In dieser Arbeit wurden die beiden Membranen Schweinekornea und Rindernasenmukosa hinsichtlich ihrer Permeabilität für den lipophilen Arzneistoff Androstendion (AD), der sowohl zur ophthalmologischen Anwendung als auch für die nasale Applikation mit systemischer Wirkung von Interesse ist, verglichen. Zusätzlich wurden identische Versuche mit der synthetischen Membran, Nephrophan(r), durchgeführt. Neben der gepufferten Arzneistofflösung, für die aufgrund des differenzierten Membranaufbaus Permeationskoeffizienten (Peff) für AD im Verhältnis von 3:1:4 (Mukosa : Kornea : Nephrophan(r)) resultierten, standen zwei entwickelte wasserkontinuierliche, nicht-ionische Mikroemulsionen (ME) und ihre Einzelkomponenten als Trägerformulierungen bei den Permeationsstudien im Vordergrund. Darüber hinaus wurde ein ME-System mit einem kationischen Kotensid entwickelt, charakterisiert und in die Untersuchungen einbezogen. Die getesteten Trägerformulierungen führten an den einzelnen Membranen zu unterschiedlichen Ergebnissen. Um auch den "hydrophilen Permeationsweg" einzuschließen, wurde parallel Fluorescein-Na (FSC) als hydrophile Modellsubstanz getestet. Als mögliche Ursache für diese differenzierten Ergebnisse wurde ein Einfluss der Additiva und Formulierungen auf das Verteilungsverhalten des lipophilen AD zwischen Donatorlösung und Membran in Betracht gezogen und daher in einem weiteren Versuchsblock die Penetrationsrate untersucht. Darüber hinaus wurde parallel dazu der metabolische Abbau, den AD während des Membrandurchtritts durch die vorhandenen Enzyme erfahren kann, berücksichtigt. Die Resultate zeigten Übereinstimmung mit den Permeationsergebnissen indem die Additiva und Formulierungen die Penetration in das Gewebe und den Metabolismus mehr oder weniger herabsetzten. Zur Charakterisierung der systemischen Verfügbarkeit von AD nach nasaler Applikation wurden im Anschluss an die Permeations- und Penetrationsversuche In-vivo-Studien an Kaninchen durchgeführt, die hier allerdings lediglich mit orientierendem Charakter einbezogen werden konnten. Um schließlich die Verhältnisse am Auge bzw. den mehrschichtigen Tränenfilm hinsichtlich einer Applikation der ME-Systeme modellhaft zu simulieren, wurden biophysikalische Untersuchungen in einem Langmuir-Trog mit Meibom''schen Drüsensekret als Oberflächenfilm durchgeführt, die über mögliche Interaktionen der Formulierungen bzw. ihrer Bestandteile mit der Tränenlipidschicht des Auges Auskunft geben sollten. Hier zeigten sich günstige Einflüsse der ME auf die Tränenlipidschicht, die vor allem bei einer Anwendung der ME bei Trockenem Auge von Vorteil sein können. / In these studies in vitro permeability of porcine cornea and bovine nasal mucosa was investigated and compared to each other using the lipophilic drug androstenedione (AD), which is of interest for ocular use as well as nasal, systemical administration. Additionally, the artificial membrane, Nephrophan(r), was used for identical investigations. Because of the differentiated membrane structure AD-permeation behaviour out of buffer solution resulted in a ratio of permeability coefficients (Peff) of 3:1:4 (nasal mucosa : cornea : Nephrophan(r)). Furthermore, two water-continuous, non-ionic microemulsions (ME) and their isolated components were investigated as carrier formulations. Additionally, a new ME containing a cationic co-surfactant was developed, characterized and included in the permeability studies as well. Permeation out of these carrier formulations also resulted in different Peff in case of all tissues. For including studies of the hydrophilic transport way flourescein-sodium (FSC) was investigated as well representing a hydrophilic model substance. Influence of the additives and formulations on the partition behaviour of AD between membrane and donor solution was considered to partially cause these results. Therefore, penetration of AD was investigated together with the metabolic conversion of AD caused by enzymes located in the biological membranes. The additives and formulations decreased penetration into the tissue as well as metabolism of the drug. These findings corresponded with and could therefore explain the results of the permeability studies to some extend. For characterizing systemical availability of AD after nasal administration and improving the results of the permeability and penetration investigations in vivo studies using rabbits were carried out. However, these studies could give but marginal information and therefore be incorporated for orientation only. Furthermore, biophysical investigations were carried out using a Langmuir trough with Meibomian gland secrete (MGS) as the surface layer in order to simulate the multiple layer tear film. These studies were supposed to give some information about interactions between the ME or their isolated components, respectively, and the lipid layer of the tear film, regarding ocular administration of these formulations. The results showed suitable influence of the ME on the MGS, which can especially be advantageous for a use in Dry eye syndrome.

