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Role of fungal ARV-1 protein in sterol metabolism and pathogenicity of the chestnut blight fungus Cryphonectria parasiticaKundu, Soumyadip 12 May 2023 (has links) (PDF)
Intracellular sterol redistribution is an important step in the lipid homeostasis of organisms, a process directly linked to the organizational arrangement in the plasma membrane (PM) of cells. Previous studies in the budding yeast Saccharomyces cerevisiae have demonstrated that the ARV1 (ACAT-related enzyme-2 required for viability 1) protein is a major regulator of sterol transport from the endoplasmic reticulum to the plasma membrane, contributing to the structural organization of the PM, rendering it resistant to anti-fungal compounds as well as maintaining ER integrity. This study assessed the significance of ARV1 in the plant pathogenic fungus Cryphonectria parasitica (Cparv1) and investigated its role in the pathogenesis and virulence of the fungus. C. parasitica is the causative agent of Chestnut blight, which has wreaked havoc on the American chestnut species. Genomic analysis revealed that the Cparv1 gene is very closely linked to another gene that putatively encodes a cyanamide hydratase (Cpcah). An initial gene deletion event resulted in the elimination of both genes and a highly deformed phenotype in C. parasitica that was fully recoverable by complementation. PCR-based expression analysis determined that the lack of Cparv1 was responsible for the debilitated phenotype of the double mutant, with no transcript detectable from Cpcah. Subsequent complementation of the Cparv1 gene was also observed to restore the wildtype phenotype. Mass spectrometry-based (MS) results indicated a decrease in sterol content of the DCparv1 mutant strain compared to wildtype EP155 thus confirming a role for Cparv1 in sterol homeostasis. It has been shown that infection of C. parasitica with virulence-attenuating hypoviruses altered intracellular lipid content and protein secretion. Ultrastructure studies conducted on the Cparv1 strain showed disrupted organelle integrity and the presence of cytoplasmic double membrane stretches. Decreased sterol content in C. parasitica infected with CHV1-EP713 was observed similar to DCparv1 suggesting a connection between the hypovirus-infected phenotype and Cparv1. Furthermore, a non-targeted metabolomic study on all three strains identified 324 metabolites. Through the subsequent pathway analysis, we have investigated the pleiotropic effects in the C. parasitica strains and established a mechanistic linkage between this the activity of the ARV-1 protein and the hypovirus-infected phenotype.
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The fungal communities associated with Red-cockaded Woodpeckers and their excavations: descriptive and experimental evidence of symbiosisJusino, Michelle Alice 29 July 2014 (has links)
Cavity-excavating birds, such as woodpeckers, are ecosystem engineers and are often assumed to rely upon wood decay fungi to assist in softening the wood of potential excavation sites. Endangered red-cockaded woodpeckers (Picoides borealis; RCWs) are the only birds known to solely excavate through the sapwood and into the heartwood of living pine trees and generally take many years to complete their excavations. These birds may have developed a partnership with wood-inhabiting fungi to facilitate the excavation process. Past attempts to understand the complex relationships between cavity excavators and fungi relied on visual surveys of fruiting bodies, or evidence of decay, resulting in a one bird, one fungus paradigm. Using molecular methods, I investigated the relationships between RCWs and fungi, and found that the relationships between cavity-excavators and fungi involve multiple fungal species and are far more complex than previously imagined. Through a field survey, I showed that RCW excavations contain distinct communities of fungi, and propose two hypotheses to explain this result, (1) RCWs select trees with distinct fungal communities (tree selection hypothesis), or (2) RCWs promote distinct fungal communities via their excavations (bird facilitation hypothesis). By swabbing the birds, I found that RCWs carry fungal communities similar to those found in their completed excavations, demonstrating that RCWs may directly facilitate fungal dispersal during the excavation process. Through a test of the bird introduction hypothesis which implemented human-made experimental drilled cavity starts (incomplete excavations), half of which were inaccessible to the birds, I showed that RCW accessibility influences fungal community development in excavations. This experimental evidence demonstrates that the relationship between RCWs and fungal communities is a multipartite symbiosis may be mutualistic. Finally, by tracking fungal community development in experimental cavity starts through time, I also demonstrated that the fungal communities found in RCW excavations undergo succession, and that this process is influenced by the birds. The relationships described in this body of work provide the basis for future studies on cavity excavators and fungi, and also have implications for a diverse community of secondary cavity nesters, wood-inhabiting fungi, forest ecology, and the conservation of biodiversity. / Ph. D.
