Die Interleukin 1β (IL-1β) vermittelte Signaltransduktion ist für die akute Entzündung von entscheidender Bedeutung, muss aber gleichzeitig streng reguliert werden. Wie setzt das intrazelluläre IL-1β-Signalnetzwerk den extrazellulären Nachweis von IL-1β effizient in eine präzise und angemessene zelluläre Reaktion um? Welche Kontrollmechanismen kommen zum Einsatz, um eine angemessene Antwort zu gewährleisten und eine Hypo- oder Hyperantwort zu verhindern? Diese Arbeit charakterisiert die IL-1β-vermittelte Signalwegdynamik in EL4-Zellen mithilfe der Immunpräzipitations-Massenspektrometrie (IP-MS), konkret von MyD88, IRAK4 und IRAK1. Statistischer Analysen identifizierten das Interaktom dieser Proteine nach 15-, 30- und 60-minütiger IL-1β-Stimulation, sowie Proteine, die potenziell an der Runterregulierung des IL-1β-Signalwegs beteiligt sind. Um zu verstehen, wie das IL-1β-Signalwegnetzwerk die Translationsmaschinerie in EL4 Zellen beeinflusst, um eine angemessene Reaktion zu gewährleisten, untersuchte ich den IL-1β-abhängigen Proteinumsatz mittels gepulste stabile Isotopenmarkierung durch Aminosäuren in der Zellkultur (pSILAC) in Kombination mit Azidohomoalanin (AHA)- Klickchemie und MS nach IL-1β-Stimulation. Das Ergebnis aller Proteomik-Untersuchungen war die Identifizierung des TNFα-induzierten Proteins 3 (Tnfaip3) interagierendes Protein 1 (TNIP1) als potenziellen Kandidaten für die Herunterregulierung des IL-1β-Signalwegs. Nach IL-1β-Stimulation kolokalisiert TNIP1 mit allen Myddosomen-Proteinen sowie mit der Deubiquitinase Tnfaip3. Mittels CRISPR/Cas9 erzeugte ich eine TNIP1-KO-EL4 Zelllinie. Nach IL-1β Stimulation zeigten TNIP1-KO-Zellen vermehrt phosphoryliertes p65, aber verringertes phosphoryliertes JNK sowie eine langfristig verringerte IL-2-Sekretion. Daher ist TNIP1 nicht nur an der Herunterregulierung des NF-κB-Signalwegs beteiligt, sondern aktiviert auch den MAPK-Signalweg. / Interleukin 1β (IL-1β)-mediated signal transduction is crucial for acute inflammation, but at the same time needs tight regulation. The IL-1β-mediated signal transduction is encoded by the spatial and temporal dynamics of downstream signaling networks. How does the intracellular IL-1β signaling network efficiently convert the extracellular detection of IL-1β into a precise and proportionate cellular response? What control mechanisms apply in order to ensure a proportionate response and pre- vent a hypo- or hyper response? This study characterizes the IL-1β mediated signaling dynamics using immunoprecipitation purification mass spectrometry (IP-MS). specifically, of MyD88, IRAK4, and IRAK1. Statistical analyses identified the interactome of these proteins after 15-, 30-, and 60-minute of IL-1β stimulation, as well as proteins potentially involved in IL-1β signaling downregulation using pathway annotation analysis. Further, in order to understand how the IL-1β signaling network affects the translational machinery in EL4 cells to ensure a proportionate response, , I investigated IL-1β-dependent protein turnover in EL4 cells. Specifically, I applied pulsed stable isotope labeling by amino acids in the culture (pSILAC) combined with azidohomoalanine (AHA)-click chemistry and MS after 30-, 60-, 120- and 240-min of IL-1β stimulation. The result of these proteomics approaches was the identification of TNFα induced protein 3 (Tnfaip3) interacting protein 1 (TNIP1) as a potential candidate in IL-1β signal downregulation. TNIP1 co-localizes with all myddosome proteins and the deubiquitinase Tnfaip3 after IL-1β stimulation. I generated a TNIP1 KO EL4 cell line using CRISPR/Cas9. After IL-1β stimulation, TNIP1 KO cells show increased levels of phosphorylated p65, but decreased levels of phosphorylated JNK as well as decreased levels of long-term IL-2 secretion. Therefore, TNIP1 is not only involved in downregulatory NF-κB signaling but activates MAPK pathway.

No description available.

No description available.

In bacteria, protein synthesis can occur tightly coupled to transcription. In eukaryotes, it is believed that translation occurs solely in the cytoplasm; I test whether some occurs in nuclei and find: (1) L-azidohomoalanine (Aha) – a methionine analogue (detected by microscopy after attaching a fluorescent tag using ‘click’ chemistry) – is incorporated within 5 s into nuclei in a process sensitive to the translation inhibitor, anisomycin. (2) Puromycin – another inhibitor that end-labels nascent peptides (detected by immuno-fluorescence) – is similarly incorporated in a manner sensitive to a transcriptional inhibitor. (3) CD2 – a non-nuclear protein – is found in nuclei close to the nascent RNA that encodes it (detected by combining indirect immuno-labelling with RNA fluorescence in situ hybridization using intronic probes); faulty (nascent) RNA is destroyed by a quality-control mechanism sensitive to translational inhibitors. I conclude that substantial translation occurs in the nucleus, with some being closely coupled to transcription and the associated proof-reading. Moreover, most peptides made in both the nucleus and cytoplasm are degraded soon after they are made with half-lives of about one minute. I also collaborated on two additional projects: the purification of mega-complexes (transcription ‘factories’) containing RNA polymerases I, II, or III (I used immuno-fluorescence to confirm that each contained the expected constituents), and the demonstration that some ‘factories’ specialize in transcribing genes responding to tumour necrosis factor α – a cytokine that signals through NFκB (I used RNA fluorescence in situ hybridization coupled with immuno-labelling to show active NFκB is found in factories transcribing responsive genes).