Les particules d’aérosol sont une composante essentielle de l’atmosphère, et cette importance s’amplifie lors d’une éventuelle libération dans l’atmosphère de matières radioactives sous forme particulaire. En effet, pour améliorer la connaissance autour de la contamination des sols consécutive à une émission de particules, il est important d’étudier le rabattement des particules par la pluie sous le nuage. Dans ce but, des expériences sont menées à l’échelle microphysique (expérience BERGAME) pour quantifier l’efficacité des gouttes de pluie à collecter les particules. Ceci permet au final d’améliorer la modélisation du lessivage des aérosols atmosphériques par la pluie à méso-échelle. Le modèle utilisé est DESCAM qui décrit de manière détaillée les distributions granulométriques en masse et en nombre des particules pour chaque type d’aérosol et des hydrométéores et calcule leur évolution due aux processus microphysiques nuageux. L’expérience BERGAME a été dimensionnée et construite pour mesurer l’efficacité de collecte car les mesures de ce paramètre se sont avérées en désaccord avec les modèles classiques de la littérature pour les gouttes de pluie d’un diamètre supérieur au millimètre. Un montage optique a été imaginé pour tenter de comprendre quels mécanismes de collecte sont négligés dans les modèles standards. Un nouveau modèle d’efficacité de collecte pour les gouttes d’un diamètre de 2 mm est alors proposé prenant en compte pour les grosses gouttes une recirculation turbulente dans le sillage de la goutte capable d’augmenter de façon importante la capture des petites particules. Les nouvelles efficacités de collecte ainsi mesurées et paramétrées sont ajoutées au modèle de nuage DESCAM. Des modifications significatives sur la modélisation du lessivage par DESCAM sont observées, ouvrant ainsi la voie à une amélioration de la modélisation de la contamination des sols par les modèles de dispersion atmosphérique. / Aerosol particles are an important component of the atmosphere and are of great concern in the case of an accidental release of radioactive particles. To better understand ground contamination due to a particle release in the vicinity of an accident, it is important to study the particle scavenging associated with rain. To achieve this objective during this thesis, an experiment at the microphysical scale (BERGAME experiment) was developed and the modelling of the washout was improved at mesoscale. The model used was DESCAM : a microphysics model that describes the bin size distributions for aerosol particles and hydrometeors and calculates their evolution due to microphysical cloud processes. The BERGAME experiment was designed and built to measure the collection efficiencies which disagree with theoretical calculation. Using an optical method, it was shown that those discrepancies were due to rear capture. A new model of collection efficiencies for the 2 mm drops was proposed that takes into account for big raindrops the turbulent circulation occurring downstream increasing significantly the capture of small particles. The corrected collection efficiencies were implemented in the DESCAM model. By this way, significant modifications of the modelling were observed and studied. This is an important step toward an accurate modelling of the ground contamination in atmospheric dispersion models.

Les fonctions organiques du corps humain sont liées à des constants biologiques. Variations de ces constantes induisent divers états pathologiques. Parmi ces constantes, le pH constitue le cœur de ces travaux de thèse. Chez les êtres vivants, les fonctions biologiques dépendent de constant acides ou alcalines. En fait, l’action d’une protéine dépend du pH du milieu environnant. Une valeur inadéquate du pH rend les protéines inactives ce qui est délétère pour l’organisme. Il existe donc un besoin pour des capteurs de pH qui puissant être utilisés dans le corps humain pour des applications cliniques (échelle macroscopique), sur des cellules en culture pour des recherches en biologie (échelle mesoscopique) et pour étudier les échanges ioniques au niveau des membranes cellulaires pour des travaux plus fondamentaux (échelle microscopique). Parmi le large éventail de technologies potentiellement candidates pour ces applications, la mesure de pH par fibre optique exploitant la fluorescence permet d’être adaptée aux trois échelles dimensionnelles susnommées. Ce manuscrit de thèse adresse des contraintes par l’étude de capteurs fluorescents à fibre optique utilisant deux types d’indicateur de pH: les SNARF et la fluorescéine. En parallèle de ces développements expérimentaux, des descriptions mathématiques des propriétés de fluorescence de ces deux indicateurs sont proposées. Ces descriptions permettent de progresser vers une mesure du pH sans calibration / Organic functions of the human body are linked to biological constants. Variations of these constants induce pathological troubles. Among these constants, the pH is the central subject of this PhD work. In living beings, biological functions are related to either acid or alkaline constants. Indeed, the action of a protein depends on the surrounding pH. An inadequate value of the pH makes the proteins non active which is deleterious for the organism. There exist a need for pH sensors which can be used in the human body for clinical applications (macroscopic scale), on cells in culture for biology researches (mesoscopic scale) or at a cell membrane level for more fundamental studies (microscopic scale). Among the wide range of technologies potentially useful for these applications, fiber optic fluorescence pH sensing offers the possibility to be adapted to the three above mentioned dimensional scales. This PhD dissertation addresses these constraints by studying fluorescence fiber optics pH sensors using two kind of pH indicators: SNARF and fluorescein. Together with these experimental studies, mathematical descriptions of the fluorescence properties of these indicators are proposed. They allow progressing towards calibration free pH sensing.

