Signal peptide peptidase (SPP) and SPP-like (SPPL) aspartyl intramembrane proteases are known to contribute to sequential processing of type II-oriented membrane proteins referred to as regulated intramembrane proteolysis. The ER-resident family members SPP and SPPL2c were shown to also cleave tail-anchored proteins, including selected SNARE (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) proteins facilitating membrane fusion events. Here, we analysed whether the related SPPL2a and SPPL2b proteases, which localise to the endocytic or late secretory pathway, are also able to process SNARE proteins. Therefore, we screened 18 SNARE proteins for cleavage by SPPL2a and SPPL2b based on cellular co-expression assays, of which the proteins VAMP1, VAMP2, VAMP3 and VAMP4 were processed by SPPL2a/b demonstrating the capability of these two proteases to proteolyse tail-anchored proteins. Cleavage of the four SNARE proteins was scrutinised at the endogenous level upon SPPL2a/b inhibition in different cell lines as well as by analysing VAMP1-4 levels in tissues and primary cells of SPPL2a/b double-deficient (dKO) mice. Loss of SPPL2a/b activity resulted in an accumulation of VAMP1-4 in a cell type- and tissue-dependent manner, identifying these proteins as SPPL2a/b substrates validated in vivo. Therefore, we propose that SPPL2a/b control cellular levels of VAMP1-4 by initiating the degradation of these proteins, which might impact cellular trafficking.

Die integralen Vesikelmembranproteine Synaptophysin und Synaptobrevin interagieren in adulten Neuronen. Zusätzlich bildet Synaptobrevin mit den Plasmamembranproteinen Syntaxin und synaptosome-associated protein 25kDa (SNAP25) den SNAP-Rezeptor (SNARE)-Proteinkomplex, der Voraussetzung für die Fusion zwischen synaptischen Vesikeln und präsynaptischer Membran ist. Mit Synaptophysin interagierendes Synaptobrevin bindet jedoch nicht an den SNARE-Proteinen. Es wird daher vermutet, dass der Synaptophysin/Synaptobrevin-Komplex eine Art Reservepool für Synaptobrevin bei erhöhter neuronaler Aktivität darstellt und die Verfügbarkeit von Synaptobrevin während der Exozytose reguliert. Mit verschiedenen Ansätzen wurde versucht, den auf dem Vesikel befindlichen Komplex genauer zu charakterisieren und in seiner Funktion näher zu beschreiben. Nach Stimulation mit exozytosevermittelnden Substanzen dissoziierte der Synaptophysin/ Synaptobrevin-Komplex, sowohl unter nativen Bedingungen als auch bei Blockierung des finalen Fusionsereignisses. Dieser Prozess war calciumabhängig, konnte jedoch nicht durch die direkte Wirkung von Calcium ausgelöst werden. Die Untersuchung des Komplexes mit Hilfe von clostridialen Neurotoxinen zeigte, dass Synaptobrevin bevorzugt in Bindung an Synaptophysin und als Dimer gespalten wurde. Die Spaltung des SNARE-Proteins SNAP25 hatte keinen Einfluss auf die Komplexbildung. Die Verringerung des Cholesterolgehaltes der Membran führte zur Abnahme der Interaktion von Synaptophysin und Synaptobrevin, umgekehrt zeigte sich ein Anstieg bei zusätzlicher Cholesterolapplikation. In weiteren Experimenten konnte der C-terminale Teil des Synaptobrevins als für die Bindung zu Synaptophysin entscheidende Abschnitt identifiziert werden. Weiterhin konnte die erfolgreiche Translokation von rekombinanten Konstrukten aus Botulinumtoxin D und einem angekoppelten funktionstüchtigen Protein ins Zytosol gezeigt werden. / The vesicle associated membrane proteins synaptophysin and synaptobrevin interact in ma-ture neurones. Additionally synaptobrevin forms a complex with the plasma membrane pro-teins syntaxin and synaptosome-associated protein 25kDa (SNAP25), better known as the SNAP-Receptor (SNARE) complex, which is a prerequisite for fusion of the presynaptic and vesicle membranes. These two protein complexes however are mutually exclusive. It is as-sumed that the synaptophysin/synaptobrevin complex resembles a reserve pool for synapto-brevin and regulates the availability of synaptobrevin for the fusion process in case of in-creased synaptic activity. Different approaches where chosen to characterize this protein complex and to examine its function in more detail. After excessive stimulation the synaptophysin/synaptobrevin complex dissociates, even when the final fusion process is blocked. This step was dependent on the presence of cal-cium, though it could not be triggered directly by calcium administration. When using clos-tridial neurotoxins, synaptobrevin was preferentially cleaved in its homodimeric form and in the complex with synaptophysin. Cleavage of SNAP25 had no effect on the complex forma-tion. Depletion of cholesterol content decreases the interaction of synaptophysin with synap-tobrevin, while cholesterol treatment increases interaction. Further experiments indicated that synaptophysin binds to the the carboxy-terminal transmembrane part of synaptobrevin. Fur-thermore it could be shown that proteins attached to botulinum toxin can be delivered to the cytosol of neuronal cells, being fully active.

