Spelling suggestions: "subject:"lipidbilayer"" "subject:"lipidbilayers""
91 |
Polymer Supported Lipid Bilayer Membranes for the Integration of Transmembrane ProteinsRenner, Lars 04 May 2009 (has links) (PDF)
This work reports on the successful formation of supported multicomponent lipid bilayer membranes (sLBMs) from natural occurring lipids as well as synthetic lipids on a set of polymer cushions consisting of alternating maleic acid copolymers. Maleic acid copolymers provide a versatile platform to adjust the physico-chemical behaviour by the choice of the comonomer unit. The formation of sLBMs was triggered by a transient reduction of the electrostatic repulsion between the polymer cushions and the lipid vesicles by lowering the solutions pH to 4. Upon formation the stability of sLBMs was not affected by subsequent variations of the environmental pH to 7.2. Even drastic changes in the environmental pH (between pH 2 and pH 9) did not lead to delamination and proved the stability of the polymer sLBM. The degree of hydrophilicity and swelling of the anionic polymer cushions was found to determine both the kinetics of the membrane formation and the mobility of the lipid bilayer with lipid diffusion coefficients in the range from 0.26 to 2.6 µm2 s-1. An increase in cushion hydrophilicity correlated with a strong increase in the diffusion coefficient of the lipids. This trend was found to correlate with the kinetics of bilayer formation in the process of vesicle spreading. The observations strongly support the important role of the support’s polarity for the fluidity of the sLBM, which is probably related to the presence of a water layer between support and bilayer. The investigated polymer cushions are considered to open new options for the in situ modulation of lipid bilayer membranes characteristics to match the requirements for the successful integration of functional transmembrane proteins (TMPs). As each cushion exhibits different physico-chemical properties, the resulting behaviour of the sLBMs and TMPs could be exactly adjusted to the specific requirements of biological samples. This is exemplarily shown by the integration of the TMP beta amyloid precursor protein cleaving enzyme (BACE). Integrated BACE was observed to be mobile on all polymer cushions. On the contrary, no lateral mobility of BACE was found in solid sLBM. Furthermore, the activity of integrated BACE was analysed by the cleavage of an amyloid precursor protein analogue. Remarkably, the polymer cushions did not only enhance the mobility but were also found to increase the activity of BACE by a factor of 1.5 to 2.5 in comparison to solid sLBM. From the obtained results it is obvious that even small cytoplasmic domains of transmembrane proteins might not be preserved upon the integration in silica sLBM. The observed beneficial effects of the utilised polymer cushions on the mobility and activity of transmembrane proteins motivate further studies to clarify the general applicability of the polymer platform. Altogether, this polymer platform provides valuable options to form sLBM with varying characteristics to reconstitute transmembrane proteins for a wide range of possible future applications in biology. / Die vorliegende Arbeit beschreibt die Bildung von polymer unterstützten Lipiddoppelschichten zur Integration von transmembranen Proteinen. Das Polymerkissensystem besteht aus alternierenden Maleinsäurecopolymeren. Lipiddoppelschichten wurden durch die Steuerung der elektrostatischen Repulsion erzeugt: die Verringerung des pH-Wertes auf 4 wurde eine Erhöhung der adsorbierten Vesikelmenge auf den Polymeroberflächen induziert. Nach der erfolgten Bildung der Lipiddoppelschichten kann der pH-Wert beliebig variiert werden, ohne dass die Stabilität der Lipiddoppelschichten beeinflusst wird. Auch drastische Veränderungen des pH-Milieus (pH 2 - pH 9) führten zu keinen Veränderungen in der Membranintegrität. Der Grad der Hydrophilie und der Quellung der anionischen Polymerschichten beeinflusst sowohl die Bildung der Modellmembranen als auch die Mobilität der integrierten Lipidmoleküle. Dabei reichen die erzielten Lipiddiffusionskoeffizienten von 0.26 bis 2.6 µm2 s-1. Dabei ist die Mobilität direkt von der Hydrophilie des Substrates abhängig. Die beobachteten Ergebnisse zeigen deutlich die entscheidende Rolle der Polarität der verwendeten Substratoberflächen auf die Lipidmobilität, die sehr wahrscheinlich mit der Präsenz