The retina is a highly metabolically active tissue with large demands on the supply of nutrients. Disorders affecting the retina often include some vasculopathy with an impact on retinal circulation. Studies of retinal haemodynamics could thus help to detect, differentiate and diagnose diseases, to monitor changes in disease as well as progression and efficiency of the therapy. The present studies were an attempt to validate and determine the clinical usefulness of a newly developed technique for studying the retinal circulation in human eyes. We used different techniques to evaluate different parameters of retinal circulation. We examined how leukocyte velocity determined with Blue Field Simulation and transit times, mean transite time (MTT) and arterio-venous passage (AVP), and vessel diameter, determined from fluorescein angiograms, together reflects the retinal circulation. MTT was determined with a method based on an Impulse-Response technique, MTTIR. In a study on monkeys we compared our method, together with two conventional methods, with an absolute measurement of retinal blood flow (RBF) determined with labelled microspheres. There was a weak, but not statistically significant, correlation between retinal blood flow and MTTIR (r2 = -0.60, p = 0.06), but no useful correlation between retinal blood flow and either of the other two measures of transit times. In a study on healthy eyes we determined the effect of a physiological provocation, changes in arterial blood gases, on retinal circulation. Breathing pure oxygen or increased level of carbon dioxide in inspired air had no effect on MTT, but oxygen reduced leukocyte velocity and vessel diameter and carbon dioxide increased leukocyte velocity significantly. We concluded that unchanged transit time trough the retinal tissue was not due to a lack of effect of the gas provocation but a result due to concomitant changes in volume and flow. In a study on eyes of patients with diabetic retinopathy we investigated the relation between the extent of retinal circulation changes and the severity of the diabetes retinopathy (DRP). Transit times were relatively unaffected until proliferative DRP (PDRP) developed. In eyes with PDRP both MTTIR and AVP were increased. After panretinal photocoagulation treatment MTTIR returned to normal levels and vessel diameters tended to decrease while leukocyte velocity and AVP remained unchanged. We concluded that the increase in MTTIR in eyes with PDRP is at least partly explained by vessel dilation, causing an increased volume of the retinal vascular bed.

This study focuses on preparing surface enhanced fluorescence (SEF) substrates for use in the enhancement of the emission signal of rhodamine B and fluorescein dyes. Fluorescence spectroscopy has been widely utilized owing to its high sensitivity. SEF is a process where the interactions of fluorophores with the localized surface plasmons of metal nanoparticles results in fluorescence enhancement, increased photostability and rates of system radiative decay which leads to a decreased lifetime. One of the most important factors of SEF studies is to provide a uniform distance between fluorophore and metal nanoparticle in a controlled manner / otherwise, F&ouml / rster resonance energy transfer takes place from fluorophore to metal nanoparticle and emission intensity of fluorophore is quenched. The spherical gold and silver nanoparticles were prepared using the well known and straightforward chemical reduction method, in which sodium citrate acted both as a reducing agent and a stabilizer around the formed nanoparticles. Silver and gold were chosen because of their high plasmon field enhancement. Since plasmon field strongly depends on the shape and size of the nanoparticles, the prepared nanoparticles were characterized using absorption spectroscopy and field emission scanning electron microscopy (FE-SEM). Prior to deposition of silver or gold nanoparticles on glass slides, the slides were derivatized by immersing them into an aqueous solution of 3-Aminopropylethoxysilane (APTES). Following derivatization, silver or gold nanoparticles were deposited by immersing the slides into the colloid mixture. Metal nanoparticle coated slides were characterized using absorption spectroscopy and field emission scanning electron microscopy (FE-SEM). Surface enhanced Raman scattering (SERS) measurements were carried out to observe the plasmon efficiency of the deposited nanoparticles. The SERS measurements were repeated for the duration of two weeks in order to check the stability of the plasmon efficiency. In this study, different types of materials (silica, zinc oxide, gold, stearic acid.) were employed as spacers to observe their effects on fluorescence enhancement. Physical vapor deposition (PVD) and Langmuir-Blodgett (LB) film deposition techniques were used for the formation of the spacer within the substrate. Fluorescence enhancement of rhodamine B and fluorescein was observed on the prepared SEF substrates. Obtained enhancement factors indicate that SEF substrates have the potential for sensitivity improvements of fluorescence sensing in many fields.

