The first project in this dissertation presents a simplified and efficient protocol for synthesizing pyrrolines through 5-exo iminyl radical cyclizations. The microwave irradiation of O-Phenyloximes tethered to alkenes causes N-O homolysis resulting in iminyl radical generation, which subsequently undergoes 5-exo-trig cyclizations furnishing pyrrolines. This eliminates the need for toxic radical initiators (AIBN, benzoyl peroxide), propagating agents (Bu3SnH, (Me3Si)3SiH), and expensive catalysts or single-electron transfer (SET) cycles. We explored the scope of diverse traps and substrates for iminyl radical cyclizations. The iminyl radical cyclizations formed versatile pyrrolines with moderate to excellent yields. The diastereoselectivity also ranged from low to high. Moreover, these versatile pyrrolines were further transformed via various reactions, such as hydrogenation, allylation, dihydroxylation, and cross-metathesis. The second part of this project extends the scope of the non-redox iminyl-radical based approach to γ-C(sp3)−H ketone activation. The sequence of N-O homolysis triggered by microwave irradiation of O-phenyloximes, 1,5-hydrogen atom transfer (HAT), trapping of the radical intermediate, and in situ imine hydrolysis, ultimately leads to the formal γ-C–H functionalization of ketones. We achieved both C-O and C-C bond formation by using diverse O-phenyloxime substrates. This work's notable achievement was accomplishing γ-C–H activation of 1o carbon atoms, a feat that has not been attained using SET-based iminyl radical chemistry. The third part of this dissertation focuses on the influence that dehydroamino acids have on secondary structures. This project describes the synthesis of incipient 310 helical tetrapeptides containing dehydroamino acids. A bulky dehydroethylnorvaline-containing tetrapeptide was synthesized. Based on our published data, we speculated that dehydroethylnorvaline might increase peptide proteolytic stability.

The nitrate radical (NO3·) was first identified as early as the 1881, but its role in atmospheric oxidation has only been identified within recent decades. Due to its high one-electron reduction potential and its reactivity toward a diverse set of substrates, it dominates nighttime atmospheric oxidation and has since been the subject of much work. Despite this, studies on NO3· hydrogen atom transfer reactions have been somewhat neglected in favor of its more reactive oxidative pathways. The first section of the dissertation will highlight the role of substrate structure, solvent effects, and the presence of a polar transition state on NO3· hydrogen abstractions from alcohols, alkanes, and ethers. In this work the acquisition of absolute rate constants from previously unexamined substrates was analyzed alongside a curated list of common organic pollutants degraded through hydrogen atom abstraction. It was found that NO3· reacts with low selectivity through an early polarized transition state with a modest degree of charge transfer. Compared to the gas-phase, condensed-phase reactions experience rate enhancement—consistent with Kirkwood theory—as a result of the polarized transition state. These insights are then applied to abstractions by NO3· from carboxylic acids in the next section. It was found that the rate constants for abstraction of α-carbons were diminished through induction by the adjacent carbonyl compared to the activation seen for the aforementioned substrates. The deactivation of abstraction by the carbonyl was found to be dramatically reduced as the substrate's alkyl chain was lengthened and/or branched. This apparent change in mechanism coincides with hydrogen abstraction of the alkyl chain for sufficiently large carboxylic acids and rules out the possibility of concerted bond breaking elsewhere in the molecule. Finally, the dissertation will cover some additional projects related to the overall nature of the work including examination of the kinetics of radical clock systems when complexed with metal ions and the examination of a highly oxidative biosourced monomer. / Doctor of Philosophy / The nitrate radical (NO3·) was first identified as early as the 1881, but its role in the breakdown of atmospheric pollutants has only been identified within recent decades. Operating primarily at night, NO3· serves as a major atmospheric oxidant—it breaks down pollutants by reactions that involve the removal of electrons from those substrates. This chemistry is particularly important in understanding the consequences of an increasingly industrialized world and the subsequent short-term health and environmental implications. Geographically, these reactions will occur in large concentrations near locations that contribute greatly to atmospheric pollution, such as above coal-powered plants, heavily industrialized areas, above the canopy of large forests, and immediately behind the engines of airplanes as they move through the sky. The proximity of these locations to large population centers has caused the pollutants to greatly impact human health. These contaminants have been linked to several of the leading global causes of death, such as ischemic heart disease, stroke, and respiratory illnesses. The first section of the dissertation will focus on the role of pollutant structure, the medium in which the reaction occurs, and the development of a charged complex when NO3· reacts with alcohols, alkanes, and ethers. These substrates are often found as the result of incomplete combustion when burning fuel or as products of even more sustainable biodiesels. In this work the exact rate constants were found for substrates that were previously unexamined and compared with similar known reaction rates. It was found that NO3· has a low preference for what it reacts with and passes through a modestly charged complex early in the reaction. Compared to gaseous reactions, reactions in a liquid environment proceed faster due to the formation of a charged complex. This was then applied to reactions with carboxylic acids in the next section. Carboxylic acids are often found in large concentrations above the canopy of large forests resulting from the oxidation of isoprenes that are naturally released from broad-leaf trees. It was found that these reactions were slower than reactions with alkanes as the development of the charged complex was inhibited due to the presence of an adjacent dipole. When the carboxylic acid was longer and/or more branched, the formation of the charged complex was no longer inhibited as the reaction site moved further from the dipole. A change in reaction pathway was observed when the acids were sufficiently large. This ruled out the possibility of the reaction occurring simultaneously with a fracturing and rearrangement elsewhere. Finally, the dissertation will cover some additional projects that share some overlap with the work already described including the study of the rates of radical clock systems in the presence of metal ions and the study of naturally sourced monomers that are prone to losing electrons.