einer variablen Wasserschicht zusammenhängt. Die untersuchten Polymerkissen eröffnen neue Möglichkeiten für die insitu Modulierung der Charakteristika von Lipidschichten, um funktionale transmembrane Proteine zu integrieren. Aufgrund der unterschiedlichen physiko-chemischen Eigenschaften kann das Verhalten der Lipidschichten und der transmembranen Proteine nach den spezifischen Anforderungen des Modellsystems angepasst werden. Die funktionale Integration wurde am Beispiel des transmembranen Proteins BACE nachempfunden. Die Mobilität des integrierten BACE wurde auf allen Polymerkissen beobachtet. Im Gegensatz dazu wurde auf harten Substraten keine BACE Mobilität gefunden. Die Aktivität des integrierten BACE wurde durch die enzymatische Spaltung eines APP-Analogons nachgewiesen. Bemerkenswerteweise wurde ein Anstieg der BACE Aktivität auf den Polymerkissen um den Faktor 1,5 bis 2,5 im Vergleich zu den auf harten Substraten integrierten BACE beobachtet. Zusammenfassend, die verwendeten Polymerkissen bieten vielfältige Möglichkeiten Lipidschichten mit variierenden Eigenschaften für die Integration von transmembranen Proteinen zu erzeugen.
|
92 |
Protein–Lipid Interactions and the Functional Role of Intra-Membrane Protein Hydration in the PIB-type ATPase CopA from Legionella pneumophilaFischermeier, Elisabeth 24 November 2015 (has links) (PDF)
Membrane proteins are vital for cellular homeostasis. They maintain the electrochemical gradients that are essential for signaling and control the fine balance of trace elements. In order to fulfill these tasks, they need to undergo controlled conformational transitions within the lipid bilayer of a cell membrane. It is well-recognized that membrane protein structure and function depends on the lipid membrane.
However, much less is known about the role of water re-partitioning at the protein–lipid interface and particularly within a membrane protein during functional transitions. Intra-membrane protein hydration is expected to be particularly important for ion transport processes, where the hydration shell of a solvated ion needs to be rearranged and partially removed in order to bind the ion within the transporter before it is re-solvated upon exiting the membrane protein. These processes are spatially and temporally organized in metal-transporting ATPases of the PIB-subtype of P-type ATPases.
Here, the functional role of water entry into the transmembrane region of the copper-transporting PIB-type ATPase CopA from Legionella pneumophila (LpCopA) has been investigated. The recombinant protein was affinity-purified and functionally reconstituted into nanodiscs prepared with the extended scaffolding protein MSP1E3D1. Nanodiscs provide a planar native-like lipid bilayer in a water-soluble nanoparticle with advantageous optical properties for spectroscopy. The small polarity-sensitive fluorophore 6-bromoacetyl-2-dimethylaminonaphthalene (BADAN) was used as a probe for the molecular environment of the conserved copper-binding cysteine-proline-cysteine (CPC) motif which is located close to a wide “entry platform” for Cu+ to the transmembrane (TM) channel. The systematic study of proteins with mutated metal-binding motifs using steady-state and time-resolved fluorescence spectroscopy indicates that strong gradients of hydration and protein flexibility can exist across the narrow range of the CPC motif.
The data suggest that Cu+ passes a “hydrophobic gate” at the more cytoplasmic C384 provided by rather stable TM helix packing before entering a more flexible and readily hydratable site in the interior of LpCopA around C382 where the polarity is strongly regulated by protein–lipid interactions. This flexibility could also be partly mediated by rearrangements of an adjacent amphipathic protein stretch that runs parallel to the membrane surface as a part of the cytoplasmic entry site. Using tryptophan fluorescence, circular dichroism, and Fourier-transform infrared absorption spectroscopy of a synthetic peptide derived from this segment, its lipid-dependent structural variability could be revealed. Depending on lipid-mediated helix packing interactions, the CPC motif has the potential to support a strong dielectric gradient with about ten units difference in permittivity across the CPC distance. This property may be crucial in establishing the directionality of ion transport by a non-symmetric re-solvation potential in the ion release channel of LpCopA.
