Made available in DSpace on 2014-07-29T12:05:40Z (GMT). No. of bitstreams: 1 Tese_FINALJoao_Nabout.pdf: 1455749 bytes, checksum: 9b7b11f9fe664d7c2e865eff445ff3d0 (MD5) Previous issue date: 2009-11-17 / Macroecology of the genus Uca (Crustacea, Decapoda): Patterns of diversity, distribution and responses to global change. The genus Uca, composed by 97 species, has a worldwide distribution on coastal marine regions, mainly in tropical environments. Many researches have used the genus Uca as a model of study, although the actual scientific knowledge about this group is dispersed. Moreover, few studies have investigated its global and evolutive patterns. In this sense, considering that the genus Uca has no taxonomic problems (there is a consensus about its distribution and species identification), presents wide geographical distribution and has phylogenetic topologies, this group can be used as an excellent model to test macroecological and evolutionary hypotheses, and to discuss the effects of climate change on coastal organisms. The aim of this study was to detect trends and biases in scientific literature about the genus Uca, as well as to assess macroecological patterns (at a global scale) and to evaluate the influence of climate change on the geographical range size and species richness. Moreover, we associated the information generated to improve conservation strategies for species of the genus Uca. Considering our goals, we generated four papers in this thesis. Among the most prominent results, we observed that, the number of papers about the genus Uca indexed in Thomson ISI database, did not increase between 1991 and 2007, which may indicate the lack of interest of the scientific community on this taxonomic group. Moreover, the majority of the scientific production about the genus Uca came from institutions in the USA. The studies about the genus Uca were mainly characterized as population papers (which analyzes population attributes such as density, distribution and ecological interactions). The results of species accumulation curve demonstrated that the total number of Uca species currently know (97 described species) is substantially lower than the number predicted by the asymptote of the Gompertz model (134 species predicted), suggesting that new species need to be described. However, a new species of Uca is not described since 1987. Models were generated to explain the date of species description based on the body size, geographical range size, human influence and the type of habitat of each species. These models were selected using the Akaike Information Criteria (AIC). The best model among the candidate ones (explaining 37% of the total variance) was composed by variables representing the geographical range size of species, their body size and the human influence on them. In other words, large-bodied species and those widely distributed, mainly in regions with elevated human influence, were described earlier. In another paper of this thesis, we evaluated the levels of phylogenetic heritability of species of the genus Uca on their geographical range size, shape and position. If a strong phylogenetic signal of geographic range sizes exists between close related species, we can predict the unknown geographic range of species through the known geographic range of its relatives, which is useful for conservation purposes. However, the absence of phylogenetic signal was evidenced for this trait. On the other hand, there was a strong phylogenetic pattern considering the position of the range (mainly along longitudinal axis), probably due to mechanisms of vicariant allopatric speciation and to the geographical structure of the cladogenesis of the group. In the last paper, the impact of global changes on geographic range size of genus Uca were modeled, producing a comprehension about a poleward shift and elaborating maps of species richness based in two scenarios of global change. The models generated presented good performance, and predictions are that the species will probably have reduced the geographical range size and some species will be extinct (considering two scenarios until 2050), mainly in the tropical regions. Moreover, the range of species with midpoints in both hemispheres changed towards to poles in the future scenarios of climatic changes. Finally, the results of this set of papers highlighted the urgency of detailed studies for some species of Uca, and in some coastal marine regions (e.g. Indo-West Pacific) to evaluate the actual status of the distribution of species of the genus Uca and the real species richness of this genus. This is essential to generate local strategies aiming to minimize impacts of global change on coastal organism / O gênero Uca é composto atualmente por 97 espécies, distribuídas mundialmente, ocupando ambientes costeiros marinhos, principalmente da região tropical. Diversos campos de pesquisa têm desenvolvidos trabalhos usando o gênero Uca como modelo, entretanto, atualmente o conhecimento científico sobre esse grupo apresenta-se disperso, além disso, estudos sobre padrões globais e evolutivos ainda são incipientes. Dessa forma, considerando que o gênero Uca é taxonomicamente resolvidos (i.e., consenso na distribuição e identificação das espécies), apresenta ampla distribuição geográfica e existem topologias filogenéticas, estes tornam-se excelentes modelos para testar hipóteses macroecólogicas, evolutivas e discutir efeitos de mudanças climáticas sobre organismos costeiros. O objetivo geral desse trabalho foi avaliar tendências e detectar vieses da literatura científica global de caranguejos do gênero Uca, bem como investigar padrões macroecológicos em escala global e a influência das mudanças climáticas na distribuição geográfica e riqueza de espécies desse grupo de caranguejo, além disso, associar as informações geradas para avançar em estratégias de conservação para essas espécies. Dessa forma, considerando o objetivo geral desse trabalho, foram gerados quatro artigos apresentados nessa tese. Dentre os resultados mais importantes, observamos que o número de artigos sobre Uca indexados na base Thomson ISI não aumentou ao longo dos anos (1991 até 2007), o que pode indicar que não houve aumento de interesse da comunidade científica com esse grupo de organismo, além disso, a maior parte da produção científica sobre Uca foi desenvolvidas por instituições dos Estados Unidos. Os estudos sobre Uca foram principalmente caracterizados como artigos de cunho populacional (i.e. analisaram atributos como densidade, distribuição e interações ecológicas). Apesar de um longo tempo não serem descritas novas espécies de Uca (última espécie foi descrita em 1987), os resultados da curva de acumulação de espécies demonstraram que o número total de espécies de Uca atualmente descrito é menor do que o número de espécies predito pela