Os micoplasmas hemotróficos (hemoplasmas) são organismos pleomórficos, epicelulares, gram negativos que infectam a superfície dos eritrócitos de diversas espécies. Devido ao fato de ser incultivável em meios de cultura tradicionais, o diagnóstico é baseado em técnicas moleculares. Em cães, a infecção pelos hemoplasmas pode causar anemia hemolítica na fase aguda, enquanto na doença crônica os sinais são inaparentes, sendo que a imunodepressão e a esplenectomia podem desencadear a doença aguda. Os objetivos do presente estudo foram avaliar a prevalência dos hemoplasmas em cães submetidos a atendimento clínico e cirúrgico no Hospital Veterinário da Universidade de Passo Fundo (HV-UPF), identificar os fatores de risco para infecçao pelos hemoplasmas e as condições clínicas na infecção natural. Para isso, foram selecionadas amostras de sangue com EDTA submetidas com propósito diagnóstico ao Laboratório de Análises Clínicas do HV-UPF. Após a verificação do controle da extração (PCR para o gene GAPDH), as amostras foram encaminhadas ao Department of Comparative Pathobiology, Purdue University (IN, USA) para as análises moleculares. Foi realizada reação em cadeia da polimerase (PCR) para os hemoplasmas felinos (‘Candidatus Mycoplasma turicencis’, ‘Candidatus Mycoplasma haemominutum’) e caninos (Mycoplasma haemocanis e ‘Candidatus Mycoplasma haematoparvum’). Ao total, foram analisadas 347 amostras, sendo que 16 foram negativas para o controle GAPDH e excluídas do estudo. A prevalência para hemoplasma foi de 6,4% (21/331) sendo 5,1% (17/331) para Mycoplasma haemocanis e 1,8% (6/331) para um organismo geneticamente semelhante ao hemoplasma felino ‘Candidatus Mycoplasma haemominutum’. Não foram encontradas amostras positivas para ‘Candidatus Mycoplasma turicencis’ e ‘Candidatus Mycoplasma haematoparvum’. Os cães positivos para hemoplasmas tinham como fatores de risco a presença de ectoparasitas (carrapatos e/ou pulgas), idade avançada e habitavam em casa. Embora tenha sido identificada a presença de correlação entre as neoplasias e feridas causadas por brigas com outros cães e a infecção pelos hemoplasmas, tais resultados foram atribuídos a uma influência da idade e a presença de ectoparasitas. Não houve variações hematológicas e bioquímicas em decorrência da infecção pelo Mycoplasma haemocanis. Refere-se, no presente estudo, o primeiro estudo relacionando a freqüência da infecção pelos hemoplasmas em cães no Brasil. / The hemotropic mycoplasmas (haemoplasmas) are pleomorphic epicellular and gramnegative organisms that do not grow in conventional culture media. The organisms infect the red blood cell surface of several species and nowadays the diagnosis is based on molecular techniques. In dogs, the acute infection causes severe hemolytic anemia, while in the chronic disease the clinical signs are unapparent. In addition splenectomy or immunosuppression may result in the acute disease. The aims of the present study were to evaluate the prevalence of haemoplasmas in dogs that were submitted to clinical or chirurgical procedures at the Veterinary Teaching Hospital of the University of Passo Fundo (UPF-HV), to identify the risk factors for infection and the clinical conditions of haemoplasma natural infection. EDTA blood samples that were submitted for diagnosis purpose at the Laboratório de Análises Clínicas of the HV-UPF were randomly selected and clinical data were obtained from the hospital database. After DNA extraction and the internal control, the samples were sent to the Department of Comparative Pathobiology at the Purdue University (IN, USA), School of Veterinary Medicine, for molecular analysis. A polymerase chain reaction (PCR) for feline haemoplasmas ('Candidatus Mycoplasma turicencis' and 'Candidatus Mycoplasma haemominutum') and canine haemoplasmas (Mycoplasma haemocanis and 'Candidatus Mycoplasma haematoparvum') was performed. A total of 347 samples were analyzed, while 16 were negative for the control GAPDH and excluded from the study. The total prevalence was 6.4% (21/331), 5.1% (17/331) for Mycoplasma Haemocanis and 1.8% (6/331) for an organism genetically similar to feline 'Candidatus Mycoplasma haemominutum' and no samples were found positive to 'Candidatus Mycoplasma turicencis' and 'Candidatus Mycoplasma haematoparvum'. The haemoplasma positive dogs lived at private homes, are old and were in contact with ectoparasites (ticks and/or fleas). Although it was identified a positive correlation between neoplasic disease, wounds caused by dog fights and the haemoplasma infection, these results were attributed to the influence of age and the vector. Hematological and biochemical variations were not identified at Mycoplasma haemocanis positive samples. This is the first study frequency of haemoplasma infection in dogs in Brazil.

