The primary focus of my work is the application of informatics methods to the fields of materials science and analytical chemistry. The statistical analysis of data has become increasingly important in understanding the properties of materials and analytes. Statistical methods like principal component analysis (PCA) and multivariate curve resolution (MCR) are widely used for analysis in chemistry and other fields given their ability to categorize spectra in an unsupervised way. PCA is relatively easy to apply and has appealing mathematical properties. However, the results can be challenging to interpret, even for experienced users. In contrast, MCR results can be more interpretable, because the factors resemble real spectra and do not have negative scores or loadings. Nevertheless, the useful orthogonality properties of the scores and loadings in PCA are sacrificed in doing so. Other statistical analysis methods like cluster analysis and partial least squares regression (PLS-R) present their own challenges. Pattern recognition entropy (PRE) is a novel application of Shannon’s information theory for understanding the underlying complexity in spectra. Unlike PCA and MCR, PRE is a summary statistic that adopts the mathematical quantification of information and applies it for chemometric analysis. PRE values reflect the shape and complexity of spectra. Chapter 1 contains a description of the analytical methods/instruments that provided the data I analyzed by PRE and other informatics tools, including (i) X-ray photoelectron spectroscopy (XPS) and time-of-flight secondary ion mass spectrometry (ToF-SIMS) and (ii) liquid chromatography-mass spectrometry (LC-MS) and capillary electrophoresis (CE), (iii) a discussion of some of the commonly used statistical analysis tools like PCA, MCR, cluster analysis and PLS-R, and (iv) a description of PRE. Chapter 2 describes in much greater detail the theory associated with the statistical tools I used and PRE. Chapter 3 describes the PRE and informatics analysis of depth profiles through thin films by XPS and ToF-SIMS. Chapter 4 introduces the concept of the ‘reordered spectrum’ as an intuitive, visual representation of spectra to address the abstraction associated with PRE result. Total ion current chromatograms (TICCs) generated using LC-MS are often extremely complex and ‘noisy’. Chapter 5 describes the application of PRE as a variable reduction method for producing higher quality TICCs. Chapter 6 discusses the limitations associated with the application of PRE to TICCs and presents a new method using cross-correlation (CC) in conjunction with a PRE analysis. Chapter 7 discusses a new methodology that uses CE and PRE to detect autologous blood doping (ABD). Chapter 8 presents my conclusions of this present work and discusses the scope of future work on PRE. The thesis also contains several appendices. Appendix 1 introduces polyallylamine (PAAm) as a simple, easy-to-apply adhesion promoter for the widely used photoresist SU-8. Appendices 2, 3 and 4 contain articles I wrote that relate to trends in modern XPS instrumentation and 5-8 contain supplemental information relating to Chapters 3, 4, 5, and 7 respectively.

The research presented in this dissertation is focused on the construction of complex molecular structures on planar gold and silicon dioxide surfaces using a variety of surface modification techniques, along with thorough surface characterization at each modification step. The dissertation is structured into six separate chapters. In Chapter 1, an introduction to the importance and implications of molecular level surface modification, commonly employed surface modification methods, and available surface characterization techniques is presented. Chapter 2 shows applications of novel methodologies for the functionalization of gold surfaces using alkane dithiol self-assembled monolayers and thiol-ene click chemistry. The resulting functionalized gold substrates demonstrate higher chemical stability than alkanethiol self-assembled monolayers alone and allow spatially controlled functionalization of gold surfaces with light. In Chapter 3, work on tunable hydrophobic surfaces is presented. These surfaces are prepared using a combination of organosilane chemistry, layer-by-layer polyelectrolyte deposition, and thiol-ene chemistry. These hydrophobic surfaces demonstrate high mechanical and chemical stability, even at low pH (1.68). The pinning of water droplets could be tuned on them by the extent of their thermal treatment. Comprehensive surface characterization using X-ray photoelectron spectroscopy (XPS), time-of-flight secondary ion mass spectrometry (ToF-SIMS), spectroscopic ellipsometry, atomic force microscopy, and water contact angles was carried out on the molecular assemblies prepared on gold and silicon dioxide surfaces. Chapters 4 and 5 are focused on the application, data interpretation, and enhancement in sensitivity of different surface characterization methods. In Chapter 4, XPS, ToF-SIMS, and principal components analysis are used to probe a real world corrosion-type problem. This systemic study showed the destruction of a protective coating composed of a nitrilotris(methylene)triphosphonic acid by a low-intensity fluorine plasma. In Chapter 5, enhancement in ToF-SIMS signals is shown via bismuth metal deposition. These surfaces are also probed by spectroscopic ellipsometry using the interference enhancement method. Finally, Chapter 6 concludes this dissertation by describing possible future work.

