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Caractérisation du domaine C-terminal de l'ARN polymérase II et de la phosphatase Glc7 dans la terminaison transcriptionnelle chez Saccharomyces cerevisiaeCollin, Pierre 12 1900 (has links)
No description available.
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Comparative Analysis: Successes and Failures of St. LouisAnane-Boakye, Stephen 01 January 2016 (has links)
The St. Louis School District (SLSD) provided its students with a virtual education program (VEP) but abandoned it following a cut in federal funding, omitting an alternative pathway for students to complete their education. The problem addressed in this study was the effect of technology and management's decision to discontinue the VEP. The purpose of this qualitative study was to determine management's role and the effect of the technology in discontinuing the VEP. Dewey's theory of education and Koskela and Howell's theory of management established the theoretical foundation for the study. A purposeful sampling selection approach was used to recruit 8 administrator and teacher participants who were knowledgeable about the VEP and who worked in their respective districts. An interview questionnaire was created and used to collect data. The data were processed and analyzed using the thematic analysis approach. The results revealed that technology was not a problem for the 3 school districts, but the SLSD did not prioritize the VEP in its budget. The results of this study might help other institutions keep their online program intact in the event a similar situation occurs. The implications for social change could be that securing a VEP could contribute in producing more well-educated citizens to work in higher-level jobs, drive business development, and contribute to community development in society.
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Public hearings on the choice of termination of pregnancy : a case of Limpopo Provincial LegislatureHarmse, Jocelyn Lavern January 2014 (has links)
Thesis (MPA.) -- University of Limpopo, 2014 / The aim of the study was to determine whether Members of the Limpopo Provincial Legislature misrepresented members of the public in the policy and decision making process. The Choice on Termination of Pregnancy Amendment Act, No. 213 of 2008, when passed in Parliament, might have had good intensions, but has instead led to unintended consequences. Both qualitative and quantitative research methods were used in this study. Questionnaires were used to collect the primary data from MPLs, staff of the Limpopo Legislature and members of the public in districts of the Province while the secondary data was collected from online databases and through literature reviews.
A random sampling method was used to collect primary data for this research by using various data collection methods such as questionnaires, face to face and telephone interviews. The collected data was captured in Ms Excel 2007, and then analysed and presented using graphs and tables.
Results of this study indicate that the majority of people in Limpopo were not in favour of the bill in question. This was evident in the video recording that was taken at the public hearing held in the Vhembe District where the emotions and expressions including the language used by members of the public was witnessed. The Committee Report that was tabled in the House by the Chairperson of the Committee stated that all districts in the Province were not in favour of the bill. It also became evident that indeed MPLs did not debate the report in the House and also did not consider inputs of the masses made during public hearings before a provincial mandate was given to Permanent delegates at the National Council of Province (NCOP) to vote in favour of the bill.
It can thus be concluded that MPLs can take a decision on a bill even if the masses are against it. This clearly indicates that the voices of the people are indeed heard since public hearings are conducted, but all is merely done to comply with the Constitutional mandate.
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Etudes au microscope électronique du transport des protéines durant la traduction chez E. Coli, et de la terminaison de la traduction chez l'homme / E. coli co-translational protein targeting and human translation termination studied by electron microsocopyColberg, Clara Ottilie Freifrau Loeffelholz von 05 November 2013 (has links)
La particule de reconnaissance du signal (signal recognition particle-SRP) et son récepteur (FtsY chez Escherichia coli) médiatise le processus simultané de traduction-ciblage de la protéine en dirigeant le complexe ribosome-nascent chain (RNCs) vers la membrane de destination. La reconnaissance par la SRP d'une charge RNC à transporter dépend de la présence de la partie N-terminale. L'assemblage de Ftsy au complexe RNC-PRS entraine plusieurs changements de configuration de SRP et de FtsY durant le cycle de direction. D'abord un stade « précoce » sans GTP est adopté. Celui-ci est stabilisé par le RNC. Ensuite une configuration « fermée » avec GTP est formée. Cette dernière peut s'activer pour hydrolyser GTP, elle entre alors dans sa configuration « active ». La succession de ces trois étapes conduit à la libération du complexe SRP-récepteur d'avec le ribosome et de sa protéine en cours de traduction, et leur mise à disposition au pore de la