Ein Ansatz der Darstellung von neuartigen funktionalen Materialien basiert auf der Synthese von Foldameren mit charakteristischen Eigenschaften, die eine Kontrolle über Formgebung und Gestaltung der Makromoleküle und derer Aggregate zulassen. Bislang sind gerade größere Foldamerstrukturen definierter Größe und Form meist schwer darstellbar und eine strukturelle Modifizierbarkeit nicht ohne weiteres möglich. In dieser Arbeit konnte gezeigt werden, dass die hohe Effizienz der seit 2002 bekannten Kupfer(I)-katalysierten 1,3-dipolaren Azid-Alkin-Cycloaddition, kurz “Klick“-Reaktion genannt, verwendet werden kann, um neuartige heteroaromatische Gerüste für die Konstruktion von diversen (makromolekularen) Strukturen zu generieren. Hierbei wird der bei der Reaktion entstehende Triazol-Ring gezielt als funktionale und strukturgebende Einheit genutzt. Zunächst wurden auf einfache und hochmodulare Weise 2,6-Bis(1-aryl-1,2,3-triazol-4-yl)pyridine (BTPs) dargestellt, die in einer hufeisenförmigen, planaren Konformation vorliegen und sich daher als helikogene Einheiten für die Konstruktion von helikalen aromatischen Foldameren eignen. Zudem stellen die BTP-Strukturen eine neue Klasse von pyridinzentrierten, tridentaten Liganden dar. Sie koordinieren an eine Vielzahl von Übergangsmetallionen unter Ausbildung von Metallkomplexen, die über interessante magnetische und lumineszierende Eigenschaften verfügen. Durch die Koordination, aber auch bei Protonierung, lassen sich die BTP-Gerüste von der gebeugten anti-anti-Konformation in eine gestreckte syn-syn-Konformation schalten. Dies wurde in Lösung, im kristallinen Festkörper und an der Flüssig-Fest-Grenzfläche zu Graphit untersucht. Über Selbstorganisation großflächig ausgebildete hochgeordnete BTP-Monoschichten an der Graphitoberfläche lassen sich mit Hilfe der Rastertunnel-Mikroskopie visualisieren und durch oben genannte externe Stimuli umstrukturieren. Eine neue Klasse von (BTP-basierten) responsiven heteroaromatischen oligomeren und polymeren Foldameren wurde mit Hilfe der „Klick“-Reaktion generiert. Die Oligomeren, sogenannte ”Klickamere“, mit einer Länge von 17 aromatischen Ringen zeigen in polaren Lösungsmitteln ein ausgeprägtes helikales Faltungsverhalten. Ein aus 17 aromatischen Ringen bestehender Foldamerstrang ist gegenüber Chloridionen responsiv, wobei es durch die Wechselwirkung mit diesem achiralen Stimulus bemerkenswerter Weise zu einer Helixinversion kommt. Die entsprechenden responsiven Polymere falten in eine stabile helikale Konformation, die bei Zugabe von Metallionen aufbricht und zu der Bildung von koordinativ kreuzverlinkten, stark viskosen Gelen führt. / One approach to develop novel functional materials is based on the synthesis of macromolecules with characteristic properties, in particular foldamers. However, preparation and structural variation of macromolecules of controllable size and specific shape are often cumbersome and versatile synthetic routes are still needed. In this dissertation, the high efficiency of the so called “click”-reaction, i.e. the Cu(I)-catalyzed Huisgen-type 1,3-dipolar cycloaddition, has been used to design a novel class of heteroaromatic (macromolecular) scaffolds. In these structures the formed triazole moieties constitute an essential integral part rather than a mere connecting unit. In a first step, structurally varying 2,6-Bis(1-aryl-1,2,3-triazolyl-4-yl)pyridines (BTPs) have been generated in an easy and modular way. The BTP scaffold adopts a kinked conformation and therefore functions as helicogenic building block for the construction of helical foldamers. Additionally, the BTP framework is responsive towards protonation and transition metal ion complexation, thereby undergoing a significant structural change from the kinked anti-anti into the extended syn-syn conformation. The conformational switching has been investigated in solution and in the solid state but can also be visualized at the liquid-solid interface on graphite by STM imaging. The BTPs represent a novel class of pyridine-centered, tridentate ligands, which form complexes with interesting magnetic and luminescent properties by the coordination to numerous transition metal ions. Varying heteroaromatic oligomeric and polymeric foldamers with remarkable properties have been generated using the “click”-reaction as synthesis tool. The BTP building blocks, which have (partly) been integrated into the backbones, support the stability of the helical conformation and provide responsiveness towards external stimuli. Three oligomer series of different length have been synthesized and analyzed. Oligomers consisting of 17 aromatic rings, termed clickamers, fold into a helical conformation in polar solvents. One of the three clickamers shows an unexpected phenomenon of helix inversion upon interaction with chloride ions as an achiral stimulus. The corresponding polymeric strands fold into an even more stable helical conformation, which breaks up upon exposure to transition metal ions leading to coordinatively crosslinked, highly viscous gels.