La motivation première de mes travaux de recherche est de combiner des approches expérimentales et théoriques dans le domaine de la chimie physique pour atteindre une meilleure compréhension des phénomènes à l'échelle atomique. Mes travaux en cours traitent de systèmes d'intérêt biologique concernant les processus membranaires et des phénomènes accessibles par des méthodes de nanomanipulation. Les problèmes de la biophysique et biochimie sont au c?ur de mes recherches. J'ai effectué des simulations complexes de protéines membranaires dans une bicouche lipidique qui se sont montrées tout à fait complémentaires et révélatrices par rapport aux études expérimentales de biologie structurale. Une récente collaboration exploitant cette complémentarité a donné lieu à une publication dans la revue Nature en début 2009. [[i]] Les travaux récents visent à développer des approches combinant la réalité virtuelle avec les simulations moléculaires. [[ii]] Les systèmes biologiques étudiés présentent à la fois un intérêt physico-chimique, biologique et médical et peuvent atteindre un grand nombre d'atomes. En parallèle, je mène un travail de fond sur les méthodes de simulation et des approches novatrices. ----------------------- [[i]] N. Bocquet, H. Nury, M. Baaden, C. Le Poupon, J.P. Changeux, M. Delarue et P.J. Corringer: "X-ray structure of a pentameric ligand-gated ion channel in an apparently open conformation", 2009, Nature, 457, 111-114. [[ii]] O. Delalande, N. Férey, G. Grasseau et M. Baaden : "Complex Molecular Assemblies at hand via Interactive Simulations", 2009, J. Comput. Chem., 30, 2009, 2375-2387.

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Indiana University-Purdue University Indianapolis (IUPUI) / Glucose homeostasis is maintained through the coordinated actions of insulin secretion from pancreatic beta cells and insulin action in peripheral tissues. Dysfunction of insulin action yields insulin resistance, and when coupled with altered insulin secretion, results in type 2 diabetes (T2D). Exocytosis of intracellular vesicles, such as insulin granules and glucose transporter (GLUT4) vesicles is carried out by similar SNARE (soluble NSF attachment receptor) protein isoforms and Munc18 proteins. An additional regulatory protein, Doc2b, was implicated in the regulation of these particular exocytosis events in clonal cell lines, but relevance of Doc2b in the maintenance of whole body glucose homeostasis in vivo remained unknown. The objective of my doctoral work was to delineate the mechanisms underlying regulation of insulin secretion and glucose uptake by Doc2b in effort to identify new therapeutic targets within these processes for the prevention and/or treatment of T2D. Towards this, mice deficient in Doc2b (Doc2b-/- knockout mice) were assessed for in vivo alterations in glucose homeostasis. Doc2b knockout mice were highly susceptible to preclinical T2D, exhibiting significant whole-body glucose intolerance related to insulin secretion insufficiency as well as peripheral insulin resistance. These phenotypic defects were accounted for by defects in assembly of SNARE complexes. Having determined that Doc2b was required in the control over whole body glycemia in vivo, whether Doc2b is also limiting for these mechanisms in vivo was examined. To study this, novel Doc2b transgenic (Tg) mice were engineered to express ~3 fold more Doc2b exclusively in pancreas, skeletal muscle and fat tissues. Compared to normal littermate mice, Doc2b Tg mice had improved glucose tolerance, related to concurrent enhancements in insulin mumsecretion from beta cells and insulin-stimulated glucose uptake in the skeletal muscle. At the molecular level, Doc2b overexpression promoted SNARE complex assembly, increasing exocytotic capacities in both cellular processes. These results unveiled the concept that intentional elevation of Doc2b could provide a means of mitigating two primary aberrations underlying T2D development.