Os micoplasmas hemotróficos (hemoplasmas) são organismos pleomórficos, epicelulares, gram negativos que infectam a superfície dos eritrócitos de diversas espécies. Devido ao fato de ser incultivável em meios de cultura tradicionais, o diagnóstico é baseado em técnicas moleculares. Em cães, a infecção pelos hemoplasmas pode causar anemia hemolítica na fase aguda, enquanto na doença crônica os sinais são inaparentes, sendo que a imunodepressão e a esplenectomia podem desencadear a doença aguda. Os objetivos do presente estudo foram avaliar a prevalência dos hemoplasmas em cães submetidos a atendimento clínico e cirúrgico no Hospital Veterinário da Universidade de Passo Fundo (HV-UPF), identificar os fatores de risco para infecçao pelos hemoplasmas e as condições clínicas na infecção natural. Para isso, foram selecionadas amostras de sangue com EDTA submetidas com propósito diagnóstico ao Laboratório de Análises Clínicas do HV-UPF. Após a verificação do controle da extração (PCR para o gene GAPDH), as amostras foram encaminhadas ao Department of Comparative Pathobiology, Purdue University (IN, USA) para as análises moleculares. Foi realizada reação em cadeia da polimerase (PCR) para os hemoplasmas felinos (‘Candidatus Mycoplasma turicencis’, ‘Candidatus Mycoplasma haemominutum’) e caninos (Mycoplasma haemocanis e ‘Candidatus Mycoplasma haematoparvum’). Ao total, foram analisadas 347 amostras, sendo que 16 foram negativas para o controle GAPDH e excluídas do estudo. A prevalência para hemoplasma foi de 6,4% (21/331) sendo 5,1% (17/331) para Mycoplasma haemocanis e 1,8% (6/331) para um organismo geneticamente semelhante ao hemoplasma felino ‘Candidatus Mycoplasma haemominutum’. Não foram encontradas amostras positivas para ‘Candidatus Mycoplasma turicencis’ e ‘Candidatus Mycoplasma haematoparvum’. Os cães positivos para hemoplasmas tinham como fatores de risco a presença de ectoparasitas (carrapatos e/ou pulgas), idade avançada e habitavam em casa. Embora tenha sido identificada a presença de correlação entre as neoplasias e feridas causadas por brigas com outros cães e a infecção pelos hemoplasmas, tais resultados foram atribuídos a uma influência da idade e a presença de ectoparasitas. Não houve variações hematológicas e bioquímicas em decorrência da infecção pelo Mycoplasma haemocanis. Refere-se, no presente estudo, o primeiro estudo relacionando a freqüência da infecção pelos hemoplasmas em cães no Brasil. / The hemotropic mycoplasmas (haemoplasmas) are pleomorphic epicellular and gramnegative organisms that do not grow in conventional culture media. The organisms infect the red blood cell surface of several species and nowadays the diagnosis is based on molecular techniques. In dogs, the acute infection causes severe hemolytic anemia, while in the chronic disease the clinical signs are unapparent. In addition splenectomy or immunosuppression may result in the acute disease. The aims of the present study were to evaluate the prevalence of haemoplasmas in dogs that were submitted to clinical or chirurgical procedures at the Veterinary Teaching Hospital of the University of Passo Fundo (UPF-HV), to identify the risk factors for infection and the clinical conditions of haemoplasma natural infection. EDTA blood samples that were submitted for diagnosis purpose at the Laboratório de Análises Clínicas of the HV-UPF were randomly selected and clinical data were obtained from the hospital database. After DNA extraction and the internal control, the samples were sent to the Department of Comparative Pathobiology at the Purdue University (IN, USA), School of Veterinary Medicine, for molecular analysis. A polymerase chain reaction (PCR) for feline haemoplasmas ('Candidatus Mycoplasma turicencis' and 'Candidatus Mycoplasma haemominutum') and canine haemoplasmas (Mycoplasma haemocanis and 'Candidatus Mycoplasma haematoparvum') was performed. A total of 347 samples were analyzed, while 16 were negative for the control GAPDH and excluded from the study. The total prevalence was 6.4% (21/331), 5.1% (17/331) for Mycoplasma Haemocanis and 1.8% (6/331) for an organism genetically similar to feline 'Candidatus Mycoplasma haemominutum' and no samples were found positive to 'Candidatus Mycoplasma turicencis' and 'Candidatus Mycoplasma haematoparvum'. The haemoplasma positive dogs lived at private homes, are old and were in contact with ectoparasites (ticks and/or fleas). Although it was identified a positive correlation between neoplasic disease, wounds caused by dog fights and the haemoplasma infection, these results were attributed to the influence of age and the vector. Hematological and biochemical variations were not identified at Mycoplasma haemocanis positive samples. This is the first study frequency of haemoplasma infection in dogs in Brazil.

