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Study of the pathophysiological role of nitric oxide on the amyloid-induced toxicity attending to the biochemical modifications and cellular damagesGuix Ràfols, Francesc Xavier 22 January 2009 (has links)
Aquesta tesi demostra que el peroxinitrit produït com a conseqüència del pèptid beta-amiloide (A) contribueix l'augment de la relació A42/A40 que ocorre a la malaltia d'Alzheimer. L'A42 contribueix a l'aparició de la malaltia degut a la seva major toxicitat (quan es compara amb l'A40) que resulta d'una gran estabilitat i capacitat agregativa. A més el peroxinitrit incrementa la toxicitat d'aquest degut a què potencia la seva agregació en forma d'oligomers altament tòxics. De fet els oligomers formats de nitro-A42 presenten una major toxicitat que aquells formats de A42 . En conjunt aquest resultats senyalen l'important paper que l'A42 té en la malaltia d'Alzheimer. Per altra banda, des de la identificació dels agregats d'A i la subseqüent formació dels cabdells neurofibrilars (NFT) com a els dos trets distintius de la malaltia, un gran esforç s'ha dedicat a establir els mecanismes moleculars que uneixen ambdós processos. Aquesta tesi demostra que el peroxinitrit format a partir de l'agregació de d'Ai la conseqüent nitrotirosinació de proteïnes, potencia l'agregació de la proteïna tau en forma de fibres. D'aquesta forma, la nitrotirosinació de la proteïna triosafosfat isomerasa (TPI) podria ser el vincle entre la toxicitat derivada del agregats d'Ai la patologia derivada de la proteïna tau. Per tant, la nitrotirosinació de la TPI podria explicar la progressió temporal que ocorre als cervells de pacients amb la malaltia d'Alzheimer des de la toxicitat induïda per l'Ai l'aparició dels NFT. Els resultats presentats en aquesta tesi podrien obrir nous aspectes en la recerca de la malaltia d'Alzheimer així com en altres malalties que cursin amb estrès oxidatiu i plegament erroni de proteïnes. / This thesis demonstrates that amyloid ß-peptide (Aß)-induced peroxynitrite contributes to the switch of the Aβ42/Aβ40 ratio that occurs in Alzheimer's disease (AD). Since Aβ42 is more toxic due to its higher aggregation and stability, it contributes to the trigger of the disease. In addition the aggregation of Aβ42 in form of the highly toxic oligomers is incremented by the presence of peroxynitrite. Moreover, these nitro-Aß42 oligomers are more toxic than those non-nitrated. All these results support the important role of peroxynitrite in AD etiology. Furthermore, since the identification of Aß accumulation and the subsequent formation of neurofibrillary tangles (NFT) as the two defining pathological hallmarks of AD, a fair amount of research on AD has been driven by the need to find the molecular mechanism linking Aß and NFT. This thesis shows the Aß-induced peroxynitrite, and the consequent nitrotyrosination of proteins, promotes tau fibrillization. Thus triosephosphate isomerase (TPI) nitrotyrosination could be the link between Aß-induced toxicity and tau pathology. Therefore, TPI nitrotyrosination may explain the temporal progression from Aß toxicity to NFT formation in AD brain. The work presented in this thesis could open a novel angle in the research of the pathophysiology of AD and could also have an impact to the research in other neurodegenerative diseases involving oxidative stress and protein misfolding.
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Development of polymer based composite filaments for 3D printingÅkerlund, Elin January 2019 (has links)
The relatively new and still growing field of 3D-printing has opened up the possibilities to manufacture patient-specific medical devices with high geometrical accuracy in a precise and quick manner. Additionally, biocompatible materials are a demand for all medical applications while biodegradability is of importance when developing scaffolds for tissue growth for instance. With respect to this, this project consisted of developing biocompatible and bioresorbable polymer blend and composite filaments, for fused deposition modeling (FDM) printing. Poly(lactic acid) (PLA) and polycaprolactone (PCL) were used as supporting polymer matrix while hydroxyapatite (HA), a calcium phosphate with similar chemical composition to the mineral phase of human bone, was added to the composites to enhance the biological activity. PLA and PCL content was varied between 90–70 wt% and 10-30 wt%, respectively, while the HA content was 15 wt% in all composites. All materials were characterized in terms of mechanical properties, thermal stability, chemical composition and morphology. An accelerated degradation study of the materials was also executed in order to investigate the degradation behavior as well as the impact of the degradation on the above mentioned properties. The results showed that all processed materials exhibited higher mechanical properties compared to the human trabecular bone, even after degradation with a mass loss of around 30% for the polymer blends and 60% for the composites. It was also apparent that the mineral accelerated the polymer degradation significantly, which can be advantageous for injuries with faster healing time, requiring only support for a shorter time period.