assíntota do modelo de Gompertz (preditos 134 espécies), sugerindo que existem novas espécies de Uca para serem descritas. Além disso, foram gerados modelos para explicar a data de descrição de espécies, baseado no tamanho da carapaça, tamanho da área de distribuição geográfica, influência humana nos locais de ocorrência das espécies e o tipo de habitat da espécie. Esses modelos foram confrontados e selecionados de acordo com o Critério de Informação de Akaike (AIC). O melhor modelo foi composto pelo tamanho da distribuição geográfica, tamanho do corpo e influência humana, explicando 37% da variação total dos dados, dessa forma, as espécies descritas primeiramente apresentaram maior tamanho corpóreo, maiores áreas de distribuição geográfica e ocorrem em regiões de elevada influência humana. Em outro artigo desenvolvido nessa tese, foi avaliado os níveis de herdabilidade filogenética do tamanho, forma e posição da distribuição geográfica de espécies de Uca. A existência do sinal filogenético para o tamanho da distribuição geográfica pode auxiliar em estratégias para conservação, pois é possível prever o tamanho da distribuição geográfica de uma espécie caso se conheça o tamanho da distribuição de uma espécie filogeneticamente próxima. Entretanto, para as espécies de Uca, foi observado ausência de sinal filogenético para esse caráter. Somente a posição da distribuição geográfica (ao longo do eixo longitudinal) apresentou um forte padrão filogenético, possivelmente devido ao processo de especiação alopátrica vicariante e a estrutura geográfica dos clados. Para o último artigo, foram modelados os impactos das mudanças climáticas globais sobre a distribuição geográfica das espécies de Uca, gerando uma compreensão do deslocamento das espécies em direção aos pólos e ainda produzindo um mapa de riqueza de espécies com base em cenário otimistas e pessimistas de mudanças climáticas globais. Os modelos gerados apresentaram bom desempenho, e grande parte das espécies de Uca apresentarão diminuição da distribuição geográfica acarretando perda de espécies (para cenários projetados para 2050), principalmente nas regiões tropicais, ainda assim, as espécies com pontos médios de ocorrência em ambos os hemisfério, tenderão a direcionar-se para os pólos nos cenários futuros de mudanças climáticas. Por fim, os resultados desse conjunto de artigos evidenciam a urgência de estudos ambientais para diversas espécies de Uca e de regiões costeiras (e.g. Indo-Oeste Pacífico) a fim de gerar um painel atualizado da distribuição e riqueza de espécies de Uca, que permitirão gerar estratégias locais para minimizar impactos das mudanças climáticas

Submitted by Cássia Santos (cassia.bcufg@gmail.com) on 2014-11-11T12:06:48Z No. of bitstreams: 2 Tese Geiziane Tessarolo - 2014.pdf: 5275889 bytes, checksum: fb092b496eb6eae85e89c28d423c44d9 (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) / Approved for entry into archive by Jaqueline Silva (jtas29@gmail.com) on 2014-11-17T15:10:55Z (GMT) No. of bitstreams: 2 Tese Geiziane Tessarolo - 2014.pdf: 5275889 bytes, checksum: fb092b496eb6eae85e89c28d423c44d9 (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) / Made available in DSpace on 2014-11-17T15:10:55Z (GMT). No. of bitstreams: 2 Tese Geiziane Tessarolo - 2014.pdf: 5275889 bytes, checksum: fb092b496eb6eae85e89c28d423c44d9 (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) Previous issue date: 2014-04-29 / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPES / Aim Species Distribution Models (SDM) can be used to predict the location of unknown populations from known species occurrences. It follows that how the data used to calibrate the models are collected can have a great impact on prediction success. We evaluated the influence of different survey designs and their interaction with the modelling technique on SDM performance. Location Iberian Peninsula Methods We examine how data recorded using seven alternative survey designs (random, systematic, environmentally stratified by class and environmentally stratified using p-median, biased due to accessibility, biased by human density aggregation and biased towards protected areas) could affect SDM predictions generated with nine modelling techniques (BIOCLIM, Gower distance, Mahalanobis distance, Euclidean distance, GLM, MaxEnt, ENFA and Random Forest). We also study how sample size, species’ characteristics and modelling technique affected SDM predictive ability, using six evaluation metrics. Results Survey design has a small effect on prediction success. Characteristics of species’ ranges rank highest among the factors affecting SDM results: the species with lower relative occurrence area (ROA) are predicted better. Model predictions are also improved when sample size is large. Main conclusions The species modelled – particularly the extent of its distribution – are the largest source of influence over SDM results. The environmental coverage of the surveys is more important than the spatial structure of the calibration data. Therefore, climatic biases in the data should be identified to avoid erroneous conclusions about the geographic patterns of species distributions. / Aim Species Distribution Models (SDM) can be used to predict the location of unknown populations from known species occurrences. It follows that how the data used to calibrate the models are collected can have a great impact on prediction success. We evaluated the influence of different survey designs and their interaction with the modelling technique on SDM performance. Location Iberian Peninsula Methods We examine how data recorded using seven alternative survey designs (random, systematic, environmentally stratified by class and environmentally stratified using p-median, biased due to accessibility, biased by human density aggregation and biased towards protected areas) could affect SDM predictions generated with nine modelling techniques (BIOCLIM, Gower distance, Mahalanobis distance, Euclidean distance, GLM, MaxEnt, ENFA and Random Forest). We also study how sample size, species’ characteristics and modelling technique affected SDM predictive ability, using six evaluation metrics. Results Survey design has a small effect on prediction success. Characteristics of species’ ranges rank highest among the factors affecting SDM results: the species with lower relative occurrence area (ROA) are predicted better. Model predictions are also improved when sample size is large. Main conclusions The species modelled – particularly the extent of its distribution – are the largest source of influence over SDM results. The environmental coverage of the surveys is more important than the spatial structure of the calibration data. Therefore, climatic biases in the data should be identified to avoid erroneous conclusions about the geographic patterns of species distributions.

