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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
51

Efeito do treinamento físico aeróbico sobre a atrofia muscular associada à insuficiência cardíaca: contribuição do sistema ubiquitina proteassoma dependente de ATP / Effects of aerobic exercise training on skeletal muscle atrophy associated with heart failure: role of ubiquitin-proteasome pathway

Telma Fátima da Cunha 25 March 2010 (has links)
A atrofia está associada ao aumento da degradação protéica em doenças sistêmicas, sendo o sistema proteolítico ubiquitina proteassoma (SUP) uma das principais vias envolvidas. Contudo, pouco é conhecido sobre a contribuição do SUP à atrofia desencadeada pela insuficiência cardíaca (IC). Sabendo dos benefícios do treinamento físico aeróbico (TFA) e que os mecanismos moleculares envolvidos na atrofia na IC ainda não estão esclarecidos, nessa dissertação investigamos: 1) a contribuição do SUP para a atrofia associada à IC em 2 modelos experimentais: um modelo genético de camundongos com hiperatividade simpática (HS), e um modelo de infarto do miocárdio (IM) em ratos e 2) o efeito do TFA sobre a atrofia associada à IC e sobre o SUP. Na HS verificamos aumento da expressão das E3 ligases, da deubiquitinase USP28, das proteínas ubiquitinadas e da atividade do proteassoma no sítio quimiotripsina, sendo que o TFA reduziu a expressão dos componentes alterados. No IM, observamos disfunção cardíaca não associada à IC, porém, com aumento da expressão de Atrogin-1; enquanto o TFA não produziu efeitos significantes. Dessa forma, os dados sugerem a participação do SUP na atrofia desencadeada pela IC na HS e, que o TFA previne a atrofia por reduzir a expressão/atividade de alguns componentes do SUP; e, que no IM, o aumento da expressão de Atrogin-1 precedeu a perda de massa muscular / Skeletal muscle atrophy is associated with increased protein degradation in systemic diseases, which seems to be mainly related to ubiquitin-proteasome system (UPS). However, little is known about UPS contribution to the heart failure-induced muscle atrophy (HF-MA). Likewise, aerobic exercise training (AET) has been established as an adjuvant therapy for HF and molecular mechanisms underlying HF-MA has not been clarified yet. The objectives of the study were: 1) to verify UPS contribution for HF-MA in 2 experimental models: sympathetic hyperactivity-induced HF (α2A/α2CARKO) in mice, and myocardial infarction model (MI) in rats and 2) AET effects on HF-MA and UPS. In α2A/α2C ARKO mice, we observed activation of UPS characterized by increased mRNA levels of E3 ligases Atrogin-1 and E3-a, deubiquitinating enzyme USP28, increased levels of ubiquitinated proteins and chymotrypsin-like proteasome activity. AET prevented HF-MA in the α2A/α2C ARKO by reducing of UPS activity. In MI model, rats displayed cardiac dysfunction and exercise intolerance with no signs of atrophy. However, Atrogin-1 mRNA and protein levels were increased. Therefore, alterations in Atrogin-1expression might precede atrophy and HF in this model. In conclusion, our data provide evidence for skeletal muscle anti-atrophic effect upon AET in α2A/α2C ARKO that is related, at least in part, to a reduced UPS
52

Cancer-caquexia e suplementação nutricional : impacto da dieta rica em leucina no controle do metabolismo proteico muscular

