Extracellular vesicles (EVs) are membrane-enclosed nanoparticles containing proteins and nucleic acid cargo. These vesicles are released by almost all cell types and provide an effective and ubiquitous path for intercellular communication and transmission of pathogenic and signaling molecules among cells. Research into potential biomarkers isolated from EV has been propelled by the development of methods and tools to acquire them by minimally and non-invasive means, which reinforces their great diagnostic potential. In the context of cancer, this opens the door to apply EV based liquid biopsy for early detection prior to alternate, more prevailing diagnostic tools like imaging studies. In autoimmune diseases, EVs play a crucial role in immune responses and as immunomodulatory agents as they can modulate the function of a wide variety of immune cells, especially in antigen-presenting cells (APCs). Several efforts have been made to study EVs and their cargo in numerous disease models, but very few in autoimmunity. Autoimmune diseases are chronic, have been underexplored especially in the omics area, and their diagnosis and treatment rely on traditional therapy. Therefore, there is a need for efficient methods to elucidate biomarkers that could provide additional layers of information for treatment, diagnosis, and prognosis. Additionally, protein post-translational modifications (PTMs), such as phosphorylation, glycosylation, and acetylation, are involved in multiple essential cellular processes and represent an important mechanism of regulation for cellular physiological functions, leading to the development of effective and targeted therapeutics. Discovery and profiling PTMs have established the relevance of PTMs in EVs and associated EV functions and novel applications. This dissertation proposes integrated proteomic strategies to efficiently isolate and analyze EVs in human plasma from different types of pathologies like cancer and autoimmune diseases. The main focus is the development of the platforms, to not only isolate the proteome from EVs, but also PTMs including phosphorylation, glycosylation and acetylation, simultaneously. Chapter one, which is the core of this dissertation, describes the platform to sequentially isolate and analyze the EV proteome, phosphoproteome and glycoproteome from human plasma. Chapters two and three focus on the ongoing application of this platform with slight modifications into different disease models, in this case breast cancer subtypes and autoimmune diseases.

Testing for autoantibodies (AABs) is becoming more and more relevant, not only for diagnosing autoimmune diseases (AIDs) but also for the differentiation of defined AID subtypes with different clinical manifestations, course and prognosis as well as the very early diagnosis for adequate management in the context of personalized medicine. A major challenge to improve diagnostic accuracy is to harmonize or even standardize AAB analyses. This review presents the results of the 12th Dresden Symposium on Autoantibodies that focused on several aspects of improving autoimmune diagnostics. Topics that are addressed include the International Consensus on ANA Patterns (ICAP) and the International Autoantibody Standardization (IAS) initiatives, the optimization of diagnostic algorithms, the description and evaluation of novel disease-specific AABs as well as the development and introduction of novel assays into routine diagnostics. This review also highlights important developments of recent years, most notably the improvement in diagnosing and predicting the course of rheumatoid arthritis, systemic sclerosis, idiopathic inflammatory myopathies, and of autoimmune neurological, gastrointestinal and liver diseases; the potential diagnostic role of anti-DFS70 antibodies and tumor-associated AABs. Furthermore, some hot topics in autoimmunity regarding disease pathogenesis and management are described.

<p>  </p> <p>The cGAS-STING axis represents a key pathway towards the activation of innate immunity against pathogens. However, persistent activation can lead to the development of autoimmune diseases, driving the need for the development of antagonists of cGAS-STING pathway. Herein, we describe the discovery of a small molecule STING binder HSD1077 through a STING based fluorescence polarization (FP) displacement assay. Initial SAR studies utilizing the FP displacement assay suggests the presence of pyrazole moieties critical for HSD1077 towards STING Binding. Additionally, we show that HSD1077 serves as an antagonist of the cGAS-STING pathway and effectively suppresses type-1 interferon expression upon 2’-3’cGAMP induction in both murine RAW macrophages and human THP-1 monocytes. HSD1077 in conclusion shows potential as a lead compound towards the further development of anti-inflammatory drugs. </p>