Disease has been identified as a major problem in the aquaculture industry for the welfare of the fish stocked as well as for its economic impact. The number of diseases affecting cultured fish has increased significantly during recent years with the emergence of several conditions that have added to the overall impact of disease on the industry. Frequently, a lack of scientific knowledge about these diseases is compounded by an absence of effective treatment and control strategies. This has been the case with rainbow trout gastroenteritis (RTGE), an emerging disease of rainbow trout (Oncorhynchus mykiss Walbaum). This study investigated several aspects related to its aetiology and control. A retrospective survey of UK rainbow trout farmers was undertaken to ascertain the extent and severity of RTGE in the UK as well as to identify RTGE risk factors at the site level. Participants in this study accounted for over 85% of UK rainbow trout production in 2004. It was found that the total number of RTGE-affected sites had risen from 2 in the year 2000 to 7 in 2005. The disease was only reported from sites producing more than 200 tonnes of trout/year for the table market. Analysis of risk factors associated with RTGE at the site level showed that this syndrome was associated with large tonnage and rapid production of rainbow trout for the table market. The data collected during this study enabled the identification of those sites that were most likely to present with RTGE the following year and this information was used to study the epidemiology of RTGE at the unit level. A prospective longitudinal study was undertaken in 12 RTGE-affected UK sites. It described in detail the impact, presentation, current control strategies and spread pattern of RTGE within affected UK sites. The risk factors associated with RTGE presence and severity were also investigated. Data were collected for each productive unit (i.e. cage, pond, raceway or tank) on the mortalities, fish origin, site management and environmental factors. RTGE was identified using a case definition based on gross pathological lesions. Analysis of these data revealed that RTGE behaved in an infectious manner. This conclusion was supported by the presence of a pattern typical of a propagating epidemic within affected units. Also, the risk of an unaffected unit becoming RTGE positive was increased if it had received fish from or was contiguous to a RTGE-affected unit. The presentation also suggested an incubation period of 20-25 days. Risk factor analysis identified management and environmental risk factors for RTGE, including high feed input and stressful events, which could be used to generate a list of control strategies. A study of the histopathological and ultrastructural presentation of RTGE was conducted. The location of segmented filamentous bacteria (SFB) and pathological changes found in affected fish were examined. Pyloric caeca were the digestive organ where SFB were found more frequently and in higher numbers, suggesting that this was the best location to detect SFB in RTGE-affected trout. Scanning and transmission electron microscopy revealed a previously undescribed interaction of SFB with the mucosa of distal intestine and pyloric caeca and this included the presence of attachment sites and SFB engulfment by enterocytes, as previously described in other host species. The SFB were not always adjacent to the pathological changes observed in the digestive tract of RTGE-affected trout. Such changes included cytoskeletal damage and osmotic imbalance of enterocytes, with frequent detachment. These observations suggested that if SFB are indeed the cause of RTGE their pathogenesis must