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Immunoglobulin gene analysis in different B cell lymphomas : with focus on cellular origin and antigen selection /Thorsélius, Mia, January 2004 (has links)
Diss. (sammanfattning) Uppsala : Univ., 2004. / Härtill 5 uppsatser.
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Mécanismes de réparation de l'ADN et de maintien de la stabilité génomique lors de la diversification des immunoglobulines / DNA repair and maintenance of genome stability during immunoglobulin diversificationGaudot, Léa 25 November 2016 (has links)
L’enzyme Activation-induced cytidine deaminase (AID) initie la diversification des immunoglobulines (Ig) par l’induction de dommages à l’ADN. Alors que les lésions induites aux gènes des Ig sont cruciales pour l’établissement de réponses immunes hautement spécifiques et adaptées, ce même type de lésions provoquées ailleurs dans le génome contribue à la transformation cellulaire et à l’apparition de cancer. Les mécanismes impliqués dans la protection de l’intégrité génomique des cellules B restent à définir. D’une part, nous avons développé une approche de protéomique locus-unique en couplant une technique d’identification de protéine par biotinylation de proximité avec l’outil d’édition du génome CRISPR/Cas9. Cette technique innovante, dont nous avons fait la preuve de principe pour des loci abondants, pourra être utilisée pour identifier le protéome des différentes cibles génomiques d’AID. D’autre part, nous avons caractérisé le rôle de Parp3, Parp9 et Med1, identifiées comme partenaires d’AID, éclairant ainsi les mécanismes qui contrôlent l’activité d’AID et la réparation des lésions induites par AID lors de la diversification des Ig. / Activation-induced cytidine deaminase (AID) initiates immunoglobulin (Ig) diversification by inducing DNA damage. While on-target lesions are crucial for mounting highly specific and adaptive immune responses, off-target lesions contribute to malignant cell transformation. Despite its implications, the events following AID recruitment that enforce genome integrity in B cells remain poorly defined. It is not understood why multiple non-Ig loci bound by AID are not mutated or why AID-induced DNA lesions may lead to mutations or DNA breaks. To address this question, we developed a single-locus proteomic approach coupling proximity-dependent protein identification and genome editing (CRISPR/Cas9) to identify and compare the proteins recruited at individual genomic loci bound by AID. We performed the proof of principle of this innovative tool by identifying the proteome of abundant genomic loci. On the other hand, we functionally characterized Parp3, Parp9 and Med1, identified as AID partners, revealing novel mechanisms that tightly control AID activity and DNA repair during Ig diversification.
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L’hypermutation somatique des gènes des immunoglobulines : corrélation avec le cycle cellulaire et contribution des voies de réparation mutagènes / Somatic hypermutation of immunoglobulin genes : correlation with the cell cycle and contribution of mutagenic repair pathwaysZivojnovic, Marija 26 November 2013 (has links)
Pour augmenter l’affinité des anticorps sécrétés en réponse à un antigène, les gènes d’immunoglobulines subissent l’hypermutation somatique, une mutagénèse adaptative initiée par l’action de l’activation-induced cytidine deaminase (AID). L’uracile provenant de la désamination des cytosines par cette enzyme est réparé de façon erronée par la suite : si il est pris en charge par l’uracile N-glycosylase (UNG), enzyme à l’origine d’une réparation poursuivie habituellement par des composantes de la voie du "base-excision repair", il reste à sa place un site abasique franchissable par les ADN polymérases translésionnelles avec un taux d’erreur très élevé. Si le mésappariement U:G est reconnu par la voie du « mismatch repair », le brin d’ADN entourant le U est dégradé puis néo-synthétisé par une autre ADN polymérase translésionnelle particulièrement mutagène en face des bases T et A, la polymérase eta. Nous avons proposé que le choix entre ces deux voies de réparation mutagènes puisse être régulé en fonction du cycle cellulaire: les mutations des paires A:T seraient introduites dans les gènes d’immunoglobulines par la voie du mismatch repair en phase G1 alors que la voie erronée d’UN introduirait les autres mutations lors de la phase S. Nous sommes parvenus à restreindre l’activité de l’AID à deux parties distinctes du cycle, la phase G1 ou les phases S/G2/M, et nous avons établi le fonctionnement de ce système dans le modèle murin. De façon