Ventrucci, Gislaine 05 May 2005 (has links)
Orientador: Maria Cristina Cintra Gomes Marcondes / Tese (doutorado) - Universidade Estadual de Campinas, Instituto de Biologia / Made available in DSpace on 2018-08-04T06:14:31Z (GMT). No. of bitstreams: 1 Ventrucci_Gislaine_D.pdf: 735812 bytes, checksum: 9ccc59181ffe68918015bc1467e83a50 (MD5) Previous issue date: 2005 / Resumo: Caquexia, presente na maioria dos hospedeiros com câncer, é um estado caracterizado pela perda involuntária de peso. Pacientes com caquexia apresentam expectativa de vida muito reduzida e menor qualidade de vida. Nos pacientes com câncer-caquexia há intensa mobilização de substratos dos tecidos da carcaça do organismo hospedeiro ocorrendo, preferencialmente, depleção de proteína muscular em função da redução da síntese e/ou aumento da degradação protéica no músculo. Este aumento da taxa de proteólise muscular tem como função prover aminoácidos para síntese de glutamina, bem como para a demanda de síntese das células neoplásicas. Trabalhos da literatura mostram que o desenvolvimento de câncer dá-se de forma mais agressiva e severa quanto mais jovem for o paciente. Pacientes acometidos pelo crescimento de neoplasia maligna concomitante à gravidez sofrem da mesma agressividade desta doença, com um agravante maior tratam se de dois pacientes: mãe e feto. Neste trabalho analisamos os efeitos de uma dieta rica em leucina sobre o metabolismo protéico em animais jovens prenhes portadores ou não do carcinossarcoma de Walker 256. Ratas Wistar foram distribuídas em grupos experimentais de acordo com a inoculação ou não do carcinossarcoma de Walker 256 e submetidas ou não a dieta rica em leucina. Após 20 dias de experimento foi realizado ensaios com o músculo esquelético (gastrocnêmio) a fim de elucidar o mecanismo de catabolismo tecidual que ocorre durante o processo de câncer-caquexia. Os grupos apresentaram aumento da taxa de proteólise muscular e redução da taxa de síntese protéica muscular. Porém, o grupo inoculado com tumor e tratado com dieta rica em leucina apresentou aumento da síntese protéica e menor espoliação de proteína muscular quando comparado com o grupo inoculado com tumor e não tratado com leucina na dieta. A suplementação de leucina na dieta, uma vez que este aminoácido é utilizado como fonte energética pelo músculo esquelético pode prevenir a depleção da carcaça, preservar a massa protéica corpórea e impedir o estado caquético do animal / Doutorado / Fisiologia / Doutor em Biologia Funcional e Molecular
53

Déterminants moléculaires de l'atrophie musculaire induite par une ischémie cérébrale chez la souris : rôle potentiel de l'inhibition de la myostatine / Molecular mechanisms of skeletal muscle atrophy in a mouse model of cerebral ischemia : potential role of myostatin inhibition

