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Purifica??o, caracteriza??o e avalia??o da atividade antiproliferativa de um inibidor de quimotripsina tipo kunitz de semente de Eryhrina velutinaLucena, Sheila Varela 19 February 2010 (has links)
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Previous issue date: 2010-02-19 / Coordena??o de Aperfei?oamento de Pessoal de N?vel Superior / A chymotrypsin inhibitor was purified from Erythrina velutina seeds by ammonium sulphate fractionation, affinities chromatographies on Trypsin-Sepharose, Quimotrypsin-Sepharose and reversed phase C-18 FPLC/AKTA system. The
inhibitor, named EvCI, shown molecular mass of 17 kDa, as determined by SDSPAGE. 2D-PAGE showed four isoinhibitors with pI values of 4,42, 4,63, 4,83 and 5,06, with molecular mass of 17 kDa each. The aminoacid sequence of EvCI was
determined by MALDI-TOF-MS and showed a high similarity with other Kunitz-type inhibitor of Erythrina variegata. EvCI competitively inhibited chymotrypsin, with Ki of 4 x10-8 M, but did not inhibited trypsin, pancreatic elastase, bromelain and papain. The inhibitory activity of EvCI was stable over wide pH and temperature ranges. In the presence of DTT 100 mM for 120 min, EvCI lost 50 % of activity. Cytotoxicity was studied in HeLa, MDA, HepG2, K562 and PC3 cells after 72-h incubation period. EvCl inhibited HeLa cells growth with an IC50 value of 50 μg/ml. Subsequent studies in HeLa cells analysis of cell death by annexin V/PI double-staining and cell cycle, using flow cytometry. The results provide evidence for a cytostatic activity of EvCl and support further studies on potential application of this inhibitors as an antiproliferative agent in combined therapy against cervical cancer / Um inibidor de quimotripsina do tipo Kunitz foi purificado de sementes de Erythrina velutina por fracionamento com sulfato de am?nio, cromatografias de afinidade Tripsina-Sepharose, Quimotripsina-Sepharose e cromatografia de Fase Reversa C-
18 no sistema FPLC/AKTA. O inibidor, denominado de EvCI, apresentou uma massa molecular de 17 kDa, determinada por SDS-PAGE. A an?lise por eletroforese bidimensional (2D) revelou quatro isoinibidores (valores de pI: 4,42, 4,63, 4,83 e 5,06). Todos os isoinibidores apresentaram massa molecular de 17 kDa. A sequ?ncia aminoac?dica dos pept?deos oriundos da digest?o enzim?tica de EvCI analisada por MALDI-TOF-MS apresentou 100% de identidade com o inibidor de quimotripsina ECl de Erythrina variegata. EvCI inibiu competitivamente a atividade
de quimotripsina com Ki de 4 x10-8 M, mas n?o inibiu tripsina, elastase pancre?tica, bromela?na ou papa?na. Contudo, inibiu elastase de neutr?filos em 35,91 %. A atividade inibit?ria de EvCI sobre quimotripsina foi est?vel em uma ampla faixa de
pH e temperatura. Na presen?a de 100 mM de DTT por 120 min, o inibidor perdeu 50% de sua atividade. A citotoxicidade do inibidor foi avaliada nas linhagens de c?lulas HeLa, MDA, HepG2, K562 e PC3 ap?s exposi??o a concentra??es variando
de 0,0005 a 200 μg/mL, por 72 horas. O EvCl inibiu o crescimento celular de c?lulas HeLa com um IC 50 de 50 μg/mL. Os resultados obtidos na avalia??o de indu??o de morte celular e efeitos sobre o ciclo celular em c?lulas HeLa, indicam que o principal efeito do inibidor ? a indu??o de parada do ciclo celular, sendo, portanto, citost?tico. Os dados sugerem que o EvCl pode ser um composto promissor para ser estudado no futuro como agente citost?tico na terapia antitumoral combinada
