Orientador: Kleber Gomes Franchini / Tese (doutorado) - Universidade Estadual de Campinas, Faculdade de Ciências Médicas / Made available in DSpace on 2018-08-20T13:11:14Z (GMT). No. of bitstreams: 1 Antunes_MichelleBuenodeMouraPereira_D.pdf: 4387492 bytes, checksum: bf7a9e478bc9627b01a4e45548a6f170 (MD5) Previous issue date: 2012 / Resumo: Diversos tipos celulares respondem ao estresse mecânico ativando sinais que culminam com remodelamento e sobrevivência. O estresse mecânico pode atuar como agente modulador da homeostase celular e de numerosos processos patológicos. Evidências sugerem que a Quinase de Adesão Focal (FAK) medeia a resposta de miócitos cardíacos ao estresse mecânico. Contudo, os mecanismos moleculares que regulam a função da FAK ainda não são totalmente conhecidos. No presente trabalho foi demonstrado que a small heat shock protein ?B-Cristalina interage de forma direta e protege a FAK da degradação pela calpaína 2. Ensaios de pull down, cross-linking acoplado a espectrometria de massas, mutagênese sítio dirigida, docking e modelagem molecular demonstraram que as ?-hélices 1 e 4 do domínio FAT da FAK interage no sítio de ligação constituído pelas folhas ?4 e ?8 da ?B-Cristalina. Os dados funcionais e estruturais obtidos indicaram que ocorre um aumento da associação da ?B-Cristalina e o domínio FAT da FAK após mudanças conformacionais associadas com a fosforilação dependente de Src da tirosina 925. Experimentos de pull down demonstraram que a associação com a ?B-Cristalina protege a FAK da proteólise mediada pela calpaína 2. Miócitos cardíacos submetidos ao silenciamento gênico da ?B-Cristalina apresentaram uma menor quantidade de FAK detectada em 125 KDa, indicando que esta interação protege FAK da proteólise. A submissão dessas células ao estiramento cíclico revelou uma maior taxa de morte celular por apoptose, sendo que a superexpressão da FAK restaurou a viabilidade celular. Os achados deste trabalho indicam que o complexo formado entre FAK e ?B-Cristalina apresenta papel fundamental na proteção da FAK da proteólise durante o estresse mecânico, sendo importante na manutenção da sobrevivência celular / Abstract: Cell types of diverse function respond to mechanical stress by triggering downstream signals for remodelling and survival. As such, mechanical stress impacts organismal homeostasis and numerous pathologic processes. Evidence suggests that focal adhesion kinase (FAK) mediates the responses of myocytes to mechanical stress, yet the molecular mechanisms to regulate FAK function are unclear. We find that FAK is recognized and protected from calpain-induced degradation by the small heat shock protein alpha-B crystalline (CryAB). A model based in the pull down, crosslinking technology coupled with mass spectrometry, site-directed mutagenesis, molecular docking and molecular modeling indicated that a cleft formed by ?4 and ?8 sheets of ?B-Crystalline is critical to the interaction with ?-helix 1 and ?-helix 4 of FAK. Functional and structural data indicated that CryAB binds directly the FAT domain of FAK upon changes in conformation associated with Src-dependent phosphorylation of tyrosine 925 induced by cell stretch. Pulldown assay indicated that ?B-Crystalline interacts and protects from calpain-induced degradation FAK. Cardiomyocytes depleted of CryAB show reduced FAK quantity detected in 125KDa, indicating that this interaction protects degradation of FAK. The submission of such cells to stretch cyclic revealed a higher rate of cell death via apoptosis, whereas restoration of FAK expression restored cell viability. Our findings highlight a new role for CryAB in forming a complex with FAK that is essential for regulating cardiomyocyte survival in response to mechanical stress / Doutorado / Biologia Estrutural, Celular, Molecular e do Desenvolvimento / Doutor em Ciências

