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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
1401

An integrated approach to the study of biosignatures in mineralizing biofilms and microbial mats / Ein umfassender Ansatz zur Untersuchung von Lebensspuren in mineralisierenden Biofilmen und mikrobiellen Matten

Heim, Christine Nora 09 July 2010 (has links)
No description available.
1402

Impact of customary fuoride rinsing solutions on the pellicle’s protective properties and bioadhesion in situ

Kensche, Anna, Kirsch, Jasmin, Mintert, Sophia, Enders, Franziska, Pötschke, Sandra, Basche, Sabine, König, Belinda, Hannig, Christian, Hannig, Matthias 05 June 2018 (has links) (PDF)
This study investigated the impact of customary fluoride based mouthrinses on the ultrastructure and the functional properties of the in situ pellicle, considering the prevention of erosion (8 volunteers) and initial biofilm formation (12 volunteers). Bovine enamel slabs were carried intraorally. After 1 min of pellicle formation, the subjects rinsed with elmex Kariesschutz (A), Dontodent Med Care (B), meridol (C) or elmex Zahnschmelzschutz Professional (D) for 1 min. In situ pellicle formation was continued up to 30 min/8 h before processing the slabs in vitro. Erosion was simulated by incubating the specimens in HCl (pH 3.0, 2.3, 2.0) for 120 s, measuring the kinetics of calcium/phosphate release photometrically; representative samples were evaluated by TEM and EDX. Bacterial adhesion was visualized fluorescence microscopically (DAPI/BacLight). Native enamel slabs or physiological pellicle samples served as controls. All investigated mouthrinses enhanced the erosion preventive pellicle effect in dependence of the pH-value. A significant decrease of Ca/P release at all pH values was achieved after rinsing with D; TEM/EDX confirmed ultrastructural pellicle modifications. All mouthrinses tendentially reduced bacterial adherence, however not significantly. The mouthrinse containing NaF/AmF/SnCl2 (D) offers an effective oral hygiene supplement to prevent caries and erosion.
1403

Etude numérique sur le modèle de coefficient d’absorption corrélé en multi spectral / Simulation study of the Multi-Spectral Correlated k-distribution model

Hou, Longfeng 11 September 2015 (has links)
Le transfert radiatif dû aux gaz joue un rôle important dans les applications industrielles comme les chambres de combustion, les sciences atmosphériques, etc. Plusieurs modèles ont été proposées pour estimer les propriétés radiatives des gaz. Le plus précis est l'approche dite Raie Par Raie (RPR). Cependant, cette méthode implique un coût de calcul excessif qui la rend inappropriée pour la plupart des applications. Néanmoins, elle reste la méthode de référence que nous utiliserons pour l'évaluation d’autres modèles approchés. Le modèle de coefficient d’absorption corrélé (Ck) est généralement suffisant pour de nombreuses applications. Cette méthode est réputée précise lorsque petits gradients de température sont rencontrés au sein du gaz. Toutefois, si le milieu gazeux est soumis à d'importants gradients de température, la méthode Ck peut conduire à des erreurs qui peuvent atteindre 50% en termes de flux radiatifs par rapport à des simulations de RPR. Le but de cette thèse est de proposer une version améliorée de la méthode Ck, appelée l'approche de coefficient d’absorption corrélé en multi spectral (MSCk). La principale différence entre les modèles Ck et MSCk est que, dans l'approche Ck les intervalles spectraux sur lesquels les propriétés radiatives des gaz sont moyennées sont choisis contiguës alors que, dans l’approche MSCk, ces intervalles sont construits afin d'assurer que le coefficient d'absorption soit corrélé sur ces intervalles. Par conséquent, l'hypothèse de corrélation dans l’approche MSCk est mieux adaptée que dans l’approche Ck. La construction de ces intervalles spectraux (en utilisant la méthode de classification automatique de données fonctionnelles) est détaillée. Cette approche est évaluée par rapport à la référence RPR dans plusieurs cas test. Ces cas traitent de mélanges de gaz (H2O-N2 et H2O-CO2-N2) dans l’intervalle de température [300-3000K]. Les résultats montrent que la méthode MSCk permet d'obtenir de meilleures précisions que les méthodes Ck tout en restant acceptable en termes de coût de calcul. / Radiative heat transfer of gas plays an important role in industrial applications such as in combustion chambers, atmospheric sciences, etc. Several models [11] have been proposed to estimate the radiative properties of gases. The most accurate one is the Line-By-Line (LBL) approach. However, this technique involves excessive computation cost which makes it inappropriate for most applications. Nevertheless, it remains the reference approach for the assessment of other approximate models. The Correlated k-distribution method (Ck) [11] was shown to be a relevant choice for many applications. This method performs usually well, when only small temperature gradients are involved [21]. However, if the gaseous medium is subject to large temperature gradients, it may lead to errors that can reach 50% in terms of radiative heat fluxes when compared to LBL simulations [21]. The aim of the present paper is to propose an enhanced version of the Ck method, called the Multi-Spectral Correlated k-distribution approach (MSCk). The main difference between Ck and MSCk models is that in the Ck approach spectral intervals over which the radiative properties of the gas are averaged are chosen contiguous whereas, in the MSCk technique, those intervals are built in order to ensure that the absorption coefficient are scaled over them [27]. Accordingly, the usual assumption of correlated spectrum used in k-distribution approaches for the treatment of non uniformities is more acceptable in the MSCk case than in the Ck one. The building of those spectral intervals (using Functional Data Clustering, [52]) is detailed and the approach is assessed against LBL reference data in several test cases. These cases involve H2O-N2 and H2O-CO2-N2 mixtures in the [300-3000K] temperature range. Results show that the MSCk method enables to achieve better accuracies than Ck methods while remaining acceptable in terms of computational cost.
1404