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Aspects of arbuscular mycorrhizal (AM) fungal ecology : AM fungal nutrient-function efficiency in a primary sand-dune ecosystem on the west coast of IndiaWillis, A. E. January 2013 (has links)
Arbuscular mycorrhizal (AM) fungi are root and soil inhabiting symbionts with higher plants. The fungi are especially nutrient-function efficient in nutrient deficient soils. There have been innumerable studies of AM fungal facilitation of plant nutrient uptake in controlled environments. Comparatively little similar investigation has been undertaken in natural soils, including investigation of taxon specific nutrient-function efficiency in the phylum. Plant diversity and frequency, soil chemistry statuses, and AM spore diversity and abundance were sampled in an interrupted-belt transect in an aggrading dune sytem on west-coast India, followed by foredunes and transect nutrient amendment experiments in selected plant species. The transect extends 175 m inland from mean high-water mark (MH-WM). Examination showed nutrients were consistently deficient. A plant zonation pattern and increasing frequency over the transect were indicated, as well as decreasing pH and increasing organic matter (OM)-amendment AM species diversity gradients. Plant zonation does not correlate with soil chemistry. There was a distinct soil transition at the 175 m point and evidence of further system partition between foredune and behind-foredune regions. Plant and AM demographies bore no resemblance suggesting neither is driven by the other. Four AM genera were recovered, Acaulospora, Gigaspora and Scutellospora in high abundance, Glomus in comparatively low abundance. The two co-dominant species, A. spinosa and Gi. margarita, displayed divergent strategies in OM amendment. Certain AM taxa may be functionally associated with particular soil nutrients. There was no evidence of taxon-specific nutrient-function efficiency.
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Funkcionalne karakteristike fermentisanog čajnog napitka obogaćenog CoffeBerry®-jem / Functional characteristics of the fermented tea beverage enriched with CoffeBerry®Ahmed Essawet Najmi 30 September 2016 (has links)
<p>Cilj ispitivanja čiji su rezultati prikazani u ovoj doktorskoj disertaciji bio<br />je da se ispita mogućnost dobijanja kombuha napitka od/sa CoffeeBerry®<br />ekstraktom i da se ispitaju njegove funkcionalne karakteristike.<br />CoffeeBerry® ekstrakt kao bogat izvor biološki aktivnih jedinjenja bi<br />obezbedio dodatne funkcionalne karakteristike kombuha napitku u<br />poređenju sa onim pripremljenim na tradicionalan način od zaslađenog<br />crnog čaja. U disertaciji je nakon optimizacije sastava podloge za<br />kultivaciju čajne gljive ispitana (in vitro) antioksidativna, antimikrobna i<br />citotoksična aktivnost kombuhe/fermentacione tečnosti obogaćene<br />CoffeeBerry® ekstraktom. Antioksidativna aktivnost je ispitana ESR<br />(elektron-spin rezonantnom) spektroskopijom na reaktivne hidroksil i<br />stabilne DPPH (1,1-difenil-2-pikrilhidrazil) radikale, kao i kvalitativni i<br />kvantitativni sastav fenolnih jedinjenja, potencijalnih nosilaca biološke<br />aktivnosti (HPLC metodom). Antimikrobna aktivnost je ispitana agardifuzionom<br />metodom na odabrane referentne i izolovane („divlje“)<br />sojeve bakterija (Gram-pozitivnih i Gram-negativnih) i kvasaca.<br />Citotoksična aktivnost uzoraka na rast odabranih ćelijskih linija: Hep2c<br />(Human larynx carcinom), RD (Rhabdomyosarcoma) i L2OB (mišija<br />tumorska fibrolastna linija u koju su transfektovani neki humani geni)<br />ispitana je MTT testom. U navedenim ispitivanjima je tradicionalna<br />kombuha dobijena od zaslađenog crnog čaja korišćena kao kontrolni<br />uzorak. Rezultati su pokazali da CoffeeBerry® ekstrakt značajno<br />doprinosi antioksidativnoj i citotoksičnoj aktivnosti napitka što govori o<br />punoj opravdanosti upotrebe ovog ekstrakta kao funkcionalnog dodatka<br />podlozi za kultivaciju čajne gljive. Kombuha napici od crnog čaja i sa<br />dodatkom CoffeeBerry® ekstrakta pokazali su približno isto delovanje na<br />bakterijske sojeve, dok je delovanje na kvasce izostalo u potpunosti.<br />Primarni nosilac antibakterijske aktivnosti napitaka je sirćetna kiselina.</p> / <p>The aim of this study was to investigate fermentation of sweetened<br />medium prepared with CoffeeBerry® еxtract and functional<br />characteristics of a kombucha beverage enriched with CoffeeBerry®<br />еxtract. Total phenol concentration in unfermented samples,<br />fermentation broths and kombucha beverages made of CoffeeBerry®<br />еxtract and black tea was determined spectrophotometrically whereas<br />qualitative and quantitative concentration of polyphenolic compounds<br />was determined by HPLC method. Antioxidant activity on DPPH and<br />hydroxyl radicals in the same samples was determined on an ESR<br />spectrometer. Fermentation broth and kombucha beverage enriched with<br />CoffeeBerry® еxtract had higher antioxidant activity against both<br />radicals than control samples. Antimicrobial activity of kombucha<br />beverages optimal acidity was tested against selected strains of bacteria<br />(Gram-positive and Gram-negative) and yeast. The main active<br />component of antibacterial activity was acetic acid, but samples did not<br />show any activity against yeast Candida albicans and Saccharomyces<br />cerevisiae. Antiproliferative activity of fermentation broth with and<br />without CoffeeBerry® еxtract was measured by MTT test on following<br />cell lines: Hep2c (Human larynx carcinom), RD (Rhabdomyosarcoma) i<br />L2OB (murine tumor fibrolast lines trаnsfеcted by some human genes).<br />The highest antiproliferative activity shown fermentation broth enriched<br />with CoffeeBerry® еxtract, wherein Hep2c cells was the most<br />susceptible.</p>
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Effects of entomopathogenic fungi used as plant inoculants on plant growth and pest control / Efeitos da utilização de fungos entomopatogênicos como inoculantes no crescimento de plantas e controle de pragasCanassa, Fernanda 29 April 2019 (has links)
