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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
21

Mécanismes moléculaires de la régulation thyroïdienne par l’iode : recherche des protéines iodées et application de la métabolomique aux études des pathologies de la thyroïde et d’autres organes / Identification of an iodinated protein involved in thyroid regulation by iodide and metabolomics approach in the study of thyroid disruptors and cancers

Jing, Lun 28 June 2018 (has links)
La thyroïde est une glande endocrine importante pour le contrôle du métabolisme, le développement et la croissance des mammifères. Sa fonction est stimulée par la « Thyroid Stimulating Hormone » (TSH) mais inhibée par une forte élévation de l’iode plasmatique. Cette inhibition par l’iode a été décrite il y a plus de 70 ans, mais la compréhension des mécanismes sous-jacents reste partielle et controversée. La mise en place de l’effet inhibiteur de l’iode nécessite la génération de composants intermédiaires iodés dont la nature est inconnue. La première partie de cette thèse a eu pour objectif d’étudier si des protéines iodées pourraient avoir un rôle dans la régulation de la thyroïde par l’iode. En combinant le marquage radioactif, l’électrophorèse bidimensionnelle et la spectrométrie de masse, nous avons mis en évidence dans des cellules en culture une iodation spontanée de la Peroxyrédoxine 6 (PRDX6). Nous avons ensuite identifié les positions d’iodation sur la protéine PRDX6 et évalué leurs effets sur son activité enzymatique. De plus, nous avons montré qu’une diminution de l’expression de la PRDX6 par « Short hairpin RNA » amplifie la diminution de la capacité de captation d’iode induite par un excès d’iode. Sur la base de ces résultats, nous proposons que la PRDX6 exerce un rôle protecteur vis-à-vis d’une exposition aiguë à l’iode. Les résultats obtenus apportent des connaissances originales dans le mécanisme de la régulation thyroïdienne par l’iode et dévoilent un nouveau rôle potentiel de cette peroxydase dans la thyroïde. La deuxième partie de cette thèse a consisté à développer des approches en métabolomique pour les appliquer dans les études sur des dysfonctionnements ou des lésions de la thyroïde. Pour ce faire, nous avons utilisé la chromatographie en phase liquide couplée à la spectrométrie de masse pour mesurer la variation des métabolites dans les cellules ou les tissus. Grâce à l’exposition à des perturbateurs thyroïdiens d’une lignée de cellules thyroïdiennes de rat, nous avons identifié une liste de métabolites iodés comme étant de potentiels marqueurs d’exposition aux perturbateurs thyroïdiens. Par la suite, grâce aux prélèvements congelés de lésions thyroïdiennes dont le diagnostic de nature avait été réalisé en histologie, nous avons construit un modèle de classification supervisée (de type OPLS-DA) basé sur les données métabolomiques pour discriminer les lésions bénignes des malignes. Les variations des métabolites déterminants pour cette classification indiquent une altération au niveau du cycle de Krebs, du métabolisme du glutathion et du métabolisme des bases puriques. En outre, nous avons montré qu’une liste restreinte de métabolites suffit pour établir un modèle de discrimination statistiquement significatif. Ces résultats ouvrent la possibilité d’affiner le diagnostic sur les prélèvements de cytoponction en ciblant uniquement ces métabolites. Ces approches en métabolomique ont également été appliquées à l’étude d’autres types de tumeurs, notamment la classification des sous-types histologiques de carcinomes du rein. / Thyroid function is stimulated by the thyroid-stimulating hormone TSH while inhibited by iodide. The inhibition of thyroid function by an excess of circulating iodide was first reported more than 70 years ago but our understanding of the underlying molecular mechanisms remains unclear. The inhibitory effect of iodide is due to the presence of oxidized iodide in the thyrocytes and the subsequent generation of iodinated intracellular signaling molecules. The first part of this thesis aimed to study the potential role of iodinated proteins in thyroid regulation by iodide. By combining radioactive labeling, two-dimensional gel electrophoresis and mass spectrometry, we showed that the cytosolic enzyme, peroxiredoxin 6 (PRDX6), is spontaneously iodinated in cultured cells in the presence of iodide. We identified the iodinated amino acids in the PRDX6 sequence and studied the effect of the iodination on the protein’s activity. In addition, decreased expression of PRDX6 by short hairpin RNA led to increased cell iodide uptake loss induced by excess iodide. Based on our findings, we propose that PRDX6 is involved in the cellular responses to excess iodide. This novel function for PRDX6 provides new insights into the molecular mechanisms underlying acute regulation by iodide.The second part of this thesis aimed to develop metabolomics approach in the studies of thyroid disruptors and thyroid cancers. To this end, we analyzed metabolite variations in various samples using LC-MS (Liquid chromatography-Mass spectrometry). Firstly, in rat thyroid cell line exposed to different thyroid disruptors, we identified a list of iodinated metabolites, which could serve as potential biomarkers for thyroid disruptor screening. Secondly, we analyzed frozen specimens from thyroid nodules previously diagnosed by histology. Our data allowed us to build a multivariate classification for the discrimination of benign and malignant thyroid nodules. We also detected various metabolic dysregulations in malignant thyroid nodules, including the TCA cycle, the glutathione metabolism and the purine metabolism. Accurate classification was possible by using only a short list of metabolites, allowing for future LC-MS-based thyroid nodule diagnosis on fine-needle aspiration biopsies. Finally, we showed that metabolomics approach could also be helpful for the characterization of other tumors.
22