Developmental Strategies to Address Prosthetic Infection and Magneto-Responsive Biomaterials for Orthopaedic Applications

Sunil Kumar, B January 2015 (has links) (PDF)
The issue of prosthetic infection leading to implant failure due to the formation of bacterial biofilms on biomaterial surfaces has been widely recognized as a major issue, often leading to revision surgery. The growing number of patients requiring synthetic biomaterials as implants is on the rise and so is the risk of infection arising from pre/peri-/post-operative surgical procedures. Traditional antibiotic treatment has led to the emergence of bacterial drug resistance. Therefore, the development of novel bactericidal methods to combat drug resistant microbial pathogens is the need of the hour. The first part of the thesis is an attempt to address prosthetic infection by the development of novel ultrasmall gold nanoparticles (AuNPs) which are cytocompatible and present a therapeutic dosage window for eliciting antimicrobial property. Towards this end, ultrasmall AuNPs with 0.8 nm and 1.4 nm gold core sizes, stabilized by monosulphonated triphenylphosphine ligand shells were synthesized. Such intricately designed AuNPs with ultrasmall gold cores and phosphine-based ligand chemistry were demonstrated to be highly potent bactericidal agents against staphylococci, the most common human pathogen causing biomaterial associated infection. The antibacterial efficacy of these AuNPs was significant even in mature staphylococcal biofilms. In another study, the application of high strength pulse magnetic fields (1-4 Tesla) was examined for bacterial growth inactivation in vitro. A magnetic field strength dependent decrease in bacterial viability with a concomitant increase in the production of reactive oxygen species (ROS) and longer doubling times were recorded. The mechanism of action was explained through an analytical model which involves ion-transport interference of essential ions like Ca2+ and Mg2+ and disruption of FeS clusters leading to inactivation of bacterial redox enzymes. On the contrary, such high magnetic fields did not pose any detrimental effects to eukaryotic cells under similar exposure. Additionally, the potency of low intensity direct current electric field (DC EF: 1V/cm) against biofilm formation by methicillin resistant Staphylococcus aureus (MRSA) was explored on antimicrobial surfaces of hydroxyapatite and Zinc oxide (HA-xZnO; x = 0, 5, 7.5 and 10 wt%). An EF exposure time dependent decline in the viability and stability of MRSA biofilms were noted. Further, EF treatment resulted in bacterial membrane depolarization and reduced biofilm formation on HA-ZnO composites, independent of the substrate composition. In summary, the above three studies were cases of the developmental methods to address prothetic infection. The second part of the thesis is focused on the development of magneto-responsive biomaterials as implants for orthopaedic applications. Under this category, the sintering/ hot pressing of hydroxyapatite-magnetite (HA-xFe3O4; x = 0, 5, 10, 20 and 40 wt%) powders in oxidizing and inert atmospheres was carried out and the resulting phases and microstructure were characterized. A detailed analysis of the phase assemblage by Rietveld refinement of the X-ray diffraction (XRD) data and Mössbauer spectroscopy revealed the major retention of Fe3O4 along with wustite (FeO) formation under reducing conditions while hematite (α-Fe2O3) was the oxidized product of conventional sintering in ambient atmosphere. A good correlation between the unit cell volume increases in HA observed from Rietveld refinements and Fe incorporation into the apatite lattice from Mössbauer spectral parameters was evident. Further, the Mössbauer data analysis indicated a preferential occupancy of Fe at the Ca(1) site under oxidizing conditions and Ca(2) site in inert atmosphere. The above phase analyses were further confirmed by X-ray photoelectron spectroscopy (XPS), Infrared spectroscopy (FT-IR) and CHN analysis. The microstructure of the hot-pressed samples observed under transmission electron microscope (TEM) divulged similar phases as deduced from XRD as well as the formation of translational Moire fringe patterns due to inference of overlapping crystal planes of HA and Fe3O4 in the HA-40 wt% composite. Such translational Moire fringes suggest a preferred arrangement and orientation of the crystallites resulting from hot-pressing, which correlated well with the room temperature magnetic measurements made with the help of a vibrating sample magnetometer (VSM). The compositional similarity of Fe doping in HA to that of the tooth enamel and bone presents these HA-Fe3O4 composites as potent dental/ orthopaedic implant materials. In the conclusive study, the hot-pressed HA-xFe3O4 composites were tested for their efficacy in supporting the osteogenesis of human mesenchymal stem cells (hMSCs) assisted by intermittent static magnetic field exposure. The magneto-responsive substrates were applied as platforms for the culture of hMSCs and the effect of static magnetic field (SMF) exposure on the viability, proliferation and differentiation of hMSCs were elucidated. With a mild compromise in viability, SMF triggered the osteogenic differentiation of hMSCs mediated by proliferative arrest in the G0/G1 phase and elevated intracellular calcium levels. The early bone marker genes - Runx2, Col IA and ALP were significantly up regulated upon SMF exposure on pure HA and HA-Fe3O4 composites. Further, the late osteogenic markers – OCN and OPN were detected exclusively in the HA-xFe3O4 (x = 10 and 40 wt%) composites. Matrix mineralization was enhanced and CaP nodules were detected on similar SMF treated HA-Fe3O4 composites. A substrate magnetization and time dependent modulation of gene expression was recorded which corroborated well with the temporal trending of osteogenic genes during bone development. In conclusion, substrate magnetization can be applied as a tool to modulate the behavior of stem cells and direct them towards osteogenic lineage. Such a pertinent combination of substrate magnetization and external magnetic field stimulation can be applied synergistically for stem cell based bone tissue engineering applications.
1405

Impact of customary fuoride rinsing solutions on the pellicle’s protective properties and bioadhesion in situ

Kensche, Anna, Kirsch, Jasmin, Mintert, Sophia, Enders, Franziska, Pötschke, Sandra, Basche, Sabine, König, Belinda, Hannig, Christian, Hannig, Matthias 05 June 2018 (has links)
This study investigated the impact of customary fluoride based mouthrinses on the ultrastructure and the functional properties of the in situ pellicle, considering the prevention of erosion (8 volunteers) and initial biofilm formation (12 volunteers). Bovine enamel slabs were carried intraorally. After 1 min of pellicle formation, the subjects rinsed with elmex Kariesschutz (A), Dontodent Med Care (B), meridol (C) or elmex Zahnschmelzschutz Professional (D) for 1 min. In situ pellicle formation was continued up to 30 min/8 h before processing the slabs in vitro. Erosion was simulated by incubating the specimens in HCl (pH 3.0, 2.3, 2.0) for 120 s, measuring the kinetics of calcium/phosphate release photometrically; representative samples were evaluated by TEM and EDX. Bacterial adhesion was visualized fluorescence microscopically (DAPI/BacLight). Native enamel slabs or physiological pellicle samples served as controls. All investigated mouthrinses enhanced the erosion preventive pellicle effect in dependence of the pH-value. A significant decrease of Ca/P release at all pH values was achieved after rinsing with D; TEM/EDX confirmed ultrastructural pellicle modifications. All mouthrinses tendentially reduced bacterial adherence, however not significantly. The mouthrinse containing NaF/AmF/SnCl2 (D) offers an effective oral hygiene supplement to prevent caries and erosion.
1406