membrane. Dans ce projet, notre intérêt se limite à la traduction par le ribosome de la séquence signale EspP (RNCEspP). In vivo, EspP est une protéine dont le ciblage vers le récepteur membranaire se réalise après la traduction. Cependant il arrive que RNCEspP se lie au complexe SRP-FtsY, faisant échouer le ciblage. Nous avons étudié les bases structurales du rejet de RNCEspP par SRP et FtsY. Pour cela nous avons effectué la comparaison de la structure RNCEspP-SRP-FtsY obtenue par observation au cryo-microscope électronique avec d'autres complexes ribosome-SRP-récepteurs traduisant la charge FtsQ, qui est elle normalement ciblé par SRP. Nous avons cherché à observer la différence de structure entre les complexes SRP-FtsY dans les deux cas. Deux différences majeurs entre les complexes de ciblages contenants les séquences RNCFtsQ et RNCEspP ont été observés. Premièrement, dans le cas de la structure de RNCEspP le domaine M -Ffh est attaché à l'hélice 59 du ribosome, alors que celui-ci est détaché dans le cas de la structure de RNCFtsQ. Nous pensons que le domaine M empêche la libération de la séquence de signal, étape nécessaire à la réalisation du ciblage. Deuxièmement, dans le cas de la structure du complexe avec RNCEspP l'arrangement Ffh-FtsY avec le domaine NG était flexible. Ceci indiquerait que le complexe “précoce” formé sur RNCEspP est moins stable que celui formé sur RNCFtsQ. Une étude biochimique utilisant le transfert d'énergie via résonance fluorescente a corroboré ce résultat, montrant que FTS Y est lié avec une affinité moindre dans le cas du complexe précoce formé sur RNCEspP et que la reconfiguration au stade de complexe fermé est moins efficace. Une analyse biochimique plus poussée des variantes de la séquence de EspP montre que la partie N-Terminale de la séquence est la principale cause de rejet du cycle de ciblage via SRP.Dans un second projet, nous avons étudié la configuration “fermée” de SRP et ftsY en complexe avec une charge RNC stabilisée par un analogue non-hydrolysable de GTP (GMP-PCP). Pour franchir la barrière cinétique qui permet de passer du complexe précoce au complexe fermé, nous avons utilisé une version tronquée de FtsY, à laquelle la séquence terminale avait été amputée de tout le domaine acide (A-) ainsi que de la première hélice alpha du domaine NG. De plus, pour la formation du complexe, nous avons utilisé une construction contenant les 50 premiers acides aminés du leader peptidase (RNCLep50). En l'absence de nucléotides, notre reconstruction au cryo-EM a montré une configuration similaire à celle du stade précoce, dans laquelle Ftsy et Ffh- domaine NG, sont proche du tetraloop de la 4.5 S ARN. Une incubation avec GMP-PCP induit un détachement du domaine NG d'avec la queue du tetraloop. Il semblerait que les domaines NG soient flexibles dans l'état clos, et non attaché à la terminaison ouverte de l'ARN. / The signal recognition particle (SRP) and its receptor (FtsY in Escherichia coli) mediate co-translational protein targeting by delivering ribosome nascent chain complexes (RNCs) to the target membrane. Recognition of an RNC cargo by SRP is dependent on an N-terminal signal sequence. Binding of FtsY to the RNC-SRP complex leads to several conformational changes of SRP and FtsY during the targeting cycle: first, an “early” GTP-independent state is adopted which is stabilized by the RNC, subsequently a “closed” GTP- dependent conformation is formed which can activate itself to hydrolyze GTP (the “activated” state). Faithful completion of all three steps leads to release of the cargo from SRP-FtsY and hand over of the RNC to the translocation pore.It has been shown for E. coli that cargos can be rejected from the SRP pathway during all targeting steps. In the first project, our interest concentrates on ribosomes translating the EspP signal sequence (RNCEspP). In vivo, EspP is a post-translationally targeted protein, but RNCEspP has been shown to be bound by SRP and FtsY leading to a non-productive “early”-like RNCEspP-SRP-FtsY complex. Using single particle cryo-electron microscopy (EM), we analysed the structural basis for the rejection of RNCEspP by SRP and FtsY. Comparison of our RNCEspP-SRP-FtsY cryo-EM structure to other available cryo-EM structures of co-translational targeting complexes containing the correct cargo RNCFtsQ unravelled differences in the SRP-FtsY structure between a correct cargo and an incorrect cargo. Two major differences between the targeting complexes containing the cargos RNCFtsQ and RNCEspP were observed: first, the Ffh M-domain was attached to ribosomal RNA helix 59 of RNCEspP, while it was detached from this site in the case of RNCFtsQ. It could be that such an ordered M-domain is hampering the release of the signal sequence which is required for successful completion of targeting. Second, the Ffh-FtsY NG-domain arrangement was flexible in the complex with RNCEspP in comparison to RNCFtsQ indicating that the "early"-like complex formed on RNCEspP is less stable. Biochemical data using fluorescence resonance energy transfer corroborated these results, showing that FtsY is bound with lower affinity in the RNCEspP “early” complex and that the rearrangement to the “closed” conformation is less efficient. Further biochemical analysis of EspP signal sequence variants showed that mainly the N-terminal extension of the EspP signal sequence is responsible for its rejection from the SRP pathway.
