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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
121

Studies of Zinc Transport and Its Contribution to Zinc Homeostasis in Cultured Cortical Neurons

Qin, Yan 29 December 2008 (has links)
No description available.
122

ASSESSING SEASONAL DYNAMICS OF SOIL CO2 EFFLUX USING CONTINUOUS MEASUREMENTS IN A TEMPERATE PINE FOREST

Nicholas, Emily January 2011 (has links)
<p>This study explores the seasonal dynamics of soil CO<sub>2</sub> efflux (Rs) in a temperate pine plantation forest located in Southern Ontario, Canada. Rs was continuously measured from June 15, 2008 to December 31, 2010 at this site using an automated soil CO<sub>2</sub> chamber system. Component analysis of Rs conducted by making continuous measurements in a trenched plot where live roots were excised indicated that heterotrophic respiration (Rh) contributed approximately 72 and 80% (895 and 920 g C m<sup>-2</sup> year<sup>-1</sup>) of annual Rs in 2009 and 2010, respectively. Similarly, continuous Rs measurement in a litterless plot where the surface litter layer was removed contributed 65 and 57% (800 and 655 g C m<sup>-2</sup> year<sup>-1</sup>) of annual Rs in 2009 and 2010, respectively. Results of this study suggested that overall soil temperature was the dominant control on Rs in this forest, except during the severe dry conditions.</p> <p>In order to explore the impact of soil water limitations on Rs a through-fall exclusion experiment conducted from April 1 to July 3, 2009 - the spring and early summer season. Through-fall exclusion caused a large reduction in daily Rs. This experiment further suggested that Rs became less sensitive to temperature and increasingly more sensitive to water as soil water content depleted due to the through-fall exclusion. This study helps to better understand the seasonal dynamics of Rs, and its components and controls in temperate conifer forests in Eastern North America. These forests are considered a large sink of carbon, and changes in Rs dynamics in this region may have implications for the global carbon cycle.</p> / Master of Science (MSc)
123

Chemical Inhibition of Nitrification: Evaluating Methods to Detect and Characterize Inhibition and the Role of Selected Stress Responses Upon Exposure to Oxidative and Hydrophobic Toxins

Kelly, Richard Thomas, II 21 July 2005 (has links)
This research first examined nitrification inhibition caused by different classes of industrially relevant chemicals on activated sludge and found that conventional aerobic nitrification was inhibited by single pulse inputs of every chemical tested, with 1-chloro-2,4-dinitrobenzene (oxidant) having the most severe impact, followed by alkaline pH 11, cadmium (heavy metal), cyanide, octanol (hydrophobic) and 2,4-dinitrophenol (respiratory uncoupler). Of the different chemicals tested, the oxidative and hydrophobic chemicals showed severe nitrification inhibition relative to other treatment processes and therefore deserved further investigation. For oxidative chemicals, we hypothesized that the more severe inhibition was because nitrifying bacteria lack one or more of the microbial stress response mechanisms used to mediate the toxic effect of oxidative chemicals. During these experiments, we showed that a rapid (minutes) antioxidant potassium efflux mechanism does not exist in two nitrifying bacteria, Nitrosomonas europaea and Nitrospira moscoviensis. Furthermore, we showed that another important antioxidant molecule, glutathione, was not oxidized as readily as in a non-nitrifying bacterium. Furthermore, we hypothesized that hydrophobic chemical-induced nitrification inhibition recovered more quickly because of the presence of membrane modification stress response mechanisms. While testing this hypothesis, we showed that N. europaea modified its cell membrane in response to hydrophobic chemicals using a long-term (hours) membrane modification mechanism that required the synthesis of new fatty acids, but it did not contain a short-term (minutes) response mechanism involving a cis/trans isomerase. Therefore, investigating these nitrifier stress responses showed that nitrifiers lack short-term stress responses that may be used to rapidly detect inhibition, indicating that conventional methods of detecting nitrification inhibition, like differential respirometry and nitrate generation rate (NGR), are still the fastest and easiest methods to use. Because several conventional methods exist, we also investigated differences between differential respirometry and a UV method we developed to measure NGR. During these tests, we showed that the UV NGR method provided a more reliable measure of nitrification inhibition than differential respirometry, and that the time to maximum nitrification inhibition depended on the properties of the chemical toxin, which implies that longer exposure times may be needed to accurately predict nitrification inhibition. / Ph. D.
124