surprenante, nous avons détecté un taux de mutation proche du bruit de fond chez toutes les souris dont l’AID opérait uniquement dans les phases S/G2/M. Par contre, les souris dont l’AID a été restreinte en G1 présentaient un spectre de mutation diversifié sur les quatre bases et similaire au normal. A la lumière de ces résultats, nous proposons que les lésions introduites tout au long du cycle par l’AID soient diversifiées par les acteurs de l’hypermutation somatique pendant la phase G1, alors que les lésions seraient soit réparées de façon fidèle en dehors de cette phase-là, soit de faible impact. Afin d’expliquer le biais de brin dans l’hypermutation somatique observé pour les mutations sur les bases A :T, nous proposons pour l’ADN polymérase eta un rôle inhabituel de réparation du brin portant la « lésion », et non de synthèse translésionnelle classique en face de cette lésion. Nous avons analysé le profil, le taux et la distribution des mutations introduites par Pol eta sur un oligonucléotide cible pour l’hypermutation, qui a été inséré au locus des immunoglobulines et utilisé pour l’établissement des souris knock-in avec un fond génétique déficient ou non en UNG. Nos résultats, selon lesquels Pol eta continue de cibler le brin codant indépendamment de la localisation des « points d’entrée » en forme d’uraciles, contredisent les rapports déjà publiés sur ce sujet. De façon inattendue, nos résultats mettent en évidence une coopération entre les voies UNG et et les activités endonucléasique du mismatch repair, fournissant la cassure simple brin qui va permettre d'initier la resynthèse à fort taux d'erreur à l'origine de la mutagénèse A/T. Ces résultats résolvent aussi le paradoxe de la non-participation apparente du complexe effecteur du mismatch repair (Mlh1/Pms2) dans le processus d'hypermutation, en proposant qu'il fonctionne en redondance avec UNG, dans une distribution des tâches qui dépend du contexte de la séquence ciblée et de la densité du processus de deamination. / Somatic hypermutation is a localized mutagenesis, essentially targeted to the immunoglobulin V region, and occurring during the immune response. This process is triggered by AID (activation-induced cytidine deaminase) that deaminates cytosines into uracils at the Ig locus. This lesion is further processed by Ung or the Msh2-Msh6 complex, with an abnormal outcome for both pathways that results in an increased mutation load. The Msh2-Msh6 complex recruits Pol eta to generate a short patch DNA synthesis with mostly mutations at A and T bases. To get further insight into this error-prone repair process, we have generated hypermutation substrates consisting in an A/T oligonucleotide of 100 bases with or without 3 cytidines in its core region, inserted by knock-in at the heavy chain Ig locus. Our aim was to compare the mutation frequency, distribution and mutation profile of substrates with C on either the coding or the non-coding strand on WT or Ung-deficient background, taking into account that Pol eta is a preferred A to G mutator. Our results suggest that Pol eta resynthesis may proceed on the coding strand, whatever the strand localization of the uracil, thus contradicting previous reports. Unexpectedly, our results revealed a cooperation between the Ung pathway and the endonuclease activity of the mismatch repair, with both of them providing the single-strand nick that allows initiation of the error-prone process that generates mutations at A and T bases. These results resolve the apparent paradox of the non-involvement of the mismatch repair effector complex (Mlh1-Pms2) in hypermutation, by proposing that it works redundantly with UNG, in a distribution of tasks that will depend upon the sequence context and the intensity of deamination activity. We have also constructed cell cycle restricted mutants of AID, to study in which phase of the cell cycle this atypical, mismatch repair driven, error-prone synthesis is taking place. Using the Fucci restriction system (degrons based on Cdt1 or Geminin peptides), we have generated AID constructs with proper restriction in either G1 or S/G2/M phases. These retroviral constructs have been used to transduce mouse hematopoietic stem cells from either AID -deficient mice and to restore immunodeficient animals, in order to analyze their immune response. We report that restriction of AID expression in S/G2/M part of the cycle yielded only background mutation frequency, while AID operating in the G1 phase is able to generate an equal proportion of A/T and G/C mutations at the Ig loci, thus demonstrating that uracils generated in G1 are substrates for both Ung- and mismatch repair pathways.
