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Avaliação do potencial citotóxico, genotóxico e mutagênico das águas do Rio Preto na área de influência da região de São José do Rio Preto/SP. -Maschio, Lucilene Regina. January 2009 (has links)
Resumo: Devido às crescentes expansões demográficas e industriais observadas nas últimas décadas, o meio ambiente tem recebido uma carga significativamente crescente de efluentes domésticos, industriais e agrícolas, causando impactos severos nos ecossistemas e um potencial comprometimento à saúde humana. Dentre os efluentes domésticos, podemos citar uma gama de poluentes, tais como químicos de diversas categorias, além de contaminações por agentes biológicos diversos. Já os efluentes industriais contêm poluentes orgânicos e/ou inorgânicos, dependendo da atividade industrial. Baseando-se nestes dados, este trabalho teve como objetivo investigar, por meio de ensaios biológicos com dois organismos-teste, a possível presença de contaminantes com potencial citotóxico, genotóxico e mutagênico, que são despejados ao longo do rio Preto, inclusive na Represa Municipal de São José do Rio Preto. O material biológico utilizado neste estudo constituiu-se de sementes de Allium cepa (cebola) e peixes da espécie Oreochromis niloticus (Tilápia). Coletas de águas foram realizadas, sazonalmente, nos meses de agosto de 2006 e 2007 (estação seca) e março de 2007 e 2008 (estação chuvosa), em seis pontos distintos: Ponto 1 (P1), 8 km antes do represamento; Ponto 2 (P2), 1 km antes do represamento; Ponto 3 (P3), local de despejo do esgoto; Ponto 4 (P4), margem oposta do despejo do esgoto; Ponto 5 (P5), saída do represamento; Ponto 6 (P6), 1 km após o represamento. Análises químicas foram realizadas para todas as coletas realizadas. Para a realização do estudo, 100 sementes de Allium cepa foram submetidas à germinação, em placa de Petri, em amostras de águas coletadas nos seis diferentes pontos do rio Preto, em água ultra pura (controle negativo) e em uma substância reconhecidamente aneugênica (Trifluralina - controle positivo), sempre à temperatura ambiente... (Resumo completo, clicar acesso eletrônico abaixo) / Abstract: Due to increasing population and industrial expansion observed in recent decades, the environment has received a significant increased burden of domestic industrial and agricultural sewerage, which can cause severe impacts on ecosystems, and a potential damage to human health as well. A wide range of harmful pollutants can be found in domestic effluent, such as chemicals from various categories, in addition to contamination by various biological agents. On the other hand, industrial effluents contain organic and / or inorganic pollutants, depending on industrial activity. Based on these data, this study aimed to investigate, by means of biological tests with two test-organism, the possible presence of contaminants with cytotoxic, genotoxic and mutagenic potential, which are dumped along the Preto river, an important river that flows in the region of Sao Jose do Rio Preto/SP. The biological material used in this study consisted of seeds of Allium cepa (onion) and one specie of fish (Tilapia: Oreochromis niloticus). Water samples were taken seasonally in August 2006 and 2007 (dry season) and March 2007, and 2008 (rainy season), in six distinct sites: Site 1 (S1), 8 km before the damming, Site 2 (S2), 1 km before the damming, Site 3 (S3), place of sewerage discharge; Site 4 (S4), opposite margin of sewage discharge, Site 5 (S5), end of the damming; Site 6 (S6) 1 km after damming. Chemical analyses were performed for all collected samples. For the study, 100 seeds of A. cepa were submitted to germination in Petri dishes with samples water from six different sites of the Preto river, Ultra pure water (negative control), and with an aneugenic substance (Trifluralin - positive control). For most of collection points and periods studied, root meristems cells of A. cepa, exposed to water samples collected along the Preto river, showed no significant differences... (Complete abstract click electronic access below) / Orientador: Maria Aparecida Marin-Morales / Coorientador: Maria Tecília Vilela de Azeredo-Oliveira / Banca: Regina Teresa Rosim Monteiro / Banca: Carmem Silvia Fontanetti Christofoletti / Banca: Eduardo Alves de Almeida / Banca: Mary Massumi Itoyama / Doutor