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Indu??o de morte celular em c?lulas de adenocarcinoma cervical humano (HeLa) pela lectina da esponja Cinachyrella apion (CaL)Rabelo, Luciana Maria Ara?jo 29 July 2011 (has links)
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Previous issue date: 2011-07-29 / Cancer is a term used to represent a set of more than 100 diseases, including malignant tumors from different locations. The malignancies are the second leading cause of death in the
population, representing approximately 17% of deaths of known cause. Strategies that induce differentiation have had limited success in the treatment of established cancers. In this work, a
lectin purified from the marine sponge Cinachyrella apion (CaL) was evaluated due to its hemolytic, cytotoxic and antiproliferative properties, besides the ability to induce cell death via apoptosis in tumor cells. The antiproliferative activity of CaL was tested against cell lines, with the highest inhibition of tumor growth for HeLa, reducing cell growth at a dose dependent manner, with a concentration of 10 ?g/mL. The hemolytic activity and toxicity against peripheral blood cells
were tested using the concentration of IC50 for both trials and twice the IC50 for analysis in flow cytometry, indicating that CaL is not toxic to these cells. To assess the mechanism of cell death
caused by CaL in HeLa cells, we performed flow cytometry and western blotting. The results showed the lectin probably induces cell death by apoptosis activation by pro-apoptotic protein
Bax, promoting mitochondrial membrane permeabilization, cell cycle arrest in S phase, with accumulation of cells of approximately 57% in this phase, and acting as both dependent and/or independent of caspases pathway. These results suggest that CaL has the potential to be used as drug treatment against cancer. / O c?ncer ? um termo utilizado para representar um conjunto de mais de 100 patologias, incluindo tumores malignos de diferentes localiza??es. As neoplasias malignas constituem a segunda causa de morte na popula??o brasileira, representando aproximadamente 17% dos ?bitos de causa conhecida. Estrat?gias que induzem ? diferencia??o t?m tido sucesso limitado
no tratamento de c?nceres estabelecidos. Neste trabalho, uma lectina purificada da esponja marinha Cinachyrella apion (CaL) foi avaliada quanto ?s suas atividades hemol?tica, citot?xica,
antiproliferativa e quanto ? capacidade de indu??o de morte celular pela via de apoptose em c?lulas tumorais. A atividade antiproliferativa de CaL foi testada contra linhagens celulares, com maior taxa de inibi??o do crescimento para a linhagem tumoral HeLa, induzindo a inibi??o de maneira dose dependente na concentra??o de 10 ?g/mL. A atividade hemol?tica e a toxicidade contra c?lulas do sangue perif?rico foram testadas utilizando a concentra??o de IC50 para ambos os ensaios e o dobro da IC50 para a an?lise em citometria de fluxo, indicando que CaL n?o ? t?xica para estes tipos celulares. Para avaliar o mecanismo de morte celular induzida por CaL nas c?lulas HeLa, foi realizada a citometria de fluxo e western blotting. Os resultados mostraram que a lectina induz morte celular por apoptose atrav?s da ativa??o da prote?na pr?-apopt?tica
Bax, al?m de promover a parada do ciclo celular na fase S, com ac?mulo de c?lulas de aproximadamente 57% nesta fase, agindo tanto de maneira dependente como independente de caspases. Estes resultados sugerem que a CaL possui potencial para ser utilizado como f?rmaco no tratamento contra o c?ncer.