Systems Biology Analysis of Macrophage Foam Cells: Finding a Novel Function for Peroxiredoxin I

Conway, James Patrick January 2007 (has links)
No description available.
23

Identifizierung infektionsrelevanter Antigene des Schimmelpilzes Aspergillus fumigatus sowie deren rekombinante Herstellung mit dem Ziel der Entwicklung eines Impfstoffes gegen die invasive Aspergillose / Identification of antigens concerning infection of Aspergillus fumigatus as well as recombinant production with the aim of generating vaccine against invasive aspergillosis

Rosenow, Martin 08 July 2010 (has links)
No description available.
24

A PROTEOMIC STUDY OF OXIDATIVE STRESS IN ALCOHOLIC LIVER DISEASE

Newton, Billy W. 16 January 2010 (has links)
Alcoholic steatosis (AS) is the initial pathology associated with early stage alcoholic liver disease and is characterized by the accumulation of fat in the liver. AS is considered clinically benign as it is reversible, as compared with alcoholic steatohepatitis (ASH) which is the next stage of alcoholic liver disease (ALD), and mostly irreversible. Proteomics were used to investigate the molecular basis of AS to determine biomarkers representative of AS. Liver tissue proteins at different stages of steatosis from a rodent model of AS were separated by two dimensional electrophoresis (2DE), followed by MALDI mass spectrometry (MS) identification of significantly expressed proteins. Expression levels of several proteins related to alcohol induced oxidative stress, such as peroxiredoxin 6 (PRDX6) and aldehyde dehydrogenase 2 (ALDH2) were reduced by 2 to 3-fold in ethanol fed rats, and suggested an increase in oxidative stress. Several proteins involved in fatty acid and amino acid metabolism were found at increased expression levels, suggesting higher energy demand upon chronic exposure to ethanol. In order to delineate between the effects of fat accumulation and oxidative stress, an in vitro hepatocyte cell culture model of steatosis was developed. HepG2 cells loaded with oleic acid surprisingly demonstrated lower cytotoxicity upon oxidative challenge (based on lactate dehydrogenase activity) and inflammation (based on TNF-? induced activation of the pro-inflammatory transcription factor NF-?B). We also examined the effect of oleic acid loading in HepG2 cells on protein carbonylation, which is an important irreversible protein modification during oxidative stress that leads to protein dysfunction and disease. Fat-loaded hepatocytes exposed to oxidative stress with tert-butyl hydroperoxide (TBHP) contained 17% less carbonylated proteins than the non-fat loaded control. Mass spectrometric analysis of carbonylated proteins indicated that known classical markers of protein carbonylation (e.g., cytoskeletal proteins, chaperones) are not carbonylated in oleic acid loaded HepG2 cells, and suggests that the protective effect of fat loading is through interference with protein carbonylation. While counterintuitive to the general concept that AS increases oxidative stress, our fat loading results suggests that low levels of fat may activate antioxidant pathways and ameliorate the effect of subsequent oxidative or inflammatory challenge.
25