In dieser Arbeit wurde eine einfache laserspektroskopische Messmethode für lokale elektrische Feldstärken im Hinblick auf ihre Messmöglichkeiten und -grenzen untersucht. Als empfindliche optische Feldsensoren dienen dabei Wasserstoffatome, für die die Stark-Aufspaltung der Spektrallinien im elektrischen Feld wohl bekannt und exakt berechenbar ist. Die experimentellen Untersuchungen wurden an einer Niederdruck-Gaszelle durchgeführt, in der ein elektrisch geheizter Wolframdraht für thermische Dissoziation von Wasserstoffmolekülen sorgte. Die Wasserstoffatome wurden durch zwei gegenläufige Laserstrahlen Doppler-frei angeregt. Die Durchstimmung der schmalbandigen Laserstrahlung über den Wellenlängenbereich der Zwei-Photonen-Resonanz lieferte direkt das vom elektrischen Feld hervorgerufene Stark-Spektrum des angeregten Zustands. Weil die Methode im Gegensatz zu ähnlichen, erheblich aufwendigeren Verfahren nur die niedrigsten Wasserstoff-Energieniveaus benutzt, die mit Zwei-Photonen-Anregung direkt aus dem Grundzustand erreichbar sind, kommt sie mit einem einzigen Laser aus. Für das erste angeregte Niveau mit n = 2 wird Strahlung bei 243 nm benötigt, das nächsthöhere Niveau mit n = 3 erfordert 205 nm. Für n = 2 wurden Untersuchungen an Wasserstoff und Deuterium durchgeführt und Stark-Spektren mittels optogalvanischer Detektion gemessen. Schwerpunkt der Arbeit waren aber die Messungen an Wasserstoff für n = 3, bei denen zusätzlich Balmer-alpha-Fluoreszenz im Sichtbaren zur Detektion eingesetzt werden konnte. Bei elektrischen Feldern bis 200 V/cm wurden Stark-Spektren für drei verschiedene Polarisationszustände der Laserstrahlung aufgenommen. Als Ergebnis konnte jeweils ein Paar isolierter Stark-Komponenten in den Spektren identifiziert werden, dessen gut messbarer Frequenzabstand durch Vergleich mit theoretischen Werten die Bestimmung der elektrischen Feldstärke ermöglicht. / A method for electric field measurements that observes the Stark spectra of the low excited levels n = 2 and n = 3 of atomic hydrogen has been explored in this work. As advantage these levels can be excited Doppler-free from the ground state by a single laser and the highly resolved Stark spectra are easy to understand and to be calculated. Good sensitivity of electric field measurements is achieved with specially designed solid state laser systems, which provide tuneable pulsed UV radiation with a high pulse peak-power and a narrow bandwidth needed for Doppler-free two-photon excitation. Using hydrogen and deuterium the Stark spectra of the n = 2 level are detected as optogalvanic signal. For three different cases of laser polarization the n = 3 spectra of hydrogen are measured simultaneously with optogalvanic and laser induced Balmer alpha fluorescence detection. Electric fields down to 200 V/cm can be determined from the Stark spectra of n = 2 level, while the spectra of n = 3 level enable measurements of electric fields as small as 50 V/cm in each of the three cases of laser polarization.