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Strukturelle und biochemische Analyse der 20S Proteasom-Subtypen aus humanen ZellenKlare, Nicola 11 July 2005 (has links)
Das Ubiquitin-Proteasom-System sorgt in eukaryontischen Zellen für einen kontrollierten Abbau von Proteinen. Das 20S Proteasom ist als Multikatalytischer Protease Komplex der zentrale Bestandteil dieses Systems. In der vorliegenden Arbeit konnte gezeigt werden, dass sich gereinigtes 20S Proteasom aus HeLa-Zellen chromatographisch in Subtypen auftrennen lässt, die sich strukturell und in ihrer proteolytischen Aktivität unterscheiden. Nach Induktion der Zellen mit gamma-Interferon (gamma-IFN) werden Immuno-Proteasomen gebildet und es kommt zu einer Veränderung des Subtypen-Musters und der Aktivitäten. Unter dem Einfluss von gamma-IFN bilden sich hauptsächlich Mischkomplexe mit sowohl konstitutiven als auch Immuno-Untereinheiten. Weiterhin konnte gezeigt werden, dass in den Zellkompartimenten Cytoplasma, Zellkern und Microsomen von HeLaS3-Zellen unterschiedliche 20S Proteasom-Subtypen vorkommen. Dies war unter anderem auf eine unterschiedliche Glykosylierung einzelner proteasomaler Untereinheiten zurückzuführen. Die genaue Kenntnis von Struktur und Funktion der 20S Proteasom-Subtypen ist im Hinblick auf neue diagnostische und therapeutische Ansätze in der Humanmedizin von großem Interesse. / The Ubiquitin-proteasome system is responsible for the regulated protein degradation in eucaryotic cells. The 20S proteasome is as a multicatalytic protease the central complex of these system. This study has shown that it is possible to separate 20S proteasome subtypes from HeLa cells by chromatography. 20s proteasome subtypes differ in structure and proteolytic activity. The subtype-pattern and the activity are significantly changed after an induction of the cells with gamma-Interferon (gamma-IFN) under formation of immuno proteasomes. After gamma-IFN induction mainly mixed complexes have been formed with both constitutive and immuno subunits. Further it has been shown that in cell compartements cytoplasm, microsomes and nucleus of HeLaS3 cells different 20S proteasome subtypes are located. Among other things glycosylation of some subunits is responsible for that phenomenon. With regard to new strategies in diagnostic and therapy of human diseases the exactly knowledge of structure and function of the proteasome subtypes is a case of interest.
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Mitochondrial copper homeostasis in mammalian cells / Mitochondrialer Kupfermetabolismus in SäugerzellenOswald, Corina 05 October 2010 (has links) (PDF)
Assembly of cytochrome c oxidase (COX), the terminal enzyme of the mitochondrial respiratory chain, requires a concerted activity of a number of chaperones and factors for the correct insertion of subunits, accessory proteins, cofactors and prosthetic groups. Most of the fundamental biological knowledge concerning mitochondrial copper homeostasis and insertion of copper into COX derives from investigations in the yeast Saccharomyces cerevisiae. In this organism, Cox17 was the first identified factor involved in this pathway. It is a low molecular weight protein containing highly conserved twin Cx9C motifs and is localized in the cytoplasm as well as in the mitochondrial intermembrane space. It was shown that copper-binding is essential for its function.
So far, the role of Cox17 in the mammalian mitochondrial copper metabolism has not been well elucidated. Homozygous disruption of the mouse COX17 gene leads to COX deficiency followed by embryonic death, which implies an indispensable role for Cox17 in cell survival.
In this thesis, the role of COX17 in the biogenesis of the respiratory chain in HeLa cells was explored by use of siRNA. The knockdown of COX17 results in a reduced steady-state concentration of the copper-bearing subunits of COX and affects growth of HeLa cells accompagnied by an accumulation of ROS and apoptotic cells. Furthermore, in accordance with its predicted function as a copper chaperone and its role in formation of the binuclear copper center of COX, COX17 siRNA knockdown affects COX-activity and -assembly. It is now well accepted that the multienzyme complexes of the respiratory chain are organized in vivo as supramolecular functional structures, so called supercomplexes. While the abundance of COX dimers seems to be unaffected, blue native gel electrophoresis reveals the disappearance of COX-containing supercomplexes as an early response. Accumulation of a novel ~150 kDa complex containing Cox1, but not Cox2 could be observed. This observation may indicate that the absence of Cox17 interferes with copper delivery to Cox2, but not to Cox1. Data presented here suggest that supercomplex formation is not simply due to assembly of completely assembled complexes. Instead an interdependent assembly scenario for the formation of supercomplexes is proposed that requires the coordinated synthesis and association of individual complexes.