The experimental elucidation of these molecular details emphasizes not only the importance of intra-membrane protein water which has been hypothesized particularly for PIB-type ATPases. Moreover it is shown here, that the lateral pressure of a cell membrane may provide a force that restores a low hydration state from a transiently formed state of high internal water content at the distal side of the CPC motif. ATP-driven conformational changes that induce intra-membrane protein hydration of a conformational intermediate of the Post-Albers cycle could thus be set back efficiently by lateral pressure of the cell membrane at a later step of the cycle.
|
93 |
Mechanical properties of pore-spanning membranes prepared from giant vesicles / Mechanische Eigenschaften von Poren-Spanning Membranen aus Riesenvesikeln vorbereitetKocun, Marta 23 May 2011 (has links)
No description available.
|
94 |
Étude des mécanismes moléculaires de formation des pores des toxines formeuses de pores par la spectroscopie de fluorescenceGroulx, Nicolas 08 1900 (has links)
Les toxines formeuses de pore (PFTs) sont des protéines exogènes responsables d’un grand nombre de maladies infectieuses qui perméabilisent les membranes cellulaires de leur hôte. La formation des pores ou l’introduction d’une enzyme dans le cytoplasme peut entrainer l’apparition de symptômes de maladies connues (l’anthrax, le botulisme) et, dans le pire des cas, la mort. Les mécanismes d’infection et de destruction des cellules infectées sont bien caractérisés. Toutefois, l’aspect dynamique des changements de conformation durant le processus de perméabilisation reste à découvrir pour la majorité des toxines formeuses de pore. Le but de cette thèse est d’étudier les mécanismes d’oligomérisation des PFTs, ainsi que la formation des pores à la membrane lipidique grâce à la spectroscopie de fluorescence. Nous avons choisi la toxine Cry1Aa, un bio pesticide produit par le bacille de Thuringe et qui a été rigoureusement caractérisé, en tant que modèle d’étude.
La topologie de la Cry1Aa à l’état actif et inactif a pu être résolue grâce à l’utilisation d’une technique de spectroscopie de fluorescence, le FRET ou transfert d’énergie par résonance entre un fluorophore greffé au domaine formeur de pore (D1) et un accepteur non fluorescent (le DPA ou dipicrylamine) localisé dans la membrane et qui bouge selon le potentiel membranaire. Le courant électrique, ainsi que la fluorescence provenant de la bicouche lipidique membranaire horizontale ont été enregistrés simultanément. De cette manière, nous avons pu localiser toutes les boucles reliant les hélices de D1 avant et après la formation des pores. Dans la forme inactive de la toxine, toutes ces boucles se trouvent du côté interne de la bicouche lipidique, mais dans sa forme active l’épingle α3-α4 traverse du côté externe, alors que toutes les autres hélices demeurent du côté interne. Ces résultats suggèrent que α3-α4 forment le pore.
Nous avons découvert que la toxine change significativement de conformation une fois qu’elle se trouve dans la bicouche lipidique, et que la Cry1Aa attaque la membrane lipidique de l’extérieur, mais en formant le pore de l’intérieur. Dans le but de caractériser la distribution de toxines à chaque extrémité de la bicouche, nous avons utilisé une technique de double FRET avec deux accepteurs ayant des vitesses de translocation différentes (le DPA et l’oxonol) dans la membrane lipidique. De cette manière, nous avons déterminé que la toxine était présente des deux côtés de la bicouche lipidique durant le processus de perméabilisation.