Made available in DSpace on 2014-07-29T16:21:59Z (GMT). No. of bitstreams: 1 Tese Leandro Juen.pdf: 3783096 bytes, checksum: 0fd638d7205b8792f80d6c2e754a3052 (MD5) Previous issue date: 2011-02-15 / The forests of Amazon Basin contain the most part of species diversity in the world. Many hypotheses have been proposed to explain the origin and maintenance of this great diversity, based mainly in mechanisms of migration, speciation and environmental constraints imposed by environment to the organisms. One of these hypotheses is the Theory of River Hypothesis, proposed by Alfred Russell Wallace during his studies in the Neotropical region, which relates variation in species richness with large rivers, suggesting that these rivers serve as a barrier preventing the dispersal of organisms. Thus, this study aimed to know the distribution and pattern of species diversity of Odonata community present in the interfluve areas of large rivers of Amazon Basin, and evaluate if this distribution corresponds to the Theory of Rivers Hypothesis, testing 1) the relative importance of the biogeographic history and of ecological hypotheses to explain the endemism patterns in interfluve areas of Amazonian biome in Brazil; 2) if the pattern of species distribution in interfluve areas of large Amazonian rivers is supported by the Theory of Rivers Hypothesis; and 3) the relative importance of spatial and environmental features in variation of adult Odonata community composition. To test this, were carried out samplings in 92 igarapés distributed in five interfluve regions, and occurrence data of species based in recent literature compilations, museums and other studies carried out in the region were also collected. Results showed that: 1) the environmental similarity can be considered the main feature in the Odonata distribution, possibly due to environmental specificity developed during the long history of some clades in this system. The group with the smaller dispersal ability, Zygoptera, retained more biogeographic information on possible historical features that determine the current distribution. The great vagility of Anisoptera may have facilitated the crossing of rivers. The transport of larvae through macrophyte banks, the lateral change of river course and the inversion of basin drainage system can be explanations for the absence of isolation effect on species groups studied. 2) Rivers did not show any effect of dispersal barrier to the distribution of species, probably because of the dispersal ability of species, mainly Anisoptera, together with the lateral migration of river channels, macrophyte banks, and rivers with presence of many meanders, which would promote dispersal, diluting the barrier effect. 3) Environmental and geographical features are important to determine the patterns of beta diversity among studied sites. The effect found varied considerably between the two suborders. The initial similarity was higher for Zygoptera. For the geographical distance necessary to reach the half of similarity (halving distance), the results were higher for Anisoptera. Ecological requirements and dispersal ability of species can explain the environmental and spatial effects on beta diversity. Variation found between the suborders can be due to the different requirements of species, which can be related to body size. Smaller species may be more sensitive to environmental variations by ecophysiological constraints. If we consider the frequency of endemism between these groups (Chapters 1 and 2), Zygoptera and the families with species with smaller body size (Coenagrionidae and Protoneuridae) may be considered as priority focus for conservation strategies or as surrogates for selection of priority areas for conservation of this group, and, assuming the scarce amount of biogeographical information of Amazonia, also for other invertebrate groups. / As florestas da Bacia Amazônica contêm a maior fração da diversidade de espécies do mundo. Muitas hipóteses têm sido propostas para explicar a origem e a manutenção dessa grande diversidade, baseadas, principalmente, nos mecanismos de migração, especiação e nas restrições ambientais impostas pelo ambiente aos organismos. Uma dessas hipóteses é a Teoria de Isolamento pelos Rios, proposta por Alfred Russell Wallace durante seus estudos na região Neotropical, que relaciona a variação da riqueza de espécies com os grandes rios, sugerindo que eles funcionariam como uma barreira impedindo a dispersão dos organismos. Dessa forma, este estudo visou conhecer a distribuição e o padrão de diversidade das espécies que compõem as comunidades de Odonata, presentes nas áreas de interflúvios dos grandes rios amazônicos, avaliando se essa distribuição corresponde à Teoria de Isolamento por Rios. Testando 1) a importância relativa da história biogeográfica e de hipóteses ecológicas para explicar os padrões de endemismo nas áreas de interflúvios do Bioma Amazônico no Brasil; 2) Avaliar se o padrão de distribuição de espécies nas áreas de interflúvios dos grandes rios amazônicos é suportado pela Teoria de Isolamento por Rios; 3) A importância relativa dos fatores espaciais e ambientais na variação da composição das comunidades de adultos de Odonata. Para isso foram realizadas coletas em 92 igarapés distribuídos em cinco regiões de interflúvio, e dados de ocorrência das espécies baseados em recentes compilações da literatura, museus e outros estudos realizados na região. Os resultados mostraram que: 1) A similaridade ambiental pode ser considerada o fator determinante na distribuição de Odonata, possivelmente devido à especificidade ambiental desenvolvida durante a longa história de alguns clados no sistema. O grupo com menor capacidade de dispersão, Zygoptera, reteve mais informações biogeográficas sobre possíveis fatores históricos que determinam a corrente distribuição. A grande vagilidade dos Anisoptera pode ter facilitado a travessia dos rios. O transporte das larvas pelos bancos de macrófitas, a mudança lateral dos cursos dos rios e a inversão do sistema de drenagem da bacia podem ser explicações para a ausência do efeito de isolamento nos grupos de espécies estudados. 2) Os rios não exerceram efeito de barreira à distribuição das espécies, possivelmente devido á capacidade de dispersão das espécies, principalmente, Anisoptera, juntamente com a migração lateral do canal dos rios, bancos de macrófitas, rios com a presença de muitos meandros, que promoveriam a dispersão, diluindo o efeito de barreira. 3) As características ambientais e geográficas são importantes na determinação dos padrões de diversidade beta entre os locais estudados, o efeito encontrado variou consideravelmente entre as duas subordens. A similaridade inicial foi maior para Zygoptera, já para a distância geográfica necessária para atingir a metade da similaridade (halving distance), os resultados foram maiores para Anisoptera. Os requerimentos ecológicos e a capacidade de dispersão das espécies podem explicar o efeito do ambiente e do espaço na diversidade beta. As variações encontradas entre subordens podem ser devido aos diferentes requerimentos das espécies, que podem estar ligados ao tamanho corporal. As espécies de menor tamanho corporal devem ser mais sensíveis às variações ambientais por restrições ecofisiológicas. Se considerarmos a frequência de endemismos entre esses grupos (Capitulo 1 e 2), Zygoptera e as famílias com espécies de menor tamanho corporal (Coenagrionidae e Protoneuridae) devem ser consideradas como focos prioritários para estratégias de conservação ou como surrogates para escolha de áreas prioritária pensando na conservação desse grupo e assumindo a pequena quantidade de informação biogeográfica existente na Amazônia, para esse e outros grupos de invertebrados.