A highly regio- and diastereoselective approach towards complex 6-membered lactones was developed using allyl/propargyl benzyl ethers and delta keto esters. Crucially, the classical ET reagent SmI2 gave unsatisfactory results and it was necessary to develop and screen new Sm(II) cyclopentadienyl complexes to deliver high selectivity in the transformation. The methodology was extended to a one-pot approach to complex cycloheptanols using SmI2-H2O in a second stage of the process. Samarium(II) folding cascades were developed where simple, linear starting materials are converted to complex polycyclic architectures bearing multiple stereocentres. It was found that, depending on the sidechain in the starting material, it was possible to achieve four different pathways from the common radical intermediate. Crucially, transannular 1,5-HAT from tertiary and benzylic positions was observed to give diverse products. A proposed 1,5-HAT facilitated SmI2-mediated 6-membered lactone radical cyclisations for the first time without an activating proton donor additive. Enantioselective samarium(II) mediated cyclisation cascades were achieved, where simple beta keto esters are converted to complex polycyclic architectures bearing up to five contiguous stereocentres with high diastereo- and enantiocontrol. In the process, a simple and easy to prepare chiral aminodiol was employed which could be recycled after the reaction. Unprecedented, enantioselective transannular radical cascades allowed access to unique 3- dimensional scaffolds inaccessible by other synthetic methods.

No description available.

Made available in DSpace on 2016-06-02T20:28:22Z (GMT). No. of bitstreams: 1 1452.pdf: 916103 bytes, checksum: 40179df116306bc34414ecc8e0c08457 (MD5) Previous issue date: 2007-08-10 / Financiadora de Estudos e Projetos / In this work we study the Hamiltonian of the hydrogen atom in 1, 2 and 3 dimensions. Especifically, it is defined as a self-adjoint operator in the Hilbert space L2(Rn), n = 1, 2, 3. Nevertheless, the main goal is to study the hydrogen atom 1-D. Particularly, for this is model we address some problens related to the singularity of the Coulomb potential. / Neste trabalho vamos estudar o Hamiltoniano do átomo de hidrogênio em 1, 2 e 3 dimensões. Especificamente, queremos defini-lo como um operador auto-adjunto no espaço de Hilbert L2(Rn), n = 1, 2, 3. No entanto, o principal objetivo é estudar o átomo de hidrogênio 1-D. Em particular, para este modelo, abordaremos algumas questões relacionadas à singularidade do potencial de Coulomb −1/|x|.

L'interaction entre un rayonnement laser et un système atomique, peut conduire à différents processus physiques comme la photoionisation, l'ionisation multiphotonique, l'ionisation tunnel, génération d'harmoniques d'ordres élevés... L'importance de chacun de ces processus est en fait dépend de l'intensité et de la fréquence du champ laser considéré. Ce travail de thèse a porté sur la description de l'interaction d'un champ laser (Infrarouge et/ou Haute fréquence) avec un atome d'hydrogène (archétype d'un système à un électron actif). Nous avons tout d'abord développé les méthodes numériques pour la résolution de l'équation de Schrödinger dépendante du temps décrivant le système laser-atome d'hydrogène. Ces méthodes nous ont permis d'écrire un code numérique pour la simulation des solutions de cette équation. Nous les avons ensuite utilisées, après la vérification de la convergence de notre programme numérique pour présenter les résultats sur la photoionisation à un seul photon, sur l'ionisation multiphotonique et aussi sur un autre phénomène résultant du processus d'ionisation, il s'agit de l'absorption de photons au dessus du seuil d'ionisation, nommé processus ATI (Above Threshold Ionization). Ensuite, nous appliquerons ce code numérique à la photoionisation de l'atome d'hydrogène combinant deux photons, infrarouge (basse fréquence) et l'une de ses harmoniques (haute fréquence). Finalement, un calcul de la distribution angulaire des électrons émis a été effectué numériquement. / The interaction between laser radiation and atomic system, can lead to various physical processes such as photoionization, multiphoton ionization, tunneling ionization, High Order Harmonic Generation ... The importance of each of these processes is in fact dependent on the intensity and frequency of the laser field. In this thesis, we describe the interaction of a laser field (Infrared and / or high frequencie) with hydrogen (arche-type of a system with one active electron). We first developed numerical methods for solving the time-dependant Schrödinger equation of time describing the hydrogen atom laser system. These methods allowed us to write a numerical code for the simulation of solutions of this equation. We then used, after the verification of the numerical convergence of our program to present the results on the single-photon photoionization on multiphoton ionization. We also concentrate on another phenomenon resulting from the ionization process, it is absorption of photons above the ionization threshold, named process ATI (above threshold ionization). Then, we will apply this numerical code to the photoionization hydrogen combining two photons, infrared (low frequency) and one of its harmonics (high frequency). Finally, a calculation of the angular distribution of the emitted electron was carried out numerically.