involve the production of extracellular products. Analysis of the gross presentation and blood biochemistry in RTGE-affected fish was used to examine the patho-physiologic mechanisms of RTGE. To enable identification of positive RTGE cases for this study, a case definition was created from the information available on RTGE gross presentation in the literature. This case definition was assessed in a sample including 152 fish cases and 152 fish controls from 11 RTGE-affected UK sites, matched by unit of origin. The analysis of these fish using bacteriology, packed cell volume (PCV) and histopathology revealed that RTGE occurred simultaneously with other parasitic and bacterial diseases in a percentage of fish identified with this case definition. With the information gained after analysing the gross presentation, RTGE-affected fish without concurrent disease were selected for the study of the pathogenesis, which included blood biochemical analyses. These analyses revealed a severe osmotic imbalance, and a reduced albumin/globulin ratio suggesting selective loss of albumin, typical for a protein losing enteropathy. The role of the SFB “Candidatus arthromitus” in the aetiology of RTGE was assessed using a newly developed “C. arthromitus”-specific polymerase chain reaction assay (PCR) in conjunction with histological detection. This technique was applied to eight different groups of trout, including an RTGE-affected group and seven negative control groups. This analysis was conducted on DNA extracted from paraffin wax-embedded tissues as well as fresh intestinal contents. The results revealed the presence of “C. arthromitus” DNA in apparently healthy fish from sites where RTGE had never been reported. Additionally, SFB were observed histologically in two trout from an RTGE-free hatchery. These findings do not permit the exclusion of “C. arthromitus” as the aetiological agent for RTGE, although they suggest that the presence of these organisms in the digestive system of healthy trout is not sufficient to cause clinical disease, and therefore other factors are necessary. In conclusion, this study has used a multidisciplinary approach to the study of RTGE which has generated scientific information related to the epidemiology, pathogenesis and aetiology of this syndrome. The results of this project have suggested priority areas where further work is required, including experimental transmission of RTGE, field assessment of the control strategies proposed and further investigation into the aetiology of RTGE.

Submitted by Simone Souza (simonecgsouza@hotmail.com) on 2017-10-17T13:31:29Z No. of bitstreams: 1 DISS_2014_Alvair da Silva Alves.pdf: 1886387 bytes, checksum: 3e47dd34fe738b31c6e8fbbb7f127b27 (MD5) / Approved for entry into archive by Jordan (jordanbiblio@gmail.com) on 2017-11-07T15:02:07Z (GMT) No. of bitstreams: 1 DISS_2014_Alvair da Silva Alves.pdf: 1886387 bytes, checksum: 3e47dd34fe738b31c6e8fbbb7f127b27 (MD5) / Made available in DSpace on 2017-11-07T15:02:07Z (GMT). No. of bitstreams: 1 DISS_2014_Alvair da Silva Alves.pdf: 1886387 bytes, checksum: 3e47dd34fe738b31c6e8fbbb7f127b27 (MD5) Previous issue date: 2014-03-12 / CAPES / O objetivo do estudo foi estimar a infecção Rickettsial ( Rickettsia rickettsii , Rickettsia parkeri , ' Candidatus R. amblyommii ' , Rickettsia rhipicephali e Rickettsia bellii ) em eqüídeos , e carrapatos de uma região do Pantanal do Brasil. Amostras de 547 eqüídeos (500 cavalos e 47 asininos e muares ) foram avaliados pelo teste de imunofluorescência indireta (IFI ) . Um total de 665 adultos e 106 “pools” de ninfas de Amblyomma cajennense F.s1 , 10 carrapatos Dermacentor nitens Neumann, e 88 pools de larvas de Amblyomma sp. foram testadas por PCR . No geral 337 ( 61,6 % ) eram reactivos equídeos ( título ≥ 64 ) para pelo menos um antigénio de Rickettsia spp . Os valores de prevalência de Rickettsia foram 66%, e foram observados os maiores títulos de ponto final para 'Ca. R. amblyommii '. Na PCR, 3 ( 0,45% ) do fêmeas de A. cajennense s.l. foram positivos para 'Ca. R. amblyommii ' . Para os carrapatos imaturos foram observados uma taxa mínima de infecção de 0,75% e 0,34% para ninfas e larvas, respectivamente. As amostras positivas de carrapatos tiveram um