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Étude des voies de signalisation en aval du récepteur FFA1/GPR40 dans la cellule bêta pancréatiqueBergeron, Valérie 04 1900 (has links)
No description available.
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Procedurálně generované město / Procedurally Generated CityPanáček, Petr January 2011 (has links)
This paper deals with problem of procedurally generated city. There are described steps of creation of city. These steps are: road generation, extraction of minimal cycles in graph, division of lots and generation of buildings. Road and buildings are generated by L-system. Our system generate a city from input images, such as height map, map of population density and map of water areas. Proposed approaches are used for implementation of application for generation of city.
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FILAMENT GENERATED DROPLETS DURING DROP BREAKUP, SHEET RUPTURE, AND DROP IMPACTXiao Liu (15339289) 24 April 2023 (has links)
<p>Free surface flows, characterized by a deformable interface between two immiscible fluids or between a liquid and a gas, play a pivotal role in numerous natural phenomena and industrial processes. The fluid-fluid interface dynamics, governed by the complex interplay of forces such as inertia, capillary force, viscous force, and possibly elastic force, significantly influence the behavior of the fluids involved. Examples of free surface flows can be observed in everyday situations, such as droplet formation from a faucet, propagation and breaking of ocean waves, and tear films that coat the eye. An in-depth understanding of free surface flows and fluid-fluid interface dynamics has extensive implications for optimizing applications like inkjet printing, coating, spraying, and droplet formation while providing insights into the intricate behavior of natural fluid systems. Most of these applications, except for coating, involve abrupt and catastrophic topological changes of interfaces present in processes such as drop breakup, sheet rupture, and drop impact, where small droplets form from liquid sheets or filaments.</p>
<p>This thesis examines the dynamics of contracting liquid filaments through computational means. Previous computational simulations have assumed that initially the fluid within the filament is quiescent which, however, may not typically be the case in practical applications. Here, the effect of a realistic, non-zero initial velocity profile is considered with the hypothesis that the fact that the fluid is already in motion when it starts to contract may result in significant alterations in the filament’s final fate vis-a-vis whether it breaks up into multiple small droplets or contracts into a sphere as its ends retract toward each other. The transient system of governing equations, the three-dimensional but axisymmetric (3DA) Navier-Stokes and continuity equations subjected to interfacial boundary conditions, are solved using rigorous and robust numerical algorithms in both fully 3DA and one-dimensional (1D) settings using the Galerkin finite element (GFEM) method. The simulation results are then used to construct comprehensive phase diagrams to delineate regions where filaments break up into smaller droplets from those where filaments contract to spheres without breakup.</p>
<p>Polymer additives are often present in practical applications involving filament contraction and breakup. The presence of polymer molecules in an otherwise Newtonian solvent gives rise to non-Newtonian rheology. In this thesis, the dynamics of filaments containing polymer additives are analyzed using a 1D algorithm that is developed specifically for simulating viscoelastic free surface flows where the fluid’s rheology is described by the oft-used Oldroyd-B model. In real-world applications, filaments produced from nozzles are expected to be prestressed at the instant when they are created and begin to contract. It is demonstrated that the retraction velocity of tips of highly viscous, prestressed filaments is significantly increased compared to filaments in which the polymer molecules are initially relaxed and Newtonian filaments. This enhancement is explained by examining the value of f σ: D (σ: Elastic stress; D: Rate-of-strain tensor), which can be positive or negative. This quantity is positive when the flow does work on the polymer molecules but negative when the molecules do work on the flow, i.e., when elastic recoiling or unloading takes place. In prestressed filaments, elastic unloading takes place because σ: D < 0. The elastic stresses work by pulling the fluid in axially and pushing it out radially, thereby drastically increasing the tip velocity. However, this enhancement in contraction velocity is not observed in low to intermediate viscosity prestressed filaments and whose Newtonian counterparts typically experience end-pinching. It has been established by others that end-pinching can be precluded in either filaments of intermediate viscosity or surfactant-laden filaments of low viscosity through a process known as escape from end-pinching. In this study, we demonstrate that a similar escape can also occur in prestressed viscoelastic filaments of low-to-intermediate viscosity, as revealed by one-dimensional numerical simulations and rationalized by examining when and where the elastic recoil takes place.</p>
