This study presents mountain forest Norway spruce (Picea abies) injured by surface ozone and oxidative stress. Norway spruce is not a sensitive species but it is the most representative tree in our country and this is the reason to pay attention on its injury. Study was connected to the ozone measurement by CHMI in Jizerske mountains. Aim of our study was to find influence of surface ozone on the forest and show correlation between ozone concentrations, altitude and Norway spruce injury. Ozone concentrations are growing with the altitude. Increasing percentage of injury with growing concentrations and altitude was expected. Needles were collected at the altitude 750-1100 meters. Collected needle years were 2006, 2007 and 2009. The 2009 year was not evaluated because no symptoms were found. Injury was observed on the maroscopical, microscopical and biochemical level. Visual injury was assessed by percentage of injured needle surface by chlorosis and necrosis. Microscopical analysis studied injury on cross and longitudinal sections of needles. On the longitudinal sections were visible typically bone-cells. These cells have lost its shape by ozone stress and were narrowed in its width. Bone-cells were best visible near the stomata. Four symptoms were observed on the cross sections: tannin...

The main purpose of this thesis is to study and analyze how concepts of childhood and adolescence were constructed in scientific medicine during the period 1870 to 1930. The focus in the first part of the thesis is to study the sick girl as a stereotype in 1870–1900. In the late nineteenth-century, the poor health of girls was a popular topic in Swedish medical discourse. It was a well-established opinion that a substantial number of Swedish girls suffered from various diseases and ailments. Mass- and coeducation was under debate and physicians became interested in the impact of schools and schooling on children’s health. It is here shown that children, and in particularly adolescents, were de-fined as gendered creatures. The doctors emphasized the universal nature of adolescence and conceptualized pu-berty as a traumatic and risky stage of life and they also tended to focus on middle-class girls. Pubescent girls were seen as most vulnerable to external stress such as mental strain and physical demands. Physicians claimed that ill health inevitably followed when girls were educated in the same way as boys. However, boys and their health were discussed too. The most common ailments for both girls and boys were overstudy, anemia, headaches and disor-dered digestion. It was also shown in various studies, that poorer children were substantially inferior in weight as well as in height. Chlorosis was a common theme in late nineteenth-century medical discourse. Although it appeared mainly as a girls’ disease in medical books and in most sanitary journals, health studies for example, showed that chlorosis could also be a boys’ disease. However, sick boys were rarely spoken of. Medical opinions on overstudy, chlorosis and dress reform could be interpreted as a concern for unhealthy girls as future mothers of the nation. It is not my intention to advertise doctors as vicious oppressors, as opponents of female emancipation. In fact, the doctors often pointed out social factors and unequal circumstances of childhood and adolescence for girls and boys. In early twentieth-century, the scientific opinion of girls changed. Even though gendered notions of children and youths persisted all through the period studied, more and more some doctors, Karolina Widerström, for example, began to question them. The new girl was not weak and ill, but rather healthy and active. However, a dividing line between those who claimed the weakness of girls and those who emphasized the new, healthy girl became more evident after 1900. In this thesis, this disparity is discussed in terms of popular medical discourse and scientific medi-cal discourse. In the latter, girls were still described as more sensitive and more frail than boys and as unfit for higher education and strenuous schoolwork. Thus, the new girl – vivid, healthy and equal to the boy – was above all a con-struction in popular medicine. The uniform medical discourse on girls from the late nineteenth-century thus dissolved. A number of changes in the medical discourse on sickness and health of girls and boys during in this period occurred. First, concepts of sickness and health were modified over time and fewer schoolchildren were considered sick. Fi-nally, in the beginning of the period studied, girls were sicker than boys were, but in the end, in the 1930s, there was no obvious gender difference. Both sexes seemed equally sick (or healthy).