A PROTEOMIC STUDY OF OXIDATIVE STRESS IN ALCOHOLIC LIVER DISEASE

Newton, Billy W. 16 January 2010 (has links)
Alcoholic steatosis (AS) is the initial pathology associated with early stage alcoholic liver disease and is characterized by the accumulation of fat in the liver. AS is considered clinically benign as it is reversible, as compared with alcoholic steatohepatitis (ASH) which is the next stage of alcoholic liver disease (ALD), and mostly irreversible. Proteomics were used to investigate the molecular basis of AS to determine biomarkers representative of AS. Liver tissue proteins at different stages of steatosis from a rodent model of AS were separated by two dimensional electrophoresis (2DE), followed by MALDI mass spectrometry (MS) identification of significantly expressed proteins. Expression levels of several proteins related to alcohol induced oxidative stress, such as peroxiredoxin 6 (PRDX6) and aldehyde dehydrogenase 2 (ALDH2) were reduced by 2 to 3-fold in ethanol fed rats, and suggested an increase in oxidative stress. Several proteins involved in fatty acid and amino acid metabolism were found at increased expression levels, suggesting higher energy demand upon chronic exposure to ethanol. In order to delineate between the effects of fat accumulation and oxidative stress, an in vitro hepatocyte cell culture model of steatosis was developed. HepG2 cells loaded with oleic acid surprisingly demonstrated lower cytotoxicity upon oxidative challenge (based on lactate dehydrogenase activity) and inflammation (based on TNF-? induced activation of the pro-inflammatory transcription factor NF-?B). We also examined the effect of oleic acid loading in HepG2 cells on protein carbonylation, which is an important irreversible protein modification during oxidative stress that leads to protein dysfunction and disease. Fat-loaded hepatocytes exposed to oxidative stress with tert-butyl hydroperoxide (TBHP) contained 17% less carbonylated proteins than the non-fat loaded control. Mass spectrometric analysis of carbonylated proteins indicated that known classical markers of protein carbonylation (e.g., cytoskeletal proteins, chaperones) are not carbonylated in oleic acid loaded HepG2 cells, and suggests that the protective effect of fat loading is through interference with protein carbonylation. While counterintuitive to the general concept that AS increases oxidative stress, our fat loading results suggests that low levels of fat may activate antioxidant pathways and ameliorate the effect of subsequent oxidative or inflammatory challenge.
26

Secreted Factors from Human Umbilical Cord Blood Cells Protect Oligodendrocytes from Ischemic Insult