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Efeito antimutagênico, antigenotóxico, antiobesidade e antioxidante da Ilex paraguariensis (erva-mate) / Antimutagenic, antigenotoxic, antiobesity and antioxidante effects of Ilex paraguariensis (yerba mate)Andrea da Rocha Kaezer 21 August 2013 (has links)
O extrato aquoso de erva-mate, obtido a partir de folhas secas de Ilex paraguariensis, é uma bebida amplamente consumida na América do Sul. Inicialmente, nosso objetivo foi caracterizar os compostos presentes nas amostras de erva-mate disponíveis no mercado brasileiro (CH: chimarrão; T: chá mate torrado; G: chá mate torrado, comercialmente acondicionado em garrafas ou C: em copos; TS: chá mate torrado solúvel A mutagenicidade, citotoxicidade e antimutagenicidade de todas as amostras também foram avaliadas atavés do Teste de Ames na presença e na ausência de ativação metabólica. Em seguida, analisamos a amostra TS (2,5, 5,0 e 10 mg/mL) quanto a sua atividade antioxidante e antigenotóxica. Além disso, avaliamos também os efeitos da amostra TS sobre a sinalização da leptina e da insulina no hipotálamo e o estresse oxidativo hepático de ratos adultos obesos programados pela superalimentação neonatal (S). Para induzir S, o tamanho da ninhada foi reduzido a três filhotes por lactante e as ninhadas com número padrão de filhotes (dez/lactante) foram utilizadas como controle. Aos 150 dias de vida, as proles S foram subdivididas em: TS - tratados com extrato aquoso de erva-mate (1g/kg de peso corporal/dia, por gavagem) e S - recebendo água por gavagem durante 30 dias. A prole controle (C) também recebeu água nas mesmas condições do grupo S. Em nossos resultados, verificamos a presença de ácido clorogênico, cafeína e teobromina em todas as amostras analisadas. O conteúdo de compostos fenólicos nas infusões estudadas foram CH: 5,140,23; T: 4,330,01; G: 0,930,25; C: 0,800,3 e TS: 8,350,5 mg/ml. Não observamos efeito mutagênico ou citotóxico nas amostras analisadas. Um efeito antimutagênico significativo foi observado para a cepa TA97 (pré-, co- e pós-tratamento), na presença de ativação metabólica, em todas as amostras testadas. A amostra TS também apresentou um efeito antimutagênico significativo para a TA102 (pré-, co-e e pós-tratamento), na presença de ativação metabólica. Na análise exclusiva da amostra TS, observamos uma atividade antioxidante quando utilizado o ensaio de DPPH, apresentando IC50 69,3+3,1 μg/ml. Além disso, a amostra TS apresentou um efeito protetor sobre a quebra do DNA plasmidial induzida por radicais superóxido e hidroxila, de maneira dose dependente. No teste do cometa, detectamos um efeito antigenotóxico induzido pelo TS em cultura primária de células epiteliais de esôfago. Em nossos testes in vivo observamos que os animais TS não desenvolveram sobrepeso, obesidade visceral e hiperfagia. A resistência hipotalâmica à leptina não foi significativamente revertida, porém a resistência à insulina foi minimizada pelo tratamento com TS no grupo programado pela S. No fígado, TS normalizou as atividades das enzimas antioxidantes (SOD, GPx e CAT) e diminuiu os marcadores de estresse oxidativo, MDA e 4-HNE. O tratamento com TS também reduziu o conteúdo de glicogênio e triglicerídios hepáticos. Nossos resultados sugerem que a erva-mate foi capaz de proteger o DNA contra danos oxidativos, aumentou as defesas antioxidantes, melhorou a função hepática em ratos superalimentados na lactação, talvez através da modulação da sinalização hipotalâmica da insulina podendo ser, portanto, uma importante ferramenta para prevenção e tratamento de doenças relacionadas ao estresse oxidativo. / Yerba mate extract, made from dried leaves of Ilex paraguariensis, is a tea-like beverage consumed in South America. Here, we aim, firstly, to characterize the compounds present in yerba mate beverages available in the Brazilian market (chimarrao CH; mate tea T; mate tea commercially packed in bottles B and cups ready-to-drink