Entomopathogenic fungi (EPF) of the genera Metarhizium and Beauveria are able to endophytically colonize a wide variety of plant species, providing protection against arthropod pests; besides increasing the plant development; and act as phytopathogen antagonists. The main objective of the present project was to evaluate the potential of entomopathogenic fungi as plant inoculants against the two-spotted spider mite Tetranychus urticae and the effects on plant growth promotion. Tritrophic effects were also studied, by evaluating prey consumption and feeding behavior of the predatory mite Phytoseiulus persimilis. The evaluated strategy has several potential benefits compared to the sole use of EPF as contact biocontrol agents, as it may control both pests and phytopathogens; be compatible with other natural enemies; provide limited exposure of fungal propagules to adverse environmental conditions, and accelerate seed emergence and plant growth. Considering this, the effects of seed inoculation using two isolates of Metarhizium robertsii and Beauveria bassiana were evaluated at University of Copenhagen, Denmark, on plant development (i.e. biomass and yield) and T. urticae population growth in a model system with bean plants under greenhouse conditions. Effects on feeding performance of P. persimilis were also studied in laboratory conditions. In Brazil, inoculation studies with EPF were conducted at ESALQ/USP with strawberry plants in greenhouse conditions and in the field in four commercial production areas of strawberries in Atibaia-SP and Senador Amaral-MG. In greenhouse studies, the effects of 15 isolates of Metarhizium spp., 5 isolates of B. bassiana and 5 of Cordyceps (= Isaria) fumosorosea were studied, whereas in the commercial area one isolate of Metarhizium and Beauveria was used. Strawberry roots were inoculated by submersion in fungal suspensions, and the population growth of spider mites, while plants development was assessed by measuring root lengths, biomass of roots and leaves, and the strawberry fruit weight. The results showed a significant reduction in T. urticae population and in general better plant development in both crops. The production of string beans and strawberry fruits were higher in inoculated plants than in non-inoculated plants. There was no difference in predation rate and feeding behavior of the predator mite P. persimilis towards T. urticae from fungal inoculated and uninoculated plants. In the commercial strawberry production areas there were significantly lower populations of T. urticae and fewer symptoms of plant diseases on plants in the fungal treated beds compared to plants in untreated beds. The results of this project bring a new perspective on the use of Metarhizium and Beauveria as plant protecting agents revealing that the use of entomopathogenic fungi as plant inoculants may be a promising strategy. / Fungos entomopatogênicos dos gêneros Metarhizium e Beauveria são capazes de colonizar endofiticamente uma ampla variedade de espécies de plantas e conferir à estas, proteção contra artrópodes pragas; além de acelerar o seu desenvolvimento; e atuar como antagonistas de fitopatógenos. O objetivo geral deste projeto foi avaliar o potencial de fungos entomopatogênicos como inoculantes contra o ácaro rajado Tetranychus urticae e seus efeitos na promoção de crescimento de plantas. O efeito tri-trófico no consumo e comportamento alimentar do ácaro predador Phytoseiulus persimilis também foi estudado. A estratégia avaliada traz vários potenciais benefícios comparado ao uso exclusivo de fungos entomopatogênicos como agentes de controle biológico de contato, como o controle duplo de pragas e fitopatógenos; compatibilidade com outros inimigos naturais; menor exposição de propágulos às condições ambientais adversas, além de acelerar a emergência de sementes e o crescimento de plantas. Diante disso, os efeitos da inoculação de sementes usando dois isolados de Metarhizium robertsii e Beauveria bassiana foram avaliados na Universidade de Copenhagen, Dinamarca, na promoção de crescimento das plantas (biomassa e produção) e no crescimento populacional de T. urticae em um sistema modelo com plantas de feijão em casa-de-vegetação. Efeitos no comportamento alimentar de P. persimilis foram também estudados em condições de laboratório. No Brasil, estudos foram conduzidos na ESALQ/USP com plantas de morangueiro em casa-de-vegetação e em quatro áreas de produção comercial de morangueiro em Atibaia-SP e Senador Amaral-MG. Nos estudos em casa-de-vegetação, os efeitos de 15 isolados de Metarhizium spp., 5 de B. bassiana e 5 de Cordyceps (= Isaria) fumosorosea foram estudados, enquanto em área comercial um isolado de Metarhizium e Beauveria foram utilizados. Raízes de morangueiro foram inoculadas por imersão em suspensões fúngicas, e foram avaliados o crescimento populacional do ácaro rajado e o desenvolvimento das plantas, quantificando o comprimento de raiz, biomassa de raiz e de parte aérea, e massa de frutos de morango. Os resultados mostraram redução significativa na população de T. urticae e em geral melhor desenvolvimento das plantas nas duas culturas. A produção de vagens em plantas de feijão e de frutos de morango foram superiores nas plantas inoculadas em relação às não inoculadas. Não se observou diferenças na taxa de predação e comportamento alimentar do ácaro predador P. persimilis quando oferecidos T. urticae provenientes de plantas inoculadas e não inoculadas. Em campo foram observadas populações significativamente menores de T. urticae e menos sintomas de doenças nas plantas inoculadas com os fungos, comparado às plantas não inoculadas. Os resultados obtidos por este projeto trazem uma nova perspectiva do uso de Metarhizium e Beauveria como agentes protetores de plantas revelando que a utilização de fungos entomopatogênicos como inoculantes pode ser uma estratégia promissora.