Serine/Arginine splicing factor 1 (SRSF1), a member of the Serine/Arginine rich (SR) RNA-binding proteins (RBPs) family, regulates mRNA biogenesis at multiple steps and is deregulated in cancer and autoimmune diseases. Preliminary studies show that members of the SR protein family play a role in cellular transcription. We investigated SRSF1’s role in cellular gene transcription utilizing time-course RNA-Seq and nuclear run-on assays, validating a subset of genes transcriptionally regulated following SRSF1 overexpression. Pathway analysis showed that genes in the TNF/IL17 pathways were enriched in this dataset. Furthermore, we showed that MyD88, a strong activator of TNF transcription through transcription factors NF-κB and AP-1, is a primary target of SRSF1’s transcriptional activity. We propose that SRSF1 activates the transcription factors NF-κB and AP-1 through MyD88 pathway. SRSF1 overexpression regulates several genes that are deregulated in malignancies and immune disease, suggesting a role for SRSF1’s transcriptional activity in oncogenesis and immune response regulation. / Includes bibliography. / Thesis (M.S.)--Florida Atlantic University, 2020. / FAU Electronic Theses and Dissertations Collection

No description available.

The Major Histocompatibility Complex (MHC) is a genomic region in chromosome 6 which has been consistently found to be associated with the risk of developing virtually all common autoimmune diseases. Although its importance in disease pathogenesis has been known for decades, efforts to disentangle the roles of the classical human leukocyte antigens (HLA) and other variants responsible for the susceptibility to disease have often met with limited success, owing to the complex structure and extreme heterogeneity of the region. In this thesis, I interrogate the MHC for association with three common autoimmune diseases, ankylosing spondylitis, psoriasis and multiple sclerosis, with the aim of confirming the previously-reported associations and of identifying novel ones. To do so, I employ a systematic, joint analysis of single nucleotide polymorphism (SNP) and HLA allele data, in a logistic regression framework, using a recently developed algorithm to predict the HLA alleles for samples where such information is unavailable. To ensure the reliability of the analysis, I apply stringent quality control procedures and integrate over the uncertainty of the HLA allele predictions. Moreover, I resolve the haplotype phase of individuals from the HapMap project to create reliable reference panels, used in both HLA prediction and in quality control procedures. By directly testing HLA subtypes for association with the disease, the power to detect such associations is increased. I present the results of the analysis on the three disease phenotypes and discuss the evidence for important novel findings amongst both SNPs and HLA alleles in two of the diseases. In the final part of this thesis, I introduce a novel, model-based approach to detect inconsistencies in the data and show how it can be used to flag problematic SNPs which conventional quality control procedures may fail to identify.

Summary: This diploma thesis deals with the relation between autoimmune processes at biological level (through proven neurological autoimmune disease - multiple sclerosis) and possible autoaggressive processes at the mental level. It is divided into several points. The first one introduces human immunity in general. The first part is followed by immune system description, including autoimmunity and the principle of diseases of this system. Thereafter, psychological aggression is described, in which the division into aggression and auto- aggression fits. This is followed by chapters on projective psychodiagnostics taking into account the detection of various forms of aggression. Then, the thesis focuses on the study of possible auto-aggressive manifestations in patients suffering from the most widespread neurological autoimmune disease, multiple sclerosis. The second half of the thesis describes the author's research on this topic.