There is plenty of support for local musicians in Austin. It ranges from providing health benefits to receiving home loans to equipment insurance. The live music capital of the world has provisions for recording artists as well as street performers whose primary source of income is music. These facilities go a long way in maintaining Austin‟s identity as one of the major music cities in the world. They also bring together members of this community for benefits that help strengthen the local music industry, which has been an important part of the city‟s economy for several years. / text

La2Mo2-yWyO9 (y = 1.0 to 2.0) oxides were synthesized by conventional solid state route and studied by XRD, TC-XRD and DTA. A phase diagram of the series was proposed. The thermodynamically stable phases at room temperature are: for 1.0≤ y ≤1.2 a cubic β-La2Mo2O9 type solid solution, for 1.3≤ y ≤1.575 a biphasic mixture of β-La2Mo2O9 type + α-La2W2O9 type phases, and for 1.6≤ y ≤2.0 a triclinic α-La2W2O9 type solid solution. Inhomogeneous distribution of W is suspected in the biphasic samples. It is clear that the compounds above y =1.2 are not suitable for SOFC applications.Cationic diffusion studies were performed using SIMS on La2Mo2O9 (LMO)/La0.8Sr0.2MnO3-δ (LSM) annealed couples. Rod shaped LaMnO3 grains were observed on LMO pellet and SrMoO4 type phases were seen to be growing on LSM pellet. Hypotheses for possible reaction mechanisms are presented. Bulk diffusion coefficients of Sr and Mn in LMO and of Mo in LSM are extrapolated to be around 1x10-20 cm2.s-1 and 1x10-15 cm2.s-1, respectively, at 800oC. Similar diffusion studies were performed by depositing Mn and Sr cation rich solutions on LMO pellets and Mo rich solution on LSM pellet. Mn solution was observed to be forming, upon annealing, LaMnO3 single crystals on the surface of the LMO pellet. Mo in LSM and Sr in LMO diffusion coefficients appear to be much higher than in LMO/LSM couple experiments, namely around 1-2x10-10cm2.s-1 at 1150°C. Because of the reactivity, LMO/LSM couple is not desirable for SOFC applications, unless an appropriate buffer layer separates them.The stability of LMO and W-LMO was studied under reductive atmospheres. Successive structural changes from LMO to La7Mo7O30 (7730), an amorphous reduced phase La2Mo2O7-δ, and partial decomposition to metallic Mo were observed as a function of oxygen loss. The pO2 stability domain of La2Mo2-yWyO9 did not appear to change with W content, but the reduction kinetics varied with y. At reverse, the stability limit of the 7730 phase was found to be dependent on W content. The amorphous reduced phase can accommodate a wide range of oxygen stoichiometry (7-δ from 6.69 to 6.20), but its stability vs. pO2 is questioned. Resistivity measurements performed on a low compacity crack-free amorphous La2Mo2O7-δ sample showed significant increase in the conductivity (> 1 S.cm-1 at 1000 K) relative to La2Mo2O9, with a pseudo activation energy 0.255eV. It is postulated that n-type electronic conductivity arises from partial reduction of hexavalent Mo6+ to a mixture of Mo3+ and Mo4+.

L'augmentation du pouvoir électrocatalytique d'une pile à combustible fonctionnant à haute température (SOFC, Solid Oxide Fuel Cell) passe notamment par l'amélioration des performances de la cathode. A cet effet, notre objectif a été de créer puis mesurer une conductivité mixte (électronique ou ionique) au sein de nouveaux oxydes de structure perovskite ABO3-d. Une étude fondamentale a été menée sur des composés choisis en fonction de l'état de valence et de la taille du cation B et du taux de lacunes d. La caractérisation des propriétés de transport (électronique et ionique) a été réalisée à l'aide de techniques nouvelles au laboratoire (meusure de la diffusion de 18O). Par la suite une corrélation entre les deux types de conductivité et les propriétés physico-chimiques des matériaux (paramètres de maille, polarisabilité des ions, ...) a été proposée.