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Produtos naturais antiffúngicos e antileishmania a partir de Actinobacterias associadas a formigas cultivadoras de fungos do Brasil / Antifungal and Antileishmanial Natural Products from Actinobacteria Associated to Brazilian Fungus-Growing AntsDominguez, Humberto Enrique Ortega 10 December 2018 (has links)
Há uma simbiose quadripartida no ecossistema das formigas cultivadoras de fungos entre três mutualistas (Formiga da tribo Attini, jardim fúngico e actinomicetos simbiontes) e um parasita (fungo patogênico especializado Escovopsis sp). As actinobactérias associadas à formiga hospedeira produzem metabólitos secundários para inibir este patógeno, mas não o fungo mutualista. Produtos naturais interessantes foram relatados a partir destas bactérias com um amplo espectro de atividades biológicas. Portanto, várias actinobactérias foram isoladas do exoesqueleto e do jardim das formigas agricultoras para isolar compostos ativos contra diferentes alvos como Leishmania donovani e Escovopsis. Os antibióticos e compostos citotóxicos conhecidos griseorhodina A (1), griseorhodina C (2), griseorhodina G (3) e a dinactina (4) foram produzidos em cultivo sólido de ISP-2 por Streptomyces puniceus AB10, que foi isolada da formiga cortadeira Acromyrmex rugosus rugosus. As configurações absolutas de 1 e 2 foram inequivocamente estabelecidas como 6S,6aS,7S,8S e 6R,6aS,7S,8R, respectivamente, usando dicroísmo circular vibracional (VCD) e cálculos da Teoria do Funcional de Densidade (DFT). A bactéria Streptomyces puniceus AB10 produziu em meio-A líquido apenas uma familia de antibióticos como a dinactina (4). O composto 4 mostrou inibição contra Escovopsis e uma atividade maior contra L. donovani em promastigota e amastigota intracelular que a miltefosina. Dois estereoisômeros, strepchazolina A (5) e strepchazolina B (6), os antibióticos streptazolina (7), seu isômero-E (8), e o composto inorgânico octa-enxofre (9) foram produzidos em cultivo sólido de ISP-2 por Streptomyces chartreusis AC70, que foi isolada do jardim fúngico da formiga cortadeira Acromyrmex subterraneus brunneus. O composto 9 mostrou atividade antagonista contra o fungo patogênico especializado Escovopsis sp. Este é o primeiro relato de 8 como produto natural. As configurações absolutas de 5 e 6 foram inequivocamente estabelecida como 5S,6S,9R e 5S,6S,9S, respectivamente, usando dicroísmo circular vibracional (VCD) e cálculos da Teoria do Funcional de Densidade (DFT). A bactéria Candidatus Streptomyces philanthi ICBG292, isolada do exoesqueleto de operária de colônia de formiga Cyphomyrmex, produziu os antibióticos Mer-A2026B (10), piericidina-A1 (11) e nigericina (12). Os compostos 10-12 mostraram atividade contra Escovopsis sp e contra L. donovani. O composto 12 mostrou uma atividade maior contra L. donovani em promastigota e amastigota intracelular que a miltefosina. O composto 10 também foi ativo contra o fungo Trichoderma sp. Streptomyces sioyaensis ICBG311, isolada de machos alados de colônia de formiga Cyphomyrmex, produziu uma nova naftoquinona chamada cyphoquinona (13), dois novos compostos antifúngicos denominados cyphomycina (14) e epoxicyphomycina (15), e o antifúngico conhecido GT-35 (16). Os compostos 14-16 mostraram atividade contra diferentes linhagens de Escovopsis sp e Candida albicans K1 com MIC de 1.0, 0.5 e 0.25 ?g/mL, e uma atividade maior contra L. donovani em promastigota e amastigota intracelular que a miltefosina, enquanto 13 apresentou atividade baixa contra L. donovani. A cyphomycina (14) também mostrou uma potente atividade in vitro contra os patógenos humanos resistentes Aspergillus fumigatus 11628 (resistente à equinocandina), C. glabrata 4720 (resistente ao triazol), e C. auris B11211 (resistente à echinocandina, ao triazol, e à anfotericina B), com MIC de 0.5, 0.5 e 4 ?g/mL, respectivamente. Um estudo de dose única de cyphomycina (14) no modelo de camundongos neutropênicos de candidíase disseminada exibiu uma dose-resposta iv com um log de redução de 0.56 e 0.66 do carga infecciosa quando é tratado com 20 e 40 mg/kg da cyphomycina (14), respectivamente, e