Made available in DSpace on 2014-07-29T16:23:33Z (GMT). No. of bitstreams: 1 Natalia_Torres_.pdf: 1724419 bytes, checksum: 79787de18f11d3cfcea9e5275d3f7129 (MD5) Previous issue date: 2010-11-19 / Recently, Species Distribution Modelling (SDM) has been widely used as base for several types of analyses, including evaluations of climate changing impact on species distribution and conservation strategies settlement. This methodology enables the prediction of potential geographic distribution based on species ecological requirements, extrapolating data from known occurrences to unknown areas. There is a wide variety of methods which presents different capabilities to synthesize the significant relationships between species data and the environmental variables used as preditors. These variations are consequences of a series of factors that influence model s performance, such as species characteristics, the kind and quantity of data available, and the scale of the analyses. In this study we adopted the jaguar as a model to evaluate eleven SDM. It was evaluated the spatial autocorrelation effects between presence records on model s performance, and the relationship between environmental suitability obtained through these methods and jaguar population density. The obtained results were used as a basis for the evaluation of jaguar conservation topics, including analyses of how global climate changing and land use predictions will affect its distribution and evaluation of protected areas system in maintaining suitable areas for species occurrence in the future. It was demonstrated that depending on the model applied, the species data amount can be more influential than the spatial autocorrelation between presence points, and that the expected positive relationship between model-based suitability estimate and jaguar density was found only for four SDM, but always with a low coefficient of determination showing a weak data fitness. The analyses also showed that suitability values inside protected areas are greater than expected by null model, and this difference tend to increase with the global climate change scenario evaluated, demonstrating that it is not expected that environmental suitable areas for jaguars will shift out from the existing protected areas. Considering future predictions, the main conclusion is that some regions which must go through an environmental suitability increase for jaguar occurrence in the future will be converted from natural vegetation to agricultural land, indicating that the opportunities for jaguar s effective conservation actions are daily becoming more restricted, in such a way that the calling for a proactive conservation approach is urgent. / Recentemente, a Modelagem de Distribuição de Espécies (SDM) tem sido amplamente utilizada como base para diversos tipos de análises, incluindo avaliações do impacto de mudanças climáticas na distribuição das espécies e estabelecimento de estratégias de conservação. Essa metodologia possibilita a predição da distribuição geográfica potencial com base nos requerimentos ecológicos dos organismos, extrapolando para áreas desconhecidas a partir de pontos conhecidos. Existe uma grande variedade de métodos que diferem quanto à sua habilidade de sintetizar relações significativas entre a ocorrência das espécies e as variáveis ambientais preditivas adotadas. Essas diferenças se devem a uma série de fatores que influenciam o desempenho desses modelos, como por exemplo, as características da espécie, o tipo e quantidade de dados disponíveis e a escala das análises. Neste trabalho, adotamos a onça-pintada como espécie modelo para a avaliação de onze métodos de SDM. Foram analisados os efeitos da autocorrelação espacial entre pontos de presença na performance dos modelos, e avaliada a relação entre estimativas de adequabilidade climática obtidas por esses métodos e dados de densidade populacional de onça-pintada. Os resultados obtidos serviram como base para a avaliação de aspectos da conservação da espécie, incluindo análises de como mudanças climáticas globais e do uso do solo afetarão a sua distribuição e avaliação da eficiência do sistema de áreas protegidas em manter áreas adequadas para a ocorrência da espécie no futuro. Foi demonstrado que dependendo do método, a quantidade de dados da espécie pode influenciar mais os resultados do que a própria autocorrelação espacial entre os pontos de presença, e que a relação positiva esperada entre a adequabilidade climática e densidade populacional foi encontrada para apenas quatro dos métodos, mas sempre com fraco ajuste dos dados. De acordo com as análises, as áreas protegidas apresentam maior adequabilidade do que o esperado se elas fossem aleatoriamente selecionadas, e a eficiência dessas não será comprometida no futuro em relação à manutenção dessa adequabilidade. Em termos de predições futuras, a principal conclusão é que algumas das regiões que devem passar por um incremento da adequabilidade climática para a onça-pintada no futuro serão convertidas de ambientes naturais para agricultura ou pastagem, demonstrando que as oportunidades para ações efetivas de conservação da onça-pintada estão a cada dia se tornando mais restritas, sendo urgente a necessidade de estratégias pró-ativas de conservação da espécie.