Today, the growing and aging population, and the rise of new global threats on human health puts an increasing demand on the healthcare system and calls for preventive actions. To make existing medical treatments more efficient and widely accessible and to prevent the emergence of new threats such as drug-resistant bacteria, improved diagnostic technologies are needed. Potential solutions to address these medical challenges could come from the development of novel lab-on-chip (LoC) for point-of-care (PoC) diagnostics. At the same time, the increasing demand for sustainable energy calls for the development of novel approaches for energy conversion and storage systems (ECS), to which micro- and nanotechnologies could also contribute. This thesis has for objective to contribute to these developments and presents the results of interdisciplinary research at the crossing of three disciplines of physics and engineering: electrokinetic transport in fluids, manufacturing of micro- and nanofluidic systems, and surface control and modification. By combining knowledge from each of these disciplines, novel solutions and functionalities were developed at the macro-, micro- and nanoscale, towards applications in PoC diagnostics and ECS systems. At the macroscale, electrokinetic transport was applied to the development of a novel PoC sampler for the efficient capture of exhaled breath aerosol onto a microfluidic platform. At the microscale, several methods for polymer micromanufacturing and surface modification were developed. Using direct photolithography in off-stoichiometry thiol-ene (OSTE) polymers, a novel manufacturing method for mold-free rapid prototyping of microfluidic devices was developed. An investigation of the photolithography of OSTE polymers revealed that a novel photopatterning mechanism arises from the off-stoichiometric polymer formulation. Using photografting on OSTE surfaces, a novel surface modification method was developed for the photopatterning of the surface energy. Finally, a novel method was developed for single-step microstructuring and micropatterning of surface energy, using a molecular self-alignment process resulting in spontaneous mimicking, in the replica, of the surface energy of the mold. At the nanoscale, several solutions for the study of electrokinetic transport toward selective biofiltration and energy conversion were developed. A novel, comprehensive model was developed for electrostatic gating of the electrokinetic transport in nanofluidics. A novel method for the manufacturing of electrostatically-gated nanofluidic membranes was developed, using atomic layer deposition (ALD) in deep anodic alumina oxide (AAO) nanopores. Finally, a preliminary investigation of the nanopatterning of OSTE polymers was performed for the manufacturing of polymer nanofluidic devices. / <p>QC 20140509</p> / Rappid / NanoGate / Norosensor

Le travail présenté dans ce mémoire avait pour but de synthétiser de nouvelles molécules dont l’architecture donne accès à des complexes hétérobimétalliques aux propriétés intéressantes pour l’imagerie médicale multimodale. Dans ce manuscrit plusieurs points principaux ont donc été abordés. La première partie de se travail porte sur la synthèse et la caractérisation des ligands. Nous décrivons dans ce manuscrit la synthèse de cinq nouveaux ligands hétérobismacrocycliques basés sur l’association d’une porphyrine et d’un ou de plusieurs dérivés du cyclène. Ces ligands présentent la particularité d’être solubles en milieux aqueux. Au cours des synthèses, nous avons ciblé les améliorations à apporter à notre travail et élaboré une nouvelle voie de synthèse qui permet d’accéder, en seulement six étapes, à un ligand composé d’une porphyrine, d’un dérivé du cyclène et d’une fonction amine libre qui permettra de greffer le ligand sur un vecteur biologique. La seconde partie de ce manuscrit porte sur l’incorporation de centres métalliques dans les ligands synthétisés ainsi que l’étude de leur efficacité en tant qu’agent de contraste de l’IRM. Nous décrivons la synthèse de cinq complexes de gadolinium (III) et de trois complexes hétérobimétalliques associant du gadolinium (III) et du cuivre (II). En effet, le gadolinium est actuellement utilisé dans les agents de contraste de l’IRM et un des isotopes du cuivre, le cuivre-64, est utilisé en imagerie PET. Nous décrivons un protocole de mesure de la relaxivité des complexes à haut et à bas champs magnétiques. Cinq complexes présentent des valeurs de relaxivité quatre fois supérieures à celles des agents de contraste commerciaux de l’IRM. Le dernier chapitre de ce travail porte sur la synthèse, la caractérisation et les études photophysiques de quatre antennes moléculaires associant des porphyrines et des BODIPY. Nous avons développé deux voies de synthèses originales. La première est basée sur la création de liaisons bore-oxygène en substituant les atomes de fluor portés par l’atome de bore des BODIPY. L’autre voie de synthèse utilise la réaction de cycloaddition dipolaire d’Huisgen. Nous décrivons des études photophysiques qui mettent en évidence des transferts d’énergie du BODIPY vers la porphyrine Nous avons mis en évidence le premier exemple de transfert d’énergie d’une porphyrine vers un BODIPY grâce à un système “blue” BODIPY étendu couplé à des porphyrines par une réaction de chimie “click”. / The goal of my PhD thesis was to synthesize new molecules, which give access to heterobimetallic complexes with interesting properties for multimodal imaging. In this manuscript, several main points have been studied. The first part of this work concerns the synthesis and characterization of ligands. We describe here the synthesis of five new ligands based on the association of one porphyrin and one or several cyclen derivatives. Those ligands are water-soluble. During the synthesis, we have targeted improvements to our work and developed a new synthetic pathway, which allowed us to obtain one ligand incorporating a porphyrin, a cyclen derivative and a free amine function. This function could be activated to further graft the ligand onto a biological vector. The second part of this manuscript describes the chelation of metallic centers into the ligands and the study of their efficiency as MRI contrast agents. We describe the synthesis of five gadolinium (III) complexes and three heterobimetallic complexes associating gadolinium (III) with copper (II). Indeed, gadolinium is currently used in contrast agents for MRI and the radioactive isotope of copper, copper-64 is used in PET imaging. We describe also a procedure to measure the relaxivity of the gadolinium complexes at low and high magnetic fields. Five complexes exhibit relaxivity values five times larger than commercially available MRI contrast agents. The last part of this work is related to the synthesis, characterization and photophysical studies of four molecular antennas incorporating porphyrins and BODIPY. We describe two original synthetic pathways. The first one is based on the formation of boron-oxygen bonds by substitution of the fluorine atoms bound to BODIPY boron atom. The second synthetic pathway involves the Huisgen’s dipolar cycloaddition. We describe photophysical data and give evidences of the energy transfer from BODIPY to porphyrin. We present also the first example of energy transfer from porphyrin to BODIPY in the system obtained by “click” chemistry involving an extended “blue” BODIPY.