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PEX1 Mutations in Australasian Patients with Disorders of Peroxisome BiogenesisMaxwell, Megan Amanda, n/a January 2004 (has links)
The peroxisome is a subcellular organelle that carries out a diverse range of metabolic functions, including the b-oxidation of very long chain fatty acids, the breakdown of peroxide and the a-oxidation of fatty acids. Disruption of peroxisome metabolic functions leads to severe disease in humans. These diseases can be broadly grouped into two categories: those in which a single enzyme is defective, and those known as the peroxisome biogenesis disorders (PBDs), which result from a generalised failure to import peroxisomal matrix proteins (and consequently result in disruption of multiple metabolic pathways). The PBDs result from mutations in PEX genes, which encode protein products called peroxins, required for the normal biogenesis of the peroxisome. PEX1 encodes an AAA ATPase that is essential for peroxisome biogenesis, and mutations in PEX1 are the most common cause of PBDs worldwide. This study focused on the identification of mutations in PEX1 in an Australasian cohort of PBD patients, and the impact of these mutations on PEX1 function. As a result of the studies presented in this thesis, twelve mutations in PEX1 were identified in the Australasian cohort of patients. The identified mutations can be broadly grouped into three categories: missense mutations, mutations directly introducing a premature termination codon (PTC) and mutations that interrupt the reading frame of PEX1. The missense mutations that were identified were R798G, G843D, I989T and R998Q; all of these mutations affect amino acid residues located in the AAA domains of the PEX1 protein. Two mutations that directly introduce PTCs into the PEX1 transcript (R790X and R998X), and four frameshift mutations (A302fs, I370fs, I700fs and S797fs) were identified. There was also one mutation found in an intronic region (IVS22-19A>G) that is presumed to affect splicing of the PEX1 mRNA. Three of these mutations, G843D, I700fs and G973fs, were found at high frequency in this patient cohort. At the commencement of these studies, it was hypothesised that missense mutations would result in attenuation of PEX1 function, but mutations that introduced PTCs, either directly or indirectly, would have a deleterious effect on PEX1 function. Mutations introducing PTCs are thought to cause mRNA to be degraded by the nonsense-mediated decay of mRNA (NMD) pathway, and thus result in a decrease in PEX1 protein levels. The studies on the cellular impact of the identified PEX1 mutations were consistent with these hypotheses. Missense mutations were found to reduce peroxisomal protein import and PEX1 protein levels, but a residual level of function remained. PTC-generating mutations were found to have a major impact on PEX1 function, with PEX1 mRNA and protein levels being drastically reduced, and peroxisomal protein import capability abolished. Patients with two missense mutations showed the least impact on PEX1 function, patients with two PTC-generating mutations had a severe defect in PEX1 function, and patients carrying a combination of a missense mutation and a PTC-generating mutation showed levels of PEX1 function that were intermediate between these extremes. Thus, a correlation between PEX1 genotype and phenotype was defined for the Australasian cohort of patients investigated in these studies. For a number of patients, mutations in the coding sequence of one PEX1 allele could not be identified. Analysis of the 5' UTR of this gene was therefore pursued for potential novel mutations. The initial analyses demonstrated that the 5' end of PEX1 extended further than previously reported. Two co-segregating polymorphisms were also identified, termed 137 T>C and 53C>G. The -137T>C polymorphism resided in an upstream, in-frame ATG (termed ATG1), and the possibility that the additional sequence represented PEX1 coding sequence was examined. While both ATGs were found to be functional by virtue of in vitro and in vivo expression investigations, Western blot analysis of the PEX1 protein in patient and control cell extracts indicated that physiological translation of PEX1 was from the second ATG only. Using a luciferase reporter approach, the additional sequence was found to exhibit promoter activity. When examined alone the -137T>C polymorphism exerted a detrimental effect on PEX1 promoter activity, reducing activity to half that of wild-type levels, and the -53C>G polymorphism increased PEX1 promoter activity by 25%. When co-expressed (mimicking the physiological condition) these polymorphisms compensated for each other to bring PEX1 promoter activity to near wild-type levels. The PEX1 mutations identified in this study have been utilised by collaborators at the National Referral Laboratory for Lysosomal, Peroxisomal and Related Genetic Disorders (based at the Women's and Children's Hospital, Adelaide), in prenatal diagnosis of the PBDs. In addition, the identification of three common mutations in Australasian PBD patients has led to the implementation of screening for these mutations in newly referred patients, often enabling a precise diagnosis of a PBD to be made. Finally, the strong correlation between genotype and phenotype for the patient cohort investigated as part of these studies has generated a basis for the assessment of newly identified mutations in PEX1.