Submitted by JÚLIO HEBER SILVA (julioheber@yahoo.com.br) on 2017-05-22T20:00:54Z No. of bitstreams: 2 Tese - Daniel de Paiva Silva - 2014.pdf: 10957994 bytes, checksum: 6f0100ece2bde63eead33101bf358768 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) / Rejected by Luciana Ferreira (lucgeral@gmail.com), reason: Sei que já enviou o comprovante, mas não conta a ata e o TECA não está onde deveria. on 2017-05-25T11:39:37Z (GMT) / Submitted by JÚLIO HEBER SILVA (julioheber@yahoo.com.br) on 2017-05-25T18:42:10Z No. of bitstreams: 2 Tese - Daniel de Paiva Silva - 2014.pdf: 10957994 bytes, checksum: 6f0100ece2bde63eead33101bf358768 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) / Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2017-05-26T14:45:48Z (GMT) No. of bitstreams: 2 Tese - Daniel de Paiva Silva - 2014.pdf: 10957994 bytes, checksum: 6f0100ece2bde63eead33101bf358768 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) / Made available in DSpace on 2017-05-26T14:45:48Z (GMT). No. of bitstreams: 2 Tese - Daniel de Paiva Silva - 2014.pdf: 10957994 bytes, checksum: 6f0100ece2bde63eead33101bf358768 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) Previous issue date: 2014-02-28 / Conselho Nacional de Pesquisa e Desenvolvimento Científico e Tecnológico - CNPq / The world we live in faces fast and intense environmental changes, deeply related to human activities, which directly or indirectly are related to the current biodiversity crisis. Thus, the existence of quality biological, ecological, and distributional data is of utmost importance for the support of active conservation practices. Nonetheless, both Linnean (lack of taxonomical data) and Wallacean (lack of distributional data) shortfalls are important setbacks hindering the effectiveness of conservationist decisions. The data harbored in museums and overall collections is excellent to support conservational measures. Nonetheless, usually this data is biased and needs to be adequately filtered before being used. Insect and arthropod species are under sampled, what impedes them to be properly considered under Conservation Biogeography frameworks. In such scenario, even insect groups with relatively known biology and ecology are neglected in practical conservation actions. Despite that, with the advent of new computational tools allied with good theories and good distributional data of insect species, it is possible to contemplate those biological groups in concrete and efficient conservation actions. Therefore, in the first part of this thesis, considering bees from the Megachile genus (Chapter 1) and from the Meliponini tribe (Chapter 2), we evaluated potential biases affecting those data, but also evaluate potential areas for new field surveys. The Wallacean shortfalls are commonly used to justify the implementation of new field surveys. Therefore, in the second part of this thesis, we used the new occurrences of the bee species [Aglae caerulea (Apidae: Eulgossini) – Chapter 3; and the exotic species, Lithurgus huberi (Apidae: Lithurgini) – Chapter 4] allied with distribution modelling to predict these species potential distributions and indicate areas for future new samplings. On the third and last part of the thesis, we considered a regional spatial scale and habitat loss and fragmentation questions to address their effects on the bee biodiversity from the Cerrado biome found within the Goiás state. In Chapter 5, we evaluated the effects of anthropic areas amount and their isolation on two orchid-bee species from the Cerrado (Eulaema nigrita and Eufriesea auriceps), which apparently are not affected by the increase of anthropic areas in this biome. Later, in the last chapter (Chapter 6), we evaluated the response of all bee community we sampled in Cerrado areas within state of Goiás, as well as the sub groups of eusocial and solitary species, to the landscape structure of our sampling areas, considering different local spatial scales. / O mundo vive rápidas e intensas mudanças ambientais intimamente relacionadas às atividades humanas e que, direta ou indiretamente, estão relacionadas à atual crise de biodiversidade. Assim, a existência de dados biológicos, ecológicos e distribucionais de qualidade é de extrema importância dar suporte a tomada de ações práticas de conservação. Entretanto, os déficits Linneanos (falta de dados taxonômicos) e Wallaceanos (falta de dados distribucionais) são importantes problemas que impedem a efetiva tomada de decisões conservacionistas. Neste contexto, dados provenientes de museus e coleções, após cuidadosa filtragem, são excelentes para apoiarem tais ações. Em geral, esta informação é enviesada e necessita de cuidado adequado antes de ser utilizada. Espécies de artrópodes e insetos são sub amostrados, impedindo sua utilização em propostas práticas de conservação utilizadas na Biogeografia da Conservação. Neste cenário, mesmo grupos cuja ecologia e biologia são bem conhecidas, acabam não sendo utilizados. Apesar disso, o advento de novas ferramentas computacionais aliados a boas teorias e bons dados de distribuição das espécies de insetos, é possível a contemplação do uso de vários grupos entomológicos em ações concretas de conservação. Assim, na primeira parte da presente tese, considerando abelhas do gênero Megachile (Capítulo 1) e da tribo Meliponini (Capítulo 2), nós analisamos os eventuais vícios de amostragem existentes nos dados de ocorrência das espécies destes gêneros, descrevendo o estado atual do conhecimento da distribuição destas abelhas e áreas para potenciais amostragens futuras. Os déficits Wallaceanos são frequentemente utilizados como justificativa para a realização de novos inventários biológicos. Deste modo, na segunda parte desta tese, nós utilizamos novas ocorrências de duas espécies de abelhas (Agale caerulea (Apidae: Euglossini) – Capítulo 3; e a espécie invasora Lithurgus huberi (Apidae: Lithurgini) – Capítulo 4) com abordagens de modelagens de distribuição potencial para predizer suas distribuições e indicar locais ideias para novas coletas. Na terceira e última parte desta tese, considerando-se uma escala espacial mais regional, nós consideramos questões de perda de habitats e fragmentação sobre a biodiversidade de abelhas do Cerrado goiano. No capítulo 5, nós avaliamos os efeitos da quantidade de habitat e isolamento sobre duas espécies de abelhas das orquídeas do Cerrado (Elaema nigrita e Eufriesea auriceps), que, aparentemente não são afetadas pelo aumento de áreas antrópicas no bioma. Por fim, no último capítulo (Capítulo 6), nós avaliamos a resposta de toda a comunidade de abelhas coletadas em áreas de Cerrado de Goiás, bem como a resposta das espécies de grupos de abelhas solitárias e eusociais, à estrutura da paisagem dos nossos pontos de coletas, em diferentes escalas espaciais locais.