Rowe, Derrick 01 January 2011 (has links)
Oligodendrocytes (OL)s are the dominant cell type in the white matter and are integral for synaptic transmission essential for proper neuronal communication between brain areas. Previous studies have shown that intravenous administration of the mononuclear fraction of human umbilical cord blood (HUCB) cells in rat models of stroke reduced white matter injury, gray matter injury and behavioral deficits. Yet the mechanisms used by HUCB cells remain unknown in ischemic injury. These studies will investigate both in vitro and in vivo approaches to elucidate this mechanism in OLs. When mature primary OLs were coincubated with HUCB cells, HUCB cells secreted soluble factors that reduced cell death in OLs exposed to OGD. Microarray analysis revealed that HUCB cell treatment induced OL gene changes. These changes included genes involved in cell proliferation, signaling, anti-oxidant activity, and myelination. To extend these findings, the middle cerebral artery occlusion (MCAO) model was used to assess the expression profile of protein products of gene changes observed in vitro. The in vivo data mirrored in vitro data in that metallothionein 3 (Mt3), peroxiredoxin 4 (Prdx4), myelin oligodendrocyte glycoprotein (Mog), U2AF homology kinase 1(Uhmk1), and insulin induce gene 1(Insig1) were upregulated in OLs of the white matter tract adjacent to the infarct. Furthermore, double immunofluorescence staining determined that OLs expressed these proteins. Other reports have shown that HUCB cells secrete soluble factors related to cellular protection, including interleukin 6 (IL-6), interleukin 8 (IL-8), and interleukin 10 (IL-10). Other factors are known for their proliferative actions, such as vascular endothelial growth factor (VEGF), BDNF, platelet derived growth factor B (PDGF-B), leukemia inhibitory factor (LIF), and granulocyte colony stimulating factor (GCSF) all of which converge on the Akt survival pathway. Given these findings we hypothesize that Akt activation is integral to HUCB cell mediated OL protection. In models of excitotoxicity, the addition of Akt inhibitor IV blocked HUCB cell mediated protection in OL cultures exposed to 24 hrs OGD. In vivo, HUCB cell treatment increased Akt activation, antioxidant protein expression and decreased caspase 3 cleavage in the external capsule in a time dependent manner. The next series of experiments determine whether the soluble factors secreted by HUCB cells could replace HUCB cells as treatment. LIF expression is increased in HUCB cells as compared to peripheral blood and as previously mentioned, LIF is secreted by HUCB cells. Additionally, LIF rescued OLs from spinal cord and experimental autoimmune encephalomyelitis injury. Thus LIF was investigated. LIF protected OL subjected to 24 hr OGD, increased antioxidant Prdx4 gene expression and reduced reactive oxygen species production. Additionally the inclusion of Akt inhibitor IV blocked LIF induced OL protection. Similar results were obtained when GCSF was evaluated. All these findings indicate that HUCB cell mediated OL/white matter protection is due to the soluble factors secreted by the mononuclear population of these cells. These soluble factors including LIF activate cellular machinery leading to enhanced cellular survival. Here we found a specific survival pathway activated by soluble factors released from HUCB cells, leading to Akt activation. Akt activation arrests stroke induced apoptosis and reduced the expansion of the infarct, promoting functional recovery from acute ischemic injury.
27

EXPLORATION OF THE SRX-PRX AXIS AS A SMALL-MOLECULE TARGET

Mishra, Murli 01 January 2016 (has links)
Lung cancer is a leading cause of cancer-related mortality irrespective of gender. The Sulfiredoxin (Srx) and Peroxiredoxin (Prx) are a group of thiol-based antioxidant proteins that plays an essential role in non-small cell lung cancer. Understanding the molecular characteristics of the Srx-Prx interaction may help design the strategies for future development of therapeutic tools. Based on existing literature and preliminary data from our lab, we hypothesized that the Srx plays a critical role in lung carcinogenesis and targeting the Srx-Prx axis or Srx alone may facilitate future development of targeted therapeutics for prevention and treatment of lung cancer. First, we demonstrated the oncogenic role of Srx in urethane-induced lung carcinogenesis in genetically modified FVB mice. The Srx-null mice showed resistance to urethane-induced lung cancer. Second, we demonstrated the Srx and Prx sites important for Srx-Prx interaction. The orientation of this arm is demonstrated to cause some steric hindrance for the Srx-Prx interaction as it substantially reduces the rate of association between Srx and Prx. Finally, we carried out virtual screening to identify molecules that can successfully target Srx-Prx interaction. Multiple in-silico filters were used to minimize the number of chemicals to be tested. We identified ISO1 as an inhibitor of the Srx-Prx interaction. KD value for Srx-ISO1 interaction is calculated to be 42 nM. Together, these data helps to identify an inhibitor (ISO1) of the Srx-Prx interaction that can be further pursued to be developed as a chemotherapeutic tool.
28

Mécanismes cellulaires et moléculaires régissant le métabolisme des semences de céréales : rôle du réseau rédoxines-système antioxydant dans la prédiction de la qualité germinative / Cellular and molecular mechanisms governing the metabolism of the cereals seeds : role of the network antioxidant system/redoxins in the prediction of the germinative quality.