Desgeorges, Marine 30 March 2015 (has links)
Les accidents vasculaires cérébraux (AVC) sont considérés comme la pathologie neurologique la plus sévère en termes de mortalité et d’infirmité. Ils touchent plus de 140 000 personnes chaque année. L’AVC ischémique, qui représente 80% des AVC, est causé par l’occlusion localisée d’un vaisseau conduisant à un arrêt de l’apport en oxygène et en glucose au cerveau. Il est ainsi responsable de déficits moteurs, sensitifs et cognitifs qui peuvent gravement compromettre l’autonomie et la qualité de vie des patients. Les patients qui ont subi un AVC ischémique développent notamment une atrophie musculaire qui se produit principalement dans le membre parétique, mais aussi dans une moindre mesure dans le membre non parétique. Toutefois, les mécanismes moléculaires à l’origine de cette atrophie musculaire sont méconnus. Dans une première étude, l’objectif a été d’identifier les déterminants moléculaires mis en jeu dans l’atrophie musculaire induite par une ischémie cérébrale. Pour répondre à cet objectif, les travaux ont été menés sur un modèle d'ischémie cérébrale chez la souris qui consiste en l’occlusion de l'artère cérébrale moyenne par un monofilament en nylon. Nous avons montré que l’ischémie cérébrale entraînait, 3 jours après son induction, une atrophie musculaire des muscles quadriceps, soleus et tibialis anterior du côté parétique. Cette atrophie musculaire était associée à des déficits moteurs touchant l’équilibre, la coordination, la force musculaire, la posture ou la marche. Au niveau moléculaire, nous avons reporté un déséquilibre de la balance entre la synthèse et la dégradation des protéines musculaires en faveur d’une augmentation de la dégradation dans les muscles parétique et non parétique des souris ischémiées. Nous avons notamment montré que l’expression de la myostatine, un régulateur négatif majeur de la masse musculaire, était significativement augmentée. Dans une seconde étude, l’objectif a été d’identifier une cible d’intervention thérapeutique pour préserver la masse musculaire suite à une ischémie cérébrale. Au vu des résultats obtenus dans la première étude, nous avons ciblé la myostatine. Nous avons montré que l’inhibition de la myostatine entraînait, une meilleure récupération du poids de corps et du poids de divers muscles, 15 jours après une ischémie cérébrale. De plus, l’inhibition de la myostatine tendait à améliorer le comportement moteur des souris ischémiées (équilibre, coordination, force musculaire). En revanche, nous n’avons reporté aucune variation majeure des niveaux en ARNm ou protéines d’acteurs impliqués dans les voies de signalisation Akt/mTOR, Smad2/3, ubiquitine-protéasome et autophagie-lysosome, 15 jours après une ischémie cérébrale. Ces données préliminaires suggèrent que l’inhibition pharmacologique de la myostatine pourrait représenter une stratégie thérapeutique efficace pour limiter la perte de masse musculaire suite à une ischémie cérébrale / Strokes are considered as the most severe neurological disease in terms of mortality and disability. The incidence of stroke in France is estimated at 140 000. Ischemic stroke, which represents about 80% of strokes occur as a result of an obstruction of a blood vessel supplying blood to the brain. Motor, cognitive and sensory deficits are common impacts of stroke and can seriously compromise the autonomy and patient quality of life. Ischemic stroke leads to muscle atrophy, wich occurs primarily in the paretic limb, but also to a lesser extent in the nonparetic limb. However, the molecular mechanisms of muscle atrophy is unknown. In a first study, the purpose was to identify the molecular determinants involved in skeletal muscle atrophy following cerebral ischemia. To meet this objective, the work was carried out on a mouse model of cerebral ischemia, which involves the occlusion of the middle cerebral artery (MCAO) with a nylon monofilament. We have shown that cerebral ischemia leads to skeletal muscle atrophy of quadriceps, soleus and tibialis anterior muscles of the paretic side, 3 days after MCAO. This muscular atrophy was associated with motor deficits in the balance, coordination, muscle strength, posture and walking. From a molecular point of view, we reported an imbalance between the rates of synthesis and degradation of muscle protein, in favour of protein degradation in both paretic and nonparetic muscles. In particular, we showed that the expression of myostatin, a master negative regulator of skeletal muscle mass was significantly increased. In a second study, the purpose was to identify a target for therapeutic intervention in order to maintain muscle mass following cerebral ischemia. In view of the results obtained in the first study, we targeted the myostatin. Our results show that myostatin inhibition increases body weight and muscle mass recovery, 15 days after cerebral ischemia. In addition, myostatin inhibition tends to improve motor behavior (balance, coordination, strength). From a molecular point of view, we reported no major change in mRNA or protein level of actors involved in Akt/mTOR, Smad2/3, autophagy-lysosome and ubiquitin-proteasome pathways, involved in the control of muscle mass, 15 days after cerebral ischemia. These preliminary results strongly suggest that pharmacological inhibitors of myostatin may provide significant therapeutic benefit for muscle atrophy following cerebral ischemia
54

Invalidation du gène de la myostatine dans un modèle murin de cachexie associée au cancer : implication dans la régulation de la masse musculaire / Myostatin gene inactivation in a mouse model of cancer cachexia : involvement in the regulation of muscle mass