The thesis entitled “Novel Cationic Gemini Lipids, Click Chemistry Based Adducts and Amphiphile-Capped Silver Nanostructures: Synthesis, Aggregation and Biological Properties” elucidates the design, synthesis, aggregation and gene transfection properties of novel gemini cationic lipids based on cholesterol and pseudoglyceryl backbone, and click chemistry based adducts. This thesis also elucidates the synthesis and aggregation properties of silver nanoparticles loaded cationic liposomes and silver nanorods stabilized by micellar solutions of gemini surfactants. The work has been divided into six chapters. Chapter 1: Introduction: Membrane Formation from Cholesterol-based Cationic Lipids and their use as Non-Viral Gene Delivery Agents This chapter describes the importance of cholesterol in biological membranes, the aggregation properties of cholesterol-based cationic lipids and their interactions with phospholipid membranes. This chapter also gives a comprehensive account of the research towards the development of novel cationic cholesterol-based monomeric and gemini lipids. It also reviews the utilization of cholesterol-based cationic monomeric and gemini lipids in gene transfection properties. Chapter 2A: Effect of Hydroxyl group on the Cationic Headgroups of Cholesterol-based Gemini Lipids on their Aggregation, DNA Binding Properties and Interaction with Phospholipid Membranes This chapter describes the syntheses and aggregation properties of two series of cholesterol-based monomeric and gemini cationic lipids with and without hydroxyl functionality (Figure 1). The gemini lipids of a given series differ in their spacer polymethylene -(CH2)n- chain lengths between the cationic headgroups. Figure 1. Molecular structures of non-hydroxylated and hydroxylated cationic cholesterol-based gemini lipids and their monomeric counterparts. All monomeric and gemini lipids were found to generate stable suspensions in aqueous media. Electron microscopic studies showed that all the lipids form vesicular aggregates in aqueous media. The structures seen under TEM for the non-hydroxylated series of monomeric (C-M) and gemini lipids are of variable sizes, they appeared like separated vesicular aggregates. For the hydroxylated series of lipids, however, both the monomeric lipid aggregates (CH-M) and aggregates of their gemini counterparts were found to be ‘connected’ with each other to form elongated chain of aggregates of different length scales. XRD studies with the cast films of lipids revealed that the monomeric lipids of either series have higher bilayer width than the corresponding gemini lipids. Incorporation of the -(CH2)n- spacer units at the head group level joining the two monomeric units lowered the bilayer thicknesses of both series of the lipid aggregates. Thus the monomeric lipids (C-M and CH-M) appear to form nearly regular bilayer type arrangements whereas gemini lipids form interdigited and tilted bilayer arrangements in their aggregates. Calorimetry studies of the coaggregates showed that ~10 mol-% of most of the cholesterol gemini lipids is enough to abolish the phase transition of DPPC membranes whereas more than 10 mol-% is required in case of their monomeric counterparts. Further these thermotropic properties depend upon the length of the spacer of the gemini lipid included in the mixture. We have observed greater quenching of the thermal phase transition of DPPC membranes with 10 mol-% of C-M as compared to CH-M doped liposomes. At 10 mol-% of all the cationic lipid doped DPPC covesicles, only CG-3 doped liposomes showed an observable transition temperature. Maximum broadening of the DPPC transition peak was observed in the case of the gemini lipids, CHG-6 and CHG-12. DNA binding and release studies show that the interactions between gemini lipids and DNA depend upon the nature of the head group as well as the length of the spacer between the cationic head groups. For the non-hydroxylated cholesterol-based cationic lipid series, the monomeric liposomes of C-M facilitates the dissociation of EB from the EB-DNA complex to an extent of 93% at a maximum lipid:DNA ratio of 3.0 whereas the liposomes of CG-4 and CG-12 showed the lowest extent of maximum EB exclusion (~74%) from the EB-DNA complex at lipid:DNA ratio of 3.0. For hydroxylated cholesterol-based cationic lipid series, the monomeric liposomes of CH-M facilitate the dissociation of EB from the intercalated EB-DNA complex to an extent of 81 % whereas the liposomes of CHG-3 showed the minimum binding to DNA. Thus the two monomeric liposomes C-M and CH-M were the more efficient formulations that allow dissociation of DNA from the corresponding lipoplexes. These findings have important being in their gene transfection activity compared their respective gemini lipid counterparts. Chapter 2B: Novel Cholesterol-based Cationic Gemini Lipids possessing Hydroxyethyl group on the Headgroup: Transfection Efficacy and Cell Toxicity Properties This chapter describes the transfection efficacy and cell toxicity properties of five cholesterol based gemini cationic lipids possessing hydroxyethyl functionality on each head group, which differ in the length of the polymethylene spacer [-(CH2)n-] chain (Figure 2). These gemini lipids are important to gene delivery processes as they possess pre-optimized molecular features, e.g., cholesterol backbone, ether linkage and a variable spacer chain between both the headgroups of the gemini lipids. Cationic liposomes were prepared from each of these lipids individually and as a mixture of individual cationic gemini lipid and 1,2-dioleoylphosphatidylethanolamine (DOPE). The gemini lipid with a hydroxyethylated headgroup and a -(CH2)5- spacer, CHG-5 showed the highest transfection activity at N/P (lipid/DNA) ratio of 0.5 and lipid:DOPE molar ratio of 2. Upon comparison of the relevant parameters, e.g., % transfected cells, the amount of DNA transfected to each cell and % cell viability all together against LipofectAMINE 2000, one of the most potent commercially available transfecting agents, the optimized lipid formulation based on CHG-5/DOPE was found to be comparable. In terms of its ability to induce gene-transfer in presence of serum and shelf-life CHG-5/DOPE liposome was found to be better than its commercial counterpart. Recording of confocal images confirmed that in presence of 10% serum using 1.2 µg DNA per well and lipid:DOPE ratio of 1:4 and N/P charge ratio of 0.75, CHG-5 is better than LipofectAMINE 2000. These properties render them to be reagents of practical value for various gene delivery applications. Figure 2. Molecular structures of cholesterol-based cationic monomeric lipid and gemini lipids possessing hydroxyethyl group on the headgroup synthesized. Chapter 3: Bilayer Membrane and Stable Monolayer Forming Properties of Cationic Pseudoglyceryl Gemini Lipids having Polymethylene Spacers and Oxyethylene Linkages This chapter describes the synthesis of five new cationic pseudoglyceryl gemini lipid versions of their monomeric counterpart (Figure 3). Each cationic lipid aggregate in aqueous media was found to form vesicular structures as evidenced from the negatively stained TEM experiments and DLS measurements. XRD experiments with their cast films of aqueous dispersions revealed that introduction of the polymethylene -(CH2)n-spacer chain joining the two monomers decreased the bilayer widths of the gemini lipid aggregates. The inter-lipidic packing and the hydration of the lipid vesicles were examined using fluorescence anisotropy and generalized polarization measurements using membrane-soluble probes, DPH and Paldan respectively. Fluorescence anisotropy measurements showed that the aggregates of lipid 2c with -(CH2)5- spacer chain were highly packed and ordered in the vesicular aggregates than that of the other cationic lipid aggregates in the series. Paldan hydration studies showed that incorporation of the polymethylene -(CH2)n- spacer chains joining two monomeric units lowered the hydration of the gemini lipid aggregates in the solid gel state. Each of these cationic lipid aggregates showed sharp transition temperatures (Tm) as observed from differential scanning calorimetric studies. DSC studies further revealed that the incorporation of oxyethylene group at the linker region of cationic pseudoglyceryl gemini lipid 2a with (CH2)3- spacer chain length lowered the thermotropic phase transition temperature (Tm) of the aggregates in aqueous media when compared with the corresponding gemini analogue without oxyethylene linkages. Langmuir film balance studies showed that each cationic gemini lipid and their monomeric counterpart were able to form stable monolayers at the air-water interphase. We observed that the mean molecular area (collapse area) of each of the cationic lipid obtained from the Langmuir monolayer studies increased with increase in the spacer chain lengths. Figure 3. Molecular structures of the cationic pseudoglyceryl gemini lipids and their monomeric counterpart. Chapter 4: Vesicle and Stable Monolayer Formation from Simple ‘Click’ Chemistry Adducts in Water This chapter describes successful use of Cu(I) catalyzed “Click Chemistry” for the syntheses of a series of hitherto unknown amphiphilic adducts (M1, M2, D1 and T1) which on dispersal in water afforded vesicular aggregates as evidenced from dye entrapment, TEM, SEM, AFM and DLS studies (Figure 4). Figure 4. Molecular structures of triazole based adducts. XRD experiments with their cast films of aqueous suspensions indicate the formation of a tilted bilayer arrangement for the aggregates of M1 whereas regular bilayer structures are predominant for the aggregates derived from M2, D1 and T1. Measurement of pKa values using UV-Vis spectroscopy showed that the aggregates of monomeric click adducts (M1 and M2) possess less pKa value than that of the aggregates of dimeric (D1) and tetrameric (T1) analogues and the values lie within the range of 2.8-3.2. The hydrodynamic diameter of the aggregates of each click adduct increased with decrease in the pH of the media. Thus, the protonation of the triazole groups in the aggregates of each click adduct increased the hydrodynamic diameter. Dye entrapment studies showed that each click chemistry based adduct formed closed vesicular aggregates with inner aqueous compartment in aqueous media. The temperature induced order-to-disorder transitions of the aggregates and the accompanying changes in hydration were examined using high sensitive DSC, fluorescence anisotropy and generalized polarization measurements using a membranesoluble probe, DPH and Paldan respectively. In the solid state, M1 remains as the most hydrated species whereas in the fluidized phase, D1 maintains as the most hydrated aggregate. Clearly simple variation in the adduct molecular architecture bring about significant changes in their packing in aggregates and also the hydration of the resulting vesicles. Langmuir monolayer studies confirmed that these click adducts do form stable monolayers as well on water subphase at the air-water interface. We also calculated the mean molecular areas from the Langmuir monolayer studies and as perhaps expected the adduct T1 has the highest head group