C; and roasted yerba mate soluble tea TS). We also evaluated its mutagenic, cytotoxic and antimutagenic properties through Ames test in the presence and absence of metabolic activation. Then, we analyzed exclusively TS sample (2.5, 5.0 and 10 mg/mL) as its antioxidant activity, on plasmid DNA cleavages and upon epithelial esophagus primary culture of Wistar rats treated with a genotoxic agent. Futhermore, we evaluated the effects of mate tea (TS) upon the hypothalamic changes of leptin and insulin signaling and hepatic oxidative stress in postnatal early overfeeding (S) rats. To induce S, litter size was reduced to three pups per dam and normal litters (ten pups/dam) were used as control. In postnatal day (PN) 150, S offspring were subdivided into: S and TS groups treated, respectively, with water or mate tea (1g/kg BW/day, by gavage) during 30 days. C offspring received water. Our results showed the presence of chlorogenic acid, caffeine and theobromine in all analyzed samples. The contents of phenolic compounds in the studied infusions were CH:5,140,23; T:4,330,01; B:0,930,25; C:0,800,3 and TS:8,350,5 mg/mL. No mutagenic or cytotoxic effect was observed for all analyzed samples. A significant antimutagenic effect was observed for S.typhimurium TA97 (CoT, PreT and PosT), in the presence of metabolic activation, for all tested samples. TS sample also exhibited a significant antimutagenic effect for S.typhimurium TA102 (CoT, PreT and PosT) in the presence of metabolic activation. We did not observed an antimutagenic effect using TA98, TA100 and TA102 for CH, T, C and B samples; and no effect for TA98 and TA100 for TS sample. The exclusive analysis of TS sample, demonstrated an IC50 value of 69,3+3,1μg/ml, in DPPH radical scavenging assay. We also observed a protective effect of TS on plasmid DNA against cleavages induced by superoxide and hydroxyl radicals, in a dose dependent manner. In the comet assay, we detected an antigenotoxic effect of TS in esophagus primary cultures. Our in vivo tests showed that postnatal S rats treated with TS presented lower body weight, total body fat, total visceral fat and food intake. The hypothalamic resistance to leptin was not significantly reversed, although insulin resistance was minimized by TS in the group programmed by neonatal overfeeding. In liver, mate treatment normalized the activities of the antioxidant enzyme activities (SOD, GPx and CAT) and decreased the oxidative stress markers, MDA and 4-HNE. The treatment with TS also reduced the liver glycogen and triglycerides contents. Taken together, our results suggest that yerba mate have a potential to protect DNA against oxidative damage, increased antioxidant defences, improved liver function in adult S rats, maybe through modulation of hypothalamic insulin signaling and may be an important tool to prevent and manage oxidative stress related disorders.
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Stepwise error-prone PCR and DNA shuffling changed the pH activity range and product specificity of the cyclodextrin glucanotransferase from an alkaliphilic Bacillus sp.: Stepwise error-prone PCR and DNA shuffling changed the pH activityrange and product specificity of the cyclodextrin glucanotransferasefrom an alkaliphilic Bacillus sp.Melzer, Susanne, Sonnendecker, Christian, Föllner, Christina, Zimmermann, Wolfgang January 2015 (has links)
Cyclodextrin glucanotransferase (EC 2.4.1.19) from the alkaliphilic Bacillus sp. G-825-6 converts starch mainly to c-cyclodextrin (CD8). A combination of error-prone PCR and DNA shuffling was used to obtain variants of this enzyme with higher product specificity for CD8 and a broad pH activity range. The variant S54 with seven amino acid substitutions showed a 1.2-fold increase in CD8-synthesizing activity and the product ratio of CD7:CD8 was shifted to 1:7 compared to 1:3 of
the wild-type enzyme. Nine amino acid substitutions of the cyclodextrin glucanotransferase were performed to generate the variant S35 active in a pH range 4.0–10.0. Compared to the wild-type enzyme which is inactive below pH 6.0, S35 retained 70% of its CD8-synthesizing activity at pH 4.0.