Gallot, Yann 06 November 2013 (has links)
La cachexie est un syndrome clinique et métabolique caractérisé par une perte de tissu adipeux et de tissu musculaire, fréquemment observé chez les patients atteints de cancer. La myostatine (Mstn) régule négativement la masse musculaire. Bien que la régulation des mécanismes moléculaires impliqués dans le contrôle de la masse musculaire joue un rôle central dans la cachexie associée au cancer, les relations existant entre la Mstn et les mécanismes physiopathologiques restent largement inconnues. Suite à l’inoculation de cellules Lewis lung carcinoma (LLC) à des souris, nous avons montré que l’invalidation du gène de la Mstn (souris Mstn-/-) confère une résistance au développement de la cachexie associée au cancer par rapport à des souris sauvages. La déficience en Mstn prévient la perte de masse musculaire et réduit la croissance tumorale, 35 jours après l’injection des cellules LLC, et est associée à un allongement de la durée de vie des souris. L’invalidation du gène de la Mstn provoque aussi une augmentation de l’apoptose des cellules LLC et une diminution de l'expression de gènes impliqués dans la prolifération et le métabolisme tumoraux. L’activation des systèmes protéolytiques ubiquitine-protéasome et autophagie-lysosome, due au développement tumoral, est réduite voire supprimée dans le muscle des souris Mstn-/-. L’accumulation de céramides intramusculaires, un sphingolipide formé suite à une lipolyse exacerbée, est corrélée à la perte de masse musculaire, suggérant que les céramides pourraient être un médiateur cellulaire impliqué dans la cachexie associée au cancer. Ces résultats montrent que la Mstn joue un rôle essentiel dans la cachexie associée au cancer / Cachexia is a complex clinical and metabolic syndrome, whose definition is imprecise, characterized by an uncontrolled loss of adipose tissue and skeletal muscle mass, frequently observed in cancer patients, and leading to death in 25% of cancer patients. Myostatin (Mstn) is a negative regulator of skeletal muscle mass and a critical determinant of skeletal muscle homeostasis. Although the regulation of the molecular mechanisms involved in the control of skeletal muscle mass plays a central role in the pathogenesis of cancer cachexia, the relationships between Mstn and the pathophysiological mechanisms remain largely unknown. Following subcutaneous inoculation of Lewis lung carcinoma cells (LLC) in mice, we showed that the Mstn gene inactivation (Mstn-/- mice) confers resistance to the development of cancer cachexia, compared to wild type mice. Mstn deficiency prevents the loss of skeletal muscle mass and reduces tumor growth, 35 days after the inoculation of LLC cells, and this is associated with a longer life of mice. Mstn gene inactivation also causes an increased apoptosis of LLC cells and decreases expression of genes involved in tumor proliferation and metabolism. Activation of ubiquitin-proteasome and autophagy-lysosome proteolytic systems, triggered by tumor growth is significantly reduced or suppressed in skeletal muscle of Mstn-/- mice. Accumulation of intramuscular ceramides, a sphingolipid synthesized due to excessive lipolysis, is correlated with the loss of muscle mass, suggesting that ceramides may be a cellular mediator involved in the pathogenesis of cancer cachexia. These results show that Mstn plays a critical role in the pathogenesis of cancer cachexia
55

Caracterização do repertório peptídico intracelular de células expressando o proteassomo imune. / Characterization of intracellular peptide repertoire of cells expressing the immune proteasome.