La dynamique d’oligomérisation de la toxine dans une bicouche lipidique sans récepteurs a été étudiée avec une technique permettant le compte des sauts de fluorescence après le photoblanchiment des fluorophore liés aux sous unités composant un oligomère présent dans la bicouche lipidique supportée. Nous avons confirmé de cette manière que la protéine formait ultimement des tétramères, et que cet état résultait de la diffusion des monomères de toxine dans la bicouche et de leur assemblage subséquent.
Enfin nous avons voulu étudier le « gating » de la colicine Ia, provenant de la bactérie E.Coli, dans le but d’observer les mouvements que font deux positions supposées traverser la bicouche lipidique selon le voltage imposé aux bornes de la bicouche. Nos résultats préliminaires nous permettent d’observer un mouvement partiel (et non total) de ces positions, tel que le suggèrent les études de conductances du canal. / Pore forming toxins (PFTs) are exogenous often pathogenic proteins that permeabilize the host membrane. Permeabilization or subsequent introduction of an enzyme leads to health disorders and sometimes death. Although the fundamental infection and destruction mechanisms are known, the underlying molecular basis and their link to the structural information remains undetermined for many pore forming toxins. The purpose of this thesis was to study the mechanisms of oligomerization on the membrane and pore formation of PFTs using fluorescence spectroscopy in planar lipid bilayer. We chose Cry1Aa as the most intensively studied member of Bacillus thuringiensis’s toxins.
In order to probe the topology both in inactive and active congformation, we used Förster resonance energy transfer (FRET) between a fluorophore site-directedly attached to different positions in the pore forming domain (D1) of Cry1Aa toxin and an acceptor compound dipicrylamine (DPA) in the membrane, which moves in response to the membrane potential. Electrical current and fluorescence emission from planar lipid bilayers in a horizontal configuration were simultaneously recorded. We probed all loops between the seven α helices of D1. All of them were located on the inner leaflet of the bilayer prior to pore formation. In the active form, the α3-α4 hairpin were found to translocate back to the outer leaflet of the bilayer, whereas all other positions remained in the inner leaflet, suggesting that α3-α4 are the pore lining helices.
The toxins undergo significant conformational changes once they enter the host membrane, and we found Cry1Aa to attack from the exterior but translocate to the interior. To estimate the distribution of the toxins on either side of the membrane, we used the double-FRET technique. Here, two different acceptors (DPA and oxonol) with different dynamics (time constants) allowed us to determine that approximately equal amounts of the toxin were present on either leaflet during the permeabilization process.
We also studied the oligomerization mechanism of Cry1Aa toxins inserted into supported lipid bilayers using a single subunit counting technique based on the step-wise photodestruction (bleaching) of the attached fluorophores. This system allowed determining the number of subunits composing each oligomer. We found that oligomerization is a highly dynamic process which occurs after insertion into the bilayer by lateral diffusion. The final (likely the pore forming) entity of the toxin is tetrameric.
Finally, we used the same FRET approach to investigate the gating process of two positions of the pore forming domain of colicin Ia, an antibiotic toxin produced by E. coli. These positions were suspected to translocate reversibly from the outer to the inner leaflet during the gating process. In preliminary results, we found that these positions are moving between the two leaflets of the bilayer during pore formation.