fragmento do gene 16S rRNA sequenciados e as sequências apresentaram 99% de semelhança com Amblyomma sculptum Berlese . Este estudo relata uma ampla distribuição de Rickettsia entre equídeos, sugerindo o possível envolvimento, pela primeira vez, de A. sculptum na transmissão de 'Ca. R. amblyommii ' / The aim of the study was to estimate the rickettsial (Rickettsia rickettsii, Rickettsia parkeri, ‘Candidatus R. amblyommii’, Rickettsia rhipicephali, and Rickettsia bellii) infection in equids, and ticks of a Pantanal region of Brazil. Sera of 547 equids (500 horses and 47 mules, and donkeys) were evaluated by indirect immunofluorescence assay (IFA). A total of 665 adults and 106 nymphal pools of Amblyomma cajennense F. s.l., 10 Dermacentor nitens Neumann ticks, and 88 larval pools of Amblyomma sp. were tested by PCR. Overall 337 (61.6%) equids were reactive (titer ≥ 64) to at least one antigen of Rickettsia spp. The prevalence values for Rickettsia were 66%, and the highest endpoint titers were observed for ‘Ca. R. amblyommii’. In PCR 3 (0.45%) female of A. cajennense s.l. were positive for ‘Ca. R. amblyommii’. For the immature ticks were observed a minimum rate of infection of 0.75% and 0.34 % for nymphs and larvae, respectively. Positive samples of ticks have had a fragment of the 16S mitochondrial rRNA gene sequenced and sequences showed 99% similarity to Amblyomma sculptum Berlese. This study reports a wide distribution of Rickettsia among equids, suggesting the possible involvement, for the first time, of A. sculptum in transmitting ‘Ca. R. amblyommii’.

Orientador: Antonio de Goes / Banca: Margarete Camargo / Banca: Gener Tadeu Pereira / Banca: Renato Beozzo Bassanezi / Banca: Edson Luiz Furtado / Resumo: Para o estudo da viabilidade do emprego de metodologias de sistema de informação geográfica, geoestatística e redes neurais foram desenvolvidos dois ensaios. O primeiro visou a modelagem da evolução espaço-temporal da incidência do Huanglongbing ao longo dos anos de 2004, 2007 e 2008 em cinco grupos de idade (0 a 2 anos, 3 a 5 anos, 6 a 10 anos, mais de 10 anos, todas as idades), por meio da técnica geoestatística da krigagem e da técnica de inteligência artificial de rede neurais do tipo perceptron de múltiplas camadas com topologia 3x10x10x1, treinada pelo algoritmo da propagação elástica do erro. Neste ensaio foi ainda realizada a análise do modelo do semivariograma, cálculo da média zonal dos talhões dentro de cada faixa de idade e mesorregião do estado de São Paulo, e finalmente, foi previsto o padrão espacial da incidência da doença para o ano de 2009 pelas redes neurais. O segundo ensaio consistiu em se verificar o efeito do alinhamento de plantio na severidade da mancha preta dos citros e sua implicação na qualidade do suco e produção. Neste ensaio foram selecionados talhões distribuídos ao longo do cinturão citrícola paulista com diferentes alinhamentos de plantio, onde foram analisadas as variáveis supracitadas nas linhas de plantio e nas faces expostas da planta. / Abstract: For viability study of using geographic information systems, geostatistics and neural networks two experiments were carried out. The first one was focused on modeling the spatial-temporal progress of Huanglongbing incidence in 2004, 2007 and 2008 on five age groups (0 - 2 years old, 3 - 5 years old, 6 - 7 years old, more than 10 years old and all ages) using the geostatistical technique of kriguing and the artificial intelligence technique of neural networks of multi-layer perceptron type with 3x10x10x1 topology, trained by resilient error propagation. Complementing the study the analysis of semivariogram model, zonal mean calculation of blocks on each age group were realized inside the mesoregions of São Paulo state and finally the disease incidence spatial pattern for 2009 was forecasted by the neural networks. The objective of the second experiment was verifying effect of planting alignment on citrus black spot severity and its implication on juice quality and production. On this experiment was selected blocks distributed among the São Paulo state citrus belt with different planting alignments, where was analyzed those variables on the lines and exposed faces. / Doutor

No description available.