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ROLE OF FDCs AND FDC ACTIVATION IN PROMOTING HUMORAL IMMUNITY INCLUDING RESPONSES TO T-DEPENDENT ANTIGENS IN THE ABSENCE OF T CELLSEl, Sayed Rania 16 June 2009 (has links)
Follicular dendritic cells (FDCs) reside in primary B-cell follicles and in the light zones of germinal centers (GCs) in secondary follicles, where their dendrites interdigitate forming extensive networks intimately interacting with B-cells. In GCs, FDCs can be found at the edges attached to the supporting reticular fibers. They trap and arrange immune complexes (ICs) in vivo and in vitro in a periodic manner with 200–500Å spacing and provide both antigen-specific and non-specific accessory signals to B-cells. FDCs exist in resting and activated states, with two characteristically different phenotypes. In their activated state, FDCs upregulate the expression of accessory molecules and cytokines important in the FDC-B cell interaction in GCs. We sought to determine the mechanisms influencing the transition of FDCs from a resting to an activated state in GCs and their impact on T-cell dependent (TD) and independent (TI)-GC reactions (GCRs). We found that IC-FDC interactions via FDC-FcgammaRIIB induce the upregulation of FDC-FcgammaRIIB, -ICAM-1, and -VCAM-1, at both the protein and mRNA levels. We also reported for the first time the expression of TLR-4 on FDCs. Moreover, engagement of FDC-TLR4 with LPS activated NF-kappaB, up-regulated expression of important FDC-accessory molecules, including FcgammaRIIB, ICAM-1, and VCAM-1, and enhanced FDC accessory activity in promoting recall IgG responses. Moreover, IC-activated FDCs produced IL-6 and FDC-IL-6 promoted GCRs, somatic hypermutation (SHM) and IgG production. Further, we reported that binding of FDCs to collagen coated surfaces induced restoration of their dendritic processes and networks in vitro. In addition, we designed an FDC-supported in vitro model capable of induction and assessment of primary human antibody responses to protein antigens characterized by class-switching and affinity maturation. Uniquely, we generated TI immune responses to TD protein Ags in the complete absence of T cell help in vivo and in vitro. In the presence of FDC-associated second signals such as BAFF and C4BP, FDC- FcgammaRIIB-periodically trapped-ICs induced the production of Ag-specific IgM, GC-development and plasmablast-differentiation in anti-Thy-1-pretreated nude mice. Purified murine and human B cells cultured in vitro with IC-bearing FDCs also showed the production of antigen–specific IgM within just 48 h.
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Papel das proteínas XPD e DNA polimerase eta nas respostas de células humanas a danos no genoma / Role of XPD and DNA polymerase eta in the response of human cells to DNA damageLerner, Leticia Koch 02 July 2014 (has links)
A via de Reparo por Excisão de Nucleotídeos (NER) é responsável pelo reparo das lesões causadas pela luz ultravioleta (UV) e de outras lesões capazes de distorcer a dupla hélice, bloqueando a replicação e a transcrição. Os pacientes que apresentam as síndromes recessivas raras Xeroderma Pigmentosum (XP), tricotiodistrofia (TTD) e síndrome de Cockayne (CS) possuem mutações em algum dos 11 genes relacionados ao NER e à transcrição basal. Mutações na proteína XPD levam ao surgimento de diferentes fenótipos: XP, TTD, XP/CS ou COFS (Cerebro-Oculo-Facio-Skeletal Syndrome), uma forma rara de CS. Os pacientes XP apresentam alta incidência de câncer de pele, o que não ocorre com os pacientes TTD e CS, além de poderem apresentar perda neuronal progressiva, enquanto todos os CS e TTD apresentam uma diminuição na mielinização do cérebro. As neuropatologias são provavelmente associadas a problemas no reparo de danos endógenos no DNA das células nervosas. Diversos trabalhos mostraram o envolvimento do NER no reparo desses danos, os quais pensava-se serem reparados apenas por outro mecanismo, o Reparo por Excisão de Base. Neste trabalho mostramos que fibroblastos de pacientes XP-D, XP-D/CS e TTD, portadores de mutações em XPD, são sensíveis ao estresse oxidativo induzido pelo tratamento com azul de metileno fotoativado, apresentando bloqueio prolongado no ciclo celular e permanência da sinalização de danos ao DNA. A complementação das diferentes linhagens com o gene XPD/ERCC2 foi capaz de restaurar a sobrevivência celular. Foram detectadas diferenças importantes na capacidade de reparo/retomada da transcrição após danos gerados por estresse oxidativo em DNA plasmidial, além da ativação de vias diferentes de morte celular: fibroblastos XP-D apresentam maior capacidade de reparo e apresentam morte por apoptose após estresse oxidativo, enquanto os fibroblastos XP-D/CS e TTD apresentam menor capacidade de reparo ativação de mais de uma via de morte celular (apoptose e necrose), diferenças