Made available in DSpace on 2015-03-26T13:35:18Z (GMT). No. of bitstreams: 1 texto completo.pdf: 5613341 bytes, checksum: b10dc863b3516fce568d5d4513b2ee67 (MD5) Previous issue date: 2012-02-17 / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / In this work, by using the optical tweezers technique, it was possible to study the changes on the mechanical properties of DNA - cisplatin complexes, as a function of some parameters such as the drug diffusion time and its concentration in the sample. A model was proposed in order to explain the behavior of the persistent length as a function of drug concentration, using only the data obtained from single molecule stretching experiments. Such analysis allow us to show that cisplatin binds cooperatively to the DNA molecule. In addition, DNA molecule compactation by the action of the drug, was characterized from studying the kinetics of some mechanical properties such as the radius of gyration and the maximum average end - to - end distance. / Neste trabalho, utilizando a técnica de pinçamento óptico, foi possível estudar as mudanças nas propriedades mecânicas dos complexos DNA - cisplatina, em função de alguns parâmetros de interesse, tais como: o tempo de difusão do fármaco e a concentração do fármaco na amostra. Um modelo foi proposto para explicar o comportamento do comprimento de persistência em função da concentração do fármaco, utilizando-se apenas os dados obtidos a partir dos experimentos de estiramento. Tal análise nos permitiu mostrar que a cisplatina se liga cooperativamente à molécula de DNA. Além disso, a compactação da molécula de DNA pela ação da cisplatina foi caracterizada a partir do estudo da cinética de algumas propriedades mecânicas, tais como: o raio de giro e a distância máxima ponta - à - ponta dos complexos.

Este trabalho é uma contribuição às análises de forças de aprisionamento óptico exercidas sobre partículas esféricas por superposições discretas de feixes de Bessel. Um estudo teórico-numérico foi realizado no regime de óptica geométrica, completando as pesquisas já realizadas com tais feixes e no caso escalar, tanto no regime de Rayleigh quanto através de um formalismo eletromagnético completo. Investigam-se padrões longitudinais de intensidade de possível interesse prático, com potenciais de fornecer múltiplas armadilhas ópticas simultâneas utilizando dois métodos de análise. O primeiro parte da observação de que no regime paraxial todos os raios associados aos feixes se encontram quase paralelos entre si quando se toma como aproximação uma superposição de raios paralelos que incidem completamente sobre um hemisfério do espalhador. Tal método, entretanto, é naturalmente restrito pelas forças transversais. O segundo, que torna mais confiáveis e precisas as predições acerca da componente longitudinal de força, adota procedimentos mais robustos que levam em consideração tanto a contribuição da pressão de radiação (força de espalhamento) quanto a força gradiente devido a gradientes locais de intensidade associados a raios não-paralelos. Assim, acredita-se que este trabalho traz como contribuição um reforço a esta classe específica e promissora de feixes não difrativos como feixes de luz interessantes para aplicações em aprisionamento e micromanipulação óptica. / This work is a contribution to the analyses of optical trapping forces exerted on spherical particles by discrete superpositions of Bessel beams. A theoretical-numerical study has been carried out in the ray optics regime, completing the pre-existing research performed with such beams, in the scalar case, both in the Rayleigh regime and through a complete electromagnetic formalism. We investigate longitudinal intensity patterns of possible practical interest with potential to provide multiple simultaneous optical traps, by using two methods of analysis. The first assumes that, in the paraxial regime, all rays associated to the beams are almost parallel to each other, taking a superposition of parallel rays that are completely incident on a hemisphere of the scatterer as a suitable approximation. Such a method, however, is naturally constrained by the transverse forces. The second one, which makes the predictions about the longitudinal force component more reliable and accurate, adopts more robust procedures that take into consideration the contribution of the radiation pressure (scattering force) as well as the gradient force due to local intensity gradients associated to non-parallel rays. Thus it is hoped that this work will contribute to reinforce this specific and promising class of non-diffractive beams as interesting light beams for applications in optical trapping and micromanipulation.