Elisabete Rodrigues do Monte Silva 18 March 2014 (has links)
Células eucarióticas contêm vários tipos de proteassomo que regulam o processo de degradação de proteína. Proteassomos são proteases multicatalíticas que são responsáveis pela maior parte de degradação não-lisossomal de proteínas em células eucarióticas. As três subunidades catalíticas do proteassomo são &beta;1, &beta;2 e &beta;5. Em condições de stress e resposta imune essas três subunidades são substituídas por &beta;1i, &beta;2i and &beta;5i, respectivamente, para formar o proteassomo imune. Estas três subunidades induzíveis, parecem alterar as especificidades de peptidase do proteassoma imune em células tratadas com IFN-<font face=\"symbol\">g. Nosso objetivo no presente trabalho foi caracterizar um modelo celular para a indução do proteassomo imune, e ainda investigar o repertório peptídeo intracelular produzido por esta forma particular do proteassoma, através da técnica de espectrometria de massas. Em resumo, os nossos dados mostraram um aumento de 3 vezes do peptídeo EL28 derivado da proteína RPT2 em células HeLa tratadas com o IFN-<font face=\"symbol\">g. O peptídeo EL28 pode ser de relevância clínica para o tratamento de distúrbios relacionados com a apresentação de antígenos, visto que ele parece ativar a atividade quimotripsina-like quando incubado com o extrato celular de células HeLa. / Eukaryotic cells contain several types of proteasome regulating the process of protein degradation. The proteasome are responsible for most non - lysosomal protein degradation in eukaryotic cells. The three catalytic subunits of the proteasome are &beta;1, &beta;2 and &beta;5. Under conditions of stress and immune response these three subunits are replaced by &beta;1i, &beta;2i and &beta;5i, respectively, to form the immune proteasome . These three inducible subunits, appear to alter the specificity of the immune proteasome peptidase in cells treated with IFN-<font face=\"symbol\">g. Our aim in this study was to characterize a cellular model for the induction of the immune proteasome, and even investigate the intracellular peptide repertoire produced by this particular form of the proteasome, through the technique of mass spectrometry. In summary, our data showed an increase of 3 times the peptide derived from RPT2 EL28 protein in HeLa cells treated with IFN-<font face=\"symbol\">g. The EL28 peptide may be of clinical relevance for the treatment of disorders related to antigen presentation, since it seems to activate the chymotrypsin-like activity when incubated with the cell extract of HeLa cells.
56

Caracterização de putativo receptor serpentino e estudos sobre a implicação do sistema de ubiquitina/proteossomo na modulação do ciclo celular de Plasmodium falciparum. / Caracterization of serpentine receptor putative and studies about the implication of ubiquitin/proteasome system in Plasmodium falciparum cell cycle.

Fernanda Christtanini Koyama 28 May 2012 (has links)
É proposto que vias de sinalização controlem a sobrevivência e adaptação do Plasmodium, nos diferentes hospedeiros. No presente trabalho buscamos por diferentes abordagens estudar a via de sinalização de melatonina em P. falciparum. Para isso, avaliamos os níveis de RNA mensageiro de genes do sistema-ubiquitina proteossomo (UPS) bem como o perfil de ubiquitinação resultante do tratamento de parasitas com melatonina. Mostramos que a proteína quinase 7 de P. falciparum (PfPK7) atua na modulação dos genes do UPS em resposta a melatonina. Avaliamos também se o parasita é responsivo ao ácido indol-3-acético (AIA). Sabendo-se da importância de receptores de membrana na regulação de diversas funções celulares incluindo a percepção do meio externo, buscamos caracterizar um receptor serpentino putativo identificado previamente pelo grupo. Pudemos concluir que a via de sinalização por melatonina em P. falciparum envolve a participação da PfPK7, uma vez que em parasitas nocautes para pfpk7 são irresponsivos à melatonina quando comparados ao parental. / It is proposed that signaling pathways can control the parasite survival and adaptation into the hosts. In the present work we inquire about to study the melatonin signaling pathway trhough different metodologies. For this purpose we have analized post-translational modification of melatonin signaling, through ubiquitin-proteasome system (UPS) mRNA levels as well as the profile of ubiquitination resulted of melatonin treatment when compared with control. Moreover, we have found here that the P. falciparum protein kinase 7 (PfPK7) plays a major role in ubiquitin-proteasome system mRNA modulation in response to melatonin since parasites knockout to pfpk7 gene do not upregulate the UPS genes in response to melatonin. As for melatonin we have evaluated if P. falciparum parasites were responsive to indoleacetic acid. Last but not least, we made an effort to characterize a putative serpentine receptor previously identified by our group. We conclude that melatonin signaling pathway involves PK7 participation since pfpk- parasites are irresponsives to melatonin.
57

