with LPS (100 ng/ml 24 hours). Flow cytometry analysis of phenotype and cytokines in supernatants during mo-DCs differentiation didnt show MLT effects, but indicated higher frequency of CD83+ (p=0,014) monocytes among mononuclear cells of the patients, when compared with healthy donors. In addition, higher concentration of IL-12p70 was found in mo-DCs cultures (sixth day - p=0,02). The capacity to stimulate allogeneic T lymphocytes was assessed by co-cultures (1DC : 30LT), maintained for 5 days. Results indicate an effect of MLT only in order to increase the TNF, IFN-γ and IL-2 concentrations in supernatants of co-cultures with healthy donors mo-DCs. Patients cells showed differences only when there was no hormone treatment, showing higher levels of IL-10 in the co-culture supernatants, when compared to healthy controls. Monocytes were also treated with MLT (2,5 nM) or IL-4 (50 ng/mL) for 15 minutes to evaluate STAT-6, pSTAT-6 and SOCS-5 expression. Results showed an increase of STAT-6 in patients monocytes and a lower capacity of these cells to phosphorylate this molecule, even when in presence of IL-4. Together, the results point to some phenotypic and functional differences between patients and healthy donors monocytes, but it was not shown in their mo-DCs. Results also point to the fact that MLT generates changes only in healthy donors cells and those effects were only seen with cytokines found in cultures supernatants.

Les constructeurs automobiles proposent de plus en plus des systèmes d'aide à la conduite, en anglais Advanced Driver Assistance Systems (ADAS), utilisant des caméras et des algorithmes de traitement d'images. Pour embarquer des applications ADAS, les fondeurs proposent des architectures embarquées hétérogènes. Ces Systems-on-Chip (SoCs) intègrent sur la même puce plusieurs processeurs de différentes natures. Cependant, avec leur complexité croissante, il devient de plus en plus difficile pour un industriel automobile de choisir un SoC qui puisse exécuter une application ADAS donnée avec le respect des contraintes temps-réel. De plus le caractère hétérogène amène une nouvelle problématique : la répartition des charges de calcul entre les différents processeurs du même SoC.Pour répondre à cette problématique, nous avons défini au cours de cette thèse une méthodologie globale de l’analyse de l'embarquabilité d'algorithmes de traitement d'images pour une exécution temps-réel. Cette méthodologie permet d'estimer l'embarquabilité d'un algorithme de traitement d'images sur plusieurs SoCs hétérogènes en explorant automatiquement les différentes répartitions de charge de calcul possibles. Elle est basée sur trois contributions majeures : la modélisation d'un algorithme et ses contraintes temps-réel, la caractérisation d'un SoC hétérogène et une méthode de prédiction de performances multi-architecture. / Car manufacturers increasingly provide Advanced Driver Assistance Systems (ADAS) based on cameras and image processing algorithms. To embed ADAS applications, semiconductor companies propose heterogeneous architectures. These Systems-on-Chip (SoCs) are composed of several processors with different capabilities on the same chip. However, with the increasing complexity of such systems, it becomes more and more difficult for an automotive actor to chose a SoC which can execute a given ADAS application while meeting real-time constraints. In addition, embedding algorithms on this type of hardware is not trivial: one needs to determine how to spread the computational load between the different processors, in others words the mapping of the computational load.In response to this issue, we defined during this thesis a global methodology to study the embeddability of image processing algorithms for real-time execution. This methodology predicts the embeddability of a given image processing algorithm on several heterogeneous SoCs by automatically exploring the possible mapping. It is based on three major contributions: the modeling of an algorithm and its real-time constraints, the characterization of a heterogeneous SoC, and a performance prediction approach which can address different types of architectures.