Zahid, Abderrakib 16 July 2010 (has links)
Une meilleure compréhension de la physiologie de la semence des céréales constitue certainement un moyen pour améliorer et développer de nouvelles variétés capables de correspondre aux besoins économiques et écologiques du moment. Les rédoxines constituent des marqueurs intéressants pour appréhender la qualité technologique et germinative du grain de blé en particulier. Le criblage des banques de données a permis d’isoler des isoformes de ces rédoxines. Cette étude a confirmé l’implication des thiorédoxines dans la réduction des protéines de réserve du blé et de maïs. Elle a permis de mettre en évidence un autre rôle de certains isoformes de thiorédoxines h dans la formation de polymères de hauts poids moléculaires. L'inhibition de l’expression de gènes par interférence ADN montre que les thiorédoxines et les glutarédoxines sont impliquées dans la protection contre le stress oxydatif chez le blé. De même, l'application d’un stress biotique simulé par la laminarine a permis de discriminer l'implication de différents marqueurs du stress, et de montrer en particulier que la 1-Cys-Prx peut être considérée comme un indicateur de l'état redox du grain pendant la germination. La mise en place d’une méthode simple et efficace de transformation des céréales via Agrobacterium, constitue un moyen pour comprendre davantage le rôle de ces rédoxines dans la gestion des stress, et les éventuelles conséquences sur la qualité technologique du grain. / A better understanding of the physiology of seed cereal constitutes certainly a means to improve and develop new varieties capable of corresponding to the actual economic and ecological needs. Redoxins are interesting markers to apprehend the technological and germinative quality of wheat seed in particular. The screening of data banks allowed isolating isoforms of these redoxins. This study confirmed the implication of thioredoxins in the reduction of storage proteins in wheat and corn seeds. It allowed to bring to light another role of some thioredoxins h isoforms in the formation of high molecular weights polymers. The inhibition of the expression of genes by DNA interference shows that thioredoxins and glutaredoxins are involved in the protection against oxidative stress in wheat. Also, the application of a biotic stress simulated by laminarin allowed to discriminate the implication of various stress markers, and to highlight in particular that the 1-Cys-Prx can be considered as an indicator of the redox state of the grain during germination and seedling. The implementation of a simple and effective method of transformation of cereal via Agrobacterium constitutes a means to understand more on the role of these redoxins in the management of the stress, and the possible consequences on the technological quality of the seed.
29

Caractérisation et étude de la régulation d’une isoforme cytosolique de peroxyrédoxine chez les solanacées

Maheux, Emilie 08 1900 (has links)
Les peroxyrédoxines (PRXs) forment une famille de peroxydases communes à tous les organismes vivants et ubiquitaires dans la cellule. Leur particularité provient d’un ou deux résidus cystéines accomplissant un cycle d’oxydo-réduction à l’aide d’un donneur d’électron. Ces protéines thiols sensibles au potentiel redox sont impliquées dans le mécanisme de détoxification du H2O2, une molécule oxydante induite lors de situations de stress. Les PRXs pourraient être induites par le stress et régulées par phosphorylation. En effet, des expérimentations in vitro ont démontré que la nucléoside diphosphate kinase 1 (NDPK1) a la capacité de phosphoryler une PRX cytosolique de pomme de terre. Ce mémoire décrit les travaux expérimentaux effectués pour caractériser la fonction de la PRX. Pour cela, le clonage d’une isoforme a été effectué, suivi d’une caractérisation biochimique et d’une étude d’expression de la protéine. Les données de séquençage révèlent qu’il s’agit d’une PRX de type II phylogénétiquement liée aux PRXs cytosoliques. L’ADNc codant pour cette peroxyrédoxine (PRX1) a été cloné chez Solanum chacoense. Une protéine recombinante portant une étiquette (6xHis) en N-terminale a été produite. Des essais enzymatiques ont confirmé la fonction antioxydante de la protéine recombinante et un anticorps polyclonal a été généré chez le lapin puis utilisé en conjonction avec un anticorps anti-NDPK1 pour déterminer les patrons d’expression généraux de ces protéines chez Solanum lycopersicum et Solanum tuberosum lors de situations de stress. Les données démontrent que les deux protéines sont généralement co-exprimées mais pas co-régulées et que la PRX1 est induite en certaines situations de stress. / The peroxiredoxins (PRXs) are a recently discovered family of peroxidases found in all organisms and ubiquitous in the cell. An important particularity of these proteins is the presence of one or two active cysteines that accomplish an oxydo-reduction cycle with an electron donor. The PRXs are sensitive to the redox potential and are implicated in the detoxification of the H2O2, an oxidante molecule induced in stress situations. The PRXs should be induced in stress situations and regulated by phosphorylation. Indeed, in vitro experimentations have shown that the NDPK1 can phosphorylate a cytosolic PRX isoform of the potato. This dissertation describes the experimentation made to acquire a preliminary understanding of the function of the PRX. For this purpose, we cloned a PRX isoform, followed by a biochemical characterization and expression studies of the protein. The sequencing data shown a type II PRX phylogenetically related to the cytosolic isoforms. The cDNA of this peroxiredoxin (PRX1) has been cloned in Solanum chacoense. The recombinant protein produced had a N-terminal (6xHis) tag. Enzymatic assays confirmed the antioxidant activity of the recombinant protein and a polyclonal antibody has been generated from the rabbit. This antibody was used in conjunction with an antibody anti-NDPK1 to determine the general expression patterns of those proteins during stresses in Solanum lycopersicum and Solanum tuberosum. The results obtained showed that the two proteins are generally co-expressed but not co-regulated. Obvious experimental facts displayed an induction of the PRX1 in biotic and abiotic stresses situations.
30