Hledání biologické role rodiny proteinů podobných Ddi1 / Deciphering the biological role of Ddi1-like protein family

Sivá, Monika January 2019 (has links)
Ddi1-like protein family has been recently raised into the spotlight by the scientific community due to its important roles in cellular homeostasis maintenance. It represents a specific group among shuttling proteins of the ubiquitin-proteasome system. When compared to other shuttles, Ddi1-like protein family members harbor a unique retroviral-protease like domain besides the conventional ubiquitin-like (UBL) domain and domains interacting with ubiquitin. In addition, a helical domain of Ddi (HDD) has been recently found in most of the orthologs. In this thesis, I focus on characterization of several members of Ddi1-like protein family, both on molecular level using NMR and in model mouse strains via a variety of biological methods. Solution structure of the UBL domain of Ddi1p of S. cerevisiae was solved and its characteristics were compared to those of the UBL domain of its human ortholog. Furthermore, we show that human DDI2 specifically binds to ubiquitin with its terminal domains, both the UBL and the UIM; however, with very low affinity in contrast to binding properties of its yeast counterpart. Our study also show that hDDI2 does not form a head-to-tail homodimer. Based on our structural studies, we hypothesize that human DDI2 might have evolved a different function compared to its yeast...
58

Role of 26S Proteasome and Regulator of G-Protein Signaling 10 in Regulating Neuroinflammation in the Central Nervous System

Maganti, Nagini 17 December 2015 (has links)
Major histocompatibility complex molecules (MHCII) are cell surface glycoproteins that present extracellular antigens to CD4+ T lymphocytes and initiate adaptive immune responses. Apart from their protective role, overexpression of MHCII contributes to autoimmune disorders where the immune system attacks our own tissues. Autoimmune diseases are characterized by self-reactive responses to autoantigens, promoting tissue damage, inflammation mediated by proinflammatory cytokines, autoreactive lymphocytes, and autoantibodies. MHCII molecules are tightly regulated at the level of transcription by Class II transactivator (CIITA). CIITA associates with an enhanceosome complex at MHCII promoters and regulates the expression of MHCII. It is thus crucial to understand the regulation of CIITA expression in order to regulate MHCII in autoimmune diseases. Our lab has shown that the 19S ATPases of the 26S proteasome associate with MHCII and CIITA promoters and play important roles in gene transcription, regulate covalent modifications to histones, and are involved in the assembly of activator complexes in mammalian cells. The mechanisms by which the proteasome influences transcription remain unclear. Here, we define novel roles of the 19S ATPases Sug1, S7, and S6a in expression of CIITApIV genes. These ATPases are recruited to CIITApIV promoters and coding regions, interact with the elongation factor PTEFb, and with Ser5 phosphorylated RNA Pol II. Both the generation of CIITApIV transcripts and efficient recruitment of RNA Pol II to CIITApIV are negatively impacted by knockdown of 19S ATPases. Alternatively, inflammation is also suppressed via the Regulator of G-protein signaling 10 (RGS10) in microglial cells which express high levels of RGS10 and promote homeostasis in the central nervous system. However, chronic activation of microglial cells leads to release of cytokines which cause neuroinflammation. Our investigation of roles played by RGS10 in chronically activated microglial cells indicates that RGS10 binds to promoters of IL-1β, and TNF-α and regulates these genes, while the molecular mechanism remains to be investigated. Together, our observations indicate roles for the UPS in modulating gene expression and for RGS10 in regulating proinflammatory cytokines in microglial cells, each of which provides novel therapeutic targets to combat inflammation in autoimmune and neurodegenerative diseases.
59

L’immunoprotéasome : régulateur de transcription et promoteur de survie cellulaire