Soil Co2 Efflux and Soil Carbon Content as Influenced by Thinning in Loblolly Pine Plantations on the Piedmont of Virginia

Selig, Marcus Franklin 30 July 2003 (has links)
The thinning of loblolly pine plantations has a great potential to influence the fluxes and storage of carbon within managed stands. This study looked at the effects of thinning on aboveground carbon and mineral soil carbon storage, 14-years after the thinning of an 8-year-old loblolly pine plantation on the piedmont of Virginia. The study also examined soil respiration for one year following the second thinning of the same stand at age twenty-two. The study was conducted using three replicate .222 hectare stands planted using 3.05 by 3.05 meter spacing in 1980 at the Reynolds Homestead in Critz, VA. Using two different sample collection methods it was determined that soil carbon was evenly dispersed throughout thinned plots, and that random sampling techniques were adequate for capturing spatial variability. Soil carbon showed a significant negative correlation with soil depth (p=0.0001), and by testing the difference between intercepts in this relationship, it was determined that thinning significantly increased soil carbon by 31.9% across all depths (p=0.0004). However, after accounting for losses in aboveground wood production, thinning resulted in an overall 10% loss in stand carbon storage. However, this analysis did not take into account the fate of wood products following removal. Soil respiration, soil temperature, and soil moisture were measured every month for one year near randomly selected stumps and trees. In order to account for spatial variation, split plots were measured at positions adjacent to stumps and 1.5 meters away from stumps. Soil temperature and moisture were both significantly affected by thinning. Regression analysis was performed to determine significant drivers in soil CO2 efflux. Temperature proved to be the most significant driver of soil respiration, with a positive correlation in thinned and unthinned stands. When modeled using regression, thinning was a significant variable for predicting soil respiration (p < 0.0009), but explained only 3.4% of the variation. The effects of thinning were responsible for decreased respiration, however, when coupled with increased temperatures, soil respiration was elevated in thinned stands. / Master of Science
125

A Performance Evaluation of Low Pressure Carbon Dioxide Discharge Test

Lee, Sung-Mo 30 April 2004 (has links)
For gaseous fire extinguishing systems, the maximum percent of agent in pipe, i.e., pipe volume vs. agent liquid volume should be determined for proper system design and performance by confirming the maximum length of pipe run in which their flow calculation methods can predict the discharge pressures and agent concentration. It is the purpose of this paper to determine the ability and limitations of the NFPA 12 flow calculation methodology to identify the maximum percent of agent in pipe by conducting full scale low-pressure CO2 system discharge tests. A total of twenty low-pressure CO2 system discharge tests were conducted under different conditions. If all the measured pressures at the three node points of pipe runs and the measured CO2 concentrations in the test enclosures did not deviate from the predicted values of computerized flow calculations by more than ¡¾10 percent, the tests were judged to be acceptable. In the test results, the low-pressure CO2 system with a pipe run exceeding 492 ft (150 m) was not likely to achieve the concentration required for fire extinguishment within the determined discharge time although the pipe network was installed in compliance with the calculations based on the pressure drop equation in NFPA 12.
126

Nouvelle stratégie de véctorisation d'antibactériens via des métallodrogues : Principe, Synthèse et Activité biologique / New antimicrobial vectorization strategy via metallodrugs : principle, synthesis and biological activity