area. Thus click chemistry based simple triazole adducts, which can be very easily prepared, are good candidates for further investigations involving syntheses of novel self-assembling structures. Chapter 5: Lipid Mediated Synthesis of Silver Nanoparticles, their Physical Characterizations and DNA Binding Abilities In this chapter, work on the Ag-NP (silver nanoparticle) loaded liposomes preparation using four cationic lipids (1-4) in which the Ag-NPs were entrapped within lipid bilayer has been described. A novel method was developed to synthesize the Ag-NPs where the lipid itself capped and stabilized the Ag-NPs. Consequently there was no need of inclusion of any other capping agents like citrate. Confocal microscopy confirmed that these Ag-nanoparticles are fluorescent in character. It was also demonstrated that silver nanoparticles are indeed entrapped in lipid bilayer with transmission electron microscopy (TEM). DLS experiments provided information about the hydrodynamic diameter of the lipid vesicles which increased with the increase in Ag concentrations. This could be due to the ‘loosening’ of the lipid packing in vesicles. Zeta potential measurements showed that the zeta potential value decreased with the increase in the concentration of Ag-NPs in the cationic lipid vesicles. XRD studies with the cast films of the lipid or Ag-NP loaded lipid suspensions revealed that when the Ag-NPs get entrapped into the bilayer of the multilamellar vesicles of the lipid in the aqueous media, the unit bilayer thickness of the aggregates increased. Paldan experiments showed that with the incorporation of Ag-NPs in the lipid vesicles, the hydration of the lipid vesicles increased to a significant extent but the phase transition temperatures remained practically unaltered for all the lipids. Fluorescence anisotropy experiments revealed that the hydrocarbon chain packing of the lipid vesicles ‘loosens’ with the incorporation of Ag-NPs. Ag-NP loaded liposomes showed enhanced DNA binding ability and also the presence of Ag-NPs in cationic liposomes induced the release of DNA from silver nanoparticle-loaded lipoplexes more effectively. Figure 5. Molecular structures of the cationic lipids mentioned in the present chapter. Chapter 6: Dependence of Spacer Chain Lengths in the Synthesis of Ag-Nanorods in Gemini Cationic Surfactant Micelles Figure 6. Chemical structures of cationic gemini surfactants. This chapter describes the synthesis of Ag-nanospecies by seed-mediated wet synthesis method using four gemini surfactants (16-2-16, 16-4-16, 16-5-16 and 16-1216) as the capping agents (Figure 6). For this, we first synthesized Ag-nanoseeds of diameter ~7 nm stabilized by trisodium citrate (as capping agent). Then the solution containing Ag-nanoseeds was used to synthesize Ag-nanorods of different aspect ratios. It was that with decreasing Ag-nanoseed concentration, the aspect ratios of Agnanorods stabilized by gemini surfactants (16-2-16 and 16-4-16) increased gradually as evidenced from TEM images. These Ag-nanoseeds and Ag-nanorods were further characterized using UV-Vis spectroscopy (to know the surface plasmon bands), transmission electron microscopy (TEM), energy-dispersive X-ray spectroscopy (EDAX) and X-ray diffraction (XRD). It was observed that when gemini surfactant 164-16 was used to stabilize Ag-nanorods, the λmax of the longitudinal band shifted more towards the red region (red-shift) as observed by UV-Vis spectroscopy when compared to that of gemini surfactant with shortest spacer, 16-2-16. Thus the gemini surfactants with shorter -(CH2)2- and -(CH2)4- spacer chains promoted the growth of Ag-nanorods in their micellar solutions whereas -(CH2)5- and -(CH2)12- spacer chains of gemini surfactants did not. So, the growth of Ag-nanorods in micellar solutions is found to be highly spacer-chain length specific. TEM micrographs revealed that the aspect ratios of Ag-nanorods stabilized by gemini surfactants 16-4-16 are larger than those compared to the Ag-nanorods stabilized by gemini surfactants 16-2-16 at a particular amount of Agnanoseed solution. TEM images of the samples containing micellar solutions of gemini surfactants 16-5-16 and 16-12-16 showed that the formation of only Ag-nanoparticles of larger sizes (compared to Ag-nanoseeds stabilized by trisodium citrate) and Agnanoprisms irrespective of the amount of Ag-nanoseed solution added. No Ag-nanorod formation in the micellar solutions of gemini surfactants 16-5-16 and 16-12-16 was observed. Gemini surfactants (16-2-16 and 16-4-16) formed bilayer arrangements to facilitate the growth and stabilization of Ag-nanorods in aqueous media where the inner layer is attached to the Ag-nanorod surface through the gemini surfactant ammonium headgroups. X-ray diffraction (XRD) studies showed that these Ag-nanorods stabilized by gemini surfactants 16-2-16 and 16-4-16 crystallized in the aqueous media via (111), (220) and (222) lattice faces. Thus this study demonstrated the way one can control structures and shapes of the silver nanoobjects using gemini surfactant micelles. (For structural formula pl refer the thesis)