The public health and veterinary importance of Gulf Coast ticks, Amblyomma maculatum Koch (1844) have become more apparent during the last several decades. In addition, new records of this three-host ixodid tick presently show a geographic distribution throughout much of the southern United States. Rickettsia parkeri, a spotted fever group rickettsia (SFGR) that is commonly found infecting the Gulf Coast tick, was only recently recognized as a human pathogen. Over the last decade, more than 20 human cases of disease caused by R. parkeri have been recognized in the Americas, all of which were similar in presentation to mild Rocky Mountain spotted fever. In addition, a novel, poorly characterized SFGR, “Candidatus Rickettsia andeanae”, was recently identified in A. maculatum from Peru, United States, Chile and Argentina. As the recognition of R. parkeri as a pathogen and “Ca. R. andeanae” as an additional SFGR in A. maculatum only recently occurred, a general gap exists in our understanding of the biology of these SFGRs. The overall objective of this dissertation was to contribute to our knowledge of SFGR infecting A. maculatum. In Chapter 3, we present a prevalence study of R. parkeri, and “Ca. R. andeanae” in A. maculatum from Mississippi where we detected 15.2% R. parkeri-singly infected ticks and 3.1% total “Ca. R. andeanae” infected ticks of which 1.7% were co-infected with R. parkeri. In Chapter 4, we discuss finding four genetically different populations of A. maculatum from Mississippi infected with a homogenous population of R. parkeri, using Single Strand Conformation Polymorphism analysis. Those initial data relating to “Ca. R. andeanae” provided a foundation for studies described in Chapters 5 and 6. We report the first morphological study of “Ca. R. andeanae” using transmission electron microscopy in Chapter 5 and isolation of this SFGR in ,A. maculatum cell co-culture in Chapter 6. We anticipate that results presented in this dissertation will contribute to our understanding of the ecology of ,A. maculatum as a vector for the human pathogen, R. parkeri, and increase the current understanding of both R. parkeri and “Ca. R. andeanae” in A. maculatum.

Little is understood about off-host behavior and ecology of immature Amblyomma maculatum Koch (Gulf Coast tick). A more complete understanding of this tick is essential to protect human and animal health. My research focused on seasonality and distribution of immatures in Mississippi, potential suitability of some insect and human hosts to larvae, and aspects of nymphal questing behavior. A single larva was collected (third off-host collection reported) when sampling A. maculatum habitat using a novel device. Collection of this larva in November expands the stage’s known seasonality and confirmed a prediction concerning seasonality of larval A. maculatum. Low frequency of immatures (8.3%) confirmed that they’re incredibly difficult to collect off-host. Nymphal collections peaked in March, and known seasonality was extended for both nymphs and adults. I examined known records, elucidating seasonality and distribution of A. maculatum in Mississippi. Either multiple generations per year or diapause are responsible for observed bi-modal distribution of immature collections. Additionally, I compiled the most extensive host record of immature A. maculatum in Mississippi and investigated seasonality patterns using USDA plant hardiness zones. I compiled the most complete record of ticks found on arthropods. Amblyomma americanum and A. maculatum were both confirmed to crawl onto arthropods, giving support to occasional, unintentional dispersal by phoresy. There was no conclusive evidence that larval A. maculatum feed on arthropods, however data supported feeding by larval A. americanum. These results have interesting implications regarding evolution of pathogens/endosymbionts. I provided the first evidence that larval A. maculatum can attach to humans. Rickettsia parkeri, a human pathogen transmitted by this species has recently been shown to be capable of transovarial transmission. Therefore, larval A. maculatum may provide another avenue of transmission. I have demonstrated that A. maculatum are difficult to collect off-host in part because they prefer to quest low to the ground. In choice studies, 5-cm-tall stems were most likely to be occupied by nymphs released into an array of stems. Low vapor pressure deficit encouraged questing, while higher VPD and warmer temperature increased questing height. These results may have implications in understanding host-seeking behavior in other tick species as well.