Indiana University-Purdue University Indianapolis (IUPUI) / In response to glucose, pancreatic islet beta cells secrete insulin in a biphasic manner, and both phases are diminished in type 2 diabetes. In beta cells, cortical F-actin beneath the plasma membrane (PM) prevents insulin granule access to the PM and glucose stimulates remodeling of this cortical F-actin to allow trafficking of insulin granules to the PM. Glucose stimulation activates the small GTPase Cdc42, which then activates p21-activated kinase 1 (PAK1); both Cdc42 and PAK1 are required for insulin secretion. In conjunction with Cdc42-PAK1 signaling, the SNARE protein Syntaxin 4 dissociates from F-actin to allow SNARE complex formation and insulin exocytosis. My central hypothesis is that, in the pancreatic beta cell, glucose signals through a Cdc42-PAK1-mediated pathway to remodel the F-actin cytoskeleton to mobilize insulin granules to SNARE docking sites at the PM to evoke glucose stimulated second phase insulin secretion. To investigate this, PAK1 was inhibited in MIN6 beta cells with IPA3 followed by live-cell imaging of F-actin remodeling using the F-actin probe, Lifeact-GFP. PAK1 inhibition prevented normal glucose-induced F-actin remodeling. PAK1 inhibition also prevented insulin granule accumulation at the PM in response to glucose. The ERK pathway was implicated, as glucose-stimulated ERK activation was decreased under PAK1-depleted conditions. Further study showed that inhibition of ERK impaired insulin secretion and cortical F-actin remodeling. One of the final steps of insulin secretion is the fusion of insulin granules with the PM which is facilitated by the SNARE proteins Syntaxin 4 on the PM and VAMP2 on the insulin granule. PAK1 activation was also found to be critical for Syntaxin 4-F-actin complex dynamics in beta cells, linking the Cdc42-PAK1 signaling pathway to SNARE-mediated exocytosis. Syntaxin 4 interacts with the F-actin severing protein Gelsolin, and in response to glucose Gelsolin dissociates from Syntaxin 4 in a calcium-dependent manner to allow Syntaxin 4 activation. Disrupting the interaction between Syntaxin 4 and Gelsolin aberrantly activates endogenous Syntaxin 4, elevating basal insulin secretion. Taken together, these results illustrate that signaling to F-actin remodeling is important for insulin secretion and that F-actin and its binding proteins can impact the final steps of insulin secretion.

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This study investigated the terms used by drummers and audio engineers to describe the recorded drum kit and the processing applied to it. The main method consisted of semi-structured interviews with six professionals in the fields of drumming and audio engineering. The participants were asked to describe five musical samples of different drum kit mixes containing kick, snare and hi-hat sounds. Their descriptions along with explanations of their communication tactics were compared, resulting in explanations of fourteen semantic descriptors. The comparison of their use of the terms in the context of the samples revealed some differences depending on their professional backgrounds. The results suggested that, while audio engineers have a larger semantic lexicon in regards to the recorded drum kit, the differences in the definitions of terms had a larger degree of variation between individuals than between the respective professions.

No description available.