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分散系統中的飢餓,臨界競賽,死結及終止 / Starvation, Critical Race, Deadlock and Termination in Distributed Systems王耀輝, Wang, Yao Huei Unknown Date (has links)
分散式系統具有資源共享及運算更有效率等優點,使得分散式系統的應用越來越廣泛,有關分散式系統的研究也越受重視。一些存在分散式系統中的不正常現象,如:死結(deadlock),饑餓(stravation),及臨界競賽(critical race)往往會抵消掉資源共享的好處並且容易產生通訊(communication)的錯誤,另外,保證一分散系統中行程(process)均能正確的執行終止(termination)也是一項值得研究的重要課題。
本篇論文將就分散系統中的死結、饑餓、臨界競賽及中止等問題之過去的文獻提出討論,並分別比較優、缺點,最後列出一些尚未解決及值得深入研究的問題。 / There are some addvantages of distributed systems, such as resources sharing and computing efficiency. Thus, the applications of distributed systems are more prevalent. The research of distributed systems had got great worth. Some undesired or abcdrmal behaviors such as deadlock, starvation, and critical race exist in distributed systems, which often offset the advantages of resources sharing and are prone to communication errors. It is very important to guarantee the processes of a distributed system which can terminate finitely.
In this thesis, we'll have thorough discussions and comparisons of those four properties through literature survey and then point out some unsolved problems at last.
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Versatile Implementations of an Improved Cell-Free System for Protein Biosynthesis : Functional and structural studies of ribosomal protein L11 and class II release factor RF3. Novel biotechnological approach for continuous protein biosynthesis / Mångsidig Användning av ett Förbättrat Cell-Fritt System för Proteinbiosyntes : Funktionella och strukturella studier av ribosomalt protein L11 och klass II release faktor RF3. Ny bioteknologisk metod för kontinuerlig proteinbiosyntesBouakaz, Lamine January 2006 (has links)
<p>Advances in genetics, proteomics and chromatography techniques have enabled the successfully generation of a cell-free bacterial translation system composed of highly pure and active components. This system provided an ideal platform for better elucidating the mechanism of each individual step of the prokaryotic protein biosynthesis and the function of the translation factors involved in the process. </p><p>In doing so, we have discovered that the N-terminal domain or complete deletions of the ribosomal protein L11 reduced the termination efficiency of RF1 on cognate stop codons by four to six folds. The L11 deletions also conferred a two folds decrease in the missense error suggesting the increased nonsense termination accuracy of RF2 by two folds, which would clarified previous in vivo observations. </p><p>The versatility of the cell-free system has provided the additional possibility to study the effects of class II release factor RF3 mutations in mediating fast dissociation of class I release factors RF1 and RF2 from the post-termination ribosome complexes. The results show a series of mutations within RF3 conferring considerable reduction of the class I release factors recycling rate. These observations together with sequence alignment studies suggest the possible location on RF3 of the class I release factors interaction site. </p><p>In addition, the utilization of the cell-free system has made it possible to develop a new biotechnological approach for continuous production of polypeptides, based on gel filtration chromatography. The pilot trials have so far resulted in a six fold production increase of the MFTI test peptide compared to the conventional batch method.</p>
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Elusive Peacemakers : A Bargaining Perspective on Mediation in Internal Armed ConflictsSvensson, Isak January 2006 (has links)
<p>This composite dissertation explores mediation in internal armed conflicts from a bargaining perspective. Four separate essays investigate why mediation occurs, why it is successful, and why peace guarantors’ commitments are credible. Essay 1 examines the conditions under which mediation takes place. The study argues that whereas it is costly for governments to accept international mediation, it is a less costly intervention tool for potential third parties. This argument implies that mediation will be more likely when and where negotiated settlements are least likely to be reached, a contention that is supported by empirical tests. Essay 2 reviews the contemporary debate on what types of mediators that can disseminate information in a credible manner, and formulates a set of testable hypotheses on mediation partiality. The analysis shows that negotiated settlements are more likely if biased or interested mediators intervene, while neutral mediators are not associated with mediation success. Essay 3 elaborates on the role of biased mediators. It proposes that rebels face a commitment problem when negotiated settlements are to be reached, which government-biased mediators can mitigate. The study finds that such types of mediators outperform rebel-biased mediators in terms of helping combatants to settle the armed conflict. Essay 4 deals with the commitment problem that comes to pass between, on the one hand the primary parties, and on the other, the potential peace guarantors. The study probes the requests and promises for third-party security guarantees and suggests that the reputation of the United Nations (UN) enhances its credibility as peace guarantor compared to non-UN actors. It finds that although the UN is more restrictive with its promises, it is more likely that peacekeeping forces will be provided if the UN is one of the guarantors. In sum, utilizing unique data from two time-periods (post World War II and post Cold War), this dissertation arrives at new insights on the role of mediators in bringing about negotiated settlements of internal armed conflicts.</p>