Idiopathic Pulmonary Fibrosis (IPF) is a deadly disease of unknown origin, which causes 80,000 deaths every year in the US and Europe combined. Unknown etiology and late diagnosis, combined with limited treatment options, contribute to a dismal survival rate of 3-5 years post diagnosis. Although molecular mechanisms underlying IPF pathogenesis and progression have been studied for over two decades, lack of in vivo models that recapitulate chronic, progressive, and irreversible nature of IPF have contributed to limited therapeutic success in clinical trials. Currently, only two drugs, Pirfenidone and Nintedanib, are approved for IPF treatment in the US, with their efficacy yet to be completely determined. Patients with IPF often observe lung infections, alveolar collapse, and respiratory failure, which are associated with focal edema and local hypoxia and contribute to development of hypoxemia associated with acute exacerbation of IPF (AE-IPF). In my thesis, I posit that hypoxic injury to the lung epithelium can initiate profibrotic signaling that can contribute to pathogenesis and progression of pulmonary fibrosis in vitro and in vivo. In my in silico studies, I analyzed human protein kinases to identify structural peculiarities that diversify their functions and highlight central hub kinases governing cell signaling. Using this approach, I identified Focal Adhesion Kinase 1 (FAK1) as a central hub kinase contributing to cytoskeletal remodeling. My proteomics and transcriptional studies defined in vitro effect of hypoxia in activation of lung epithelial cells. Using systems biology approaches, I identified interplay between transforming growth factor – β (TGF–β) signaling, hypoxia signaling, and FAK1 signaling. Further, my studies identified Galectin-1 as a novel mediator of hypoxia-induced pulmonary fibrosis. To mimic exacerbation of PF in patients, I developed a novel mouse model of exacerbated pulmonary fibrosis using subclinical bleomycin injury with chronic hypoxia. Further, to fill the existing requirement of an in vivo model of chronic PF, I characterized a triple transgenic mouse model that conditionally activates hypoxia signaling in the lung epithelial cells and causes progressive PF over a span of 12 weeks. Lastly, I performed RNA-Seq experiments on primary AEC2s isolated from our transgenic mouse model to identify a hypoxia-mediated profibrotic role of microRNA-96 in down-regulation of PTEN, a tumor suppressor and anti-fibrotic protein. In conclusion, my studies established in vitro and in vivo roles of hypoxia in profibrotic activation of lung epithelium and identifies FAK1 and Gal-1 as key drivers of hypoxia-mediated fibrosis, which should be further evaluated in animal and human studies to determine their therapeutic potential.

No description available.

京都大学 / 0048 / 新制・課程博士 / 博士(医学) / 甲第21447号 / 医博第4414号 / 新制||医||1032(附属図書館) / 京都大学大学院医学研究科医学専攻 / (主査)教授 武藤 学, 教授 平井 豊博, 教授 岩田 想 / 学位規則第4条第1項該当 / Doctor of Medical Science / Kyoto University / DFAM

No description available.

Le but de la conception d’un biomatériau est de mimer les modèles qui puissent être représentatifs de la matrice extracellulaire (MEC) existant in vivo. Cet objectif peut être atteint en associant une combinaison de cellules et des facteurs biologiques à un biomatériau sur lequel ces cellules peuvent se développer pour reconstruire le tissu natif. Dans cet étude, nous avons crée des surfaces bioactives nanostructurées en combinant la nanolithographie et la fonctionnalisation de surface, en greffant un peptide RGD ou BMP-2 (bone morphogenetic protein 2). Nous avons étudié l’effet de cette nanodistribution sur le comportement des cellules souches mésenchymateuses en analysant leur adhésion et différentiation. Nous notons que la nanodistribution des peptides induit une bioactivité qui a un impact sur l’organisation du cytosquelette, la conformation des fibres de stresse de l’actin, la maturation des adhésions focales (AFs), et le commitment des cellules souches. En particulier, l’aire, la distribution, et la conformation des AFs sont affectes par la présence des nanopatterns. En plus, le RGD et le BMP-2 changent le comportement cellulaire par des voies et des mécanismes différents en variant l’organisation des cellules souches et la maturation de leurs AFs. La nanodistribution influence de façon évidente les cellules souches en modifiant leur comportement (adhésion et différenciation) ce qui a contribué et ce qui contribuera à améliorer la compréhension des interactions des cellules avec la MEC. / The aim of biomaterials design is to create an artificial environment that mimics the in vivo extracellular matrix for optimized cell interactions. A precise synergy between the scaffolding material, bioactivity, and cell type must be maintained in an effective biomaterial. In this work, we present a technique of nanofabrication that creates chemically nanopatterned bioactive silicon surfaces for cell studies. Using nanoimprint lithography, RGD and mimetic BMP-2 peptides were covalently grafted onto silicon as nanodots of various dimensions, resulting in a nanodistribution of bioactivity. To study the effects of spatially distributed bioactivity on cell behavior, mesenchymal stem cells (MSCs) were cultured on these chemically modified surfaces, and their adhesion and differentiation were studied. MSCs are used in regenerative medicine due to their multipotent properties, and well-controlled biomaterial surface chemistries can be used to influence their fate. We observe that peptide nanodots induce differences in MSC behavior in terms of cytoskeletal organization, actin stress fiber arrangement, focal adhesion (FA) maturation, and MSC commitment in comparison with homogeneous control surfaces. In particular, FA area, distribution, and conformation were highly affected by the presence of peptide nanopatterns. Additionally, RGD and mimetic BMP-2 peptides influenced cellular behavior through different mechanisms that resulted in changes in cell spreading and FA maturation. These findings have remarkable implications that contribute to the understanding of cell-extracellular matrix interactions for clinical biomaterials applications.