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Interaktion der FO Statoruntereinheiten a und b der ATP-Synthase aus Escherichia coliKonrad, Stephanie 05 April 2002 (has links)
Interaktion der FO Statoruntereinheiten a und b der ATP-Synthase aus Escherichia coli
Die ATP-Synthase nimmt im Energiestoffwechsel vieler Organismen eine zentrale Stellung ein und ist ubiquitär in strukturell und funktionell homologer Form bei eukaryotischen Zellen in der inneren Mitochondrienmembran, der Thylakoidmembran von Chloroplasten und in der Cytoplasmamembran von Prokaryoten zu finden. Besonders zwischen F-, V- und A-Typ ATPasen bestehen strukturelle Ähnlichkeiten im Aufbaus des Gesamtenzyms aus zwei großen Subkomplexen. Darüber hinaus weisen die F-Typ ATPasen aller Organismen hohe Sequenzhomologien auf, welche sich auch in strukturellen Gemeinsamkeiten widerspiegeln.
Als "Modellenzym" dient die FOF1 ATPase aus dem Enterobakterium Escherichia coli. Es setzt sich aus acht funktionell verschiedenen Untereinheiten zusammen, die unter Hydrolysebedingungen relativ zueinander rotieren. Die Unterteilung der Enzymstruktur in Rotor (g e -c-Oligomer) und Stator (a 3b 3d ab2) erfordert das Vorhandensein einer stabilisierenden Struktur, dem sog. "second stalk". Im Hinblick auf den Mechanismus der rotierenden ATP-Synthase und dem Modell der elastischen Kopplung erscheint die Untereinheit b geeignet, um die durch das g e -c-Oligomer aufgebaute Rotationsspannung zu speichern. Wie die beiden b Untereinheiten mit den anderen FO Untereinheiten a bzw. c interagieren ist weitgehend unbekannt.
In der vorliegenden Dissertation wurden die Untereinheiten a und b auf mögliche Interaktionsstellen mit anderen Enzymuntereinheiten mittels genetisch eingefügte Cysteine und anschließender chemischer Quervernetzung untersucht.
In der hier vorgestellten Arbeit konnte gezeigt werden, dass es mit dem Nulllängen Cross-linker Cu(1,10-Phenanthrolin)2SO4 [CuP] in der Region bP28C-bE39C möglich ist, Quervernetzungen zur Untereinheit a zu erzeugen. Mit den heterobifunktionellen Cross-linkern Benzophenon-4-maleimid [BPM] und N-[4-(p-Azidosalicylamido)butyl]-3´-(2´-pyridydithio)propionamid [APDP] vergrößert sich diese Region. Dabei sind die a-b Interaktionen in einer gewissen Periodizität (bP28C, bL29C, bM30C, bA31C, bK38C und bE39C) zu beobachten, was für eine Beteiligung beider b Untereinheiten spricht.
Neben dem immunologischen Nachweis durch Antikörper, konnte auch über ein N-terminales Polyhistidinmotiv (His12) gezeigt werden, dass eine Interaktion zwischen den Untereinheiten a und b ausbildet wird. Der aN-His12-b Cross-link kann mittels Ni-NTA Affinitätschromatographie aufgereinigt werden.
b-Dimerisierungen konnten für die Reste bS60C, bL65C und die Region bY24C-bA45C nachgewiesen werden. Der relative Abstand der b Untereinheiten zueinander nimmt dabei in ihrem Verlauf vom Cytoplasma in Richtung Membran zu, wie mit den Cross-link Reagenzien CuP, BPM und APDP gezeigt werden konnte.
Ausgehend von der Untereinheit a konnten für die Reste aS27C, aN33C, aA130C, aG173C, aP182C, aN184C, aS202C und aG227C ebenfalls CuP vermittelte Quervernetzungen mit der Untereinheit b nachgewiesen werden. Die Reaktion an der Position aS27C weist auf eine cytoplasmatische Lokalisation des N-Terminus hin, die in einem 6 Transmembran-Sekundärstrukturmodell vorgeschlagen wird.
Mit BPM konnte die Nähe der Aminosäuren aN33C und aP182C zum c-Oligomer gezeigt werden.