Submitted by Edineia Teixeira (edineia.teixeira@unioeste.br) on 2018-09-28T18:12:13Z No. of bitstreams: 2 Marilia_Favalesso_2018.pdf: 1901703 bytes, checksum: 0d9b6ae60903ec7aa858792cf86a51f2 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) / Made available in DSpace on 2018-09-28T18:12:13Z (GMT). No. of bitstreams: 2 Marilia_Favalesso_2018.pdf: 1901703 bytes, checksum: 0d9b6ae60903ec7aa858792cf86a51f2 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) Previous issue date: 2018-02-19 / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPES / Lonomia obliqua Walker 1855 (Saturniidae: Hemileucinae) is a species of moth of sanitary interest in Brazil. Their larvae are etiological agents of lonomism, a form of erucism caused by the contact of the human beings with the stinging structures of the species. The most worrying symptoms of lonomism are the systemic hemorrhagic conditions that can lead to several outcomes, including death. The first official notifications of accidents with the species date back to the end of the 80s, in the state of Rio Grande do Sul. Since then, several accidents have been documented in Brazil, mainly in the south and southeast regions of the country. With the increase in the number of victims, health authorities in the state of São Paulo, represented by the “Instituto Butantã”, developed an anti-lonomic serum, which is distributed by the Ministry of Health in places with a higher prevalence of accidents. Hypotheses have been raised on the relation between the growth of the cases of lonomismo and the human occupation; however, little is known about the spatial distribution and ecological aspects of the species to enable the testing of these hypotheses. In view of the above, the present study aimed to produce a map for the potential geographical distribution of L. obliqua in Brazil, based on the combination of different ENM (Ecological Niche Modeling) algorithms. A total of 38 occurrence points were distributed across the geographic area of Brazil and Misiones, Argentina, which were partitioned for calibration and evaluation of the distribution model. Eight continuous climatic variables and only 16 previously considered variables were selected. Different ENM methodologies were tested and compared to TSS (True Skill Statistic) index values. The final model-map was composed of a combination of four algorithms (Gower, Mahalanobis, Maxent and SVM), with pseudo-absences outside a bioclimatic envelope and a number of pseudo-absences equal to that of presences. This model map was binarized from the Low Presence Threshold (LPT) and cut only for Brazil. According to this model map, the areas predicted as suitable for L. obliqua would be restricted to latitudes ~12° and ~32°, and longitudes ~39° and ~57°. When evaluating new sites of occurrence of the specie in Rio Grande do Sul, it was possible to verify that all the municipalities were in areas predicted by the model-map. A characterization of the abiotic variables related to the niche of the specie was also carried out, being these extracted from the area predicted as adequate the presence of the specie in the model map. To help characterize these variables, we also extract categorical descriptors of climate, soil and vegetation (in %). The percentage of land use classes was also extracted in order to contribute to the hypothesis that condition the increase of accidents due to human occupation. In this question, we find a large part of the area predicted within classes of agricultural soils in Brazil, which leads us to ratify the current hypotheses. Thus, the loss of habitat of the species for the agricultural enterprises increases the human contact with the specie, which should increase the number of notifications of the lonomism, generating greater epidemiological concern and habitat conservation for this specie. / Lonomia obliqua Walker 1855 (Saturniidae: Hemileucinae) é uma espécie de mariposa de interesse sanitário no Brasil. Suas larvas são agentes etiológicos do lonomismo, uma forma de erucismo causado pelo contato dos seres humanos com as estruturas urticantes da espécie. Os sintomas mais preocupantes do lonomismo são os quadros hemorrágicos sistêmicos que podem conduzir a diversos desfechos, inclusive o óbito. As primeiras notificações oficiais de acidentes com a espécie datam do final da década de 80, no estado do Rio Grande do Sul. A partir de então, diversos acidentes têm sido documentados no Brasil, principalmente nas regiões sul e sudeste do país. Com o aumento do número de vítimas, autoridades sanitárias do estado de São Paulo, representadas pelo do Instituto Butantã, desenvolveram um soro antilonômico, o qual é distribuído pelo Ministério da Saúde em localidades com maior prevalência de acidentes. Hipóteses têm sido levantadas sobre a relação entre o crescimento dos casos de lonomismo e a ocupação humana; contudo, pouco se conhece sobre a distribuição espacial e aspectos ecológicos da espécie para possibilitar os testes destas hipóteses. Diante do exposto, o presente estudo objetivou produzir um mapa para a distribuição geográfica potencial de L. obliqua no Brasil, baseando-se na combinação de diferentes algoritmos ENM (Ecological Niche Modeling). Foram utilizados 38 pontos de ocorrência distribuídos pela área geográfica do Brasil e região de Misiones, na Argentina, os quais foram particionados para calibração e avaliação do modelo de distribuição. Foram selecionadas oito variáveis contínuas climáticas e de solo entre 16 previamente cogitadas. Diferentes metodologias ENM foram testadas e confrontados quanto a valores de índice TSS (True Skill Statistic). O mapa-modelo final foi composto por uma combinação de quatro algoritmos (Gower, Mahalanobis, Maxent e SVM), com amostragens de pseudo-ausências fora de um envelope bioclimático e número de pseudo-ausências igual ao de presenças. Esse mapa-modelo foi binarizado a partir do limiar LPT (Lowest Presence Threshold) e recortado somente para o Brasil. Segundo este mapa-modelo, as áreas preditas como adequáveis a L. obliqua estariam restritas as latitudes ~12º e ~32º, e as longitudes ~39º e ~57º. Também foi realizada uma caracterização das variáveis abióticas relacionadas ao nicho da espécie, sendo essas extraídas da área predita como adequada a presença da espécie no mapa-modelo. O percentual de classes de uso da terra também foi extraído, a fim de contribuir com as hipóteses que condicionam o aumento de acidentes em função da ocupação humana. Neste quesito, encontramos grande parte da área predita dentro de classes de solos agrícolas no Brasil, o que nos leva a ratificar as hipóteses atuais. Assim, a perda de habitat da espécie para os empreendimentos agrícolas aumenta o contato humano com a espécie, o que deve aumentar o número de notificações do lonomismo, gerando maior preocupação a nível epidemiológico e de conservação de habitat para essa espécie.