O diabetes mellitus do tipo 1 (DM-1) é uma doença autoimune caracterizada pela destruição seletiva de células pancreáticas produtoras de insulina. O tratamento convencional é feito com insulina e existe atualmente a necessidade de desenvolver alternativas terapêuticas para o DM-1, como por exemplo o tratamento com células-tronco. As células estromais mesenquimais multipotentes (multipotent mesenchymal stromal cells-MSCs) representam uma fonte de células ideal para terapias celulares em virtude de seu fácil isolamento, expansão e capacidades imunomoduladora e regenerativa. Ainda não está esclarecido se MSCs isoladas de indivíduos com doenças autoimunes possuem alterações funcionais que poderiam limitar seu uso no contexto do transplante autólogo. Já foi descrito que MSCs de pacientes com esclerose múltipla, artrite reumatoide e lúpus eritematoso sistêmico possuem alterações fenotípicas e/ou funcionais. No entanto, pouco se sabe acerca das características das MSCs de pacientes com DM-1. Desse modo, o objetivo principal deste trabalho foi avaliar a eficácia da infusão de MSCs derivadas de pacientes com DM-1 no tratamento do diabetes experimental e comparar os resultados obtidos com o tratamento feito com MSCs isoladas de indivíduos saudáveis. Além disso, investigamos os efeitos da hiperglicemia in vitro sobre as MSCs, estabelecemos a melhor via de administração das MSCs em camundongos diabéticos e caracterizamos fenotipicamente e funcionalmente as MSCs de pacientes com DM-1. O diabetes experimental foi induzido em camundongos C57BL/6 por meio da administração de estreptozotocina. MSCs isoladas de tecido adiposo murino (ADMSCs) foram administradas em camundongos diabéticos pelas vias intravenosa, intraperitoneal, intrapancreática ou intraesplênica. MSCs foram isoladas da medula óssea de pacientes com DM-1 recém-diagnosticado (DM1-MSCs) e de indivíduos saudáveis (C-MSCs). A morfologia, tamanho celular, perfil imunofenotípico, diferenciação em adipócitos, migração e capacidade imunossupressora foram avaliados. 1x106 DM1-MSCs ou C-MSCs foram injetadas pela via intraesplênica em camundongos diabéticos 20 dias após indução do diabetes. A glicemia foi monitorada periodicamente. Após sacrifício dos camundongos, avaliamos a histologia do tecido pancreático, níveis de insulina circulante, a população de células T reguladoras no baço e linfonodos pancreáticos, o perfil de citocinas no soro e homogeneizado pancreático. A migração das ADMSCs Luc+ injetadas foi avaliada por meio de processamento de imagem baseado em bioluminescênia. Sete dias após cultivo com diferentes concentrações de glicose, as MSCs não apresentaram alterações nos parâmetros avaliados. A injeção de MSCs em camundongos diabéticos por meio da via intraesplênica foi a mais eficiente, promovendo reversão da hiperglicemia em cerca de 70-100% dos camundongos tratados. As DM1-MSCs apresentaram morfologia, tamanho celular, perfil imunofenotípico, diferenciação in vitro em adipócitos e capacidade imunossupressora in vitro semelhante às MSCs de indivíduos saudáveis. No entanto, as DM1-MSCs apresentaram maior migração in vitro em relação às C-MSCs. Não houve diferenças significantes do tratamento de camundongos diabéticos feito com DM1-MSCs ou C-MSCs, uma vez que ambas MSCs foram capazes de reverter a hiperglicemia, promover aumento da massa de células pancreáticas, bem como diminuir os níveis de IL-2 e IFN- no pâncreas dos camundongos tratados. Considerando-se que as MSCs de pacientes com DM-1 recém-diagnosticados não apresentaram alterações fenotípicas ou funcionais, elas poderiam ser transplantadas de forma autóloga nesses pacientes, representando uma nova alternativa terapêutica para o DM-1. / Type 1 diabetes mellitus (DM-1) is an autoimmune disease characterized by a selective destruction of insulin-producing pancreatic cells. The conventional treatment for DM-1 patients is the administration of insulin and new therapeutic approaches are needed, such as stem cell therapies. Mesenchymal stromal cells (MSCs) represent an important stem cell source for cell therapies because they are easy to isolate, present good capacity of expansion and they exhibit immunomodulatory and regenerative properties. However, it is not fully understood if MSCs from autoimmune patients are functionally defective or not, limiting their use in the autologous transplantation setting. There are some reports in the literature showing that MSCs from patients with multiple sclerosis, rheumatoid arthritis or systemic lupus erythematosus exhibit phenotypical and/or functional alterations. However, little is known about MSCs isolated from DM-1 patients (DM1-MSCs). Taking this into account, the aim of this work was to evaluate the efficacy of DM1-MSCs transplantation in diabetic mice and to compare this treatment with the treatment using MSCs isolated from healthy individuals. We also evaluated the influence of in vitro hyperglycemia on MSCs and we established the best route of MSCs administration in diabetic mice. The phenotypical and functional characteristics of DM1-MSCs were analyzed. The experimental diabetes model was induced in C57BL/6 male mice by the administration of streptozotocin. MSCs were isolated from mouse adipose tissue (ADMSCs) and injected in diabetic mice by intravenous, intraperitoneal, intrapancreatic or intrasplenic routes. DM1-MSCs were isolated from bone marrow aspirates of newly-diagnosed type 1 diabetes patients and C-MSCs were obtained from healthy individuals. The morphology, immunophenotypic profile, cell size, adipocyte differentiation (in vitro), migration (in vitro) and immunosuppressive capacity (in vitro) were evaluated. 1x106 DM1-MSCs or C-MSCs were injected by intrasplenic route in diabetic mice 20 days after diabetes induction. Glycemia was frequently monitored. The pancreatic tissue (histology and immunohistochemistry), serum insulin levels, the regulatory T cells population in spleen and pancreatic lymph nodes, the serum and pancreatic homogenate cytokine profiles were evaluated after MSCs administration. The homing of ADMSCs Luc+ was analyzed by bioluminescence based image processing. MSCs cultured for seven days with different glucose concentrations did not exhibit alterations in all evaluated parameters. The intravenous, intraperitoneal, intrapancreatic or intrasplenic routes of MSCs administration were tested. The intrasplenic route was the most efficient and promoted diabetes reversion in about 70-100% of MSCs-treated mice. No differences in morphology, cell size, immunophenotypic profile, adipocyte differentiation and immunosuppressive capacity were found for DM1-MSCs when compared with C-MSCs. However, the migration capacity of DM1-MSCs was higher than C-MSCs. The intrasplenic administration of DM1-MSCs or C-MSCs in diabetic mice similarly promoted a decrease in blood glucose levels, improved insulin-producing cell mass and modulated the production of IL-2 e IFN- in pancreatic tissue. Taking into account that MSCs from newly-diagnosed DM-1 patients did not show phenotypical and functional alterations, these cells could be isolated from diabetic patients representing a new therapeutic approach for DM-1 patients (autologous transplantation).