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Versatile Implementations of an Improved Cell-Free System for Protein Biosynthesis : Functional and structural studies of ribosomal protein L11 and class II release factor RF3. Novel biotechnological approach for continuous protein biosynthesis / Mångsidig Användning av ett Förbättrat Cell-Fritt System för Proteinbiosyntes : Funktionella och strukturella studier av ribosomalt protein L11 och klass II release faktor RF3. Ny bioteknologisk metod för kontinuerlig proteinbiosyntesBouakaz, Lamine January 2006 (has links)
Advances in genetics, proteomics and chromatography techniques have enabled the successfully generation of a cell-free bacterial translation system composed of highly pure and active components. This system provided an ideal platform for better elucidating the mechanism of each individual step of the prokaryotic protein biosynthesis and the function of the translation factors involved in the process. In doing so, we have discovered that the N-terminal domain or complete deletions of the ribosomal protein L11 reduced the termination efficiency of RF1 on cognate stop codons by four to six folds. The L11 deletions also conferred a two folds decrease in the missense error suggesting the increased nonsense termination accuracy of RF2 by two folds, which would clarified previous in vivo observations. The versatility of the cell-free system has provided the additional possibility to study the effects of class II release factor RF3 mutations in mediating fast dissociation of class I release factors RF1 and RF2 from the post-termination ribosome complexes. The results show a series of mutations within RF3 conferring considerable reduction of the class I release factors recycling rate. These observations together with sequence alignment studies suggest the possible location on RF3 of the class I release factors interaction site. In addition, the utilization of the cell-free system has made it possible to develop a new biotechnological approach for continuous production of polypeptides, based on gel filtration chromatography. The pilot trials have so far resulted in a six fold production increase of the MFTI test peptide compared to the conventional batch method.
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Elusive Peacemakers : A Bargaining Perspective on Mediation in Internal Armed ConflictsSvensson, Isak January 2006 (has links)
This composite dissertation explores mediation in internal armed conflicts from a bargaining perspective. Four separate essays investigate why mediation occurs, why it is successful, and why peace guarantors’ commitments are credible. Essay 1 examines the conditions under which mediation takes place. The study argues that whereas it is costly for governments to accept international mediation, it is a less costly intervention tool for potential third parties. This argument implies that mediation will be more likely when and where negotiated settlements are least likely to be reached, a contention that is supported by empirical tests. Essay 2 reviews the contemporary debate on what types of mediators that can disseminate information in a credible manner, and formulates a set of testable hypotheses on mediation partiality. The analysis shows that negotiated settlements are more likely if biased or interested mediators intervene, while neutral mediators are not associated with mediation success. Essay 3 elaborates on the role of biased mediators. It proposes that rebels face a commitment problem when negotiated settlements are to be reached, which government-biased mediators can mitigate. The study finds that such types of mediators outperform rebel-biased mediators in terms of helping combatants to settle the armed conflict. Essay 4 deals with the commitment problem that comes to pass between, on the one hand the primary parties, and on the other, the potential peace guarantors. The study probes the requests and promises for third-party security guarantees and suggests that the reputation of the United Nations (UN) enhances its credibility as peace guarantor compared to non-UN actors. It finds that although the UN is more restrictive with its promises, it is more likely that peacekeeping forces will be provided if the UN is one of the guarantors. In sum, utilizing unique data from two time-periods (post World War II and post Cold War), this dissertation arrives at new insights on the role of mediators in bringing about negotiated settlements of internal armed conflicts.
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