epoxicyphomycina (15) exibiu um log de redução de 0.53 com 40 mg/kg, demonstrando relevância clínica e eficácia de 14 e 15 neste modelo padrão da indústria de infecção por Candida. Por outro lado, GT-35 (16) matou os ratos 1 hora após a dose de 40 mg/kg. / There is a quadripartite symbiosis in the fungus-growing ant ecosystem between three mutualist (Attine ant, fungal garden and symbiotic actinomycetes) and one parasite (specialized pathogenic fungus Escovopsis sp). The actinobacteria associated to the ant host produce secondary metabolites to inhibit this pathogen but not the crop fungus. Interesting natural products have been reported from these bacteria with a wide spectrum of biological activities. In this thesis, several actinobacteria were isolated from the exoskeleton and garden of fungus-growing ants to isolate active compounds against different targets such as Leishmania donovani and Escovopsis. The known antibiotic and cytotoxic compounds griseorhodin A (1), griseorhodin C (2), griseorhodin G (3) and dinactin (4) were produced in solid ISP-2 culture by Streptomyces puniceus AB10, which was isolated from the leaf-cutter ant Acromyrmex rugosus rugosus. The absolute configurations of 1 and 2 were unambiguously established as 6S,6aS,7S,8S and 6R,6aS,7S,8R, respectively, using vibrational circular dichroism (VCD) and density functional theory (DFT) calculations. The bacterium Streptomyces puniceus AB10 produced in broth A-medium only one family of antibiotics as dinactin (4). Compound 4 showed inhibition against Escovopsis and a higher activity against L. donovani promastigotes and intracellular amastigotes than miltefosine. Two stereoisomers strepchazolin A (5) and strepchazolin B (6), the antibiotic streptazolin (7), its E-isomer (8), and the inorganic compound cyclooctasulfur (9) were produced in solid ISP-2 culture by Streptomyces chartreusis AC70, which was isolated from the fungal garden of the leaf-cutter ant Acromyrmex subterraneus brunneus. Compound 9 showed antagonist activity against the specialized pathogenic fungus Escovopsis sp. This is the first report of 8 as natural product. The absolute configurations of 5 and 6 were unambiguously established as 5S,6S,9R and 5S,6S,9S, respectively, using vibrational circular dichroism (VCD) and density functional theory (DFT) calculations. The bacterium Candidatus Streptomyces philanthi ICBG292, isolated from the exoskeleton of a worker of a Cyphomyrmex colony, produced the antibiotics Mer-A2026B (10), piericidin-A1 (11) and nigericin (12). Compounds 10-12 showed activity against Escovopsis sp and against L. donovani. Compound 12 showed higher activity against L. donovani promastigotes and intracellular amastigotes than miltefosine. Compound 10 was also active against the fungus Trichoderma sp. Streptomyces sioyaensis ICBG311, isolated from winged male ants of Cyphomyrmex colonies, produced a new naphtoquinone named cyphoquinone (13), two new antifungal compounds named cyphomycin (14) and epoxycyphomycin (15), and the known antifungal GT-35 (16). Compounds 14-16 displayed activity against several strains of Escovopsis sp and Candida albicans K1 with a MIC of 1.0, 0.5 and 0.25 ?g/mL, and a higher activity against L. donovani promastigotes and intracellular amastigotes than miltefosine, while 13 a weak activity against L. donovani. Cyphomycin (14) also showed potent in vitro activity against the resistant human pathogens Aspergillus fumigatus 11628 (echinocandin resistance), C. glabrata 4720 (triazole resistance), and C. auris B11211 (echinocandin, triazole, and amphotericin B resistance), with MIC of 0.5, 0.5 and 4 ?g/mL, respectively. A single-dose study of cyphomycin (14) in a neutropenic mouse disseminated candidiasis model exhibited a dose-like response with 0.56 and 0.66 log reduction of infectious burden when treated with 20 and 40 mg/kg cyphomycin (14), respectively, and epoxycyphomycin (15) exhibited 0.53 log ii reduction with 40 mg/kg, demonstrating clinical relevance and effectiveness of 14 and 15 in this industry-standard model of Candida infection. On the other hand, GT-35 (16) killed the mice 1 hr post dose at 40 mg/kg.