<p>The hydrogen bond is one of nature’s ubiquitous molecular interactions. Its role ranges from that of a static provider of structural integrity in proteins to that of a dynamic coordinate, along which excited state deactivation in sunscreen molecules is achieved. The work in this dissertation employs a supersonic expansion to collisionally cool peptide oligomers and a sunscreen chromophore to the zero-point vibrational level of their low lying conformational minima. These species are interrogated using high-resolution, conformer-specific ultraviolet and infrared laser spectroscopic techniques with the aim of elucidating their intrinsic conformational preferences, hydrogen bonding networks, and excited state deactivation mechanisms.</p><p>Synthetic foldamers are oligomers composed of non-natural building blocks, such as b- and g-amino acids. Incorporation of such residues into a peptide backbone results in secondary and tertiary structures that are distinct from those found in nature. Herein, the folding propensity of a series of mixed a/b and pure b-peptides is presented. In each case, both the left- and right-handed emergence of mixed-helical secondary structures, the 11/9- and the 12/10-helix, are observed. Next, the intrinsic conformational preferences of a series of increasingly complex asparagine-containing peptides are characterized. Asparagine, with its flexible carboxamide sidechain, is omnipresent within the prion forming domain of the misfolded proteins associated with several neurodegenerative diseases. Asparagine’s propensity for b-turn structures is discussed and compared with that of analogous peptide sequences found in nature.</p><p>Methyl anthranilate is a natural product that contains an identical electronic chromophore to the sunscreen agent, meradimate. The excited state deactivation mechanism of methyl anthranilate and its water complex is determined with extensive ultraviolet spectroscopic characterization, and is discussed within the broader context of its role as a sunscreen agent. Vibronic analysis coupled with computational results indicate extensive heavy-atom rearrangement leading to hydrogen atom dislocation, rather than full transfer, on the S₁ surface. This phenomenon is further characterized with infrared spectroscopy and theoretical modeling, in which the NH stretch is adiabatically separated from other internal coordinates. Extensive dilution of the dislocated NH stretch oscillator strength over many transitions and ~1,300 cm^-1 is predicted. These results may have implications for similar molecules, such as salicylic acid and its derivatives.</p>

Fotoredoxkatalys har nyligen genomgått en renässans inom organisk kemi då metoden har möjliggjort framtagandet utav nya reaktionsvägar med milda reaktionsbetingelser genom att använda sig av synligt ljus. I det här arbetet undersöktes metodens bredd genom att kombinera metoden med väteatomöverföringskatalys för att funktionalisera C–H bindningar i α-position till heteroatomer och på så sätt skapa icke-naturliga α-aminosyror. Resultaten från detta arbete gav upp till 60% utbyte genom att kombinera dessa två katalysmetoder för substrat med Boc som skyddsgrupp, medan tertiära aminer inte krävde en väteatomöverföringskatalysator för kunna funktionaliseras. Den syntetiska metoden utan väteatomöverföringskatalys verkar dock inte vara applicerbara för sekundära aminer, men ser ut att fungera för C–H aktivering i α-position till svavelatomer vilket tyder på denna simplare metod utan väteatomsöverföring bör vara applicerbar för flera typer av substrat än för bara aminer / Photoredox catalysis has recently undergone a renaissance in the field of organic chemistry due the enabling of new reaction pathways under mild reaction conditions using visible light. In this work, the scope of this technology was explored by combining it with hydrogen atom transfer (HAT) to perform C–H functionalization in α-position to heteroatoms for synthesis of unnatural α-amino acids. The results showed that this is a viable method, gaining up to 60% yield using a dual catalytic system for Boc protected amines, while the functionalization of tertiary amines does not require HAT in order to work. Secondary amines proved to be non-applicable using the developed synthetic route without HAT catalyst while C–H activation in α-position to sulfur atoms gave similar response as tertiary amines – indicating that C–H activation without HAT should be applicable to a wider substrate scope than only using amines.