<p>Beyond cylindrical filaments, thin liquid films or planar liquid sheets are also prevalent in atomization, curtain coating, and other processes where liquid sheet stability has been a subject of extensive research. Numerous authors have examined wave formation and growth leading to sheet breakup. Free liquid films or sheets without edges or caps at their two ends, which typically have two free surfaces and are surrounded by air or sometimes another liquid, can destabilize and rupture due to intermolecular van der Waals attractive forces, despite the stabilizing influence of surface tension. In this thesis, the dynamics of contracting free films or sheets with caps---two-dimensional (2D) drops---of Newtonian fluids is examined without considering van der Waals forces to confirm or refute the hypothesis that such systems can rupture due to finite-amplitude perturbations even in the absence of intermolecular forces. In particular, both two-dimensional and one-dimensional high-accuracy simulations are employed to demonstrate that unlike inviscid 2D drops that can rupture in the absence of van der Waals forces, 2D drops or sheets can escape from pinch-off due to the action of viscous forces which are present in real systems no matter how small their viscosity. The reopening of the interface and escape from pinch-off in 2D drops and sheets are explained by demonstrating the key role played by vorticity. New power-law relations or scaling laws are obtained as a function of Ohnesorge number (ratio of viscous to the square root of the product of inertial and capillary forces) for the value of the minimum film thickness for which 2D drops or sheets stop thinning and after which the interface begins to reopen. Simple yet powerful arguments are presented rationalizing these scaling laws. It is expected that these power-law relations should be of great interest to experimentalists who study such phenomena by high-speed visualization experiments.</p>
<p>Some of the motivation for this thesis research comes from crop spraying applications in which achieving zero or negligible drift is highly desirable. To further the understanding of fluid mechanics underpinning current and future drift reduction technologies, a simplified experimental setup is adopted to generate liquid sheets and analyze their disintegration into droplets. This new setup is both simpler and more universal than commonly utilized experimental systems that use single or multiple nozzles to generate liquid sheets and spray droplets from the disintegration of free liquid films. In the current experiments, droplets of test fluids are made to collide with or impact the top planar surface of a solid cylinder or rod. A series of MATLAB codes are developed and employed to extract droplet size distributions from images that are obtained from high-speed visualization experiments. The experimental setup and the means of data analysis are then used to probe the effect of fluid properties on the dynamics of sheet disintegration and droplet size distributions. It is hoped that future researchers will be able to combine what has been done in this thesis by simulations and in this chapter via experimental observations to develop an improved mechanistic understanding of spray formation.</p>
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Mecanismes de regulació en l'activitat biològica del factor de transcripció SnailDomínguez Solà, David 03 April 2003 (has links)
Els factors de transcripció de la família Snail són fonamentals en la "transició epiteli-mesènquima", procés morfogènic essencial en el desenvolupament embrionari i en els fenòmens metastàsics tumorals.En els mamífers l'activitat d'Snail és modulada per dos mecanismes. (i) En el promotor humà es troben regions definides de resposta a factors repressors, predominants en les cèl·lules epitelials, i elements diferenciats de resposta a inductors de la "transició epiteli-mesènquima". (ii) L'activitat d'Snail és condicionada també per la seva localització subcel·lular, modulada per mecanismes no transcripcionals: la fosforilació d'Snail determina si és o no exclós del nucli. Al citosol no pot actuar com a repressor transcripcional però pot interaccionar amb la xarxa microtubular, que estabilitza i en condiciona el dinamisme. Això coincideix amb l'activació de la GTPasa RhoA i la reorientació dels filaments de vimentina, fets associats a l'adquisició de capacitat migratòria. L'efecte com a repressor transcripcional i la modulació del dinamisme microtubular són possiblement esdeveniments coordinats necessaris per al rol biològic d'Snail en mamífers. / Snail family of transcription factors is fundamental to the "epithelial-mesenchymal transition", morphogenic process essential to embryonic development and metastatic phenomena in tumors.Snail's activity is modulated in two ways in mammals. (i) The human promoter harbors definite regions that respond to repressor factors, which prevail in epithelial cells; and differentiated elements that respond to known inducers of the "epithelial-mesenchymal transition". (ii) Snail's activity is also conditioned by its subcellular localization, mechanism not dependent on its transcriptional control: Snail phosphorylation determines whether Snail is excluded or not from the nucleus. When in the cytosol, Snail is unable to act as a transcriptional repressor, but however binds to the microtubular meshwork, which becomes stabilized and whose dynamism is conditioned as a result. This fact coincides with the activation of the RhoA GTPase and reorientation of vimentin filaments, both phenomena being related to the acquisition of cell motility. The transcriptional repressor and the microtubule dynamics effects are probably two coordinated events necessary to Snail's biological role in mammals.
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