Alimi, Mickaël 30 November 2012 (has links)
L'enveloppe cellulaire des bactéries à Gram négatif constitue la première ligne de défense contre les antibiotiques. Sous l’effet, d’une part, de la faible perméabilité de la membrane externe qui s'oppose à la pénétration des agents antibactériens, d’autre part des pompes d'efflux qui favorisent leur expulsion, elle empêche nombre de composés potentiellement actifs in vitro d'atteindre leur cible, limitant l’effet antibactérien. Un enjeu important pour restaurer l’activité de ces molécules est de trouver une stratégie pour en augmenter la concentration intracellulaire. L'objectif de cette thèse est de développer des métallodrogues comme nouvelle stratégie de vectorisation de drogues dans les cellules. Cette stratégie repose sur l’association d'une drogue active in vitro, et d’un ligand auxiliaire ayant des propriétés perméabilisantes ou inhibitrices de pompe d’efflux, dans un complexe qui jouera le rôle de chaperone. Les agents antibactériens utilisés sont des inhibiteurs (dérivés d’acides hydroxamiques) de peptide déformylase (PDF) et de méthionine aminopeptidase (MetAP) développés au laboratoire. Tout d’abord, une étude globale de la stratégie de vectorisation a été réalisée (i) étude de stabilité de métallodrogues modèles : en utilisant un acide hydroxamique fluorescent, nous avons montré que, seules, des métallodrogues à Co(III), à la différence de celles à Cu(II) et Fe(III), satisfaisaient aux conditions de stabilité compatibles avec les conditions de tests biologiques. (ii) Etude de la libération de la drogue : nous avons établi par une étude RMN 1H et UV-vis qu’en milieu tampon pH = 7,4, la libération de la drogue se faisait par échange de ligand avec un thiol exogène. Récemment, une nouvelle série d’inhibiteurs de PDF a été synthétisée au laboratoire. Elle est basée sur un squelette hétérocyclique à 5 chaînons fonctionnalisé par une chaîne en C4, puis via un espaceur monocarboné, à un acide hydroxamique. Les meilleurs résultats ont été obtenus avec un oxadiazole (AT002 16 µg/ml sur E. coli en présence de perméabilisant PMBN). Au cours de cette thèse, pour améliorer la lipophilie, des groupements aromatiques ont été fixés sur cet hétérocycle. Les MICs sur la souche d’E. coli sauvage n’ont pas été améliorées mais en présence de PMBN, le dérivé présentant la meilleure activité est le composé AT015 (2 µg/ml sur E. coli en présence de PMBN) qui a donc été choisi pour concevoir des métallodrogues. La métallodrogue réunit autour d’un métal deux parties: (i) un ligand auxiliaire fonctionnalisé via un espaceur par un perméabilisant peptidique analogue de peptide antimicrobien ou par un modulateur de l’efflux (ii) un acide hydroxamique inhibiteur de PDF. Au cours de la SAR réalisée en faisant varier la drogue, le ligand auxiliaire et le métal, nous avons montré que les meilleures métallodrogues permettent d’améliorer l’activité de la drogue sur la souche d’E. coli sauvage d’un facteur 16. Un des ligands auxiliaires fonctionnalisé par un tétrapeptide présente, seul, une activité sur une souche d’E. aerogenes résistante aux fluoroquinolones. Sur ce cas, l’activité biologique a été reliée, par des expériences de mapping par fluorescence, à son accumulation intracellulaire, en utilisant un analogue fluorescent de ce composé. / The gram negative bacterias’ cell envelopes are the first line of defense against antibiotics. First thanks to the low permeability of the external membrane that prevents the penetration of the antibiotics, but also thanks to the efflux pumps that help expelling the antibiotics from the cell. These mechanisms prevent many compounds, potentially active in vitro, from reaching their targets, thus limiting the antimicrobial effect. To increase the molecules’ intracellular concentration is one of the means to restore their activity. This thesis’ objective is to develop metallodrugs as a new drug vectorization strategy in cells. We here associate an active drug in vitro and an auxiliary ligand with permeabilization or efflux pumps inhibition abilities in a complex playing the role of a chaperone. We used peptide deformylase (PDF) and methionine aminopeptidase (MetAP) inhibitors (derived from hydroxamic acids) developed at the laboratory as antimicrobial agents. I’ll begin with a global study of the vectorization strategy we’ve adopted (i) Stability study of the metallodrugs models: using a fluorescent hydroxamic acid, we showed that only Co(III) metallodrugs are in agreement with the stability conditions compatible with the biological tests, in opposition with the Cu(II) and Fe(III) ones. (ii) Drug release study: we showed in 1H NMR and UV-vis studies that in a buffer solution pH 7.4, a ligand exchange with an exogenous thiol is responsible for the drug release. Recently, a new series of PDF inhibitors was synthesized at the laboratory. It is composed of a 5 membered heterocyclic skeleton functionalized by a chain in C4 followed by an hydroxamic acid via a monocarbonated spacer. The best results were obtained with an oxadiazole (AT002 16 µg/ml with E. coli and PMBN as permeabilizing agent). During this thesis, to enhance lipophilicity, we attached aromatic groups on the heterocycle. CMIs on the E. coli strain have not been increased but the compounds displaying the best activity in presence of PMBN (AT015, 2 µg/ml with E. coli and PMBN) was chosen to conceive metallodrugs. The metallodrug is composed of a metal center and two other parts: (i) an auxiliary ligand functionalized via a spacer by a permeabilizing peptide, an antimicrobial peptide analogue, or by an efflux modulator. (ii) An hydroxamic acid PDF inhibitor. We showed that the best metallodrugs enhance the drug activity on the wild E.coli strain by a 16 factor, with the SAR we realized, changing the drug, the auxiliary ligand and the metal. One of the auxiliary ligands functionalized by a tetrapeptide show an activity on a fluoroquinolone-resistant E. aerogenes strain while alone. Utilizing a fluorescent analogous of this compound, we linked the biological activity to its intracellular accumulation with fluorescence mapping experiments.
127