A saliva de insetos hematófagos possui moléculas capazes de modular o sistema imune do hospedeiro. Com base na literatura a respeito das atividades presentes na saliva de Aedes aegypti, investigamos se o EGS dessa espécie era capaz de modular a EAE. Imunizamos animais C57BL/6 com MOG35-55, e realizamos um tratamento com EGS. O tratamento com EGS diminuiu a incidência da doença e provocou um atraso no aparecimento dos sinais clínicos, além de estes serem mais brandos. Observamos que a modulação se deu na fase de indução da resposta imune, não na efetora. De fato, o EGS consegue suprimir a doença por 4 vias: 1) diminuindo a expressão de MHCII, CD80 e CD86 em células dendríticas, e diminuindo a produção de citocinas responsáveis pela indução das respostas Th1/Th17; 2) induzindo células produtoras de IL-10 in vivo; 3) induzindo apoptose em linfócitos T naive; 4) induzindo células com perfil Th2 produtoras de IL-4 e IL-5. Concluímos que o EGS é capaz de atuar na supressão dos sintomas durante o curso da EAE e na inibição do início da resposta imune. / The saliva of hematophagous insects has molecules that can modulate the host immune system. Based on the literature about activities found in Aedes aegypti saliva, we investigate if SGE of this species could modulate EAE. We have immunized C57BL/6 mice with MOG35-55, and carried out a treatment with SGE. The treatment with SGE reduced the incidence of disease and caused a delay onset of clinical signs making them softer. We have observed that modulation occured in the induction phase of immune response, not in effector phase. In fact, SGE can suppress the disease by four ways: 1) decreasing the expression of MHCII, CD80 and CD86 in dendritic cells and decreasing the production of cytokines responsible for Th1/Th17 response induction; 2) inducing cells producing IL-10 in vivo; 3) inducing apopotosis in naive T lymphocytes; 4) inducing cells Th2 producing IL-4 e IL-5. We came to the conclusion that SGE can act in supressing symptoms during the course of EAE and inhibiting the beggining of autoimmune response.