Les chitooligosaccharides (COS) présentent des propriétés biologiques intéressantes telles que l'activité antimicrobienne, antifongique et antitumorale. Dans ce travail, nous avons utilisé les COS pour des applications très diverses, telles que l'ingénierie des cellules neuronales (blocage de la formation du réseau périneuronal), la complexation des cations Fe2+ et Fe3+ pour la synthèse de particules supermagnatiques et enfin pour le développement de conjugués fonctionnels à base de COS. Dans le cadre de ces études en partenariat, nous avons travaillé sur l'élaboration de chitooligosaccharides à structure contrôlée afin d’étudier leurs propriétés physico-chimiques ou biologiques. Des modifications de chitooligosaccharides ont été effectuées dans ce travail de deux façons: la modification par N-substitution et la modification par le groupe aldéhyde du résidu 2,5-anhydro-D-mannofuranose (amf) à l'extrémité réductrice des chitooligosaccharides. Les premiers types de COS consistent en la désamination suivie d'une réaction de N-réacétylation afin de contrôler (partiellement) à la fois le degré moyen d'acétylation et le degré moyen de polymérisation. La seconde stratégie consiste en la synthèse de nouveaux COS fonctionnalisés à leur extrémité réductrice par amination réductrice et oximation avec différents groupes chimiques cliquables (c'est-à-dire alcyne, alcène, azide, thiol et hydrazide). En fonction des COS fonctionnalisé ciblé, différentes techniques d'analyse ont été réalisées pour analyser pleinement leurs caractéristiques structurales telles que la spectroscopie RMN, la spectrométrie de masse MALDI-TOF, la chromatographie HPLC, la spectroscopie RAMAN et la chromatographie SEC. Des structures chimiques spécifiques de chitooligosaccharides modifiés ont été étudiées dans le but de les utiliser pour moduler le réseau périneural de neurones et l'établissement de connexions synaptiques. Nous avons également montré que les COS solubles permettent la précipitation des nanoparticules supramagnétiques de Fe3O4 avec un revêtement COS en les rendant moins toxiques. Enfin, les COS fonctionnalisés à leur extrémité réductrice pourraient être des intermédiaires utiles pour le développement de nouveaux conjugués fonctionnels à base de chitosane / Chitooligosaccharides (COS) classically present several biological properties such as anti-microbial, anti-tumor and anti-fungal activity. In this work, we used COS for widely different applications, such as tissue engeneering of neuronal cells (blocking of perineuronal net formation), the complexation of iron cations (Fe2+ and Fe3+) for the synthesis of supermagnatic particle and finally for the development of advanced functional COS-based conjugates. In this partnership studies, we worked on the elaboration of controlled structure chitooligosaccharides in order to decipher their physico-chemical or biological properties. Further modification of chitooligosaccharides was performed in this thesis in two ways: modification via amine N-substitution and the modification via the 2,5-anhydro-D-mannofuranose (amf) aldehyde group located at the reducing end of chitooligosaccharides. The first COS types consist in the nitrous depolymerization followed by N-acetylation in order to (partly) control both the mean degree of N-acetylation and the degree of polymerization. The second consist in the synthesis of new COS-based building blocks functionalized at their reducing end by reductive amination and oximation with different clickable chemical groups (i.e. alkyne, alkene, azide, thiol, and hydrazide). Depending on the targeted functionalized COS, different analysis techniques were carried out to fully characterize such as NMR spectroscopy, MALDI-TOF mass spectrometry, HPLC-chromotography, RAMAN spectroscopy and SEC chromatography. Specific chitooligosaccharides were studied in the objective to use them to modulate the perineuronal net of neurons, and the establishment of synaptic connections. We also showed that water soluble COS permit the precipitation of supramagnetic Fe3O4 nanoparticles with a COS coating and succeded in decreasing their toxicity. Finally we have shown that COS-based building blocks could be useful intermediates for the development of advanced functional COS-based conjugates such as COS-b-PEG diblock copolymers

Suite à la première thèse sur le greffage et l’adsorption physique successives de sélecteurs chiraux dans des tubes ouverts en électrochromatographie capillaire (ECC ou CEC) chirale, menée par le Dr Guillaume Pédéhontaa-Hiaa au sein de l’équipe du laboratoire COBRA (IUT d’Evreux), nous avons développé des phases stationnaires chirales covalentes (CSPs) à base de cyclodextrines (CDs) en tubes ouverts et des CSPs sur supports monolithiques pour l’emploi en CEC. Nous avons ainsi évalué les paramètres électrochromatographiques et la stabilité de ces CSPs en séparant une variété de racémiques neutres et chargés. L’influence de la température d’analyse, le potentiel appliqué ainsi que la nature et le pH des électrolytes sur la qualité des électrochromatogrammes ont été étudié en CEC chirale. Cette étude se divise en deux grandes parties. La première concerne les CSPs élaborées sur colonnes à tubes ouverts pour l’OT-CEC. Il s’agit initialement de graver la surface interne d’un capillaire de silice de 50 μm de diamètre interne à l’aide d’une solution de bifluorure d’ammonium dans le but premier d’augmenter considérablement sa surface spécifique et d’immobiliser en surface une grande quantité de sélecteurs chiraux à base de β-CD. Nous avons alors décrit des greffages covalents de CDs anioniques (Scc-β-CD et CM-β-CD) et d’un polymère anionique de CDs (p-CM-β-CD-) en surface de capillaire de gel de silice gravée et modifiée chimiquement par l’aminopropyltriéthoxysilane (APTEOS). Les greffages des sélecteurs ont été reproduits dans les mêmes conditions que dans la thèse rapportée précédemment en électrophorèse. L’originalité de la construction de ces CSPs réside dans la rapidité et la simplicité du couplage dit péptidique à température ambiante, des sélecteurs carboxylés