Patched, une nouvelle cible thérapeutique pour le cancer de la corticosurrénale / Patched as a new target for adrenocortical carcinoma treatment

Hasanovic, Anida 15 March 2018 (has links)
Nous avons récemment démontré que le récepteur du morphogène Hedgehog, Patched, qui est exprimé dans de nombreux cancers, est un transporteur de multiples drogues qui contribue à la résistance des cellules cancéreuses à la chimiothérapie. Le criblage d'une banque de molécules nous a permis d'identifier deux molécules qui inhibent l'activité d'efflux de doxorubicine de Patched. Nous avons montré que ces molécules renforcent les effets cytotoxiques, proapoptotiques, antiprolifératifs et anticlonogéniques de la doxorubicine sur les cellules de cancer de la glande surrénale (surrénalome) qui expriment de façon endogène Patched. De plus, nous avons observé que l’ajout de la molécule P375 au traitement à la doxorubicine inhibe le développement des tumeurs chez des souris ayant reçu une xénogreffe de cellules de surrénalome de façon plus significative que la doxorubicine seule. Nos résultats suggèrent que l'utilisation d'un inhibiteur de l'activité d'efflux de drogues de Patched en association avec la doxorubicine est une option thérapeutique prometteuse pour le surrénalome, et très probablement pour d'autres cancers exprimant Patched. Nous avons découvert qu'une petite fraction seulement des cellules de la lignée de surrénalome exprime Patched au niveau de la membrane plasmique (cellules PM-Patched). Les cellules PM-Patched sont plus résistantes à la doxorubicine, et présentent une expression plus élevée de Patched mais aussi de la protéine ABCG2. ABCG2 étant un marqueur de cellules souches cancéreuses (CSC), nous pensons que les cellules PM-Patched pourraient être des CSC.D'autres expériences sont nécessaires pour valider cette hypothèse. / We recently demonstrated that the Hedgehog receptor Patched, which is expressed in many recurrent and metastatic cancers, is a multidrug transporter contributing to chemotherapy resistance. The screening of a chemical library allowed us identifying two molecules which inhibit the doxorubicin efflux activity of Patched. We showed that these molecules enhance the cytotoxic, proapoptotic, antiproliferative and anticlonogenic effects of doxorubicin on adrenocortical carcinoma (ACC) cells which endogenously express Patched. Moreover, we reported that the addition of the drug-like molecule P375 to doxorubicin treatment prevents the development of xenograft ACC tumours in mice much more significantly than the doxorubicin alone. Our results suggest that the use of an inhibitor of Patched drug efflux activity in combination with doxorubicin is a promising therapeutic option for ACC and most likely for other Patched-expressing cancers. We discovered that only a small fraction of the ACC cell line expressed Patched at the plasma membrane (PMPatched cells). We observed that these cells are more resistant to doxorubicin treatment than ACC cells that express Patched only in intracellular compartments. Moreover, we estimated that PMPatched cells have higher expression of Patched but also of ABCG2/BCRP proteins. Based on the fact ABCG2/BCRP is a cancer stem cell (CSC) marker and that Hedgehog signaling is involved in maintenance of CSC, we think that PM-Patched cells could be CSCs. More experiments are needed to confirm this hypothesis.
128