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Avaliação do efeito osteogênico por diferentes fitoestrógenos em cultura de osteoblastos derivados de células tronco mesenquimais / Evaluation of the osteogenic effect of different phytoestrogens in osteoblasts culture derived from mesenchymal stem cellsFaria, Amanda Natalina de 15 March 2013 (has links)
A menopausa é provocada pela falência da produção de hormônios ovarianos e tem como consequências alterações desfavoráveis no metabolismo e perda de massa óssea. O declínio da produção de estrógeno é considerado um grande fator de risco para o desenvolvimento da osteoporose em mulheres e como tratamento faz-se o uso da Terapia de Reposição Hormonal. No entanto, esta terapia tem trazido riscos á saúde de alguns grupos de mulheres. Como alternativa ao tratamento tradicional, tem-se os fitoestrógenos, e com eles as isoflavonas, encontradas principalmente na soja, Trifolium pratense e Cimicifuga racemosa. Este estudo teve como objetivo comparar a capacidade de estimular a osteogênese in vitro, a partir de cultura de osteoblastos derivados de células tronco mesenquimais, em duas preparações de fitoestrógenos: O extrato de soja biotransformado pelo fungo Aspergillus awamori (ESBF), e o Menoflavon® 40mg (Melbrosin International) composto pela isoflavona Trifolium pratense. Para este objetivo foram realizadas: a) Avaliação do crescimento e proliferação celular b) Viabilidade e crescimento das culturas de osteoblastos. c) Dosagem de proteína total das culturas de osteoblastos. d) Determinação da atividade específica da enzima fosfatase alcalina. e) Formação da matriz mineralizada. O Menoflavon® foi testado nas concentrações de 28,75 nM de daidzeína (D) + 7,5 nM de genisteína (G) (0,5 ?g/mL de Menoflavon®); 57,5 nM de D + 15 nM de G (1 ?g/mL de Menoflavon®); e 230 nM de D + 60 nM de G (4 ?g/mL de Menoflavon®); controle padrão de 57,5 nM de D + 15 nM de G comercial e controle de dimetilsulfóxido (DMSO). O ESBF foi testado nas concentrações de 1,181 nM de D + 0,922 nM de G (0,5 ?g/mL de ESBF); 2,361 nM de D + 1,845 nM de G (1 ?g/mL de ESBF); 9,445 nM de D + 7,379 nM de G (4 ?g/mL de ESBF); controle padrão de 2,361 nM de D + 1,845 nM de G comercial e controle de DMSO. Com a metodologia do MTT (3[4,5-dimetiltiazol-2-il]-2,5-brometo difenil tetrazolium) e da Resazurina comprovamos que não houve morte celular nas concentrações testadas com as duas formulações. A dosagem de proteínas totais manteve-se constante com as duas formulações e a formação de matriz mineralizada também manteve-se constante em relação ao controle para ambos. A atividade específica da fosfatase alcalina teve um decréscimo significativo ao 14º dia com todas as concentrações testadas e ao 21º dia com algumas concentrações de Menoflavon e com o ESBF decresceu em alguns dias, no entanto manteve-se estável no restante do teste. O ESBF mostrou ser melhor que o Menoflavon®, já que obtivemos resultados semelhantes e sua concentração é 24 vezes menor. No entanto, o estudo realizado mostrou que tanto o ESBF quanto o Menoflavon® não são capazes de estimular a osteogênese in vitro, a partir de cultura de osteoblastos derivados de células tronco mesenquimais. / Menopause is caused by failure in the production of ovarian hormones and its consequences are unfavorable changes in metabolism and bone loss. The decline in estrogen production is considered a major risk factor for the development of osteoporosis in women, and the Hormone Replacement Therapy is used as treatment. However, this therapy has brought some risks to the health of some groups of women. As an alternative to the traditional treatment, phytoestrogens as isoflavones, found mainly in soy, Trifolium pratense, Cimicifuga racemosa and rye can be used. This study aimed to compare the ability of two preparations of phytoestrogens to stimulate osteogenesis in vitro (from cultures of osteoblasts derived from mesenchymal stem cells): soy extract biotransformed by the fungus Aspergillus awamori (ESBF), and Menoflavon® 40mg (Melbrosin International) composed by the isoflavone Trifolium pratense. With this objective, were used: a) Evaluation of cell growth and proliferation; b) Viability of the cultures of osteoblasts; c) Determination of total protein from the cultures of osteoblasts; d) Determination of the specific activity of the enzyme alkaline phosphatase; e) Formation of mineralized matrix. Menoflavon® was tested at the concentrations of 28.75 nM of daidzein (D) + 7.5 nM of genistein (G) (Menoflavon® 0.5 ?g/mL); 57.5 nM D + 15 nM G (Menoflavon® 1 ?g/mL); and 230 nM D + 60 nM G (Menoflavon® 4 ?g/mL); standard control of commercial 57.5 nM D + 15 nM G and DMSO control. ESBF was tested at the concentrations of 1.181 nM D + 0.922 nM G (ESBF 0.5 ?g/mL); 2.361 nM D + 1.845 nM G (ESBF 1 ?g/mL); 9.445 nM D + 7.379 nM G (ESBF 4 ?g/mL); standard control of commercial 2.361 nM D + 1.845 nM G and dimetilsulfoxide (DMSO) control. With the MTT and Resazurin methods we verified that there was no cell death for all concentrations tested with the two formulations. The amount of total protein remained constant with the two formulations, and the formation of mineralized matrix also were the same as the control. The specific activity of alkaline phosphatase decreased significantly on day 14 for all concentrations tested, and at day 21 for some concentrations of Menoflavon®, with the ESBF decreased some days, however remained constant in the other tests. Therefore, ESBF proved better than Menoflavon®, since we obtained similar results for both, but the concentration of ESBF is 24 times smaller than the concentration of Menoflavon®. However, both the ESBF and the Menoflavon® were not capable of stimulating osteogenesis in vitro from cultures of osteoblasts derived from mesenchymal stem cells.