que podem estar ligadas ao fenótipo dos pacientes. Mutações no gene codificante para a DNA polimerase n, POLH, estão associadas à forma variante de XP (XP-V). Pol n é uma polimerase especializada na síntese translesão (TLS) de fotoprodutos, além de estar implicada na TLS de outros tipos de lesões como bases oxidadas, e em vias não relacionadas à TLS como a hipermutação somática e à replicação de regiões de DNA com arquiteturas não-canônicas. Neste trabalho mostramos que os fibroblastos de pacientes XP-V apresentam sensibilidade ao estresse oxidativo. Mostramos uma indução da proteína pol n em fibroblastos primários após danos genotóxicos, associada ao aumento da capacidade de lidar com a parada na forquilha de replicação, possibilitando a continuidade da replicação do DNA e ao aumento da sobrevivência celular. Mostramos uma diferença na estabilidade genômica nos genes das imunoglobulinas dos pacientes XP-V idosos em comparação com os pacientes jovens e controles de idade pareada, mostrando que a ausência dessa polimerase pode estar ligada ao aumento da instabilidade genômica nesses genes / The Nucleotide Excision Repair (NER) pathway is responsible for the repair of UV photoproducts and other bulky lesions that block both replication and transcription. Patients with the rare recessive disorders Xeroderma Pigmentosum (XP), trichothiodystrophy (TTD) and Cockayne Syndrome (CS) carry mutations in one of the 11 NER genes, linked to repair and basal transcription. Mutations in XPD lead to different phenotypes: XP, TTD, XP/CS or COFS (Cerebro-Oculo-Facio-Skeletal Syndrome), a rare form of CS. XP patients have high incidence of skin cancer, which does not occur in TTD or CS patients, although ther may present neurodegeneration, while all CS and TTD patients have neurodevelopmental symptoms linked to dysmielynation. The pathology of these neurological diseases is probably associated with deficient repair of DNA lesions in nervous cells, generated by endogenous processes. Many groups including ours have demonstrated the involvement of NER in the repair of these lesions, previously thought to be exclusively repaired by Base Excision Repair. In this work we show high sensitivity of both primary and transformed XP-D, XP-D/CS and TTD human fibroblasts in response to oxidative stress generated by photoactivated methylene blue, with prolonged cell cycle arrest and DNA damage signaling. The complementation of the three different cell lines with the XPD/ERCC2 gene was able to restore cell survival. We detected important differences in repair capacity/transcription resumption after damage generated by oxidative stress in plasmid DNA, besides the activation of different cell death pathways: XP-D cells have higher repair capacity and die by apoptosis, while XP-D/CS and TTD cells have little repair capacity and activate more than one death pathway (apoptosis and necrosis). We believe these differences can be related to the patients\' phenotypes. Mutations in DNA polymerase n coding gene, POLH, are associated with the variant form of XP (XP-V). Pol n is a translesion synthesis (TLS) polymerase specialized in the TLS past CPD photoproducts, besides other lesions like oxidized bases, and in other processes like somatic hypermutation and DNA replication in structured regions. In this work we show XP-V human fibroblasts are sensitive to oxidative stress. We detected an induction of pol n after genotoxic stress in primary cells, associated with increased ability to deal with the stalled replication fork, and consequently to DNA replication restart and cell survival. In addition, we detected a difference in genomic stability in immunoglobulin genes in aged XP-V patients in comparison to both young patients and age-matched controls, showing the absence of this polymerase may be linked to increased genomic instability in these genes
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Importance of the HSP90 molecular chaperoning pathway for antibody diversification by determining AID stabilityOrthwein, Alexandre 01 1900 (has links)
La protéine AID (déaminase induite par l’activation) joue un rôle central dans la
réponse immunitaire adaptative. En désaminant des désoxycytidines en désoxyuridines au
niveau des gènes immunoglobulines, elle initie l’hypermutation somatique (SHM), la
conversion génique (iGC) et la commutation isotypique (CSR). Elle est essentielle à une
réponse humorale efficace en contribuant à la maturation de l’affinité des anticorps et au
changement de classe isotypique. Cependant, son activité mutagénique peut être oncogénique et
causer une instabilité génomique propice au développement de cancers et de maladies
autoimmunes. Il est donc critique de réguler AID, en particulier ses niveaux protéiques, pour
générer une réponse immunitaire efficace tout en minimisant les risques de cancer et d’autoimmunité.