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Characterization and manipulation of the biosynthetic pathway of cyanobacterial tricyclic microviridins in E. coliWeiz, Annika R 26 April 2012 (has links)
Microviridine sind ribosomal synthetisierte, cyanobakterielle Depsipeptide. Die genetische Basis der Microviridinproduktion ist ein Gencluster mit den Genen mdnABCDE. Zwei neuartige ATP-grasp-Ligasen, MdnB und MdnC, katalysieren die Bildung von Lacton- und Lactamringen durch die Einführung von zwei -Ester-und einer -Amidbindung. Die Prozessierung wird von einer bislang unbekannten Peptidase durchgeführt. Neben den filamentösen Nostoc und Planktothrix gehört die einzellige, blütenbildende Cyanobakteriengattung Microcystis zu den Microviridinproduzenten. Die inhibitorische Aktivität gegenüber Serinproteasen verleiht Microviridinen ökologische und pharmazeutische Relevanz. Im Rahmen dieser Arbeit wurde eine kleine Microviridin Expressionsplattform konstruiert. Ein neuartiges Microviridin Gencluster aus Microcystis aeruginosa Nies843 wurde heterolog in E. coli exprimiert, bioinformatisch analysiert und mutiert. Das hochkonservierte PFFARFL-Motif im Precursorpeptid MdnA wurde als Erkennungssequenz für die ATP-grasp Ligasen identifiziert. Manipulationen am C-Terminus des leader-Peptids führten zu einer Inhibierung der Aktivität von MdnB. Peptid-Protein-Interaktionen zwischen MdnA und den ATP-grasp Ligasen wurden untersucht. Der ABC-Transporter MdnE stabilisiert höchstwahrscheinlich einen Microviridin Biosynthesekomplex an der inneren Membran, wofür zwei mögliche Modelle vorgeschlagen werden. Punktmutationen in der Microviridin core-Sequenz offenbarten Flexibilität des Microviridin-Biosyntheseapparates für das peptide engineering. Es wurde eine Mutante konstruiert, deren inhibitorische Aktivität gegen Elastase um den Faktor 100 verbessert wurde. Durch die Konstruktion einer Precursoraustauschplattform konnten bisher kryptische Microviridine produziert werden. Diese Methode hat Potential für den Bau von Microviridinbibliotheken. Letztlich wird eine Hypothese zum Bindungsmechanismus von Microviridinen an Proteasen aufgestellt. / Microviridins are ribosomally synthesized cyanobacterial oligopeptides. These peptides comprise an unrivaled multicyclic cage-like structure, carrying two characteristic ester and one amide bond, which are introduced by the two novel ATP-grasp ligases MdnB and MdnC. In addition to the filamentous species Nostoc and Planktothrix, the unicellular, bloom-forming cyanobacterium Microcystis aeruginosa Nies843 is one of the microviridin producer strains. The potent serine protease inhibitory activity contributes to both ecological and pharmacological relevance of microviridins. During this work, a small expression platform carrying the microviridin gene cassette mdnABCDE was established. Microviridins were heterologously expressed in E. coli and analyzed using bioinformatics and mutational analysis. The strictly conserved PFFARFL motif in the precursor peptide MdnA was identified and characterized as a binding sequence for the ATP-grasp ligases. Protein interactions of MdnA with B and C were studied. The ABC transporter MdnE was unveiled to be crucial for cyclization and processing of microviridins, probably stabilizing a putative microviridin maturation complex at the inner membrane. Two initial models for the peptide recognition and processing have been proposed. Point mutations in the microviridin core sequence showed some flexibility of the microviridin biosynthetic pathway to be used for peptide engineering. The exchange of a phenylalanine against a leucine in position 5 of the core region resulted in more than a 100-fold increased inhibitory activity against the attractive drug target elastase. The possibility to express cryptic microviridin precursor peptides in a precursor exchange platform showed the potential to create peptide libraries. Finally, a hypothesis about the binding mechanism of microviridins is presented.