Die Entwicklung Freier-Elektronen-Laser und einer neuen Generation von Strahlungsquellen erlaubt die Realisierung hoher Intensitäten und kurzer Pulsdauern. Im Regime niedriger Laserintensitäten war bisher die Dipolnäherung recht erfolgreich bei der Beschreibung der durch die Licht-Materie-Wechselwirkung erzeugten Dynamik, wodurch viele experimentell beobachtete Resultate reproduziert werden konnten. Bei den durch die neuen Strahlungsqullen erzeugten bisher unerreichten Intensitäten und Rönten-Wellenlängen kann die Dipolnäherung allerdings zusammenbrechen. Höhere Multipol-Wechselwirkungen, die mit dem Strahlungsdruck assoziiert werden, sollten dann erwartungsgemäß wichtig zur genauen Beschreibung der Wechselwirkungsdynamiken werden. In dieser Arbeit wird eine Methode zur Lösung der nichtrelativistischen zeitabhängigen Schrödingergleichung zur Beschreibung von Systemen mit einem einzelnen aktiven Elektron, das mit einem Laserfeld wechselwirkt, über die Dipolnäherung hinausgehend erweitert. Dabei wird sowohl die Taylor- als auch die Rayleight-Multipolentwicklung des Retardierungsterms ebener Wellen verwendet. Es wird erwartet, dass die Berücksichtigung höherer Ordnungen der Multipolwechselwirkung zu einer erhöhten Genauigkeit und Richtigkeit der Resultate führen. Weiterhin wird gezeigt, dass die Rayleigh-Multipolentwicklung für gleiche Laserparameter genauer ist und schneller zur Konvergenz der numerischen Rechnung führt. Die nicht-Dipoleffekte spiegeln is sowohl in den differentiellen als auch den totalen Ionisierungswahrscheinlichkeiten in Form von erhöhten Ionisierungsausbeuten, verzerrten ATI Strukturen und einer Asymmetrie in der Photoelektronenwinkelverteilung in der Polarisations und Propagationsrichtung wider. Es wird beobachtet, dass die nicht-Dipoleffekte mit der Intensität, Wellenlänge und Pulsdauer zunehmen. Es werden Ergebnisse sowohl für das Wasserstoffatom als auch das Heliumatom gezeigt. / The development of free-electron lasers and new generation light sources is enabling the realisation of high intensities and short pulse durations. In the weak-field intensity regime, the electric dipole approximation has been quite successful in describing the light-matter interaction dynamics reproducing many of the experimentally observed features. But at the unprecedented intensities and x-ray wavelengths produced by the new light sources, the electric dipole approximation is likely to break down. The role of higher multipole-order terms in the interaction Hamiltonian, associated with the radiation pressure, is then expected to become important in the accurate description of the interaction dynamics. This study extends the solution of the non-relativistic time dependent Schrödinger equation for a single active electron system interacting with short intense laser pulses beyond the standard dipole approximation. This is realized using both the Taylor and the Rayleigh plane-wave multipole expansion series of the spatial retardation term. The inclusion of higher multipole-order terms of the interaction is expected to increase the validity and accuracy of the calculated observables relative to the experimental measurements. In addition, it is shown that for equivalent laser parameters the Rayleigh multipole expansion series is more accurate and efficient in numerical convergence. The investigated non-dipole effects manifest in both differential and total ionization probabilities in form of the increased ion yields, the distorted above-threshold-ionization structure, and asymmetry of the photoelectron angular distribution in both polarization and propagation directions. The non-dipole effects are seen to increase with intensity, wavelength, and pulse duration. The results for hydrogen as well as helium atom are presented in this study.