The ERK signalling cascade comprised of protein kinases Raf, MEK and ERK is an evolutionarily conserved member of MAPK family that is activated in response to wide range of extracellular stimuli. The ERK pathway controls fundamental cellular functions including cell proliferation, differentiation, apoptosis or cell motility. To control such a diverse cellular responses by a single pathway cells have evolved regulatory mechanisms that channel the extracellular signals towards the specific biological response. Crucial to this control are non- enzymatic proteins termed scaffolds that associate with and enhance functional interaction of the components of MAPK pathways and can regulate amplitude, timing, specificity and location of signals. Scaffold protein RACK1 associates with several components of cell migration machinery including integrins, FAK, Src and the ERK pathway core protein kinases. RACK1 regulates distinct steps of cell migration such as establishment of cell polarity and focal adhesion turnover, however, the molecular mechanism by which RACK1 regulates these processes remains largely unknown. The main aim of this study was to investigate the functional role of RACK1 in cell motility, in particular to identify new effector proteins utilized by the ERK pathway and RACK1 in the regulation of...

INTRODUÇÃO: A ventilação mecânica é uma terapia importante, mas com possíveis complicações. Uma das mais relevantes é a lesão pulmonar induzida pelo ventilador (VILI do inglês Ventilator-induced lung injury). Devido à hiperdistensão alveolar, o pulmão inicia um processo inflamatório, com infiltrado neutrofílico, formação de membrana hialina, fibrogênese e prejuízo de troca gasosa. Nesse processo, a mecanotransdução do estímulo da hiperdistensão celular se faz através do citoesqueleto da célula e de suas interações com a matriz extracelular e com as células vizinhas. Apesar desse papel fundamental no processo da VILI, não existem estudos in vivo sobre as alterações do citoesqueleto e de suas proteínas associadas durante esse processo patológico. O objetivo desse estudo foi descrever as alterações no citoesqueleto e em duas de suas principais proteínas associadas (FAK e paxilina) durante esse processo. MÉTODOS: Nesse estudo experimental foram feitos três grupos (n = 4 6): um controle e dois ventilados por quatro horas com PEEP de 5 cmH2O. Um grupo foi ventilado com volume corrente de 8 ml/kg (BV) e o outro com 24 ml/kg (AV). Dados de mecânica respiratória foram calculados no início e no final do período experimental. Os pulmões foram avaliados por histomorfometria quanto à área proporcional de parênquima, índice de infiltrado neutrofílico e índice de edema perivascular, quanto à quantidade de fosfo-FAK, fosfo-paxilina, paxilina total, actina músculo liso e alfa-tubulina por Western Blot, quanto à imunofluorescência para paxilina total com microscopia confocal a laser e com microscopia eletrônica de transmissão. RESULTADOS: os grupos foram semelhantes nas características basais. Houve aumento da elastância dinâmica (Edin) no grupo BV e redução no grupo AV (Edin inicial e final: 0,76 ± 0,4 vs 1,02 ± 0,47 respectivamente, em cmH2O/ml; p = 0,001). Não houve diferença na área proporcional de parênquima ou índice de edema perivascular entre os grupos estudados. A ventilação mecânica induziu infiltrado neutrofílico pulmonar nos animais, tanto no grupo BV como no AV em relação ao controle (p < 0,001). O infiltrado foi mais importante no grupo AV que no BV (p = 0,003). Houve um aumento de 40% na fosfo-FAK pelo Western Blot no grupo AV em relação ao controle (p=0,069) e aumento significativo de fosfo-paxilina no