Un élément de régulation est le fait qu’AID transite du cytoplasme vers le noyau
mais reste majoritairement cytoplasmique à l’équilibre. AID est par ailleurs plus stable dans le
cytoplasme que dans le noyau, ce qui contribue à réduire sa présence à proximité de l’ADN.
Le but de cette thèse était d’identifier de nouveaux partenaires et déterminants d’AID
régulant sa stabilité et ses fonctions biologiques. Dans un premier temps, nous avons identifié
AID comme une nouvelle protéine cliente d’HSP90. Nous avons montré qu’HSP90 interagit
avec AID dans le cytoplasme, ce qui empêche la poly-ubiquitination d’AID et sa dégradation
par le protéasome. En conséquence, l’inhibition d’HSP90 résulte en une diminution
significative des niveaux endogènes d’AID et corrèle avec une réduction proportionnelle de ses
fonctions biologiques dans la diversification des anticorps mais aussi dans l’introduction de
mutations aberrantes. Dans un second temps, nous avons montré que l’étape initiale dans la
stabilisation d’AID par la voie de chaperonnage d’HSP90 dépend d’HSP40 et d’HSP70. En
particulier, la protéine DnaJa1, qui fait partie de la famille des protéines HSP40s, limite la
stabilisation d’AID dans le cytoplasme. La farnésylation de DnaJa1 est importante pour
l’interaction entre DnaJa1 et AID et moduler les niveaux de DnaJa1 ou son état de farnésylation
impacte à la fois les niveaux endogènes d’AID mais aussi la diversification des anticorps. Les
souris DNAJA1-/- présentent une réponse immunitaire compromise en cas d’immunisation, qui
est dûe à des niveaux réduits d’AID et un défaut de commutation de classe. Dans un troisième
temps, nous avons montré que la protéine AID est intrinsèquement plus instable que sesprotéines paralogues APOBEC. Nous avons identifié l’acide aspartique en seconde position
d’AID ainsi qu’un motif semblable au PEST comme des modulateurs de la stabilité d’AID. La
modification de ces motifs augmente la stabilité d’AID et résulte en une diversification des
anticorps plus efficace.
En conclusion, l’instabilité intrinsèque d’AID est un élément de régulation de la
diversification des anticorps. Cette instabilité est en partie compensée dans le cytoplasme par
l’action protective de la voie de chaperonnage DnaJa1-HSP90. Par ailleurs, l’utilisation
d’inhibiteurs d’HSP90 ou de farnésyltransférases pourrait être un outil intéressant pour la
modulation indirecte des niveaux d’AID et le traitement de lymphomes/leucémies et de
maladies auto-immunes causés par AID. / Activation induced deaminase (AID) plays a central role in adaptive immunity. AID
deaminates deoxycytidine to deoxyuridine in defined regions of the immunoglobulin (Ig) genes
and initiates somatic hypermutation (SHM), gene conversion (iGC) and class switch
recombination (CSR). While being essential for an effective immune response by underpinning
antibody affinity maturation and isotype switching, the mutagenic activity of AID can also be
oncogenic and causes genomic instability leading to the development of cancer, or exacerbate
autoimmune diseases. Therefore, AID regulation, including the control of its protein level, is
central to balancing effective immunity with cancer/autoimmunity. Notably, AID shuttles
between the cytoplasm and the nucleus but is predominantly cytoplasmic at steady-state, with
cytoplasmic AID being much more stable than nuclear AID. These regulatory steps contribute
to limit the exposure of the genome to AID but their mechanisms are unknown.