Caracterização funcional e estrutural de peroxidases dependentes de tiól da bactéria fitopatogênica Xylella fastidiosa / Functional and structural characterization of thiol-dependent peroxidases from the phytopathogenic bacterium Xylella fastidiosa

Horta, Bruno Brasil 05 August 2009 (has links)
A bactéria fitopatogênica Xylella fastidiosa é o agente etiológico da Clorose Variegada dos Citros (CVC), que causa perdas anuais estimadas em US$ 100 milhões no Brasil. Durante o processo infeccioso, a geração extracelular de espécies ativas de oxigênio é um dos principais mecanismos de defesa da planta contra o patógeno. Em contrapartida, para se defender do estresse oxidativo imposto pelo hospedeiro, os fitopatógenos possuem mecanismos de defesa que incluem enzimas antioxidantes, como as peroxirredoxinas, alquil hidroperóxido redutase subunidade C (AhpC) e proteína comigratória com bacterioferritina (Bcp). As peroxirredoxinas são proteínas que utilizam suas cisteínas ativas para catalisar a redução de hidroperóxidos. Por análise proteômica, os produtos dos genes ahpc e bcp foram identificados no extrato celular protéico de X. fastidiosa (Smolka e col., 2003). Com o intuito de caracterizar funcional e estruturalmente as proteínas AhpC e Bcp de X. fastidiosa, clonamos e expressamos seus respectivos genes em Escherichia coli e purificamos as proteínas por cromatografia de afinidade a níquel. As proteínas recombinantes apresentaram atividade dependente de tiól de redução de peróxido de hidrogênio e hidroperóxidos orgânicos. A atividade peroxidase da AhpC e Bcp são dependentes, respectivamente, de alquil hidroperóxido redutase subunidade F (AhpF) e do sistema tiorredoxina. Paradoxalmente, a flavoproteína AhpF possui atividade NAD(P)H oxidase, que resulta na produção de peróxido de hidrogênio. As constantes de segunda ordem da reação das proteínas com peróxido de hidrogênio (da ordem de 107 M-1.s-1), determinadas pelo ensaio de cinética competitiva com peroxidase de raiz forte, indicam que ambas possuem atividades peroxidase equivalentes às apresentadas por glutationa peroxidases dependentes de selênio e catalases, ao contrário do descrito na literatura. Por SDS-PAGE não-redutor e pela quantificação de cisteínas livres por DTNB, verificamos que as proteínas possuem mecanismos catalíticos distintos: AhpC é uma 2-Cys Prx típica (com formação de ponte dissulfeto intermolecular), enquanto Bcp é uma 2-Cys Prx atípica (com formação de ponte dissulfeto intramolecular). Para AhpC, a atividade catalítica envolve as cisteínas conservadas (Cys-47 e Cys-165), em contraste, apenas através de estudos de mutação sítio-dirigida e espectrometria de massas conseguimos identificar os resíduos de cisteínas envolvidos na atividade catalítica da Bcp (Cys-47 e Cys-83). A caracterização estrutural de AhpC por cromatografia de exclusão molecular e espalhamento dinâmico de luz mostram que a proteína nativa é um decâmero estável, independentemente do estado de oxidação de suas cisteínas. A caracterização da estrutura cristalográfica de Bcp C47S, inédita para 2-Cys Prx atípicas que possuem as cisteínas ativas separadas por 35 aminoácidos, indica que a proteína possui o enovelamento característico das peroxirredoxinas e que as cisteínas ativas estão localizadas a uma distância média de 12,4 Å. Baseado em dicroísmo circular, apresentamos dados que indicam que a aproximação das cisteínas deve envolver um significativo rearranjo estrutural, que provavelmente se inicia com a formação do intermediário ácido sulfênico na cisteína peroxidásica (Cys-47). Assim, conseguimos elucidar o papel catalítico dessas proteínas, bem como identificar seus sistemas redutores, obtendo informações que podem ser relevantes para o entendimento do mecanismo da patogenicidade da X. fastidiosa. Os resultados apresentados neste trabalho podem contribuir para o desenvolvimento de novas técnicas de controle de praga para a doença CVC em citrus e outras que envolvam a bactéria X. fastidiosa. / The phytopathogenic bacterium Xylella fastidiosa is the etiological agent of Citrus Variegated Chlorosis (CVC) that causes losses of about 100 millions dollars per year in Brazil. During infection, reactive oxygen species play a central role in plant pathogen defense. To survive under oxidative stress imposed by the host, microorganisms express antioxidant proteins, including the peroxiredoxins alkyl hydroperoxide reductase subunit C (AhpC) and bacterioferritin comigratory protein (Bcp). Peroxiredoxins are peroxidases, which rely on an activated cysteine residue to catalyze the reduction of hydroperoxides. By proteome analysis, Smolka et al. (2003) identified the products of ahpc and bcp genes present in whole cell extract of X. fastidiosa. To characterize the function and structure of AhpC and Bcp protein, their genes were cloned in Escherichia coli and the corresponding proteins purified by nickel affinity chromatography. Recombinant proteins presented thiol-dependent peroxidase activity against hydrogen peroxide and organic hydroperoxides. AhpC and Bcp peroxidase activities are dependent on alkyl hydroperoxide reductase subunit F (AhpF), and on thioredoxin system, respectively. Paradoxically, AhpF flavoenzyme possesses hydrogen peroxide-forming oxidase activity. Contrary to classical assumptions, competitive kinetics employing horseradish peroxidase assays showed that the second-order rate constants of AhpC and Bcp reaction with hydrogen peroxide are in the order of 107 M-1.s-1, as fast as the activity of selenium-dependent glutathione peroxidases and catalases. Non-reducing SDS-PAGE and cysteine quantification using DTNB indicated different peroxidasic mechanisms: AhpC is a typical 2-Cys peroxiredoxin (with intermolecular disulfide bond formation), while Bcp is an atypical 2-Cys peroxiredoxin (with intramolecular disulfide bond formation). In contrast to the well-conserved AhpC cysteines responsible for the peroxidase activity (Cys-47 and Cys-165), only through site-specific mutagenesis and mass spectrometry we could identified the cysteine residues involved in the Bcp peroxidase activity (Cys-47 and Cys-83). Structural characterization by size exclusion chromatography and dynamic light scattering revealed that AhpC native protein forms stable and redox state independent decamers. The crystal structure of Bcp C47S, the first 2-Cys Prx with a 35-residue between the active cysteines ever characterized, shows that protein contains the common fold of peroxiredoxins and that active cysteines lies ~12.4 Å away one from the other. Based on circular dichroism, we presented data indicating that disulfide bond formation may require significant conformational changes, which probably is triggered by the peroxidatic cysteine oxidation to sulfenic acid. In conclusion, we elucidated the catalytic mechanisms and reduction systems of AhpC and Bcp proteins that may help to understand the pathogenicity mechanism of X. fastidiosa. These results can contribute to the development of plague control methods against X. fastidiosa.

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