Xylella fastidiosa é uma bactéria gram-negativa, não flagelada, agente causal de doenças de importância econômica como a doença de Pierce nas videiras e a clorose variegada dos citros (CVC) nas laranjeiras. O objetivo do presente trabalho foi realizar análises in silico das sequências promotoras dos genes deste fitopatógeno em uma tentativa de arrecadar novas evidências para o melhor entendimento da dinâmica de regulação transcricional de seus genes, incluindo aqueles envolvidos em mecanismos de patogenicidade e virulência. Para tanto, duas estratégias foram utilizadas para predição de elementos cis-regulatórios em regiões promotoras do genoma da cepa referência 9a5c, comprovadamente associada à CVC. A primeira, conhecida como phylogenetic footprinting, foi empregada para identificação de elementos regulatórios conservados em promotores de unidades transcricionais ortólogas, levando em consideração o conjunto de genes de X. fastidiosa e 7 espécies comparativas. O critério para identificação de unidades transcricionais ortólogas, isto é, unidades trancricionais oriundas de espécies distintas e cujos promotores compartilham elementos cis-regulatórios, foi paralelamente estudado utilizando-se informações regulatórias das bactérias modelos: Pseudomonas aeruginosa, Bacillus subtilis e Escherichia coli. Os resultados obtidos com análise de phylogenetic footprinting nos permitiu acessar a rede regulatória transcricional da espécie de forma compreensiva (global). Foram estabelecidas 2990 interações regulatórias, compreendendo 80 motivos distribuídos nos promotores de 56.8% das unidades transcricionais do genoma de X. fastidiosa. Na segunda estratégia recuperamos informações regulatórias experimentalmente validadas em E. coli e complementamos o conhecimento de dez regulons de X. fastidiosa, através de uma metodologia de scanning (varredura), dos quais algumas interações regulatórias já haviam sido previamente descritas por outros trabalhos. Destacamos os regulons de Fur e CRP, reguladores transcricionais globais, que se mostraram responsáveis pela modulação de genes relacionados a mecanismos de invasão e colonização do hospedeiro vegetal entre outros. Por fim, análises comparativas em regiões regulatórias correspondentes entre cepas foram realizadas e diferenças possivelmente associadas a particularidades fenotípicas foram identificadas entre 9a5c e J1a12, um isolado de citros não virulento, e 9a5c e Temecula1, um isolado de videira causador da doença de Pierce. / Xylella fastidiosa is a gram-negative, non-flagellated bacterium responsible for causing economically important diseases such as Pierce\'s disease in grapevines and Citrus Variegated Clorosis (CVC) in sweet orange trees. In the present work we performed in silico analysis on promoter sequences of protein-coding genes from this phytopathogen, including those involved in virulence and pathogenic mechanisms, in an attempt to better understand the underlying transcriptional regulatory dynamics. Two strategies for cis-regulatory elements prediction were applied on promoter sequences from 9a5c strain genome, a proven causal agent of CVC. The first one, known as phylogenetic footprinting, involved the prediction of regulatory motifs conserved on promoter sequences of orthologous transcription units from X. fastidiosa and a set of 7 comparatives species. The criteria to identify orthologous transcription units, i. e., those from different species and whose promoter sequences share at least one common regulatory motif, was studied based on regulatory information available for model organisms: Pseudomonas aeruginosa, Bacillus subtilis and Escherichia coli. The results obtained with the phylogenetic footprinting analysis permitted us to access the underlying transcriptional regulatory network from the species in a comprehensive manner (genome-wide), with a total of 2990 regulatory interactions corresponding to 80 predicted motifs distributed on promoter sequences of 56.8% of all transcription units. In the second strategy regulatory information from E. coli was recovered and used to expand the knowledge of ten regulons in X. fastidiosa, through a scanning process, of which some regulatory interactions were previously described by independent studies. We emphasize some genes related to host invasion and colonization present in the Fur and CRP regulons, two global transcription regulators. Lastly, comparative analysis on corresponding regulatory regions among strains were performed and differences possibly associated to phenotypic variation were identified between 9a5c and J1a12, a non-virulent strain isolated from orange trees, and between 9a5c and Temecula1, a strain associated to Pierce\'s disease on grapevines.