sur des colonnes préalablement gravées. Ce greffage nécessite des agents de couplage peptidique solubles dans l’eau tels que 1-Ethyl-3-(diméthylaminopropyl)carbodiimide (EDC) et le N-Hydroxysuccinimide (NHS). Il peut aussi être obtenu de manière moins efficace avec d’autres agents solubles en milieu organique tels que le O-(Benzotriazol-1-yl)-N,N,N’,N’-tétraméthyluronium tétrafluoroborate et la triéthylamine (TBTU/TEA). Chaque étape menant aux CSPs a été caractérisée par une étude de flux électroosmotique (FEO) en OT-CEC. Des analyses en AFM et en MEB nous renseignent d’avantage sur le succès du procédé « etching » de nos capillaires. La deuxième grande partie de cette étude traite de la synthèse in-situ de CSPs sur des colonnes de type polymères monolithes organiques et un monolithe hybride à base de sol gel. Des post modifications de surface de ces supports monolithiques nous ont permis d’immobiliser de façon covalente et non covalente des sélecteurs de β-CD en surface des volumes macroporeux. Deux collaborations ont vu le jour pour atteindre ces objectifs. La première eut lieu avec le Dr Thuy Tran et le Pr Myriam Taverna de la Faculté de Pharmacie de Chatenay Malabry (UMR 8612), durant laquelle nous avons reproduit une colonne monolithe organique de type méthacrylate, porteuse de groupements phosphate dans l’optique d’adsorber physiquement en surface le polymère cationique de CDs (p-CD+) que nous a transféré le Pr Benjamin Carbonnier et d’évaluer les capacités de discrimination chirale de cette nouvelle CSP en m-CEC. La seconde collaboration a eu lieu avec le Dr Mohamed Guerrouache et le Pr Benjamin Carbonnier au sein du laboratoire ICMPE de Thiais, où nous avons synthétisé des colonnes monolithiques organiques à base d’acrylates dans le but de greffer en surface de façon covalente et non covalente les CDs et polymères de CDs et d’évaluer ces nouvelles CSPs en m-CEC. La troisième phase stationnaire monolithique employée est celle décrite par le Dr Huihui Yang qui décrit un monolithe hybride porteur de groupements sulfonates nous permettant par la suite d’immobiliser électrostatiquement le p-CD+ sur le réseau poreux et d’évaluer cette nouvelle CSP en m-CEC. / New chiral stationary phases have been prepared for Open Tubular and monolithic columns used in electrochromatography capillary. In order to separate racemic mixtures such as flavonoïd, Hidantoïn derivatives, Binaphtalene-2, 2-hydrogenophosphate and others chiral solutes, we use the β-cyclodextrin forms as chiral selector. Besides, β-cyclodextrin seems to be the most efficient chiral selector in chromatography since it is able to complex and dissolve optical organic isomers in an aqueous media, this chiral selector is able to dissolve even lipophilic molecule with high weight. The complexation is based on interactions with β-cyclodextrin. This study aims to elaborate new chiral stationary phase for CEC using β-cyclodextrin polymers and β-cyclodextrin derivatives. Two approaches were used: Firstly, covalent stationary phases coating with carboxymethyl-β-cyclodextrin polymers and oligomers containing carboxyl’s group had been experimented for open tubular and monolithic column in CEC. Then a non-covalent coating cationic polymer of β-cyclodextrin’s derivatives was immobilized (polytrimethyl ammonium β-CD) on continuous organic monoliths bearing anionic’s group. Prior to the covalent coating of the CD’s chiral selector for OT-CEC and m-CEC, we needed to modify the silicate surface and the monolithic surface with a primary amine silicate1,2 (aminopropyltriethoxysilane) and EDA, an amino-organic moiety (Ethylene diamine). The stability of the bonded organic moiety (APTEOS, EDA) were studied by CEC at different pH with constant ionic strength’s buffer. In this way, graft of carboxymethyl-β-cyclodextrin polymer on silica inner surface modified by APTEOS and on NAS-co-EDMA surface modified by EDA succeeded in activating and covalently coupling reagent as EDC and NHS (1-ethyl-3(-3-dimethtylaminopropyl) carbodiimide and N-hydroxysuccinimide, respectively3) with carboxymethyl’s group of carboxymethyl-β-cyclodextrin . The resultant stationary phase lead to stable chiral stationary phases, easier to prepare starting by coupling the selector to the amine’s group using EDC and NHS. In order to optimize enantio-separations by increasing the specific surface of open tubular columns, we reproduce the etching process to bared capillaries with ammonium bifluoride solution, referred to Pesek’s process4. By this mean, we increase dramatically the specific surface of bared capillaries before anchoring CDs polymers to silicate surfaces modified by APTEOS. Finally due to etching process, we obtain a covalent bonded Chiral Stationary Phase (CSP) which led to more efficient and resolvent enantio-separations by CEC. To describe, in another way, the non-covalent coating of CSP, we immobilised a cationic polymer (polytrimethyl ammonium β-CD+) on two kind of continuous organic and silica hybrid monoliths bearing sulfonate5 and phosphate’s groups. Based on precedent results for OT-CEC enantio-separation with LbL stationary phase7, using successive layers charged polymers to separate racemic mixture in CEC, we decided to adsorb a polycationic polymer hydrosoluble onto the silica hybrid monolith column to form chiral stationary phase (CSP) polytrimethyl ammonium β-cyclodextrin. This way of modification for monolithic surface by chiral selectors is nowadays highly efficient and attractive for CEC. The effect of the matrix and the coating’s nature are discussed by comparing the chromatographic parameters.