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Strukturelle und funktionelle Analysen von phytatspaltenden Enzymen aus EnterobacteriaceaeHerter, Thomas 07 September 2009 (has links)
In dieser Arbeit wurde die Funktionsweise der sauren Histidin-Phosphatasen (HAPs) an zwei Vertretern, der PhyK (Phytase) aus Klebsiella sp. ASR1 und der AgpE (Glukose-1-Phosphatase) aus Enterobacter cloacae, untersucht. Neben den biochemischen Charakterisierungen der beiden Enzyme und deren Substitutionsmutanten konnten die Proteinstrukturen aufgeklärt werden. Die Kokristallisationen mit Phytat bzw. myo-Inositolhexasulfat ermöglichten die Modellierungen der Substratbindungen in den aktiven Zentren. Es konnten für die Glukose-1-Phosphatase AgpE zum ersten Mal zwei Konformationszustände, eine offene und eine geschlossene Form, ähnlich der E. coli Phytase (AppA) gezeigt werden. Ungeachtet deutlicher funktioneller Unterschiede wiesen die AgpE und AppA starke strukturelle Ähnlichkeiten auf. Deshalb wurden gezielte Aminosäuren-Substitutionen im aktiven Zentrum der AgpE durchgeführt, um deren Eigenschaften zu modifizieren. Bereits der Austausch von nur zwei Aminosäuren führte zu einem deutlich veränderten Substratspektrum der AgpE und bewirkte einen weiteren, hier zum ersten Mal gezeigten, Phytatabbau durch eine Glukose-1-Phosphatase. Die PhyK aus Klebsiella sp. ASR1 wurde ebenfalls verschiedenen Substitutionsmutagenesen unterzogen. Hierbei wurden Phytasevarianten erzeugt, die bis zu 20 % höhere spezifische Aktivitäten und damit einen effizienteren Phytatabbau aufwiesen sowie eine deutlich verringerte Substrathemmung zeigten. Aus den “High Performance Ion Chromatography” Analysen (HPIC) des Phytatabbaus der nativen Klebsiella-Phytase und der Mutanten konnten Rückschlüsse auf die Bedeutung einzelner Aminosäuren für die Substratbindung und daher auch auf den Hydrolysemechanismus gezogen werden. Ausserdem konnte auch gezeigt werden, dass der kombinierte Einsatz der effizienteren Phytasemutante mit der nativen AppA aus E. coli eine deutlich schnellere, vollständige Phytathydrolyse bewirkte und somit einen interessanten Aspekt für die Anwendung in der Tierernährung darstellt. / This work presents the analysis of the enzymatic function of histidine acid phosphatases (HAPs) exemplary studied on two enzymes: the phytase of Klebsiella sp. ASR1 (PhyK) and the glucose-1-phosphatse (AgpE) of Enterobacter cloacae. The AgpE belongs to the HAPs and shows lower catalytic activity for phytate. Besides biochemical analysis the structure of these two enzymes were solved. Binding of phytate and the inhibitor myo-inositolhexa sulfate at the active site of these enzymes were fitted according to the date obtained by co-crystallisations experiments. For the first time two district conformational states could be observed for a glucose-1-phosphatase (AgpE). The open and closed conformations as well as the structures were very similar to the well characterized AppA phytase of E. coli however bothe enzymes showed differences in catalytic efficiency. For this reason substitutions of amino acid within the active site were performed to change substrate spectra and specific activities. The substitutions of only two amino acids strongly changed the substrate spectrum and affected the further phytate hydrolysis by the AgpE. Extensive amino acid substitutions were performed for the phytase of Klebsiella sp. ASR1 as well. In this case phytase mutants with 20% higher specific phytase activities were generated. Besides that, the observed strong substrate-induced inhibitory effect on the phytase activity was lower in these mutants. The biochemical characterizations and high performance ion chromatography analysis (HIPC) of these phytase mutants allowed drawing conclusions of the importance of particular amino acid residues for substrate binding and substrate hydrolysis. Furthermore the combination of Klebsiella phytase mutant and AppA resulted in a more efficient phytate hydrolysis. This aspect offers an interesting possibility for usage of the Klebsiella phytase in livestock breading and animal feeding.