A periodontite está relacionada à genética do hospedeiro, constituição do biofilme dental e fatores ambientais como o hábito de fumar. A metilação do DNA é um mecanismo de expressão genética que pode inibir ou silenciar a expressão do gene. Desta forma, vários pesquisadores têm se dedicado a estudar a influência genética sobre a suscetibilidade e/ou risco aumentado à doença periodontal. Estudos têm relatado associação entre vários biomarcadores epigenéticos com a inflamação periodontal. Considerando a hipótese de que existe associação do tabagismo com a metilação em genes relacionados à doença periodontal, o objetivo deste estudo foi verificar o padrão de metilação do DNA em células do epitélio oral de pacientes com periodontite crônica (CP) no promotor de um gene específico envolvido no controle da inflamação, como supressor da sinalização de citocinas (SOCS-1) em pacientes fumantes e não fumantes. O gene SOCS-1 é localizado no cromossomo 16p13.3, compostos por uma região amino-terminal, um domínio SH2 central e uma caixa SOCS. É um regulador negativo da via JAK / STAT. Inibe os efeitos biológicos de várias citocinas, incluindo IL-2, IL-3, IL-4, IL-6, interferão (INF) - γ e INF- α / β. Este foi um estudo caso-controle, comparando dois grupos, um grupo (teste) com consumo de 10 cigarros mínimos por dia, com diagnóstico de periodontite crônica e outro grupo controle que foram pacientes não fumantes com periodontite crônica. Para tal, DNA genômico foi purificado de células epiteliais bucais obtidas por meio de enxágue com sacarose 3%, por tempo único de coleta. O DNA foi modificado pelo bissulfito de Sódio e os padrões de metilação do DNA foram analisados com a técnica MS-PCR (Polymerase chain reaction). A análise estatística foi realizada pela plataforma estatística R version 3.3.2 Core Team (2016). Foi realizado Teste t de Student para amostras independentes e teste não paramétrico de Wilcoxon & Mann-Whitney para variáveis qualitativas; teste qui-quadrado e para a variável metilação, foi feito um teste exato de Fisher para testar a associação entre os grupos e a metilação. Os resultados indicaram que, para células epiteliais da mucosa bucal, a frequência de desmetilação no gene SOCS-1 é maior no grupo sem o hábito do fumo, em comparação ao grupo fumante. Foram detectadas diferenças no padrão de metilação entre os dois grupos. Ao estabelecer uma estimativa de risco relativo entre os grupos e a variável metilação, foi observado que pacientes fumantes têm 7,08 vezes (risco relativo) com um intervalo (1,95-51.46) de apresentar doença periodontal crônica, com um padrão de metilação no gene SOCS-1 / Periodontitis is related to host genetics, constitution of the dental biofilm and environmental factors such as smoking. DNA methylation is a mechanism of genetic expression that can inhibit or silence gene expression. In this way several researchers have been dedicated to study the genetic influence on the susceptibility and / or increased risk to periodontal disease. Studies have reported association between several epigenetic biomarkers with periodontal inflammation. Considering the hypothesis that there is an association between smoking and methylation in genes related to periodontal disease, the objective of this study was to verify the DNA methylation pattern in oral epithelial cells of patients with chronic periodontitis (ChP) in the promoter of a specific gene involved in the control of inflammation, as suppressor of cytokine signaling (SOCS-1) in smokers and nonsmokers patients. The SOCS-1 gene is located on chromosome 16p13.3 composed of an amino-terminal region, a central SH2 domain and a SOCS box. It is a negative regulator of the JAK / STAT path. It inhibits the biological effects of various cytokines, including IL-2, IL-3, IL-4, IL-6, interferon (INF) -γ and INF-α / β . This was an case-control type study, comparing two groups, a group with consumption of 10 minimum cigarettes per day, with a diagnosis of chronic periodontitis and another control group were non-smokers with chronic periodontitis. For this, genomic DNA was purified from oral epithelial cells obtained by rinsing with 3% sucrose, for a single time of collection. The DNA was modified by Sodium bisulfite and the methylation patterns of the DNA were analyzed with the MS-PCR technique (Polymerase chain reaction). Statistical analysis was performed by the statistical platform R version 3.3.2 Core Team (2016), Student\'s t-test was performed for independent samples and Wilcoxon\'s & Mann-Whitney non-parametric test for qualitative variables; chi-square test. For the methylation variable, an exact Fisher\'s test was performed to test the association between the groups and the methylation. The results indicated that, for oral mucosal epithelial cells, the frequency of demethylation in the SOCS-1 gene is higher in the non-smoking group as compared to the smoker group. statistically significant differences were detected in the methylation pattern between the two groups. When establishing an relative risk between the groups and the methylation variable, it was observed that smokers are 7.08 times (relative risk) of having chronic periodontal disease with a methylation pattern in the SOCS-1 gene