Rouette, Alexandre 04 1900 (has links)
Le protéasome (CP) contrôle la majorité des fonctions cellulaires par la dégradation des protéines intracellulaires. En plus d’exprimer le CP, les vertébrés expriment également l’immunoprotéasome (IP), caractérisé par des préférences de dégradation distinctes. Le rôle le mieux caractérisé pour l’IP est la génération d’antigènes adaptés pour la liaison au complexe majeur d’histocomptabilité de classe I (CMH-I). Cependant, les nombreux phénotypes observés au niveau de cellules déficientes en IP ou avec une mutation révèlent que l’IP influence des fonctions immunitaires indépendamment de la génération d’antigènes et peut atténuer le stress présent au niveau de cellules non-immunitaires. L’objectif de cette thèse était de caractériser les rôles de l’IP qui ne sont pas reliés à la génération d’antigènes associés au CMH-I. L’analyse du transcriptome de cellules dendritiques IP-déficientes en cours de maturation révèle que l’IP affecte l’expression de plus de 8 000 transcrits. L’IP affecte l’expression génique principalement au niveau transcriptionnel en contrôlant l’abondance de régulateurs de transcriptions tels que NF-κB et les membres des familles IRF et STAT. Les cellules dendritiques IP-déficientes sont également moins efficaces pour activer des lymphocytes T CD8+, même chargées artificiellement avec des quantités optimales d’antigènes associés au CMH-I. En outre, nos études montrent que l’IP est fortement exprimé au niveau de cellules de patients atteints de leucémie myéloïde aigue. L’expression de l’IP est intrinsèque aux leucémies, puisque qu’elle n’est pas corrélée à la présence de lymphocytes sécréteurs d’IFN-γ. De plus, l’expression d’IP est particulièrement élevée au niveau de leucémies monocytaires et/ou possédant un réarrangement MLL. Notamment, des analyses de corrélation montrent que l’IP est connecté à des gènes impliqués dans le métabolisme, l’activité mitochondriale et la réponse au stress. En effet l’inhibition de la sous-unité PSMB8 de l’IP mène à l’accumulation de protéines ubiquitinées et la mort de cellules leucémiques monocytaires. Globalement, nos travaux montrent que le rôle de l’IP n’est pas limité à la génération d’antigènes, mais qu’il peut contrôler l’expression génique et la survie des leucémies. / By regulating protein degradation, constitutive proteasomes (CP) control practically all cellular functions. In addition to CP, vertebrates express immunoproteasomes (IP), which display distinct substrate preferences. The first non-redundant role ascribed to IP is its enhanced ability to generate MHC I-associated antigens. However, deletion or inhibition of IP subunits can affect several immune cell functions independently of MHC-I antigen generation. Moreover, recent work has shown that IP can be expressed in non-immune cells to deal with cell stress. Thus, we wished to investigate the roles of IP that are not related to antigen generation and that are not redundant with the CP. Based on profiling of WT and IP-deficient maturing mouse dendritic cells (DCs), we report that IP regulate the expression of more than 8,000 transcripts. The broad impact of IP on gene expression is cell-autonomous, mediated mainly at the transcriptional level, and involves major signaling pathways including IRFs, NF-kB and STATs. Moreover, even when engineered to present optimal amounts of antigenic peptides, IP-deficient DCs are inefficient for in vivo T-cell priming. In addition, consistent with the fact that cancer cells endure proteotoxic stress, we report that acute myeloid leukemia (AML) cells from patients express high levels of IP genes. Expression of IP genes in AML is a cell-autonomous and IFN-independent feature that correlates with the methylation status of IP genes, and is particularly high in AML with a monocytic phenotype and/or MLL rearrangement. Notably, IP inhibition leads to accumulation of polyubiquitinated proteins and cell death in IPhigh but not IPlow AML cells. Co-clustering analysis reveals that genes correlated with IP subunits in monocytic AMLs are primarily implicated in cell metabolism and proliferation, mitochondrial activity and stress responses. Overall, our studies show that the role of IP is not limited to antigen processing and reveals major non-redundant roles for IP in transcription regulation and resistance to cell stress in AML.
60