|
95 |
Estudo teórico de porfirinas, ftalocianinas e clorinas com ênfase para aplicação em terapia fotodinâmicaBettanin, Fernanda January 2015 (has links)
Orientadora: Profa Dra Paula Homem de Melo / Tese (doutorado) - Universidade Federal do ABC. Programa de Pós-Graduação em Ciência e Tecnologia/Química, 2015. / In this work, it is shown the study of sensitizing molecules of phthalocyanines, porphyrins
and chlorins families, with different ligands and ions complexed (Zn+2, Al+3 and Si+4),
in order to assess, by computational methods, relevant properties for photodynamic therapy
(PDT) application. In the first part of the work, was established an appropriate
methodology to study all proposed molecules quickly and accurately. So it was chosen
the Density Functional Theory and the best funcional-basis set combination found was
B3LYP/LANL2DZ for optimization anf OLYP/6-31g(d) for excited states. The solvent
effects were added by the solvation model IEFPCM, in order to represent the outside
and inside of a lipid bilayer, respectively. In the second part of this work were obtained
properties such as area, volume, dipole, frontier orbitals energy and electronic transitions
of all molucules studied in order to compare them and define which complexed ions and
ligands are able to modify these properties with focus on PDT. The third part studied
dimers formation of some of these molecules, since this formation may affect the eletronic
transitions, invalidating PDT. This study was performed with the DCACP¿s corrections
applied to BLYP functional to simulate dispersion forces, responsible for the dimers
formation. In the fourth part of this work, was simulated by molecular dynamics one
phthalocyanine inserted into a lipid bilayer and, associated with quantum mechanics, it
was possible to acess the electronic states of the molecule. These electronic states were
compared with a second method for theating electronic states along a lipid bilayer with
consists of a dielectric gradient that represents a membrane, in order to choose a more
rapid and efficient method. The last part of this study used the same dielectric gradient
to study the phosphorescence, along the lipid bilayer, showing that this method can be
employed for this kind of property.
|
96 |
Propriedades de vesículas unilamelares gigantes / Properties of Giant Unillamelar VesiclesDavid Domingues Pavanelli 01 September 2006 (has links)
A estabilidade de vesículas unilamelares gigantes (GUVs) foi monitorada através de microscopia de contraste de fase e de fluorescência, com o auxílio de gradientes de açúcares, do fluoróforo 1,3,6,8 pireno tetrasulfonato de sódio (PTS), do supressor de fluorescência cloreto de 1,1\'-dimetil-4,4\'-bipiridínio (MV) e do análogo lipídico fluorescente 2-(12-(7-nitrobenz-2-oxa-1,3-diazol-4-il) amino) dodecanoil-1-hexadecanoil-sn-glicero-3-fosfocolina (NBD-PC). Uma grande variabilidade no comportamento individual das GUVs foi obtida no que tange a: (i) manutenção do meio interno; (ii) interações da bicamada lipídica com superfícies e; (iii) estruturas lipídicas conectadas à bicamada. Os resultados experimentais podem ser explicados pelo aparecimento de poros transientes formados pelo aumento da tensão da bicamada lipídica das GUVs. Após o processo de geração de tensão na bicamada, poros são abertos para relaxação desta tensão, com concomitante efluxo da solução internalizada pela GUV, devido a pressão de Laplace. Com a diminuição do volume interno, a tensão da bicamada é relaxada e o fechamento dos poros guiado pela tensão de linha, minimizando o componente energético de curvatura dos lipídios nas bordas do poro. O modelo de poros transientes explica resultados como troca de massa entre meios interno e externo das GUVs, possibilidade da existência de fluxos unilaterais em GUVs, transitoriedade dos poros, diâmetro limite dos poros e manutenção do meio interno em GUVs após abertura e fechamento de poros. / The stability of giant unilamellar vesicles (GUVs) has been monitored by phase contrast and fluorescence microscopy, using sugar gradients, sodium 1,3,6,8 pirene tetrasulfonate (PTS) as fluorescent probe, 1,1\'-dimethyl-4,4\'-bipiridinium chloride (MV) as fluorescence quencher and 2-(12-(7-nitrobenz-2-oxa-1,3-diazol-4-il) amino) dodecanoyl-1-hexadecanoyl-sn-glicero-3-phosphocholine (NBD-PC) as fluorescent lipid analog. An accentuated variability in the individual behaviour of GUVs was observed as far as (i) stability of encapsulation; (ii) lipid bilayer-surface interactions and; (iii) lipid structures connected to GUVs are concerned. Experimental results can be explained by transient pores formation due to an increase in lipid bilayer tension. After processes of bilayer tension generation, pores are opened, while effluxes of GUVs internal solution are promoted by Laplace pressure. With the internal volume decrease, bilayer tension is relaxed and pores closure guided by line tension, minimizing the energetic component of lipid curvature in pore edges. Transient pores model explains experimental results such as mass exchange between internal and external GUVs media, GUVs effluxes, pores\' lifetime, pores diameter\'s limit and stability of GUV encapsulation after opening and closure of pores.