This thesis aimed at identifying AID partners and intrinsic determinants regulating its
stability and modulating its biological functions. Firstly, we identified AID as a novel HSP90
client protein. We demonstrated that HSP90 interacts with AID in the cytoplasm and prevents
its polyubiquitination and subsequent proteasomal degradation. Consequently, HSP90
inhibition results in a significant reduction of endogenous AID levels and correlates with a
proportional reduction in both AID-mediated antibody diversification and off-target mutations.
Secondly, we showed that the first step in the HSP90 molecular chaperoning pathway and
stabilization is the interaction of AID with the HSP40 and HSP70 system. In fact, a specific
HSP40 protein, DnaJa1, is the limiting step in cytoplasmic AID stabilization. DnaJa1
farnesylation is required for DnaJa1-AID interaction and modulation of DnaJa1 levels or its
farnesylation impacts endogenous AID levels and antibody diversification. In vivo, DnaJa1-
deficient mice display compromized response to immunization, resulting from reduced AID
protein levels and isotype switching. Thirdly, we found that AID is intrinsically less stable
than its APOBEC paralogs. We identified the AID N-terminal aspartic acid residue at position
two and an internal PEST-like motif as destabilizing modulators of AID protein turnover.
Disruption of these motifs increases AID protein stability and antibody diversification.We conclude that AID’s intrinsic instability directly contributes to regulating antibody
diversification. This intrinsic instability is at least partially compensated for in the cytoplasm by
the protective action of the DnaJa1-HSP90 molecular chaperoning pathway. Pharmacologically
targeting AID in an indirect way, by using HSP90 or farnesyltransferase inhibitors, could be
relevant for treating some AID-associated lymphomas/leukemias and/or autoimmune diseases.
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Importance of the HSP90 molecular chaperoning pathway for antibody diversification by determining AID stabilityOrthwein, Alexandre 01 1900 (has links)
No description available.
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Papel das proteínas XPD e DNA polimerase eta nas respostas de células humanas a danos no genoma / Role of XPD and DNA polymerase eta in the response of human cells to DNA damageLeticia Koch Lerner 02 July 2014 (has links)
A via de Reparo por Excisão de Nucleotídeos (NER) é responsável pelo reparo das lesões causadas pela luz ultravioleta (UV) e de outras lesões capazes de distorcer a dupla hélice, bloqueando a replicação e a transcrição. Os pacientes que apresentam as síndromes recessivas raras Xeroderma Pigmentosum (XP), tricotiodistrofia (TTD) e síndrome de Cockayne (CS) possuem mutações em algum dos 11 genes relacionados ao NER e à transcrição basal. Mutações na proteína XPD levam ao surgimento de diferentes fenótipos: XP, TTD, XP/CS ou COFS (Cerebro-Oculo-Facio-Skeletal Syndrome), uma forma rara de CS. Os pacientes XP apresentam alta incidência de câncer de pele, o que não ocorre com os pacientes TTD e CS, além de poderem apresentar perda neuronal progressiva, enquanto todos os CS e TTD apresentam uma diminuição na mielinização do cérebro. As neuropatologias são provavelmente associadas a problemas no reparo de danos endógenos no DNA das células nervosas. Diversos trabalhos mostraram o envolvimento do NER no reparo desses danos, os quais pensava-se serem reparados apenas por outro mecanismo, o Reparo por Excisão de Base. Neste trabalho mostramos que fibroblastos de pacientes XP-D, XP-D/CS e TTD, portadores de mutações em XPD, são sensíveis ao estresse oxidativo induzido pelo tratamento com azul de metileno fotoativado, apresentando bloqueio prolongado no ciclo celular e permanência da sinalização de danos ao DNA. A complementação das diferentes linhagens com o gene XPD/ERCC2 foi capaz de restaurar a sobrevivência celular. Foram detectadas diferenças importantes na capacidade de reparo/retomada da transcrição após danos gerados por estresse oxidativo em DNA plasmidial, além da ativação de vias diferentes de morte celular: fibroblastos XP-D