A number of novel isoindoline nitroxides have been synthesised using a variety of synthetic techniques. Several carbon-carbon bond forming methodologies, including the first examples of Heck and Sonogashira coupling applied to the isoindoline nitroxide class, were utilised to give novel robust aromatic frameworks. Palladium-catalysed Heck coupling of brominated nitroxides and ester-substituted olefins generates novel nitroxides possessing extended conjugation. Hydrolysis of the nitroxide esters gave the corresponding carboxylic acids, which showed enhanced water solubility. Sonogashira coupling of an iodo-isoindoline nitroxide gave several novel alkynesubstituted nitroxides in high yield. Subsequent coupling of a deprotected ethynyl nitroxide with aromatic iodides gave acetylene-linked nitroxides and an acetylene linked nitroxide dimer. A butadiyne linked dinitroxide was successfully synthesised via Eglinton oxidative coupling of two ethynyl nitroxides. The synthesis of a novel water-soluble dicarboxy nitroxide was achieved by base hydrolysis of a dinitrile. Functional group interconversion furnished anhydride and imide substituted nitroxides from the diacid. Subjecting the imide to the Hofmann rearrangement gave an unexpected brominated amino-carboxy nitroxide. The dicarboxy nitroxide and the brominated amino-carboxy nitroxide were both shown to have a protective effect on Ataxia-Telangiectasia cells, indicating a possible role as antioxidants in the treatment of this disease. A fluorescein nitroxide was successfully synthesised through the condensation of the anhydride substituted nitroxide and resorcinol. After limited success using a variety of other techniques, Buchwald-Hartwig amination was able to furnish a rhodamine nitroxide, via a triflate-fluorescein nitroxide. The extended aromatic nitroxides possess suppressed fluorescence and we have described these systems as profluorescent. The profluorescent nitroxides were found to have significantly lower quantum yields than the non-radical analogues and displayed a substantial increase in fluorescence intensity upon radical trapping, making them useful probes for free radical reactions.

Thesis submitted in fulfilment of the requirements for the degree Master of Technology: Biomedical Technology in the Faculty Health and Wellness Sciences at the Cape Peninsula University of Technology, 2013 / The accurate and consistent measurement of antioxidants is crucial to evaluating their biological role in the prevention and delay of cancer and other pathological conditions. Hence, the performance of the analytical method utilized should be evaluated for acceptable levels of accuracy, precision and other performance parameters according to internationally accepted standards. Additionally, the measure and influence of existing errors should be evaluated and the method optimized to reduce such errors. In furtherance of this vital aim, this research project sought out to optimize and validate two bio-analytical assays for the measurement of total antioxidant capacity and L-ascorbic acid (L-AA), respectively in food commodities. The validation procedure was performed in accordance with ISO 17025 international standard. The first study in this thesis evaluated, optimized and validated the hydrophilic oxygen radical absorbance capacity (H-ORACFL) assay using fluorescein for total antioxidant capacity in various food and beverage products. The assay demonstrated good results with regard to accuracy, precision, linearity, specificity, limits of detection (LOD) and quantification (LOQ) and robustness. The extraction solvent (60% ethanol) recovered excellent antioxidant yields for most samples tested. The optimization of the method in terms of temperature and sample usage on the micro-plate significantly (p<0.05) reduced errors and subsequently improved precision substantially.