Les modèles de distribution d’espèces ont été identifiées comme pertinents pour cartographier et caractériser la qualitéd’habitat des moustiques vecteurs du paludisme, Anopheles, afin de participer à l’estimation du risque de transmission decette maladie et à la définition de stratégies de lutte anti-vectorielle ciblées. La transmission du paludisme dépend de laprésence et de la distribution des vecteurs, qui dépendent elles-mêmes des conditions environnementales définissant laqualité des habitats écologiques des Anopheles. Cependant, dans certaines régions, les données de captures d’Anophelessont rares, et rend difficile la cartographie de leurs habitats. De plus, le recueil de ces données est très souvent soumis à desbiais d’échantillonnage.Cette thèse fournit une solution à la cartographie des vecteurs du paludisme, en considérant deux aspects très peu étudiésdans la modélisation : le faible nombre de sites de présence disponibles et l’existence d’un biais d’échantillonnage. Uneméthode originale de correction de l’effet du biais d’échantillonnage est proposée puis appliquée à des données de présencedu principal vecteur du paludisme en Guyane, Anopheles darlingi. Un modèle de distribution d’An. darlingi a ensuite étéconstruit, permettant d’obtenir une carte de qualité d’habitat en cohérence avec la connaissance des entomologistes etfournissant des performances de prédiction élevées. La méthode de correction proposée a ensuite été comparée auxméthodes existantes dans un contexte applicatif caractérisé par la rareté des données d’occurrence de l’espèce et laprésence d’un biais d’échantillonnage. Les résultats montrent que la méthode développée est adaptée aux cas où le nombrede sites de présence est faible. Cette thèse contribue, d’une part, à combler les lacunes théoriques et d’applicabilité desméthodes actuelles visant à corriger l’effet des biais d’échantillonnage et, d’autre part, à compléter la connaissance sur ladistribution spatiale et la bioécologie du principal vecteur du paludisme en Guyane française. / Species distribution models are identified as relevant to map and characterize the habitat quality of Anopheles genusmosquitoes, transmitting malaria, and thus to both participate in the estimation of the transmission risk of this disease and inthe definition of targeted vector control actions. The malaria transmission depends on the presence and distribution of thevectors, which are themselves dependent on the environmental conditions that define the quality of the ecological habitats of the Anopheles. However, in some areas, Anopheles collection data remain scarce, making it difficult to model these habitats. In addition, the collection of these data is very often subjected to significant sampling biases, due, in particular, to unequal accessibility to the entire study area. This thesis provides a solution to the mapping of malaria vectors, considering two very few studied aspects in modeling: the low number of available presence sites and the existence of a sampling bias. An original method for correcting the effect of the sampling bias is proposed and then applied to presence data of Anopheles darlingi species - the main vector of malaria in South America - in French Guiana. Then, a distribution model of An. darlingi was built to obtain a map of habitat quality consistent with entomologists’ knowledge and providing high prediction performances. The proposed correction method was then compared to existing methods in an application context characterized by the scarcity of the species occurence data and the presence of a sampling bias. The results show that the developed method is adapted to cases where the number of sites of presence is low. This thesis contributes, on the one hand, to fill theoretical and applicability lacuna of current methods intended to correct the effect of the sampling bias and, on the other hand, to supplement the knowledge on both the spatial distribution and the bio-ecology of the main malaria vector in French Guiana.

Les causes évolutives de certaines formes de vie en groupe sont bien identifiées mais pas celles des agrégations de diapause des arthropodes (rassemblements monospécifiques d'adultes dans des sites à localisation constante). Dans cette thèse, j'ai testé si, selon l'hypothèse du lek caché, les arthropodes se rassemblent pour trouver leurs partenaires sexuels chez la coccinelle Hippodamia undecimnotata. J'ai montré que les coccinelles se rassemblent dans des endroits avec un repère proéminent et où le risque de pesticides est faible, puis que les conditions abiotiques dans les sites sont défavorables à la survie des coccinelles. Ensuite, j'ai mis en évidence l'occurrence de nombreux accouplements dans les sites d'agrégation. Enfin, j'ai montré que ces accouplements sont peu coûteux en énergie pour les femelles, qui conservent de l'énergie pour les comportements post-agrégation. Cette thèse atteste que les agrégations de diapause font partie du système de reproduction des arthropodes. / The evolutionary significance of some kinds of group living are well-known, some others such as the diapause aggregations remain poorly known although widespread. In this thesis, I tested if the arthropods form diapause aggregations to find their mates according to the hidden lek hypothesis with the ladybird Hippodamia undecimnotata. By using a Species Distribution Model, I showed that ladybirds aggregate in places with a prominent object and where the risk of being sprayed by pesticides is low. Then, I highlighted that abiotic conditions are unfavourable to ladybirds' survival. In a third part, I found that mating is widespread activity in the aggregation sites. Finally, I showed that energetic costs linked to mating are low, and thus allow the ladybirds to disperse and display post aggregations behaviour. This thesis shows that the diapause aggregations are part of the mating system of the arthropods and that sexual selection can be a driver of the evolution of diapause aggregations.

Understanding species-habitat relationships for endangered species is critical for their conservation. However, many studies have limited value for conservation because they fail to account for habitat associations at multiple spatial scales, anthropogenic variables, and imperfect detection. We addressed these three limitations by developing models for an endangered wetland bird, Yuma Ridgway's rail (Rallus obsoletus yumanensis), that examined how the spatial scale of environmental variables, inclusion of anthropogenic disturbance variables, and accounting for imperfect detection in validation data influenced model performance. These models identified associations between environmental variables and occupancy. We used bird survey and spatial environmental data at 2473 locations throughout the species' U.S. range to create and validate occupancy models and produce predictive maps of occupancy. We compared habitat-based models at three spatial scales (100, 224, and 500 m radii buffers) with and without anthropogenic disturbance variables using validation data adjusted for imperfect detection and an unadjusted validation dataset that ignored imperfect detection. The inclusion of anthropogenic disturbance variables improved the performance of habitat models at all three spatial scales, and the 224-m-scale model performed best. All models exhibited greater predictive ability when imperfect detection was incorporated into validation data. Yuma Ridgway's rail occupancy was negatively associated with ephemeral and slow-moving riverine features and high-intensity anthropogenic development, and positively associated with emergent vegetation, agriculture, and low-intensity development. Our modeling approach accounts for common limitations in modeling species-habitat relationships and creating predictive maps of occupancy probability and, therefore, provides a useful framework for other species.