|
97 |
Physical-chemical understanding of membrane partitioning and permeation at an atomic resolution : towards in silico pharmacology / Compréhension physico-chimique de la partition et de la perméation membranaire à l'échelle atomique : vers la pharmacologie in silicoOssman, Tahani 02 December 2016 (has links)
Le mécanisme d‘interaction d‘un composé xénobiotique avec la membrane est un des facteurs clés qui influence son mécanisme d‘action biologique et donc son action thérapeutique pour un principe actif. Une analyse précise des interactions intermoléculaires à l‘échelle atomique peut être obtenue par dynamique moléculaire, une méthode qui apparait plus que jamais comme une alternative élégante aux techniques expérimentales. Les simulations de dynamique moléculaire permettent d‘évaluer ces interactions avec une résolution temporelle et spatiale difficiles à atteindre avec les méthodes expérimentales. Ces informations constituent une pierre angulaire de la compréhension des mécanismes d‘action des xénobiotiques . Les résultats obtenus corrèlent généralement bien avec les données expérimentales. Dans ce travail théorique, nous avons utilisé des dynamiques moléculaires non -biaisées et biaisées (z-Contraint). Nous avons étudié les modes d‘insertion (positionnement et orientation), les coefficients de partition, et la capacité de différents xénobiotiques à traverser la bicouche lipidique (perméation passive). Plusieurs composés de différentes familles thérapeutiques ont été étudiés (antiviraux, immunosuppresseurs et antioxydants), tous étant utilisés en transplantation d‘organes ; les antioxydants sont étudiés en tant que protecteurs d‘organe contre les phénomènes d‘ischémie -reperfusion. Pour la perméation passive, les profils d‘ énergies, les coefficients de diffusion locaux et la résistance à la traversée ont été calculés pour finalement obtenir des coefficients globaux de perméabilité. Nous avons montré que ces techniques de calcul donnent une description qualitative du processus d‘insertion/perméation, montrant notamment le rôle de différentes propriétés physiques (ex., polarité, charge). Des résultats remarquables ont été obtenus pour les larges molécules. Malgré la taille, ces mol cules peuvent s‘ insérer dans la bicouche lipidique relativement facilement (faibles barrières énergétiques). Par contre, leur diffusion dans les différentes régions de la membrane peut augmenter d‘une manière signifiante. Ce travail donne une confiance accrue dans les méthodes de dynamique moléculaire pour devenir prédictive dans les années avenirs, et aide de façon concrète les pharmacologues dans la recherche de nouvelles stratégies thérapeutiques. / The mechanism of interaction between drugs or any xenobiotic and membrane is one of thekey factors that affect its biological of action, and so its therapeutic activity. A thoroughrationalization of the relationship between the intrinsic properties of the xenobiotics and theirmechanism of interaction with membranes can now be assessed with atomistic details.Molecular dynamics (MD) is a powerful research tool to study xenobiotics-membraneinteractions, which can access time and space scales that are not simultaneously accessibleby experimental methods. Semi-quantitative molecular and thermodynamic descriptions ofthese interactions can be provided using in silico model of lipid bilayers, often in agreementwith experimental measurements.The main goal of our investigation consisted to get in depth insight into the mechanisms ofinteraction/partitioning/insertion/crossing with/in/into/through membrane and drug deliveryusing MD. In this thesis, we have focused on both drugs used in renal transplantation (e.g.,antivirals, immunosuppressants) and antioxidants, which can also be used to protect organsalong the transplantation processes. We have provided a series of clues showing that MDsimulations can tackle the delicate process of drug passive permeation.Both, unbiased and biased MD (z-constraint) simulations have been used to elucidate thexenobiotics-membrane interactions (i.e., positioning and orientation) and to evaluate crossingenergies, diffusion coefficients, and permeability coefficients. These findings led us to drawqualitative structure-permeability relationships (SPR). We have carefully analyzed how thechemical and physical properties of xenobiotics affect the mechanism of interactions andthus permeability. The robustness of these MD-based methodologies has been determinedto qualitatively predict these pharmacological parameters. Hydrophobic compounds showeda favorable partitioning into the lipid bilayer and relatively low Gibbs energy of crossing thecenter of membrane (ΔGcross). Hydrophilic or charged compounds showed partitioning closeto membrane surface, in interaction with the polar head groups and water molecules; this hasbeen shown to dramatically increase ΔGcross. Amphiphilic compounds are intermediatecompounds in terms of membrane insertion/positioning/crossing. It clearly appears that theyshould be analyzed case by case, an analysis for which MD simulations could be particularlysupportive. Also the influence of size at predicting permeation has been studied (i.e.,relatively large drugs were tested). The molecular size has shown no significant influence onΔGcross whereas diffusion coefficients were significantly affected, depending on themembrane regions.