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Expressão gênica diferencial durante a esporulação de Blastocladiella emersonii e estudo da sinalização por GMP cíclico / Differential gene expression during Blastocladiella emersonii sporulation and analysis of the cyclic GMP signaling pathwayVieira, André Luiz Gomes 24 April 2009 (has links)
Neste trabalho realizamos a análise das variações na expressão gênica global durante a fase de esporulação do fungo aquático Blastocladiella emersonii utilizando a tecnologia dos microarranjos de cDNA em lâminas contendo 3.773 genes distintos. Ao todo 615 genes foram classificados como induzidos enquanto 645 foram classificados como reprimidos ao longo da esporulação. As categorias funcionais mais representadas entre os genes induzidos foram: microtúbulo e citoesqueleto, transmissão de sinal, atividade de ligação ao íon Ca2+, proteólise (apenas no início da esporulação) e biogênese e organização do cromossomo (apenas no final da esporulação). Dentre os genes reprimidos, as categorias funcionais mais representadas foram: biossíntese de proteína, transporte de carboidratos e metabolismo energético. A comparação dos dados de expressão gênica da esporulação com aqueles obtidos recentemente em nosso laboratório para a germinação mostrou um grande número de genes regulados inversamente ao longo das duas fases de diferenciação do ciclo de vida de B. emersonii. Muitos genes induzidos na esporulação são reprimidos na germinação e vice versa. Analisamos também o efeito de glicose e triptofano sobre a expressão gênica durante a formação dos zoósporos, tendo em vista que tais nutrientes são capazes de inibir a esporulação de B. emersonii. Nossos resultados mostraram que na presença de glicose (1%) genes envolvidos na composição e atividade do citoesqueleto foram superexpressos, enquanto na presença do aminoácido triptofano houve um aumento na expressão de genes envolvidos no processo de enovelamento de proteínas e proteólise, e na resposta ao estresse oxidativo. Além disso, genes envolvidos no processo de esporulação propriamente dito foram reprimidos durante o tratamento com triptofano. Investigamos também a via de sinalização por GMP cíclico (cGMP), cujos níveis aumentam consideravelmente durante a esporulação de B. emersonii. Iniciamos o estudo com uma busca no banco de ESTs de B. emersonii (http://blasto.iq.usp.br) por seqüências que codificassem enzimas envolvidas na síntese e degradação de cGMP. Foram encontradas três ESTs que codificam domínios catalíticos que parecem pertencer a três diferentes guanilato ciclases e uma EST codificando uma fosfodiesterase com alta similaridade com fosfodiesterases que possuem alta afinidade por cGMP. Experimentos de microarranjos de cDNA validados por RT-PCR quantitativo em tempo real mostraram que os quatro transcritos são expressos durante esporulação, com picos de indução durante a fase tardia da esporulação, momento em que ocorre a biogênese dos zoósporos. Além disso, dados obtidos a partir de experimentos in vivo e in vitro utilizando inibidores das enzimas guanilato ciclase e óxido nítrico sintase, sugeriram a participação do íon Ca2+ e do radical livre óxido nítrico (•NO) na atividade de guanilato ciclase, em uma via do tipo Ca2+-•NO-cGMP. / In the present work, we analyzed global gene expression changes during the sporulation phase of the aquatic fungus Blastocladiella emersonii using cDNA microarray technology with chips containing 3773 distinct genes. A total of 615 genes were upregulated and 645 were down-regulated along the sporulation of the fungus. The overrepresented functional categories among the induced genes were: microtubule and cytoskeleton, signal transduction, Ca2+ binding activity, proteolysis (only at the beginning of sporulation), and chromosome biogenesis and organization (only at the end of sporulation). Among the down-regulated genes, the over-represented functional categories were: protein biosynthesis, carbohydrate transport, and energetic metabolism. Sporulation gene expression data were compared with those obtained recently in our laboratory for the germination phase, showing that a great number of genes are inversely regulated along the two differentiation stages of B. emersonii life cycle. We also analyzed the effects of glucose and tryptophan on gene expression during biogenesis of the zoospores, as such nutrients are able to inhibit B. emersonii sporulation. Our results showed that in the presence of glucose (1%) genes related to activity and composition of cytoskeleton were over-expressed, while in the presence of tryptophan genes involved in protein folding, proteolysis and oxidative stress were induced. In addition, genes involved in the sporulation process per se were downregulated by tryptophan treatment. We also investigated the cyclic GMP signaling pathway, as the levels of this cyclic nucleotide increase considerably during B. emersonii sporulation. Firstly, we searched for sequences encoding enzymes involved in cGMP synthesis and degradation using the B. emersonii EST databank (http://blasto.iq.usp.br). Three sequences were found encoding distinct guanylate cyclase catalytic domains, and one showed high similarity with phosphodiesterases that exhibit high affinity for cGMP. Microarray experiments, validated by real time quantitative RT-PCR, showed that the four transcripts are induced during sporulation, reaching maximum levels at the late stages of sporulation, when zoospore biogenesis occurs. In addition, data obtained from in vivo and in vitro experiments using inhibitors for the enzymes guanylate cyclase and nitric oxide synthase indicated the involvement of the ion Ca2+ and the free radical nitric oxide (•NO) in guanylate cyclase activity, suggesting the existence of a Ca2+-• NO-cGMP signaling pathway.