Structure-fonction des transporteurs transmembranaires de la famille MmpL3 de Mycobacterium tuberculosis

Yazidi, Amira 04 1900 (has links)
L’émergence de la résistance à une multitude d’agents antimicrobiens chez des bactéries pathogènes est considérée comme une menace majeure pour la santé publique (2). Ces souches sont reconnues comme des organismes multirésistants aux médicaments ou MDR (multidrug-resistant) (4). Les recherches progressent chez les bactéries, à Gram positif, à Gram négatif et acido-alcoolo-résistantes au vu de l’ampleur de la menace pour la santé publique, ces bactéries multirésistantes sont devenues les cibles potentielles à cette fin de recherche. De ce fait, les objectifs de la présente étude ont consisté en la caractérisation structurale et fonctionnelle de différents transporteurs transmembranaires de la famille des RND (Resistance-Nodulation-Division) encore énigmatiques, à savoir: le MmpL3 chez Mycobacterium tuberculosis (Mtb) via l’étude de son orthologue CmpL1 chez Corynebacterium glutamicum (Cgl) et le TriAxBC chez Pseudomonas aeruginosa (P. aeruginosa). Ainsi, comme première démarche présentée dans le chapitre 2, la structure du transporteur MmpL3 Mtb (un transporteur d'acides mycoliques – sous forme de tréhalose de monomycolates (ou TMM) - essentiel pour la viabilité de Mtb) (5) et celle de son orthologue CmpL1 Cgl ont été prédites via le serveur I-TASSER (6-8). Ces structures ont été validées par la suite en comparant à la carte électronique générée pour CmpL1 (18 Å) par des analyses de microscopie électronique en transmission à coloration négative (TEM). La caractérisation du transporteur CmpL1 purifié par chromatographie à exclusion stérique a confirmé le complexe trimérique de taille avoisinant les 315 KDa (incluant la couronne du détergent) en accord avec des analyses par gel SDS-PAGE. Des études génétiques et biochimiques en collaboration ont d’autre part identifié des résidus engagés dans le transport du TMM chez MmpL3 ainsi que d’autres impliqués dans la résistance à des inhibiteurs ciblant ce transporteur. L’ensemble de ces données a mis en évidence la localisation des résidus essentiels au transport et à la résistance au niveau du canal central du modèle trimérique de MmpL3. La région de MmpL3 activant le transport par force protomotrice a été localisée au niveau d’une cavité centrale qui est une caractéristique intrinsèque de la famille des RND. Les cartes électroniques de faible résolution déjà obtenues pour la protéine CmpL1 font de ce projet une des directions futures du laboratoire. Dans le chapitre 3, nous illustrons le deuxième aspect du présent projet qui repose sur l’extension de l’étude du potentiel thérapeutique du ciblage du transporteur transmembranaire MmpL3 chez les différentes souches de Mycobacterium. Nos collaborateurs ont effectué une analyse biochimique de l’effet thérapeutique des inhibiteurs les plus prometteurs du transporteur MmpL3 Mtb sur certaines souches mycobactériennes non-tuberculeuses (NTB) multi-résistantes. Basés sur nos modélisations structurales comparatives obtenues par I-TASSER (6-8), nous avons pu complémenter les informations biochimiques en soulignant les similitudes et les différences de structure entre les souches TB et NTB ainsi que leurs impacts fonctionnels. Ce chapitre met en évidence l’intérêt du ciblage thérapeutique de MmpL3 chez les espèces NTB. En effet, l’efficacité de certains inhibiteurs de MmpL3 Mtb sélectionnés sur le traitement des infections pulmonaires NTB promet de pouvoir généraliser cette nouvelle voie de traitement pour d’autres souches multi-résistantes NTB voire à contribuer à remédier à la problématique de la résistance aux antibiotiques et décomplexifier le traitement actuel. D’autres études en collaboration entreprenant les mêmes approches d’études structurales ont été réalisées pour les transporteurs tripartites TriAxBC (P. aeruginosa), des pompes à efflux appartenant à la famille des RND. Le but du chapitre 4 était de générer une structure du complexe et de déchiffrer son mode d’assemblage et d’expulsion des antibiotiques vers le milieu externe. Un modèle à structure quaternaire de TriAxBC a été prédit par I-TASSER (6-8) et validé contre sa carte électronique à 4.3 Å générée en Cryo-EM. Le complexe TriAxBC a été également caractérisé par filtration sur gel confirmant une taille approximative de 620 KDa et sa composition en trimère par visualisation sur gel SDS-PAGE. En