L’objectif de ce travail de thèse s’inscrit dans le cadre de l’étude de la réponse immune innée contre le virus influenza porcin (SIV) et de son contrôle dans l’espèce porcine par les protéines suppressors of cytokine signaling (SOCS) et la cytokine-inducible SH2 domain containing protein (CISH). L’analyse de l’expression des ARNm de SOCS à l’homéostasie a montré une expression significative dans le thymus suggérant un rôle dans la différenciation des cellules T. La réponse immune innée contre une souche de SIV de sous-type H3N2 a été analysée in vitro et ex vivo. L’expression de transcrits impliqués dans la réponse antivirale et de SOCS a été évaluée. Une surexpression des ARNm des gènes antiviraux et de SOCS1 a été observée notamment à 24h post-infection. L’infection expérimentale des cellules NPTr par le virus H3N2 induit une activation des voies de signalisation impliquant MAPK et JAK/STAT. L’utilisation d’inhibiteurs spécifiques de la voie JAK/STAT a conduit à une diminution de l’expression des transcrits antiviraux et ceux de SOCS1 ainsi que l’expression des interférons de type I et III. Afin de développer un outil alternatif in vitro d’étude de la réponse immune innée, la culture en interface air-liquide (ALI) des cellules NPTr a été réalisée. Des cellules à mucus, des jonctions serrées et une résistance transépithéliale élevée ont été observées. Cependant, ces cellules n’ont pas développé de cils. La culture des cellules NPTr dans des conditions ALI, a permis une représentation partielle de l’épithélium respiratoire porcin et constitue ainsi une alternative d’étude in vitro. / The aim of this work was to investigate the innate immune response to swine influenza virus (SIV) and its regulation in swine by the suppressors of cytokine signaling SOCS and the cytokine-inducible SH2 domain containing protein (CISH). The assessment of SOCS constitutive mRNA expression showed significant mRNA expression of SOCS1 in thymus suggesting a key role of this protein in T cell differentiation. The innate immune response against an SIV H3N2 subtype was then assessed in vitro and ex vivo by measuring antiviral and SOCS transcripts expression. The induction of several antiviral genes along with SOCS1 gene was observed. Experimental infection of NPTr cells with H3N2 virus induced MAPK and JAK/STAT signaling pathways activation. The inhibition of JAK/STAT pathway clearly reduced antiviral transcript expression, SOCS1 and both interferon types I and III mRNA expression as well. In order to develop an alternative in vitro tool to study the innate immune response, NPTr epithelial cell line were cultured at the air-liquid interface. This system promotes the differentiation of mucus producing cells, tight junctions development and enables high trans-epithelial electronic resistance values. Nonetheless, the NPTr cells do not develop cilia. The culture of NPTr cells in ALI conditions allows a partial in vitro representation to investigate some aspects of host/respiratory pathogen interaction in pigs.

Made available in DSpace on 2015-05-14T12:36:32Z (GMT). No. of bitstreams: 1 arquivototal.pdf: 10319783 bytes, checksum: 6078f95095f94cbeca76282ad5bf6ca7 (MD5) Previous issue date: 2012-08-23 / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPES / This work is presented as a contribution to the field of design of digital systems integrated on chips (SoCs). Its main focus is to develop and deploy a (new) conceptual framework for the implementation of digital integrated circuits, with a strong emphasis on project management, called LASICProcess. As a natural consequence of the work and serving as a proof of concept, is presented a web application that implements the proposed framework. Among other aspects, it presents a description of the inclusion of a formal project management layer in the digital integrated circuits design flow used by the toolset of open and free software: the Alliance CAD System. The application, which carries the same name as the framework, allows the use of these tools remotely (without the need to install any software on the client side), provides total isolation of the corporate environment with respect to the user interface and was born with a strong vocation to become a powerful resource for collaborative work and even the distance training of human resources for the design of digital integrated circuits. Special care has been devoted to showing that the set of tools used, although being developed and used primarily in academia, provides support to all disciplines addressed and required by commercial and industrial environments for corresponding tasks, as well as to the possibility of (re) configuration of the proposed environment, in order to exchange all or part of the tools ALLIANCE by its equivalent from another provider. / Este trabalho é apresentado como uma contribuição para a área de projetos de sistemas digitais integrados em chips (SoCs). Seu foco principal é desenvolver e implantar um (novo) framework conceitual para a implementação de circuitos integrados digitais, com forte ênfase no gerenciamento de projetos, chamado LASICProcess. Como consequência natural do trabalho e servindo como prova de conceito, é apresentada uma aplicação web que implementa o framework proposto. Entre outros aspectos, ele apresenta a descrição da inclusão de uma camada formal de gestão de projetos no Fluxo de projeto de circuitos integrados utilizado pelo conjunto de ferramentas do Alliance CAD System, de software aberto e livre. A aplicação, que leva o mesmo nome do framework, permite a utilização dessas ferramentas remotamente (sem a necessidade de instalação de nenhum software do lado cliente), provê isolação total do ambiente corporativo com relação à interface do usuário e nasceu com forte vocação para se tornar um potente recurso de trabalho colaborativo e mesmo de formação a distância de recursos humanos para o projeto de circuitos integrados digitais . Especial cuidado foi dedicado à demonstração de que o conjunto de ferramentas utilizado, embora sendo desenvolvido e utilizado principalmente em meio acadêmico, provê suporte a todas as disciplinas contempladas e exigidas pelos ambientes industriais e comerciais para tarefas correspondentes, assim como à possibilidade de (re)configuração do ambiente proposto, para troca total ou parcial das ferramentas ALLIANCE por suas equivalentes de outro provedor.