L’immunoprotéasome : producteur de peptides-CMH I et régulateur de l’expression génique

de Verteuil, Danielle Angeline 01 1900 (has links)
Le système ubiquitine-protéasome est le principal mécanisme par lequel les protéines intracellulaires sont dégradées. Le protéasome dit constitutif (PC) est donc essentiel à l’homéostasie mais aussi à la régulation de la majorité des processus cellulaires importants. La découverte d’un deuxième type de protéasome, appelé immunoprotéasome (IP), soulève toutefois de nouvelles questions. Pourquoi existe-t-il plus d’un type de protéasome ? L’IP a-t-il des rôles redondants ou complémentaires avec le PC ? L’IP étant présent principalement dans les cellules immunitaires ou stimulées par des cytokines, plusieurs groupes ont tenté de définir son rôle dans la réponse immunitaire. Or, l’implication de son homologue constitutif dans un éventail de processus non spécifiquement immunitaires nous laisse croire que l’IP pourrait lui aussi avoir un impact beaucoup plus large. L’objectif de cette thèse était donc de caractériser certains rôles cellulaires de l’IP dans les cellules dendritiques. Nous avons d’abord étudié l’impact global de l’IP sur la présentation antigénique de classe I. Ce faisant, nous avons pu déterminer ses deux contributions principales, soit l’augmentation drastique du nombre et de la diversité des peptides présentés sur les complexes majeurs d’histocompatibilité de classe I. Les différences de clivage entre le PC et l’IP pourraient expliquer en partie cette diversité du répertoire peptidique, notamment par l’affinité apparente de l’IP pour les régions protéiques non structurées. Dans un deuxième temps, nous avons dévoilé un nouveau rôle de l’IP sur un processus dépassant le cadre immunitaire : la transcription. Nous avons découvert que l’IP modifie l’abondance des ARNm en agissant principalement au niveau de leur synthèse. L’impact de l’IP sur le transcriptome est majeur et serait dû en partie à une dégradation différente de facteurs de transcription des familles IRF, STAT et NF-kB. Les cellules dendritiques IP-déficientes activent moins efficacement les lymphocytes T CD8+ et nous croyons que cette défaillance est causée (du moins en partie) par la perturbation transcriptomique provoquée par l’absence d’IP. Il importe donc de comprendre les différents rôles moléculaires de l’IP afin de mieux définir sa contribution globale au fonctionnement de la cellule et comprendre l’avantage évolutif, au niveau de l’organisme, procuré par une telle plasticité du système ubiquitine-protéasome. / The ubiquitin-proteasome system is the major mechanism by which intracellular proteins get degraded. Constitutive proteasomes (CPs) are thus essential for cellular homeostasis but also to regulate the majority of important cellular processes. However, the discovery of a second type of proteasome, named immunoproteasome (IP), raises new questions. Why are there more than one type of proteasome? Does the IP perform redundant or complementary roles with the CP? The IP is predominantly expressed in immune or cytokine-stimulated cells and several groups worked at defining its role during the immune response. Yet, the implication of its constitutive homolog in a variety of processes suggests that the IP may also have a much broader impact. The objective was to characterize cellular roles of the IP in dendritic cells. We first studied the global impact of the IP on class I antigen presentation. We discovered that the IP drastically increases the number and the diversity of peptide presented by class I major histocompatibility complexes. Cleavage differences between the CP and the IP are likely part of the explanation for this peptide repertoire diversity, notably due to IP’s apparent affinity for unstructured protein regions. Second, we discovered a new role for the IP in a process unrestricted to the immune system: transcription. We found that the IP affects transcript abundance mostly at the level of mRNA synthesis. The impact of IPs on the transcriptome is major and would be partly based on a different degradation of IRF, STAT and NF-kB transcription factor family members by the two types of proteasomes. IP-deficient dendritic cells are less potent activators of CD8+ T cells and we believe that this defect is at least partly caused by the transcriptome alterations induced by the absence of IPs. It is therefore important to understand the different molecular roles of the IP in order to better define its global contribution to cellular functions and to understand the evolutionary advantage, at the level of the organism, brought by such plasticity of the ubiquitin- proteasome system.

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