conclusion, nous avons pu à travers cette étude combiner différentes approches biochimiques, génétiques et structurales soutenant la nécessité d’une approche multidisciplinaire pour l’approfondissement de la compréhension de la structure et du mode de fonctionnement des transporteurs RND. Ces derniers demeurent toujours énigmatiques; toutefois, nos avancées et d’autres à venir permettront la génération de nouveaux médicaments spécifiques traitant les bactéries multirésistantes. / The emergence of resistance to a multitude of antimicrobial agents in pathogenic bacteria is considered a major threat to public health (2). These strains are recognized as multidrug resistant organisms (MDR) (4). Research is progressing in Gram positive, Gram positive high GC and Gram negative bacteria, and given the scale of the public health threat, these MDR have become potential targets for this research. The objectives of the present study consist of the structural and functional characterization of various transmembrane transporters of the still enigmatic RND (Resistance-Nodulation-Division) family, namely: MmpL3 in Mycobacterium tuberculosis (Mtb) via the study of its ortholog CmpL1 in Corynebacterium glutamicum (Cgl) and TriAxBC in Pseudomonas aeruginosa (P. aeruginosa). The first component of this project, presented in Chapter 2, studies the structure of the transporter MmpL3 Mtb (a TMM mycolic acid transporter essential for the viability of Mtb (5) and that of its CmpL1 Cgl orthologue, which have been predicted via the I- Tasser Pack (6-8). These structures were subsequently validated by comparing to the electronic map generated for CmpL1 (18 Å) by negative staining transmission electron microscopy (TEM). Characterization of the purified CmpL1 transporter by size exclusion chromatography confirmed the trimeric complex size around 315 KDa (including the detergent crown) corroborated by SDS-PAGE gel analyses. Collaborative genetic and biochemical studies have also identified residues involved in the transport of TMM in MmpL3 as well as those residues conferring antibiotic resistance. This data highlighted the location of the essential residues of transport and resistance in the central channel of the trimeric Mmpl3 model. The MmpL3 region activating proto-motor transport has been located at a central cavity, which is an intrinsic feature of the RND family. The low-resolution electronic maps obtained for the protein CmpL1 may serve as the foundation of future studies. In Chapter 3 we explore the therapeutic potential of the targeting of the transmembrane transporter MmpL3 in different Mycobacterium strains. Our collaborators studied the therapeutic effect of the most promising inhibitors of the MmpL3 Mtb transporter on certain multi-resistant mycobacterial non-tuberculous (NTB) strains. Based on our comparative structural modeling obtained by I-TASSER (6-8), we supplemented the biochemical data by highlighting the structural similarities and differences between the TB and NTB strains as well as their functional impacts. This chapter highlights the interest of direct or indirect targeting of MmpL3 in NTB species. Indeed, the efficacy of certain selected MmpL3 Mtb inhibitors on the treatment of NTB pulmonary infection have potential as generalizable treatment options for other NTB multi-resistant strains, or even to help address the problem of resistance to antibiotics and simplify current combination approaches. Other collaborative studies undertaking the same structural approaches were carried out for TriAxBC tripartite carriers (P. aeruginosa), efflux pumps belonging to the RND family. The purpose of Chapter 4 was to generate a structure of the complex and decipher its mode of assembly and expulsion of antibiotics from the intracellular environment. A quaternary structure model of TriAxBC was predicted by I-TASSER (6-8) and validated against its 4.3 Å electronic map generated by Cryo-EM. The TriAxBC complex was also characterized by gel filtration confirming an approximate size of 620 KDa and its trimer composition by SDS-PAGE. In conclusion, this study is combining different biochemical, genetic and structural approaches to highlight the need for a multidisciplinary approach to characterizing the structure function of RND transporters. The latter remain enigmatic; however, our contribution and the progress of others will allow the generation of new specific drugs targeting multiresistant strains.
129