Time-of-flight secondary ion mass spectrometry (ToF-SIMS) is a powerful technique for the analysis of organic surfaces and interfaces for many innovative technologies. However, despite recent developments, there are still many issues and challenges hindering the robust, validated use of ToF-SIMS for quantitative measurement. These include: the lack of metrology and fundamental understanding for the use of novel cluster primary ion beams such as C60ⁿ⁺ and Ar₂₀₀₀⁺; the need for validated and robust measurement protocols for difficult samples, such as those with significant micron scale surface topography; the lack of guidance on novel data analysis methods including multivariate analysis which have the potential to simplify many time-consuming and intensive analyses in industry; and the need to establish best practice to improve the accuracy of measurements. This thesis describes research undertaken to address the above challenges. Sample topography and field effects were evaluated experimentally using model conducting and insulating fibres and compared with computer simulations to provide recommendation to diagnose and reduce the effects. Two popular multivariate methods, principal component analysis (PCA) and multivariate curve resolution (MCR), were explored using mixed organic systems consisting of a simple polymer blend and complex hair fibres treated with a multi-component formulation to evaluate different multivariate and data preprocessing methods for the optimal identification, localisation and quantification of the chemical components. Finally, cluster ion beams C60ⁿ⁺ and Ar_500-2500⁺ were evaluated on an inorganic surface and an organic delta layer reference material respectively to elucidate the fundamental metrology of cluster ion sputtering and pave the way for their use in organic depth profiling. These studies provide the essential metrological foundation to address frontier issues in surface and nanoanalysis and extend the measurement capabilities of ToF-SIMS.

This thesis presents information on the subcellular localisation of two important trace elements, selenium and arsenic, in wheat, rice and rice roots for what is believed to be the first time. The general aim of this work was to illustrate the potential of using physical science techniques to solve biological problems. High resolution secondary ion mass spectrometry was undertaken using the CAMECA NanoSIMS50 with a sensitivity down to ppm concentrations and a lateral resolution of less than 100 nm. Selenium in wheat grain was found to be distributed across both the bran layer and the endosperm region with Se-rich hotspots found in the aleurone cells and a higher intensity of Se in the subaleurone region. Arsenic in rice grain was found in two key regions. In grains with high As and high dimethylarsinic acid (DMA) content, As was predominantly localised to the subaleurone region yet in lower concentration, hydroponically grown As(III)-treated grains the As was only localised to the aleurone layer near the ovular vascular trace (OVT). A combined NanoSIMS and S-XRF experiment revealed As hotspots near the OVT. A combination of high pressure freezing, high resolution secondary ion mass spectrometry and TEM was used to localise As in the roots of rice plants revealing a contrasting subcellular distribution of As and Si in the roots even though arsenite and silicic acid are transported across the plasma membranes by the same transporters. Fe plaque forms only on the root epidermis and was shown to be a strong sink for As. Colocalisation of S with As in the vacuoles of the endodermis, pericycle and xylem parenchyma supports the notion that As is stored as arsenite-phytochelatin complexes in the roots while Si is localised in the endodermis cell walls and is not strongly affected by the Lsi2 mutation.