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Isolamento e análise funcional do gene que codifica uma proteína serina-treonina quinase que modula a expressão de genes regulados por carboidratos em Trichoderma reesei / Isolation and functional analysis of the gene encoding a serine-threonine protein kinase that modulates the expression of genes regulated by carbohydrates Trichoderma reeseiMatheucci Junior, Euclides 09 November 2000 (has links)
O gene TrSNF1, homólogo aos membros da subfamília das proteínas serina-treonina quinases ativadas por AMP (AMPK) e relacionadas a SNF1, foi isolado do fungo filamentoso trichoderma reesei. A seqüência de aminoácidos putativa possui um domínio de quinase com 42% de identidade e 59% de similaridade com outras proteínas quinases da mesma subfamília. Em S. cerevisiae a SNFl é essencial para a expressão de genes reprimidos por glicose, em resposta a privação de glicose do meio de cultura. A expressão de TrSNFl em levedura mutante para SNF1, restaura a função de SNF1. A expressão de um antisense de TrSNFl em T. reesei causa um atraso na expressão do gene regulado por glicose, CBHI. Além disso, em experimento utilizando matrizes de DNA foi possível observar uma alteração da tendência global da expressão gênica entre a cepa selvagem e a cepa antisense. A observação da homologia estrutural com proteínas quinase da mesma subfamília, a similaridade funcional com SNFl de S. cerevisiae, e a alteração no padrão da expressão gênica in vivo, sugerem que TrSNFl pode estar envolvido na regulação do metabolismo de carboidratos em T. reesei. / A gene homologue to the members of the AMP-activated/SNFl protein kinase subfamily, TrSNF1, was isolated from the filamentous fungus Trichoderma reesei. The predicted protein of 692 amino acids has a kinase domain, that share 42 % identity and 59 % similarity to that of serine/threonine protein kinase of this family. In Saccharomyces cerevisiae, the SNFl protein kinase is required for expression of glucose repressed genes in response to withdrawal of glucose from the medium. Expression of the Trichoderma reesei SNF1-related sequence in yeast SNFl mutant restores SNFl function. The TrSNFl antisense expression in T. reesei causes a control alteration in the glucose-regulated gene CBHI. The observed structural identity with the AMP-activated/SNFl protein kinase subfamily, and the functional similarity to the yeast SNFl suggest that the TrSNFl may be involved in the regulation of sugar metabolism in Trichoderma reesei.
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Clonagem e caracterização do gene de actina de trichoderma reesei / Cloning and characterization of the actin gene Trichoderma reeseiMatheucci Junior, Euclides 27 October 1993 (has links)
Não consta resumo na publicação. / The gene encoding actin in the cellulolytic filamentus fungus Trichoderma reesei has been isolated and sequenced. The nucleotide sequence reveals that the gene is composed of 6 exons separated by 5 introns within the coding region. The positions of the introns were predicted by comparison of sequence homology to the genes coding for actin with known amino acid sequence and by identification of splice-site signal sequences. The actin protein of Trichoderma reesei shows extensive homology to the actins of other fungi E. nidulans, 95% , T. lanuginosus, 92% and S. pombae. The T. reesei actin promoter has a CT-rich region, CAAT and GC. There is no obvious TATA sequence in the T. reesei actin promoter. The absence of TATA-like sequence were also observed in anothers genes of T. reesei. An important aspect in molecular biology of filamentous fungi is the analysis, under a specific metabolic events, of the mechanism(s) regulating the expression of constitutive and induced genes. The filamentous fungus Trichoderma reesei is considered to be one of the most efficient producer of cellulase, and it serves as a model system for enzymatic cellulose hydrolysis. Expression of the cellulase genes are stringently regulated by the carbon source. Growth on cellulose results in induction of the cellulase transcripts, whereas glucose strongly represses their expression. The availability of a constitutive expressed genes of T. reesei provides not only important information regarding the molecular biology of the fungi, but also is essential for a better understanding of the mechanism(s) controlling the expression of the cellulase transcripts. Under inductive process of the of the major cellulase transcript (cbh1) and its repression by glucose, actin mRNA is constitutively expressed. The present results should be useful for further structural and functional analysis of the elements involved in inductive and constitutive expression of cellulase and actin transcripts.
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