apresentam maior capacidade de reparo e apresentam morte por apoptose após estresse oxidativo, enquanto os fibroblastos XP-D/CS e TTD apresentam menor capacidade de reparo ativação de mais de uma via de morte celular (apoptose e necrose), diferenças que podem estar ligadas ao fenótipo dos pacientes. Mutações no gene codificante para a DNA polimerase n, POLH, estão associadas à forma variante de XP (XP-V). Pol n é uma polimerase especializada na síntese translesão (TLS) de fotoprodutos, além de estar implicada na TLS de outros tipos de lesões como bases oxidadas, e em vias não relacionadas à TLS como a hipermutação somática e à replicação de regiões de DNA com arquiteturas não-canônicas. Neste trabalho mostramos que os fibroblastos de pacientes XP-V apresentam sensibilidade ao estresse oxidativo. Mostramos uma indução da proteína pol n em fibroblastos primários após danos genotóxicos, associada ao aumento da capacidade de lidar com a parada na forquilha de replicação, possibilitando a continuidade da replicação do DNA e ao aumento da sobrevivência celular. Mostramos uma diferença na estabilidade genômica nos genes das imunoglobulinas dos pacientes XP-V idosos em comparação com os pacientes jovens e controles de idade pareada, mostrando que a ausência dessa polimerase pode estar ligada ao aumento da instabilidade genômica nesses genes / The Nucleotide Excision Repair (NER) pathway is responsible for the repair of UV photoproducts and other bulky lesions that block both replication and transcription. Patients with the rare recessive disorders Xeroderma Pigmentosum (XP), trichothiodystrophy (TTD) and Cockayne Syndrome (CS) carry mutations in one of the 11 NER genes, linked to repair and basal transcription. Mutations in XPD lead to different phenotypes: XP, TTD, XP/CS or COFS (Cerebro-Oculo-Facio-Skeletal Syndrome), a rare form of CS. XP patients have high incidence of skin cancer, which does not occur in TTD or CS patients, although ther may present neurodegeneration, while all CS and TTD patients have neurodevelopmental symptoms linked to dysmielynation. The pathology of these neurological diseases is probably associated with deficient repair of DNA lesions in nervous cells, generated by endogenous processes. Many groups including ours have demonstrated the involvement of NER in the repair of these lesions, previously thought to be exclusively repaired by Base Excision Repair. In this work we show high sensitivity of both primary and transformed XP-D, XP-D/CS and TTD human fibroblasts in response to oxidative stress generated by photoactivated methylene blue, with prolonged cell cycle arrest and DNA damage signaling. The complementation of the three different cell lines with the XPD/ERCC2 gene was able to restore cell survival. We detected important differences in repair capacity/transcription resumption after damage generated by oxidative stress in plasmid DNA, besides the activation of different cell death pathways: XP-D cells have higher repair capacity and die by apoptosis, while XP-D/CS and TTD cells have little repair capacity and activate more than one death pathway (apoptosis and necrosis). We believe these differences can be related to the patients\' phenotypes. Mutations in DNA polymerase n coding gene, POLH, are associated with the variant form of XP (XP-V). Pol n is a translesion synthesis (TLS) polymerase specialized in the TLS past CPD photoproducts, besides other lesions like oxidized bases, and in other processes like somatic hypermutation and DNA replication in structured regions. In this work we show XP-V human fibroblasts are sensitive to oxidative stress. We detected an induction of pol n after genotoxic stress in primary cells, associated with increased ability to deal with the stalled replication fork, and consequently to DNA replication restart and cell survival. In addition, we detected a difference in genomic stability in immunoglobulin genes in aged XP-V patients in comparison to both young patients and age-matched controls, showing the absence of this polymerase may be linked to increased genomic instability in these genes
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