|
98 |
Synthesis and functional properties of triarylamine self-assemblies in conducting devices : electronic, ionic, and water transport systems / Synthèse et propriétés fonctionnelles d'auto-assemblages supramoléculaires de triarylamines : transport d'électrons, d'ions et de molécules d'eauSchneider, Susanne 23 September 2016 (has links)
Ce projet de thèse étudie la synthèse et les propriétés des triarylamines pour le transport d'électrons, d'ions ou de molécules d'eau, en se basant sur les propriétés d'auto-assemblage et de conductivité de certaines triarylamines, récemment découvertes par notre équipe. La thèse débute par une introduction sur la chimie supramoléculaire et les polymères supramoléculaires, et aborde ensuite dans son deuxième chapitre la synthèse et les propriétés d'analogues macrocycliques de triarylamine présentant des propriétés électromagnétiques intéressantes. Dans le chapitre suivant, ce travail de thèse explore l'applicabilité des triarylamines pour le transport biomimétique des ions métalliques et des molécules d'eau à travers des membranes de bicouches lipidiques. Le dernier chapitre de cette thèse s'intéresse ensuite à la fabrication de surfaces conductrices organiques / inorganiques hybrides par dopage de surfaces non conductrices avec des assemblages de triarylamines. / Based on the navel and highly interesting self-assembly properties found for certain triarylamines, together with the resulting conducting properties, this PhD project investigates the synthesis and properties of triarylamines towards the transport of electrons, ions or water molecules. The thesis starts with an introduction on supramolecular chemistry and supramolecular polymers, and then discuss in its second chapter the synthesis and properties of macrocyclic triarylamine analogues with interesting electromagnetic properties. ln the following third chapter this thesis work explores the applicability of triarylamines towards the biomimetic transport of metal ions and water molecules through lipid bilayer membranes. The last chapter of this thesis then deals with the fabrication of hybrid organic/inorganic conducting surfaces through doping of non-conducting surfaces with triarylamine assemblies.
|
99 |
Application of Molecular Simulations and Machine Learning Methods to Study Biological and Metallic Interfaces in Aqueous Environment.Aghaaminiha, Mohammadreza 10 September 2021 (has links)
No description available.