grupo AV em relação ao controle (p<0,001) e ao BV (p<0,001). Não se observaram diferenças para paxilina total, actina músculo liso e alfa-tubulina. A microscopia confocal demonstrou marcação para paxilina total nos septos alveolares. A microscopia eletrônica sugeriu reorganização do citoesqueleto nas zonula adherens do grupo AV. CONCLUSÕES: A ventilação mecânica promove lesão pulmonar com infiltrado neutrofílico numa relação dose-dependente. A ventilação com alto volume corrente promove fosforilação da FAK e de paxilina. As alterações no citoesqueleto em modelo in vivo de VILI são possíveis de serem descritas utilizando-se de métodos de microscopia confocal, Western Blot e microscopia eletrônica. / INTRODUCTION: Mechanical ventilation is an important therapy, but is associated with complications. One of the most relevant is ventilator-induced lung injury (VILI). Due to alveolar hyperdistension, the lung initiates an inflammatory process, with neutrophilic infiltration, hyaline membrane formation, fibrogenesis and gas exchange impairment. In this process, cellular mechanotransduction of the overstretching stimulus is mediated through the cytoskeleton and its cell-cell and cell-matrix interactions. But, although the cytoskeleton has this important role in the pathogenesis of VILI, there are no in vivo models for the research of cytoskeletal and cytoskeleton-associated proteins modifications during this pathological process. Our objective was to describe the immunohistochemical modifications during this process on the cytoskeleton and on two of its associated proteins (FAK and paxillin). METHODS: in this experimental study, three groups (n = 4 6) were studied: a control group and two ventilated for four hours with PEEP of 5 cmH2O. One group was ventilated with tidal volume of 8 mL/kg (LV) and the other with 24 mL/kg (HV). Data of respiratory mechanics were obtained at the beginning and the end of the experimental period. The lungs were evaluated with histomorphometry for parenchymal proportional area, neutrophilic infiltrate and perivascular edema, with Western Blot for phospho-FAK, phospho-paxillin, total paxillin, alpha-smooth muscle actin and alpha-tubulin, with confocal laser scanning microscopy for total paxillin, and with transmission electron microscopy. RESULTS: the groups were similar at the baseline. Dynamic elastance (Edin) increased in LV group and decreased in HV group (Edin initial to final: 0.76 ± 0.4 vs. 1.02 ± 0.47 respectively, in cmH2O/ml; p = 0.001). There was no difference in the parenchymal proportional area or the perivascular edema in the three groups. Mechanical ventilation induced pulmonary neutrophilic infiltration, both in the LV group and the HV group in comparison with control (p < 0.001). The infiltrate was more important in the HV group than in the LV group (p = 0.003). Phospho-FAK increased 40% in the HV group in Western Blot in comparison with control (p=0.069). Phosphopaxillin increased significantly in HV group compared with control (p<0.001) and with LV (p<0.001). Total paxillin, alpha-smooth muscle actin and alpha-tubulin did not show any differences. Confocal microscopy showed total paxillin labeling at alveolar septa. Electron microscopy suggested cytoskeleton reorganization at the zonula adherens in the AV group. CONCLUSIONS: Mechanical ventilation induces pulmonary injury with neutrophilic infiltrate in a dose-dependent relationship. Ventilation with high tidal volume promotes FAK and paxillin phosphorilation. The alterations in cytoskeleton in an in vivo model of VILI are possible to be studied with confocal microscopy, Western Blot and electron microscopy.