Tvorba biofilmu u probiotických kultur a možnosti jeho využití ve farmacii / Biofilm formation in probiotic cultures and its application in pharmacy

Ryšávka, Petr January 2021 (has links)
The work was comprehensively focused on the development of adhesive forms of probiotics in the form of a biofilm on combined carriers with a prebiotic component. The second part dealed with the influence of food on the multiplication and survival of selected types of probiotic bacteria. Subsequently, the effect of individualized probiotic supplements on changes in the human intestinal microbiome was monitored. Suitable adherent probiotic strains for biofilm formation were selected and tested. Methods have been introduced and different variants of carriers for culturing and binding bacteria have been tested. In vitro experiments verified the stability of biofilm stucture and its resistance to low pH, bile and antibiotics in comparison with the planktonic cell form. The antimicrobial effect of probiotic strains in the form of a biofilm was studied. The cultivation of the multispecies biofilm on the combined carrier was optimized and the stability of the biofilm and the final viability of probiotic bacteria were confirmed. Furthermore, the influence of various foods and beverages on the viability of probiotic bacteria was evaluated with emphasis on the simulation of passage through the gastrointestinal tract. Both models, solutions with standardised concentrations of alcohol, sugar, salts, proteins or different pH and different types of real foods and beverages were tested. The effect of food and beverages was tested on monocultures of Lactobacillus acidophilus, Bifidobacterium breve and on probiotic capsules containing a mixed culture of probiotic microorganisms. The survival of probiotics in various food matrices in the simulated gastrointestinal tract was quantitatively different. We managed to define foods suitable for supporting the multiplication of probiotic bacteria. A separate part of the work was focused on the targeted modulation of the intestinal microbiome by individualized probiotics that were prepared on the basis of molecular biological analyzes of the intestinal microbiome aimed at detecting the percentage of lactobacilli, bifidobacteria and phylum Firmicutes and Bacteroidetes. Personalized probiotic supplementation confirmed the positive effect of this approach on microbiome changes, especially on the increase of the content of lactobacilli, bifidobacteria and the overall diversity of the microbiome.
1407

[pt] ESTUDO DA CORROSÃO INDUZIDA POR MICROOGANISMOS EM AÇOS GRAU API / [en] STUDY OF MICROBIOLOGICALLY INFLUENCED CORROSION IN API STEELS PIPES

03 November 2021 (has links)
[pt] Em tubulações industriais e dutos, a presença de biofilme pode ocasionar danos localizados (pites e alvéolos), levando a vazamentos e redução da área de fluxo devido à formação de biomassa. Aços grau API são os materiais usualmente utilizados nas tubulações industriais e dutos que podem ser afetados pelo fenômeno de corrosão induzida por microrganismos (CIM). A CIM ocorre devido a interações entre os grupos microbianos presentes no biofilme formado, a liberação de produtos metabolitos, e a relação destes com a superfície do metal. Foi realizado um estudo do comportamento de aços graus API B, X-65 e X-80, em presença de água do mar sintética com adição de cultura mista de bactérias (BRS; BPF; BPA) em sistema dinâmico, e comparados com meio sem adição de microrganismos. Foram realizadas analises químicas do fluido de processo e a quantificação microbiana das bactérias planctônicas e sésseis que demonstraram a relação entre os grupos bacterianos dentro dos biofilmes formados e sua cinética ao longo do tempo. Microscopia eletrônica de varredura e espectroscopia de dispersão de energia foi aplicada para visualização do biofilme e seus produtos de corrosão. A extensão, severidade e morfologia da corrosão dos aços API foi avaliada por microscopia ótica, sendo possível relacionar o efeito no processo corrosivo com o consorcio de microrganismos presente, tendo sido ainda avaliado a influência da microestrutura dos diferentes aços nos sítios preferenciais de nucleação de pites. / [en] In industrial and transportation pipelines, the presence of biofilms may cause localized damage (pitting), leading to leakages and reduction of flow area due to the formation of biomass. API grade steels pipes are the materials commonly used in industrial and transportation pipelines and may be affected by this type of phenomenon. The microbiologically influenced corrosion (MIC) occurs due to interactions between the microbial groups present in the biofilm, the release of metabolites and their relation with the metal surface. The present work study of the behavior of API pipe steels degrees B, X-65 and X-80 in synthetic sea water containing mixed culture of bacteria (SRB, APB, IOB) carried out on a dynamic system and compared to medium without added microorganisms. Chemical analysis of the process fluid and quantification of microbial planktonic and sessile bacteria performed showed the relation between bacterial groups within biofilms and their kinetics over time. Scanning electron microscopy and energy dispersive spectroscopy was applied for visualization of biofilms and their corrosion products. The extent, severity and morphology of corrosion of API pipe steels were assessed by optical microscopy, being possible to relate the effect of the consortium of microorganisms on the corrosion process. Also the influence of microstructure of different steels in preferential nucleation sites for pitting were evaluated.
1408