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An?lises estruturais e atividades biol?gicas de exopolissacar?deo extra?do do fungo comest?vel pleurotus Sajor-Caju e de seu derivado sulfatado quimicamente.Telles, Cinthia Beatrice da Silva 11 February 2010 (has links)
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Previous issue date: 2010-02-11 / Coordena??o de Aperfei?oamento de Pessoal de N?vel Superior / The exopolysaccharides are extracellular compounds produced by some species of fungi and bacteria. It is suggested that these molecules, even when in the form of complex polysaccharide-peptide, are the main bioactive molecules of many fungus. Some of the biological activities displayed by these compounds can be accentuated and others may arise when you add chemically polar or nonpolar groups to polysaccharides. The fruiting body of Pleurotus sajor-caju produces a heteropolysaccharide with antineoplastic and antimicrobial activity, but other biological activities of this polymer have not been evaluated. In this work the exopolysaccharide of Pleurotus sajor-caju was sulfated chemically and structurally characterized. We also evaluated the
antiproliferative, antioxidant and anticoagulant activities from native exopolysaccharide (PN) and its sulfated derivated (PS). Polyacrylamide gel electrophoresis, infrared spectroscopy and nuclear magnetic resonance (??C) proved successful in sulfation of PN to obtain PS. Analysis by gas chromatography-mass spectroscopy showed that PN and PS are composed of mannose, galactose, 3-O-methyl-galactose and glucose in
proportion percentage of 44,9:16,3:19,8:19 and 49, 7:14,4:17,7:18,2, respectively. The percentage of sulfate found in PS was 22.5%. Antioxidants assays revealed that the sulfation procedure affects differently the activities of exopolysaccharides, while the total antioxidant capacity, the scavenging activity of superoxide radical and ferric chelating
were not affected by sulfation, on the other hand the chemical modification of PN enhanced the scavenging activity of hydroxyl radical and reducing power. PS also showed anticoagulant activity in a dose-dependent manner and clotting time was 3.0
times higher than the baseline value in APTT at 2 mg/mL. The exopolysaccharide not presented antiproliferative activity against HeLa tumor cells, but PS affects the cellular proliferation in a time-dependent manner. After 72 h, the inhibition rate of PS (2.0 mg/mL) on HeLa cells was about 60%. The results showed that PN sulfation increase some of their activities. / Os exopolissacar?deos s?o compostos extracelulares produzidos por algumas esp?cies de fungos e bact?rias. ? sugerido que estas mol?culas, inclusive quando na forma de complexo polissacar?deo-pept?deo, s?o as principais mol?culas bioativas de
v?rios fungos. Muitas das atividades biol?gicas apresentadas por esses compostos podem ser acentuadas e outras podem surgir quando se adiciona quimicamente aos polissacar?deos grupamentos polares ou apolares. O corpo de frutifica??o de Pleurotus sajor-caju produz um heteropolissacar?deo com atividade antioneopl?sica e antimicrobiana, contudo outras atividades biol?gicas desse pol?mero ainda n?o foram avaliadas. Neste trabalho o exopolissacar?deo de Pleurotus sajor-caju foi sulfatado quimicamente e caracterizado estruturalmente. Tamb?m foram avaliadas as atividades antiproliferativa, antioxidante e anticoagulante do exopolissacar?deo nativo (PN) e de seu derivado sulfatado (PS). Eletroforese em gel de agarose, espectroscopia de infravermelho e resson?ncia magn?tica nuclear (??C) comprovaram o sucesso na sulfata??o de PN para a obten??o de PS. An?lise por cromatografia gasosa acoplada a espectroscopia de massa mostrou que PN e PS s?o constitu?dos de manose, galactose, 3-O-metil-galactose e glicose na propor??o percentual de 44,9:16,3:19,8:19 e 49,7:14,4:17,7:18,2, respectivamente. O percentual de sulfato encontrado em PS foi de 22,5%. Testes antioxidantes revelaram que o processo de sulfata??o influencia de forma diferente nas atividades do exopolissacar?deo. Enquanto a capacidade
antioxidante total, a capacidade de seq?estro de radical super?xido e a quela??o f?rrica n?o foram influenciadas pela sulfata??o, essa potencializou a atividade seq?estradora
de radicais hidroxila e o poder redutor do exopolissacar?deo. Ap?s o processo de sulfata??o o exopolissacar?deo passou a apresentar atividade anticoagulante de forma dose-dependente, triplicando o tempo de coagula??o em rela??o ao controle numa
concentra??o de aproximadamente 2 mg/mL. O exopolissacar?deo n?o apresentou atividade antiproliferativa frente ?s c?lulas tumorais HeLa, por?m ap?s sulfata??o ele
passou a apresentar essa atividade de forma tempo- ependente, chegando a inibir em 60% a taxa de prolifera??o das c?lulas com 2 mg/mL, ap?s 72 h de exposi??o. Os resultados aqui obtidos mostraram que a sulfata??o do exopolissacar?deo potencializou algumas de suas atividades.