Les processus microbiens ont une importance déterminante dans la dynamique des processus réactifs dans les eaux souterraines. La compréhension de la variabilité spatiale et temporelle de ces phénomènes, et le développement de méthodes expérimentales de terrain, ouvrent de nouveaux champs de recherches et d'applications allant de la remédiation des aquifères contaminés à la compréhension des grands cycles biogéochimiques naturels. Dans le premier volet de cette thèse nous présentons des observations de terrain permettant de comprendre le rôle des fractures sur la formation d'un ''hotspot'' d'activité microbienne en profondeur. Du fait de leur forte réactivité, ces ''hotspots'' peuvent dominer la dynamique biogéochimique des milieux souterrains, malgré leur faible extension spatiale. Nous avons ainsi analyser les conditions de formation d'un tapis microbien par des bactéries ferro-oxydantes à 60 mètres de profondeur sur l'observatoire de Ploemeur (réseau H+) alors que ces phénomènes ont été observé jusqu'à présent en surface. Les résultats de cette étude montrent que des circulations hétérogènes, liées à la structure des milieux fracturés, créent des zones mélanges entre des eaux riches en fer et des eaux oxygénées, à l'origine de ce hotspot microbien. Le deuxième volet de ce travail de thèse a été consacré au développement d'une méthode innovante pour la mesure en continu de l'activité microbienne dans les eaux souterraines. La méthode est basée sur l'utilisation de la Fluoréscéine DiAcétate (FDA) dont le produit de réaction peut être mesuré en continu par un fluorimètre de terrain. Après avoir testé et validé les protocoles sur des solutions enzymatiques et des eaux naturelles en laboratoire, nous avons mis en œuvre cette technique sur le terrain au cours d'expériences de traçages réactifs. Un modèle cinétique nous a permis d'approcher les résultats obtenus en laboratoire, et de comparer nos résultats de terrain aux calibrations effectuées in vitro. Cette méthode ouvre ainsi de nouvelles perspectives pour la caractérisation des processus biogéochimiques sur le terrain. / Microbial processes play a key role in controlling biogeochemical reactivity in groundwater. The understanding of the spatial and temporal variability of these phenomena and the development of novel experimental field methods, has opened new fields of research and applications, ranging from groundwater remediation to understanding of global biochemical cycles. In the first part of this thesis, we present field observations providing new insights on the role of fractures in the formation of a hotspot of microbial activity. Because of their large reactivity, these hotspots can dominate the biogeochemical dynamics of subsurface systems, despite their small spatial extent. We have thus analyzed the conditions for the formation of a microbial mat composed of iron-oxidizing bacteria at 60 meters depth in the Ploemeur fractured rock observatory (H+ network) while these phenomena are usually observed at the surface. These results show that heterogeneous flowpaths, linked to the structure of fractured media, create mixing zones between iron rich water and oxygen rich water, at the origin of the microbial hotspot. The second part of this work was devoted to the development of a novel method for a continuous measurement of microbial activity in groundwater. The method is based on the use of Fluorescein DiAcetate (FDA) whose product of reaction can be measured continuously by a field fluorimeter. After testing and validating protocols in the lab on enzymatic solutions and natural water, we have implemented this technic in the field in reactive tracer test experiments. A kinetic model allowed us to interpret the lab results, and to compare them to the field kinetics. This method thus opens new perspectives for the characterization of biogeochemical processes in the field.

No description available.

In this thesis, improved techniques for biomolecule analysis using capillary electrophoresis (CE) and matrix-assisted laser desorption/ionization-mass spectrometry (MALDI-MS) and hyphenations between those have been presented.A pre-concentration method which is possible to apply in both techniques, has also been investigated. In this work the off-line MS mode has been used either in the form of fractionation (Paper I) or by incorporating the MALDI target in the CE separation system (Paper II).In Paper I, a protocol for CE-MALDI analysis of cyanogen bromide digested bacteriorhodopsin (BR) peptides as model integral membrane protein peptides were established. Also, an improved protocol for partially automated manufacturing of a concentration MALDI-target plate is presented. The design of the targets was suitable for the fractions from the CE. A novel technique for the integration of CE to MALDI-MS using a closed-open-closed system is presented in Paper II, where the open part is a micro canal functioning as a MALDI target window. A protein separation was obtained and detected with MALDI-MS analysis in the micro canal. A method has been developed for detection of monosaccharides originating from hydrolysis of a single wood fiber performed in a micro channel, with an incorporated electromigration pre-concentration step preceding CE analysis in Paper III. The pre-concentration showed to be highly complex due to the fact that several parameters are included that affecting each other. In Paper IV a protocol using enzymatic digestion, MALDI-TOF-MS and CE with laser induced fluorescence (LIF) detection for the investigation of the degree of substitution of fluorescein isothiocyanate (FITC) to bovine serum albumin (BSA), as a contact allergen model system for protein-hapten binding in the skin, is presented. The intention of a further CE-MALDI hyphenation has been considered during the work. In Paper V 2,6-dihydroxyacetophenone (DHAP) was investigated, showing promising MALDI-MS matrix properties for hydrophobic proteins and peptides. 2,5-dihydroxybenzoic acid (DHB) was undoubtedly the better matrix for the hydrophilic proteins, but its performance for the larger and hydrophobic peptides was not optimal. Consequently, DHAP can be used as a compliment matrix for improved analysis of hydrophobic analytes. / QC 20101214