L’assemblage des espèces (leurs présences/absence) dans une communauté naturelle est la conséquence de plusieurs mécanismes de filtrage réalisés par l'environnement. Parmi ces filtres, le filtre abiotique sélectionne les espèces capables de tolérer les conditions environnementales locales. La variation de la disponibilité de l'eau dans le sol est l'un des principaux gradients environnementaux selon lesquels les espèces végétales sont différemment réparties. Considérant l’hypothèse que les traits fonctionnels et leurs relations sont hiérarchisées, les préférences d’habitat des espèces le long de gradients environnementaux devraient être déterminées par une combinaison de traits physiologiques et morpho-anatomiques hiérarchisés. Au cours de ce doctorat, mon objectif général est d'identifier les traits fonctionnels morphologiques, anatomiques et physiologiques de tolérance à la sécheresse qui peuvent prédire la présence des espèces le long d'un gradient d’hydrologie des sols. Plus spécifiquement, nous cherchons à savoir : (i) Quels sont les traits physiologiques qui reflètent le mieux la tolérance à la sécheresse ? (ii) Quelles sont les relations entre les traits morpho-anatomiques et les traits physiologiques de tolérance ? (iii) Quels sont les traits morpho-anatomiques en conditions optimales permettant de prédire la tolérance des espèces herbacées à la sécheresse ? (iv) Quelles formes ont les relations qui existe entre les traits morpho-anatomiques de tolérance en condition optimale et la présence des espèces en cas de sécheresse ? (v) Peut-on prédire les présences des espèces en cas de sécheresse à partir de leurs traits morpho-anatomiques? Nos résultats montrent (1) qu’il est possible de prédire la distribution des espèces sur un gradient d’hydrologie des sols à partir de cinq traits physiologiques de tolérance à la sécheresse. Ces cinq traits sont la photosynthèse nette maximale, la conductance stomatique maximale, le potentiel hydrique du sol au point de flétrissement, la conductance stomatique au point de flétrissement et l’efficacité d’utilisation de l’eau au point de flétrissement. Nous avons montré que (ii) les traits physiologiques de tolérance à la sécheresse sont prédits par les traits morpho-anatomiques en conditions optimales (surface spécifique foliaire, teneur en matière sèche des feuilles, teneur en azote foliaire, longueur spécifique racinaire et surface stomatique). (iii) Les traits morpho-anatomiques seuls ne sont pas de bons prédicteurs de l’hydrologie des espèces et (iv) que la séquence « traits morpho-anatomiques → traits physiologiques → hydrologie des espèces » donne les meilleures prédictions. Cependant, (v) le modèle ne donne pas de prédictions fiables si l’on utilise des traits morpho-anatomiques mesurés en conditions naturelles. Ces résultats confirment, au moins partiellement, l’hypothèse que la distribution des espèces sur un gradient hydrologiques peut être prédite à partir de leurs traits de tolérance à la sécheresse eux-mêmes prédits par leurs traits morpho-anatomiques. En résumé, nous avons utilisé une approche fonctionnelle en construisant un modèle causal prédictif qui nous a permis de nous intéresser aux mécanismes de filtrage environnementaux et plus précisément au rôle de la niche hydrologique des espèces dans l’assemblage des communautés végétales. / Abstract : Species assembly (their presence/absence) in a natural community is the consequence of several filtering mechanisms made by the environment. Among these filters, the abiotic filter selects species able to tolerate local environmental conditions. Variation in water availability in the soil is one of the main environmental gradients according to which plant species are differently distributed. Considering the hypothesis that functional traits and their relationships are hierarchical, habitat preferences of species along environmental gradients should be determined by a combination of hierarchical physiological and morpho-anatomical traits. During this PhD, my overall goal is to identify morphological, anatomical and physiological drought tolerance functional traits that can predict the presence of species along a soil hydrology gradient. More specifically : (i) What are the physiological traits that best reflect drought tolerance? (ii) What are the relationships between morpho-anatomical traits and physiological traits of tolerance? (iii) What are the optimal morpho-anatomical traits for predicting tolerance of herbaceous species to drought? (iv) What forms of relationships exist between optimal morpho-anatomical traits of tolerance and the presence of species in drought condition? (v) Can the presence of species in drought condition be predicted from their morpho-anatomical features? Our results show (1) that it is possible to predict the distribution of species on a soil hydrology gradient from five physiological traits of drought tolerance. These five traits are maximum net photosynthesis, maximum stomatal conductance, water potential of the soil at the wilting point, stomatal conductance at the wilting point, and efficiency of water use at the wilting point. We have shown that (ii) the physiological traits of drought tolerance are predicted by optimal morpho-anatomical traits (leaf area, leaf dry matter content, leaf nitrogen content, root length and stomatal surface). (iii) Morpho-anatomical features alone are not good predictors of species hydrology and (iv) the sequence “morpho-anatomical traits  physiological traits  species hydrology” gives the best predictions. However (v) the model does not provide reliable predictions using morpho-anatomical traits measured under natural conditions. These results confirm, at least partially, the hypothesis that the distribution of species on a hydrological gradient can be predicted from their drought tolerance traits themselves predicted by their morpho-anatomical features. In summary, we used a functional approach by constructing a predictive causal model that allowed us to focus on environmental filtering mechanisms and more specifically on the role of the species hydrological niche in assembling plant communities.