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Mécanisme de la dérégulation du cycle cellulaire de l'hôte par Staphylococcus aureus / Méchanisms of regulation of the host cell cycle by Staphylococcus aureusEl Aour Filho, Rachid Aref 03 November 2016 (has links)
Staphylococcus aureus est une bactérie Gram positive qui colonise la peau des animaux et des humains sains. Dans certaines conditions, telles que la perturbation du microbiote, S. aureus peut induire différentes maladies en déjouant les fonctions de défenses de la cellule hôte. Récemment, notre équipe a montré que les S. aureus méthiciline-résistant (MRSA) souche MW2 (USA400) étaient capables d’induire un retard de la transition de phase G2/M des cellules HeLa. Dans ce travail, nous avons démontré que cette action est initiée par des composants du surnagent de culture de S. aureus.Différentes fractions de surnagents de culture de MW2 ont été obtenues par la chromatographie d’exclusion et analysées par la spectrométrie de masse. Ces techniques nous ont permis d’identifier les peptides phenol-soluble modulins alpha (PSMa) comme responsables du retard du cycle cellulaire des cellules hôtes. Confirmant l’implication de ces modulines, la souche LAC¿psma déficiente en PSMa 1 – 4, n’a pas affecté la progression normale du cyle cellulaire de cellules epitheliales HeLa. De plus, le traitement de ces cellules avec des PSMa1 et PSMa3 synthétiques a induit un retard de la transition de phase G2/M qui a été associé à la diminution de l’expression de gènes codant des défensines ß. Enfin, nous avons démontré que la souche MW2 diminue le niveau d’optineurine et d’optineurine phosphorylée sur la sérine-177, une protéine hôte qui est impliquée dans la transition de phase G2/M. Ce travail représente une étape importante de la compréhension du mécanisme d’interférence de S. aureus / Staphylococcus aureus is a Gram-positive bacterium that colonizes the skin of healthy animals and humans. In certain conditions, including the disruption of the commensal microbiota, S aureus can cause different diseases by deviating the host defense functions. Recently, our group has shown that the methicillin-resistant S. aureus (MRSA) MW2 (USA400) strain causes delay in the transition of the G2/M phase of HeLa cells. In the present work, we demonstrated that this action is initiated by components of the supernatant of the S. aureus culture. Different supernatant fractions were obtained by size exclusion chromatography and were analyzed by mass spectrometry, which allowed to identify phenol-soluble modulins alpha (PSMa) as responsible for the host cell cycle delay.Confirming the involvement of these modulins in the delay, the MRSA LAC¿psma strain, which is deficient in PSMa1–4, did not affect the normal progression of the cycle in HeLa cells. In addition, the treatment of these cells with synthetic PSMa1 and PSMa3 caused delay in the transition of the G2/M phase associated with the decreased production of host ß-defensins. Lastly, we demonstrated that the MW2 strain, which produce PSMa, decreases the level of optineurin and optineurin phosphorylated at serine 177, a host protein that is involved in the G2/M phase transition. The work conducted in this thesis represents an important achievement in the understanding of how S. aureus interferes with the host cell cycle, revealing a new role for PSMa produced by this bacterium.
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Mitochondrial copper homeostasis in mammalian cellsOswald, Corina 13 August 2010 (has links)
Assembly of cytochrome c oxidase (COX), the terminal enzyme of the mitochondrial respiratory chain, requires a concerted activity of a number of chaperones and factors for the correct insertion of subunits, accessory proteins, cofactors and prosthetic groups. Most of the fundamental biological knowledge concerning mitochondrial copper homeostasis and insertion of copper into COX derives from investigations in the yeast Saccharomyces cerevisiae. In this organism, Cox17 was the first identified factor involved in this pathway. It is a low molecular weight protein containing highly conserved twin Cx9C motifs and is localized in the cytoplasm as well as in the mitochondrial intermembrane space. It was shown that copper-binding is essential for its function.
So far, the role of Cox17 in the mammalian mitochondrial copper metabolism has not been well elucidated. Homozygous disruption of the mouse COX17 gene leads to COX deficiency followed by embryonic death, which implies an indispensable role for Cox17 in cell survival.