Development of a Two-Stage Computational Modeling Method for Drinking Water Microbial Ecology Effects on Legionella pneumophila Growth

Hibler, David A. January 2020 (has links)
No description available.
1409

Analyse topographique, mécanique et électrochimique à l'échelle sub-micrométrique de processus pilotés par les bactéries

DHAHRI, Samia 26 September 2013 (has links) (PDF)
La présence de matière biologique (biofilms) dans les sites de stockage géologique profond, d'éléments toxiques ou encore de l'eau potable des aquifères est maintenant clairement démontrée. Cette biomasse est à l'origine de processus physiques et chimiques qui modifient considérablement la durabilité et la pérennité des sites concernés. Ces processus, principalement de type oxydo-réductif, sont encore mal compris. Ceci est principalement dû aux méthodes d'investigation, principalement macroscopiques, loin de l'échelle micrométrique caractéristique des bactéries. Seules des études, basées sur des méthodes d'investigation locale, peuvent apporter les informations requises. Ainsi, nous avons développé un dispositif expérimental basé sur l'utilisation combinée de la microscopie optique (en transmission), la microscopie à force atomique (AFM) et la microscopie AFM en mode électrique et électrochimique (EC_AFM) afin d'obtenir des informations simultanées sur la topographie de l'échantillon et sur les processus électrochimiques à l'échelle des bactéries. La première étape sensible consistait à utiliser l'AFM sur des échantillons biologiques en milieu liquide: nous présentons ici les résultats de l'imagerie AFM en milieu liquide de plusieurs types de bactéries dans leurs conditions physiologiques naturelles (conditions in vivo). Aucun protocole d'immobilisation, ni chimique ni mécanique, n'a été nécessaire; et pour la première fois, les mouvements de reptation de cyanobactéries Nostoc ont été étudiés par l'AFM. Les études AFM ont permis d'acquérir des données topographiques mais aussi mécaniques : nous avons pu ainsi mesurer le module d'Young, la pression de turgescence de différentes souches bactériennes (Anabaenopsis circularis, Rhodococcus wratislaviensis). Cette étude complète, a révélé que l'imagerie AFM est donc possible sur des espèces vivantes en mouvement. Ces résultats ouvrent une grande fenêtre sur de nouvelles études d'intérêts tels que la formation de biofilms et les propriétés dynamiques de bactéries dans des conditions physiologiques réelles. La deuxième étape délicate était de combiner l'AFM aux mesures optiques et électriques. Nous avons développé un nouveau dispositif expérimental permettant (i) le suivi de l'évolution de la croissance bactérienne par la mesure des propriétés optiques comme la densité optique DO (pour le développement bactérien en volume - milieu planctonique) , ou l'analyse de l'image du substrat par comptage du nombre de bactéries sur la surface de l'échantillon (biofilm), et (ii) les mesures électriques et électrochimiques. L'ensemble de ces résultats sera prochainement appliqué au développement de nouveaux outils de surveillance d'une biodépollution de terrain contaminé par les hydrocarbures, par le suivi in situ et en temps réel de l'activité de bactéries dépolluantes (ECOTECH_BIOPHY ANR).
1410

Identifikation von Genen und Mikroorganismen, die an der dissimilatorischen Fe(III)-Reduktion beteiligt sind / Isolation of Genes and Microorganisms Involved in Dissimilatory Fe(III)-Reduction

Özyurt, Baris 21 January 2009 (has links)
No description available.

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