|
100 |
Verknüpfung zwischen Plasmamembran und Zytoskelett / Charakterisierung der Organisation von Ezrin und F-Aktin an artifiziellen Lipidmembranen / Linkage between Plama Membrane and Cytoskeleton / Characterizing the Organization of Ezrin and F-Actin on artificial Lipid BilayersReinermann, Corinna 14 July 2016 (has links)
Die dynamische Verknüpfung zwischen Plasmamembran und dem unterliegenden Zytoskelett der Zelle ist fundamental für zelluläre Prozesse wie Zellmorphogenese, Zellmotilität und Zelladhäsion. Ezrin als Bestandteil der ERM (Ezrin, Radixin, Moesin) Proteinfamilie verbindet L-α-Phosphatidylinositol-4,5-bisphosphat (PIP2) der Plasmamembran mit filamentösem Aktin (F-Aktin) des Zytoskeletts. Die Ezrinbindung an F-Aktin wird reguliert über den Aktivierungsgrad des Proteins, welcher von der N-terminalen PIP2 Bindung und der Phosphorylierung des Threoninrests 567 abhängt. Aufgrund der Bindung an PIP2 und der Phosphorylierung wechselt Ezrin von einer inaktiven, N- und C-terminal assoziierten Konformation in einen aktivierten, geöffneten Zustand, welcher die C-terminale F-Aktinbindung ermöglicht. Ziel dieser Arbeit war es Aspekte der Verknüpfung zwischen Plasmamembran und Zytoskelett zu untersuchen. Basierend auf Bindung von Ezrin an PIP2-haltige artifizielle Lipidmembranen und der anschließenden F-Aktinbindung, wurden Bindungseigenschaften, die Organisation des F-Aktinnetzwerkes und die durch das Aktinnetzwerk beeinflusste Lipidmembranmechanik untersucht. Im ersten Abschnitt dieser Arbeit wurde der molekulare Aktivierungsprozess von Ezrin anhand der Charakterisierung von Bindungsaffinitäten und der Organisation von Ezrin an Lipidmembranen untersucht. Aufgrund einer reduzierten Proteinhöhe und FRET (FÖRSTER-Resonanzenergietransfer)-Effizienz im Fall der vollständigen Aktivierung (PIP2-Bindung und Phosphorylierung) wurde postuliert, dass Ezrin eine weniger dicht gepackte, geöffnete Konformation gebunden an Lipidmembranen ausbildet. Dies ermöglicht dem Protein C-terminal F-Aktin zu binden. Im zweiten Teil der Arbeit wurden Aktinnetzwerke an festkörperunterstützten Lipidmembranen (SLBs) immobilisiert und über Ezrin an PIP2- oder elektrostatisch an 1,2-Dioleoyl-sn-glycero-3-ethylphosphocholin (DOEPC)-haltige SLBs gebunden. Die Netzwerkorganisation wurde mit Hilfe der Fluoreszenzmikroskopie untersucht und unter Berücksichtigung der Immobilisierungsstrategie in Hinblick auf den Einfluss der Anzahl an Verknüpfungspunkten und aktinbindender Proteine (Fascin und α-Actinin) analysiert. Es konnte gezeigt werden, dass beide Immobilisierungsstrategien zu Aktinnetzwerken mit ähnlichen Eigenschaften führten, bezugnehmend auf Maschengröße und Filamentsegmentlänge. Die Aktinnetzwerkdichte konnte direkt über die Anzahl an Verknüpfungspunkten und aktinbindende Proteine (ABPs) reguliert werden, dies demonstriert die physiologische Relevanz der Ergebnisse. Es ist bekannt, dass die Aktindichte in Zellen über PIP2- und ABP-Konzentration gesteuert wird. Im dritten Teil der Arbeit wurde das etablierte Modelsystem auf poröse Substrate übertragen. Unter Kenntnis der vorangegangenen Teile der Arbeit wurde der Einfluss des F-Aktinnetzwerkes auf die Lipidmembranmechanik untersucht. Mit Hilfe der Rasterkraftmikroskopie wurden Indentationsexperimente an porenüberspannenden Lipidmembranen (PSLBs) durchführt, welche zeigten, dass ein aufliegendes F-Aktinnetzwerk die PSLBs versteift. Dies ließ sich auf die reduzierte laterale Mobilität der Lipide innerhalb der PSLBs aufgrund des Aktinnetzwerkes zurückführen, vergleichbar mit dem Picket-Fence-Modell der Plasmamembran bei welchem die Mobilität der Lipide und (Membran-)Proteine, aufgrund der Kompartimentierung der Membran durch das Aktin-Zytoskelett, eingeschränkt ist.
|
Page generated in 0.0394 seconds