Um sistema multi-feixe de pinças ópticas baseado na técnica de contraste de fase da ordem zero pode apresentar vantagens significativas sobre sistemas mecanicamente complexos e sensíveis ao alinhamento, e sobre tecnologias que, apesar de serem similares, requerem a customização de componentes ópticos. Porém, ao nosso conhecimento, este sistema até agora não tem sido implementado experimentalmente. Neste trabalho tem-se desenvolvido, como prova de princípio, o primeiro sistema baseado na técnica de contraste de fase da ordem zero gerador de múltiplas pinças ópticas. Esta técnica da óptica de Fourier utiliza conceitos do contraste de fase de Zernike e técnicas de codificação de dois pixels para gerar padrões de intensidade no plano da imagem que são diretamente relacionados a distribuições de fase no plano de entrada do sistema, o qual é formado por um modulador espacial de luz (SLM). Esta dissertação de mestrado descreve detalhadamente os passos tomados com o propósito de utilizar os campos estruturados de luz gerados pelo sistema de contraste de fase da ordem zero para aprisionar esferas de 2 µm de diâmetro de sílica fundida. Neste trabalho apresentamos os fundamentos teóricos do aprisionamento óptico e da técnica de contraste de fase da ordem zero, seguidos pela implementação de experimentos independentes em cada modalidade, e finalmente apresentamos a integração de ambos os sistemas dentro um sistema único de pinças ópticas multi-feixe. Apesar da baixa eficiência óptica do sistema, foi possível implementar um sistema de pinças ópticas duplas. Finalizamos o nosso trabalho na discussão detalhada das limitações do nosso arranjo óptico e comentamos sobre potenciais melhorias para aumentar a rigidez das pinças ópticas e a qualidade geral do sistema. / A multi-beam optical trapping system based on the zero order phase contrast technique may offer significant advantages over mechanically-complex, alignment-sensitive optical trapping systems, and over technologies that, though similar, require the customization of optics components. However, to our knowledge, such a system has not been yet implemented experimentally. We have developed, as a proof of principle, what we think is the first system based on the zero order phase contrast technique to successfully generate multiple optical traps. This Fourier optics technique makes use of existing concepts of Zernike phase contrast and two-pixel encoding techniques to generate intensity patterns in the image plane that are directly related to phase distributions in the input plane, which is comprised by a spatial light modulator (SLM). This master\'s dissertation describes in detail the steps taken towards using the structured light fields generated by a zero order phase contrast system to trap 2 µm diameter fused silica beads. We present the theoretical foundations of optical trapping and the zero order phase contrast technique, followed by the implementation of independent laboratory experiments in each modality, and finally integrate both systems into a single optical setup for multi-beam trapping. In spite of the low optical efficiency of the system, we were able to implement dual optical traps. We finalize by discussing in detail the limitations of our experimental setup in and comment on potential improvements to increase the stiffness of the optical traps and the overall quality of the system.

Orientador: Carlos Lenz Cesar / Tese (doutorado) - Universidade Estadual de Campinas, Instituto de Fisica "Gleb Wataghin" / Made available in DSpace on 2018-08-04T14:59:07Z (GMT). No. of bitstreams: 1 Fontes_Adriana_D.pdf: 3876787 bytes, checksum: 3edd1575e993d4685d7e82c8a3f77cfb (MD5) Previous issue date: 2004 / Resumo: Não informado / Abstract: Not informed. / Doutorado / Física / Doutor em Ciências

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Optical tweezers are a sensitive position and force transducer widely employed in physics and biology. In a focussed laser, forces due to radiation pressure enable to trap and manipulate small dielectric particles used as probes for various experiments. For sensitive biophysical measurements, microspheres are often used as a handle for the molecule of interest. The force range of optical traps well covers the piconewton forces generated by individual biomolecules such as kinesin molecular motors. However, cellular processes are often driven by ensembles of molecular machines generating forces exceeding a nanonewton and thus the capabilities of optical tweezers. In this thesis I focused, fifirst, on extending the force range of optical tweezers by improving the trapping e fficiency of the probes and, second, on applying the optical tweezers technology to understand the mechanics of molecular motors. I designed and fabricated photonically-structured probes: Anti-reflection-coated, high-refractive-index, core-shell particles composed of titania. With these probes, I significantly increased the maximum optical force beyond a nanonewton. These particles open up new research possibilities in both biology and physics, for example, to measure hydrodynamic resonances associated with the colored nature of the noise of Brownian motion. With respect to biophysical applications, I used the optical tweezers to study the mechanics of single kinesin-8. Kinesin-8 has been shown to be a very processive, plus-end directed microtubule depolymerase. The underlying mechanism for the high processivity and how stepping is affected by force is unclear. Therefore, I tracked the motion of yeast (Kip3) and human (Kif18A) kinesin-8s with high precision under varying loads. We found that kinesin-8 is a low-force motor protein, which stalled at loads of only 1 pN. In addition, we discovered a force-induced stick-slip motion, which may be an adaptation for the high processivity. Further improvement in optical tweezers probes and the instrument will broaden the scope of feasible optical trapping experiments in the future.

No description available.

The Maxwell–Boltzmann distribution is a hallmark of statistical physics in thermodynamic equilibrium linking the probability density of a particle’s kinetic energies to the temperature of the system that also determines its configurational fluctuations. This unique relation is lost for Hot Brownian Motion, e.g., when the Brownian particle is constantly heated to create an inhomogeneous temperature in the surrounding liquid. While the fluctuations of the particle in this case can be described with an effective temperature, it is not unique for all degrees of freedom and suggested to be different at different timescales. In this work, we report on our progress to measure the effective temperature of Hot Brownian Motion in the ballistic regime. We have constructed an optical setup to measure the displacement of a heated Brownian particle with a temporal resolution of 10 ns giving a corresponding spatial resolution of about 23 pm for a 0.92 μm PMMA particle in water. Using a goldcoated polystyrene (AuPS) particle of 2.15 μm diameter we determine the mean squared displacement of the particle over more than six orders of magnitude in time. Our data recovers the trends for the effective temperature at long timescales, yet shows also clear effects in the region of hydrodynamic long time tails.

No description available.

No description available.