Objetivos. Alta prevalência de síndrome metabólica (SM) tem sido descrita recentemente em diferentes miopatias inflamatórias idiopáticas, mas não em síndrome antissintetase (SAS). Portanto, avaliamos a frequência de SM em SAS e a associação de SM com os fatores de risco de doenças cardiovasculares e as características da doença relacionada à SAS. Métodos. Trata-se de um estudo transversal, único centro, no qual 42 pacientes consecutivos com SAS foram pareados por sexo, idade, etnia e índice de massa corporal com 84 indivíduos saudáveis, no período de 2012 a 2015. Todos os pacientes apresentavam pelo menos quatro dos cinco itens dos critérios de Bohan e Peter (1975) e também os seguintes sinais e/ou sintomas no início da doença: artrite, acometimento pulmonar, fenômeno de Raynaud, febre, \"mãos de mecânico\" e autoanticorpos antissintetases. O status da SAS foi avaliado, baseando-se nos questionários de International Myositis Assessment and Clinical Studies Group (IMACS). Os dados clínicos, laboratoriais e terapêuticos foram coletados por meio de um protocolo padronizado. A SM foi definida de acordo com a Joint Interim Statement de 2009. A análise de adipocitocinas séricas (adiponectina, leptina e resistina) foi feita através de método padronizado, enquanto que a análise de resistência insulínica foi realizada através do método de Homeostatic Model Assessment (HOMA). Resultados. A idade mediana dos pacientes com SAS foi de 41,1 anos, com predominância de etnia branca e de sexo feminino. Os pacientes apresentaram prevalência maior de SM (42,9% vs. 13,1%; P < 0,001) e valor maior de resistência insulínica, quando comparados ao grupo controle. Além disso, os pacientes apresentaram maior nível sérico de resistina, em contraste com um menor nível de leptina e similar de adiponectina, quando comparado ao grupo controle. Em uma análise adicional, quando foram comparados os pacientes com SM (N=18) e sem (N=24) SM, os primeiros apresentavam maior idade (48,7 vs. 35,4 anos; P < 0,001), com duração semelhante da doença, status da doença, esquema terapêutico, resistência insulínica e nível sérico de adipocitocinas. Conclusões. Maior frequência de SM e maior valor de resistência insulínica foram observados em pacientes com SAS, com alto nível sérico de resistina e baixo nível de leptina. Além disso, os pacientes de SAS com SM apresentavam idade mais avançada, a exemplo do que ocorrem com outras miopatias inflamatórias idiopáticas com SM / Objectives. A high frequency of metabolic syndrome (MetS) has been recently described in different idiopathic inflammatory myopathies, but not for antisynthetase syndrome (ASS). Therefore, we determined the prevalence of MetS in ASS and the association of MetS with the risk factors of cardiovascular diseases and with ASS-related disease characteristics. Methods. A cross-sectional single center study of 42 consecutive patients with ASS was conducted from 2012 to 2015. For the control group, 84 healthy individuals were matched with patients for gender, age, ethnicity and body mass index-matched, in the same period. All patients had at least four of five items of Bohan and Peter\'s criteria (1975) and also the follow signal and/or symptoms at onset of disease: arthritis, pulmonary involvement, Raynaud\'s phenomenon, fever, \"mechanics\' hands\" and antisynthetase autoantibodies. The disease status was defined, basing on the International Myositis Assessment and Clinical Studies Group (IMACS) questionnaires. Clinical, laboratory and treatment data were collected using a standardized protocol. MetS was defined according to the 2009 Joint Interim Statement. The serum adipocytokine analysis (adiponectin, leptin and resistin) was performed by standardized method, whereas the insulin resistance was performed by Homeostatic Model Assessment (HOMA) method. Results. ASS patients had a median age of 41.1 years and were predominantly female and of white ethnicity. The patients had a higher frequency of MetS (42.9% vs. 13.1%; P < 0.001) and of insulin resistance than controls. Moreover, patients had higher resistin, lower leptin and similar adiponectin levels in serum than controls. Further analysis of the ASS patients with (N=18) and without (N=24) MetS revealed that individuals with the syndrome were older (48.7 vs. 35.4 years; P < 0.001) age at disease onset and had similar disease duration, disease status, treatment, insulin resistance and serum adipocytokine levels. Conclusions. The prevalence of MetS was high in patients with ASS, who also had serum resistin and low leptin levels. Moreover, ASS patients with MetS were older at disease onset, mirroring findings seen in other idiopathic inflammatory myopathies