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Die Agonistspezifität des G-Protein-gekoppelten Rezeptors GPR34Ritscher, Lars 10 October 2012 (has links)
In der vorliegenden Arbeit wurden die molekularen Grundlagen für die Agonistspezifität des G-Protein-gekoppelten Rezeptors GPR34 untersucht. Mittels verschiedener funktioneller Versuche konnte an ausgewählten Orthologen des Rezeptors gezeigt werden, dass, im Gegensatz zu publizierten Daten, Lysophosphatidylserin (Lyso-PS) nicht der natürliche Agonist des GPR34 ist. Lediglich an einigen cyprinoiden Subtypen des GPR34 hat Lyso-PS surrogat-agonistische Effekte. Anhand eines detaillierten evolutionären Vergleichs von Orthologen konnten Bereiche des Rezeptors ermittelt werden, welche an der Ligandenbindung, und damit an der Agonistspezifität des GPR34 beteiligt sind. Durch Übertragung dieser Bereiche vom Karpfen-GPR34-Subtyp 2a auf den humanen GPR34 konnte dieser zu einem Lyso-PS-sensitiven Rezeptor modelliert werden.
Weiterhin wurde Aminoethyl-Carbamoyl-ATP (EDA-ATP) als inverser Agonist an cyprinoiden Orthologen des GPR34 identifiziert. Die Erweiterung des möglichen Ligandenspektrums von Lipiden zu Nukleotidderivaten gibt Hinweise auf die
Promiskuität der Bindungsstelle des GPR34.
Die Ergebnisse zeigen, dass Lyso-PS nur eine zufällige Aktivität an einigen Orthologen des GPR34 hat. Mit Identifizierung eines Nichtlipides als invers-agonistischen Liganden ist die Suche nach dem natürlichen Liganden des GPR34 noch nicht abgeschlossen und sollte auf weitere chemische Entitäten ausgeweitet werden. / Lyso-PS (lyso-phosphatidylserine) has been shown to activate the G(i/o)-protein-coupled receptor GPR34. Since in vitro and in vivo studies provided controversial results in assigning lyso-PS as the endogenous agonist for GPR34, we investigated the evolutionary conservation of agonist specificity in more detail. Except for some fish GPR34 subtypes, lyso-PS has no or very weak agonistic activity at most vertebrate GPR34 orthologues investigated. Using chimaeras we identified single positions in the second extracellular loop and the transmembrane helix 5 of carp subtype 2a that, if transferred to the human orthologue, enabled lyso-PS to activate the human GPR34. Significant improvement of agonist efficacy by changing only a few positions strongly argues against the hypothesis that nature optimized GPR34 as the receptor for lyso-PS. Phylogenetic analysis revealed several positions in some fish GPR34 orthologues which are under positive selection. These structural changes may indicate functional specification of these orthologues which can explain the species- and subtype-specific pharmacology of lyso-PS. Furthermore, we identified aminoethyl-carbamoyl ATP as an antagonist of carp GPR34, indicating ligand promiscuity with non-lipid compounds. The results of the present study suggest that lyso-PS has only a random agonistic activity at some GPR34 orthologues and the search for the endogenous agonist should consider additional chemical entities.
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I. Etablierung eines induzierbaren Suizidsystems zur Identifizierung von Mutanten der salizylsäureabhängigen Signaltransduktion II. Expression von tierischen Signaltransduktionskomponenten in Tabak zur Herstellung eines induzierbaren Expressionssystems / I. Construction of an inducible suicide system to identify mutants of the salicylic acid dependent signal transduction chain II. Expression of animal signal transduction components in tobacco to produce an inducible expression systemBrenner, Wolfram 20 June 2002 (has links)
No description available.
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Gezielte Modifikation sowie Analyse der Bindungseigenschaften des Histidin Bindeproteins aus Escherichia coli und des GCN4 Leucinzippers aus Saccharomyces cerevisiae / Modification and analysis of the binding properties of the histidine-binding protein from Escherichia coli and the GCN4-Leucine zipper from Saccharomyces cerevisiaeWittmann, Julia 31 October 2002 (has links)
No description available.