Xylella fastidiosa é uma bactéria gram-negativa, não flagelada, agente causal de doenças de importância econômica como a doença de Pierce nas videiras e a clorose variegada dos citros (CVC) nas laranjeiras. O objetivo do presente trabalho foi realizar análises in silico das sequências promotoras dos genes deste fitopatógeno em uma tentativa de arrecadar novas evidências para o melhor entendimento da dinâmica de regulação transcricional de seus genes, incluindo aqueles envolvidos em mecanismos de patogenicidade e virulência. Para tanto, duas estratégias foram utilizadas para predição de elementos cis-regulatórios em regiões promotoras do genoma da cepa referência 9a5c, comprovadamente associada à CVC. A primeira, conhecida como phylogenetic footprinting, foi empregada para identificação de elementos regulatórios conservados em promotores de unidades transcricionais ortólogas, levando em consideração o conjunto de genes de X. fastidiosa e 7 espécies comparativas. O critério para identificação de unidades transcricionais ortólogas, isto é, unidades trancricionais oriundas de espécies distintas e cujos promotores compartilham elementos cis-regulatórios, foi paralelamente estudado utilizando-se informações regulatórias das bactérias modelos: Pseudomonas aeruginosa, Bacillus subtilis e Escherichia coli. Os resultados obtidos com análise de phylogenetic footprinting nos permitiu acessar a rede regulatória transcricional da espécie de forma compreensiva (global). Foram estabelecidas 2990 interações regulatórias, compreendendo 80 motivos distribuídos nos promotores de 56.8% das unidades transcricionais do genoma de X. fastidiosa. Na segunda estratégia recuperamos informações regulatórias experimentalmente validadas em E. coli e complementamos o conhecimento de dez regulons de X. fastidiosa, através de uma metodologia de scanning (varredura), dos quais algumas interações regulatórias já haviam sido previamente descritas por outros trabalhos. Destacamos os regulons de Fur e CRP, reguladores transcricionais globais, que se mostraram responsáveis pela modulação de genes relacionados a mecanismos de invasão e colonização do hospedeiro vegetal entre outros. Por fim, análises comparativas em regiões regulatórias correspondentes entre cepas foram realizadas e diferenças possivelmente associadas a particularidades fenotípicas foram identificadas entre 9a5c e J1a12, um isolado de citros não virulento, e 9a5c e Temecula1, um isolado de videira causador da doença de Pierce. / Xylella fastidiosa is a gram-negative, non-flagellated bacterium responsible for causing economically important diseases such as Pierce\'s disease in grapevines and Citrus Variegated Clorosis (CVC) in sweet orange trees. In the present work we performed in silico analysis on promoter sequences of protein-coding genes from this phytopathogen, including those involved in virulence and pathogenic mechanisms, in an attempt to better understand the underlying transcriptional regulatory dynamics. Two strategies for cis-regulatory elements prediction were applied on promoter sequences from 9a5c strain genome, a proven causal agent of CVC. The first one, known as phylogenetic footprinting, involved the prediction of regulatory motifs conserved on promoter sequences of orthologous transcription units from X. fastidiosa and a set of 7 comparatives species. The criteria to identify orthologous transcription units, i. e., those from different species and whose promoter sequences share at least one common regulatory motif, was studied based on regulatory information available for model organisms: Pseudomonas aeruginosa, Bacillus subtilis and Escherichia coli. The results obtained with the phylogenetic footprinting analysis permitted us to access the underlying transcriptional regulatory network from the species in a comprehensive manner (genome-wide), with a total of 2990 regulatory interactions corresponding to 80 predicted motifs distributed on promoter sequences of 56.8% of all transcription units. In the second strategy regulatory information from E. coli was recovered and used to expand the knowledge of ten regulons in X. fastidiosa, through a scanning process, of which some regulatory interactions were previously described by independent studies. We emphasize some genes related to host invasion and colonization present in the Fur and CRP regulons, two global transcription regulators. Lastly, comparative analysis on corresponding regulatory regions among strains were performed and differences possibly associated to phenotypic variation were identified between 9a5c and J1a12, a non-virulent strain isolated from orange trees, and between 9a5c and Temecula1, a strain associated to Pierce\'s disease on grapevines.