Une période intéressante de l'histoire précoce du système solaire est celle du disque, i.e. la période pendant laquelle se déroule la plupart des processus qui vont conduire du mélange de gaz et de poussières nébulaires à des grains et des planétésimaux, qui seront à un stade ultérieur le matériel de départ pour la formation des embryons planétaires et des planètes. Les témoins de cette époque sont les constituants des météorites primitives (chondrites), principalement les inclusions réfractaires (CAIs) et les chondres. Une des questions centrales dans la compréhension des processus à l'origine des CAIs et des chondres est celle du temps. Les travaux récents de Johan Villeneuve ont permis de démontrer que l'26Al et les isotopes du Mg étaient distribués dans le disque d'accrétion à un niveau d'homogénéité permettant d'utiliser le système 26Al-26Mg comme le chronomètre le plus précis qui soit des évènements qui se sont déroulés lors des 2 ou 3 premiers millions d'années du disque. Le but de cette thèse a été de reprendre toute l'étude de l'26Al avec des mesures de plus haute précision que les mesures existantes, en associant les mesures in-situ (sonde ionique) et en roche totale (HR-MC-ICPMS). Les développements analytiques mis en place pour mesurer les compositions isotopiques en Mg ont été appliqués à l'étude d'olivines réfractaires et de chondres de la météorite Allende, et d'olivines de la pallasite Eagle Station. L'ensemble des données a permis d'apporter des éléments de réponse sur les âges de formation des chondres et de leurs précurseurs, et sur l'origine des olivines réfractaires riches en Mg et la possibilité que celles-ci figurent parmi les précurseurs des chondres / The disk history is a very interesting period of the early Solar System history, i.e. the period during which occurred most of the processes leading from the mixing of nebular gas and dust to grains, and then planetesimals, which will then constitute the starting material for formation of planetary embryos and terrestrial planets. The witnesses of this period that we have in the laboratory are the chondrite constituents, mostly refractory inclusions (CAIs) and chondrules. One of the central questions regarding the processes leading to the formation of CAIs and chondrules is the timing. Villeneuve et al. (2009, 2011) have shown that 26Al and Mg isotopes were homogeneously distributed in the accretion disk, at a level allowing the use of the 26Al-26Mg system as the most precise short-lived chronometer to constrain the 2 or 3 first million years of the disk history. My PhD project aimed at reconsidering the 26Al study with more precise measurements, and by combining in-situ (by MC-SIMS) and bulk (by HR-MC-ICPMS) analyses. The analytical developments we set for Mg-isotope measurements (because of the high precision needed) were then applied to a set of extraterrestrial materials, including Mg-rich isolated olivines and Mg-rich olivines in porphyritic type I chondrules from the Allende CV3 meteorite, as well as chondrules from the same meteorite, and olivines from the Eagle Station pallasite. The whole data set allowed to answer questions such as (i) the origin of chondrule precursor materials and the time of chondrule formation, as well as (ii) the origin of Mg-rich refractory olivines, and the possibility that the latters were part of chondrule precursors

ELEMENTAL AND ISOTOPIC STUDY OF DIFFERENTIATED METEORITES AND IMPLICATIONS FOR THE ORIGIN AND EVOLUTION OF THEIR PARENT BODIES Iron meteorites are differentiated meteorites composed largely of Fe-Ni alloys. The metallic phase of many iron meteorites shows a texture called the Widmanstätten pattern, which develops as a two-phase intergrowth of kamacite (α-bcc, ferrite) and taenite (γ-fcc, austenite), and forms by nucleation and growth of kamacite from taenite during slow cooling of the parent body. Selected iron meteorites - octahedrites of different structural and chemical groups (Canyon Diablo, Toluca, Bohumilitz, Horh Uul, Alt Biela, Nelson County, Gibeon and Joe Wright Mountain) were studied with intention to evaluate the scale and extent of Fe isotopic heterogeneities in iron meteorites and to find the possible link between the isotopic variations and thermal histories of the respective meteorite parent bodies. The Fe isotopic compositions of kamacite and taenite in the studied meteorites, obtained by three independent analytical techniques with different spatial resolution capabilities (laser ablation and solution MC ICP-MS and SIMS) show significant variations of up to ~4.5‰ in δ56 Fe. The taenite is isotopically heavier compared to kamacite in all studied meteorites. There is no correlation...

Dans la course à la miniaturisation des dispositifs de la microélectronique, les alliages SiGe sont des matériaux remarquables pour poursuivre l'amélioration des performances des composants de type CMOS, le Silicium atteignant aujourd'hui ses limites physiques. En effet, une méthode originale pour appliquer une contrainte de compression uniaxiale au canal de conduction Silicium, afin d'augmenter la mobilité des trous des transistors pMOS, consiste à remplacer le Silicium dans les régions Source et Drain par des couches SiGe pseudomorphiques. L'utilisation de sources solides sacrificielles de Germanium peut être une solution pour la fabrication de telles structures. Dans ce travail, nous avons ainsi étudié l'interdiffusion Ge-Si, induite par recuit thermique à haute température, à partir d'hétérostructures Ge/Si dont la couche de Germanium est déposée par CVD. Le développement de la méthodologie SIMS MCs2+, que nous réalisons dans cette thèse, assure la caractérisation chimique de couches graduelles Si1-xGex dans la gamme complète de concentrations (0 d x d 1). Nous montrons que l'interdiffusion Ge-Si est fortement dépendante de la composition en Germanium mais également des défauts structuraux formés aux interfaces Ge-Si. Nous avons alors développé un modèle qui permet de reproduire fidèlement les profils expérimentaux. L'effet du dopage Bore tend à réduire légèrement l'interdiffusivité. Finalement, nous montrons que l'utilisation de couches de Germanium polycristallin est prometteuse pour la fabrication de couches graduelles Si1-xGex. En effet, elle permet de réduire la densité de défauts structuraux initialement présents dans les films monocristallins.