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Genotoxicidade mercurial: contribuição para análise de populações amazônicasMACEDO, Gisele Lima 05 June 2008 (has links)
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Previous issue date: 2008-06-05 / CAPES - Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / O mercúrio é uma importante fonte de poluição ambiental em diversas partes do mundo e especialmente na Amazônia. Atualmente, existem evidências de que a exposição crônica a concentrações relativamente baixas de mercúrio poderia estar iniciando processos genotóxicos (dano ao DNA) em humanos. Porém, foram realizados até agora poucos estudos epidemiológicos com populações amazônicas expostas que não incluíram uma comparação com uma população controle. O objetivo do presente estudo foi identificar a técnica mais adequada para analisar gentoxicidade mercurial em populações amazônicas e estabelecer os valores normais de genotoxicidade em uma população ribeirinha amazônica. Para a realização dos testes in vitro foram aplicadas e comparadas duas técnicas tradicionais de detecção de genotoxicidade (micronúcleos e aberrações cromossômicas). Culturas primárias de linfócitos sangüíneos de voluntários de Belém foram expostas a concentrações relativamente baixas de metilmercúrio (1-500μg/l ou 0,004-2 μM). O índice mitótico (proporção de células em metáfase) originado com a técnica de detecção de aberrações cromossômicas revelou-se como o parâmetro mais sensível à genotoxicidade mercurial. Após a identificação da técnica e o parâmetro mais sensível à genotoxicidade mercurial, essa técnica foi aplicada para estudar uma população ribeirinha amazônica que funcionasse como controle para os estudos de genotoxicidade mercurial que estão sendo feitos. Foi selecionada a população de Panacauera, e a média do índice mitótico encontrado nos indivíduos dessa população foi de 0.077 ± 0.045. Os valores de índice mitótico detectados apresentaram uma variabilidade que não esteve relacionada com a idade ou o sexo. Quando esses valores foram comparados com os valores de Brasília Legal (comunidade exposta ao metilmercúrio) registrados na literatura, foi verificado que para alguns grupos o índice mitótico de Brasília Legal foi inferior ao de Panacauera, o que indicaria uma inibição da progressão do ciclo celular e/ou uma perda da capacidade proliferativa causada pela intoxicação mercurial. Estes resultados apóiam a idéia de que o índice mitótico poderia servir como parâmetro essencial para o diagnóstico precoce do dano causado pela exposição mercurial e contribuem para o escasso conhecimento epidemiológico sobre as conseqüências que está tendo a exposição crônica de mercúrio nas populações da Amazônia. / Mercury is an important environmental pollutant for the world and, specially, for the Amazon. Presently, there are some evidences about chronic exposure to relatively low concentrations of mercury initiating genotoxic processes (DNA damage) in humans. However, to date, few epidemiological studies were carried out with Amazonian populations exposed to mercury, but no study included a population as a control to compare. The aim of this study was to identify the technique more adequate for analyzing mercury genotoxicity in Amazonian populations and to establish control values of genotoxicity in an Amazonian riverside population. To carry out in vitro tests, two traditional methods to detect genotoxicity (micronuclei and chromosomal aberrations) were applied and compared. Primary cultures of blood lymphocytes of volunteers from Belém, were exposed to relatively low concentrations of methylmercury (1-500μg/l or 0,004-2 μM). Mitotic index (proportion of cells in metaphase) originated with the method of detection of chromosomal aberrations was the parameter more sensitive to mercury genotoxicity. After identification of the method and the parameter more sensitive to mercury genotoxicity, this method was applied to study an Amazonian riverside population as a control for studies about mercury genotoxicity. Panacauera was selected as control population and mitotic index for this population was 0.077 ± 0.045. Detected values of mitotic index showed variability, not related to age or sex. When these values were compared to the values of Brasilia Legal (community exposed to methylmercury) registered in literature, mitotic index of Brasilia Legal for some groups was below mitotic index of Panacauera, pointing to an inhibition of the cell-cycle progression and/or loss of proliferative capacity due to mercury intoxication. These results support the idea that mitotic index may serve as an essential parameter for the early diagnosis of the damage provoked by mercury exposure, and they contribute to the epidemiological knowledge about the consequences of the chronic exposure with mercury in Amazonian populations.
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