Binder of SPerm protein interference in sperm-egg interaction

Heidari Vala, Hamed 02 1900 (has links)
No description available.
130

Impact of selected herbal products on intestinal epithelial permeation and metabolism of indinavir / Carlemi Calitz

Calitz, Carlemi January 2014 (has links)
Patients on anti-retroviral (ARV) drug treatment are sometimes simultaneously taking other prescribed drugs and/or over-the-counter drugs and/or herbal remedies. Pharmacokinetic drug-drug or herb-drug interactions can occur in these patients, which might be synergistic or antagonistic in nature leading to increased or decreased bioavailability of the ARV. Consequences of bioavailability changes may either be adverse effects due to increased plasma levels, or lack of pharmacological responses due to decreased plasma levels. The aim of this study is to determine if pharmacokinetic interactions exist between selected commercially available herbal products, namely Linctagon Forte®, Viral Choice® and Canova® and the ARV, indinavir, in terms of transport and metabolism in cell culture models. Bi-directional transport of indinavir was evaluated across Caco-2 cell monolayers in four experimental groups, namely indinavir alone (200 μM, negative control group), indinavir in combination with Linctagon Forte®, indinavir in combination with Viral Choice® and indinavir in combination with Canova® at three different concentrations. Verapamil (100 μM), a known P-gp inhibitor, was combined with indinavir in the positive control group. Samples obtained from the transport studies were analysed by means of a validated high performance liquid chromatography (HPLC) method. The apparent permeability coefficient (Papp) values were calculated from the transport results in both directions and the efflux ratio (ER) values were calculated from these Papp values. The metabolism of indinavir was determined in LS180 cells in the same groups as mentioned for the transport study but with ketoconazole (40 μM), a known CYP3A4 inhibitor, as the positive control group. Indinavir and its predominant metabolite (M6) were analysed in the metabolism samples by means of liquid chromatography linked to mass spectroscopy (LC/MS/MS) to determine the effect of the herbal products on the biotransformation of indinavir. The BL-AP transport of indinavir increased in a concentration dependent way in the presence of Linctagon Forte® and Viral Choice® when compared to that of indinavir alone (control group). Canova® only slightly affected the efflux of indinavir compared to that of the control group. Noticeable increases in the efflux ratio values of indinavir were found for Linctagon Forte® and Viral Choice®, whilst the effect of Canova® on the efflux ratio value was negligible. There was a pronounced inhibition of the metabolism of indinavir in LS180 cells over the entire concentration range for all the herbal products investigated in this study. These in vitro pharmacokinetic interactions indicate the selected herbal products may affect indinavir’s bioavailability, but the clinical significance needs to be confirmed with in vivo studies before final conclusions can be made. / MSc (Pharmaceutics), North-West University, Potchefstroom Campus, 2015

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