<p>Protein tyrosine kinases play an important role in the regulation of various cellular processes such as</p><p>growth, differentiation and survival. GTK, a novel SRC-like cytoplasmic tyrosine kinase, was recently cloned from a mouse insulinoma cell line and the present work was conducted in order to find a biological function of GTK in insulin producing and neuronal cells. It was observed that kinase active GTK-mutants, expressed in RINm5F cells, transferred to the cell nucleus and increased the levels of the cell cycle regulatory protein p27^KIP1, reduced cell growth and stimulated glucagon mRNA expression. Furthermore, wild type GTK induces neurite outgrowth in the rat adrenal pheochromocytoma PC12 cell line, through activation of the RAP1-pathway, suggesting a role of GTK for cell differentiation. Studies using transgenic mice, expressing GTK under the control of the rat insulin 1 promoter, demonstrated a dual role of GTK for β-cell growth: Whereas GTK increases the β-cell mass and causes enhanced β-cell proliferation in response to partial pancreatectomy it also induced β-cell death in response to proinflammatory cytokines and impaired the glucose tolerance in mice treated with the β-cell toxin streptozotocin suggesting a possible role of GTK for β-cell destruction in Type 1 diabetes. We have also observed that GTK-transgenic islets and GTK-expressing RINm5F cells exhibit a reduced insulininduced activation of the insulin receptor substrate (IRS-1 and IRS-2)-pathways, partly due to an increased basal activity of these. GTK was found to associate with and phosphorylate the SH2 domain adapter protein SHB, which could explain many of the GTK-dependent effects both in vitro and in vivo. In summary, the present work suggests that the novel tyrosine kinase GTK is involved in various signal transduction pathways, regulating different cellular responses, such as proliferation, differentiation and survival.</p>

<p>Angiogenesis, de novo synthesis of blood vessels from the pre-existing vasculature, is required both during embryonic development and in pathophysiological conditions. In particular, tumor growth needs new capillary vessels in order to both deliver oxygen and nutrients and to remove toxin and metabolites. Growth of most solid tumors would be restricted to a microscopic size in the absence of neovascularization. Angiogenesis ensues as a result of a shift in the balance between pro- and anti-angiogenic molecules.</p><p>Histidine-rich glycoprotein (HRGP) is a heparin-binding plasma protein. We showed that HRGP inhibits endothelial cell migration and adhesion to vitronectin. As a consequence, HRGP attenuates growth and vascularization of mouse model tumors. The anti-angiogenic effect of HRGP is mediated by the central histidine/proline (His/Pro)-rich domain, which must be released from the parent molecule to exert its effect. A 35-amino acid residue peptide denoted HRGP330, derived from the His/Pro-rich domain, was identified as a minimal active anti-angiogenic domain of HRGP. HRGP330 induces disruption of molecular interactions required for cell motility, such as the integrin-linked kinase/paxillin complex. Moreover, HRGP330 inhibits VEGF-induced tyrosine phosphorylation of α-actinin, a focal adhesion kinase (FAK) substrate. Consequently, the motility of endothelial cells is arrested. By use of a signal transduction antibody array, we identified FAK, paxillin and growth factor receptor-bound 2 (Grb2) as tyrosine phosphorylated in HRGP330-treated cells. We confirmed that HRGP targets focal adhesions in endothelial cells, thereby disrupting the cytoskeletal organization and the ability of endothelial cells to assemble into vessel structures. A critical role of FAK in HRGP-inhibition of angiogenesis was validated using a FAK inhibitor, geldanamycin, which allowed rescue of endothelial cell actin rearrangement.</p><p>We identified another potential mechanism in the HRGP/HRGP330 anti-angiogenic effects, exerted through regulation of tumor-associated macrophages (TAMs). HRGP/HRGP330 treatment led to reduced TAM infiltration, which in turn caused a marked decrease in VEGF and MMP-9 levels in the tumor. </p><p>Taken together, our present studies show that HRGP/HRGP330 target endothelial cell adhesion, migration, focal adhesions, and furthermore, that HRGP is involved in regulation of macrophage infiltration.</p>