In this thesis, the role of COX17 in the biogenesis of the respiratory chain in HeLa cells was explored by use of siRNA. The knockdown of COX17 results in a reduced steady-state concentration of the copper-bearing subunits of COX and affects growth of HeLa cells accompagnied by an accumulation of ROS and apoptotic cells. Furthermore, in accordance with its predicted function as a copper chaperone and its role in formation of the binuclear copper center of COX, COX17 siRNA knockdown affects COX-activity and -assembly. It is now well accepted that the multienzyme complexes of the respiratory chain are organized in vivo as supramolecular functional structures, so called supercomplexes. While the abundance of COX dimers seems to be unaffected, blue native gel electrophoresis reveals the disappearance of COX-containing supercomplexes as an early response. Accumulation of a novel ~150 kDa complex containing Cox1, but not Cox2 could be observed. This observation may indicate that the absence of Cox17 interferes with copper delivery to Cox2, but not to Cox1. Data presented here suggest that supercomplex formation is not simply due to assembly of completely assembled complexes. Instead an interdependent assembly scenario for the formation of supercomplexes is proposed that requires the coordinated synthesis and association of individual complexes.:List of Figures and Tables
Abbreviations
Abstract
1 Indroduction
1.1 Mitochondria and the respriratory chain
1.2 The human mitochondrial genome
1.3 Homoplasmy and heteroplasmy
1.4 Mitochondrial disorders
1.4.1 Mutations in mitochondrial DNA
1.4.2 Mutations in nuclear DNA
1.5 Cytochrome c oxidase
1.6 Cytochrome c oxidase assembly
1.7 Copper and its trafficking in the cell
1.8 Mitochondrial copper metabolism
1.9 Cox17
1.10 Aims of the thesis
2 Materials and Methods
2.1 Materials
2.1.1 Chemicals and reagents
2.1.2 Antibodies
2.1.3 Plasmid
2.1.4 Kits
2.1.5 Marker
2.1.6 Enzymes
2.1.7 Primers
2.1.8 siRNAs
2.2 Methods
2.2.1 Cell culture
2.2.1.1 Cell culture: HeLa cells
2.2.1.2 Cell culture: HeLa cells transfected with pTurboRFP-mito
2.2.1.3 Subcultivation
2.2.1.4 Determination of cell number
2.2.1.5 Cell storage and thawing
2.2.2 Transient transfection of HeLa cells
2.2.3 Transfection of HeLa cells with pTurboRFP-mito
2.2.4 Immunocytochemistry
2.2.5 RNA extraction and quantitative real-time PCR
2.2.6 Isolation of mitochondria
2.2.6.1 Isolation of mitochondria for BN-PAGE Analysis
2.2.6.2 Isolation of mitochondria for localization studies
2.2.6.3 Isolation of bovine heart mitochondria
2.2.7 Proteinase K treatment of mitochondria and mitoplasts
2.2.8 Photometric activity assay
2.2.8.1 Citrate synthase activity
2.2.8.2 Cytochrome c oxidase activity
2.2.9 Blue native polyacrylamide gel electrophoresis (BN-PAGE)
2.2.9.1 In gel activity assay
2.2.9.2 2D-BN/SDS-PAGE
2.2.10 SDS-PAGE and Western blot analysis
2.2.11 Direct stochastic optical reconstruction microscopy (dSTORM)
2.2.12 Flow cytometric phenotyping
2.2.12.1 Determination of cell cyle phase
2.2.12.2 Identification of apoptotic cells
2.2.12.3 Detection of ROS
2.2.13 Oxygen measurement
2.2.14 Cu–His supplementation
3 Results
3.1 Subcellular localization of Cox17
3.2 Transient knockdown of COX17 in HeLa cells
3.2.1 Knockdown of COX17 mRNA
3.2.2 Knockdown of Cox17 protein
3.2.3 Effect of COX17 knockdown on the steady-state levels of OXPHOS
subunits
3.2.4 Effect of COX17 knockdown on the steady-state levels of copperbearing COX subunits
3.2.5 Subdiffraction-resolution fluorescence imaging
3.3 Phenotypical characterization
3.3.1 Growth analyis
3.3.2 Cell cycle analysis
3.3.3 Apoptosis assay
3.3.4 Detection of ROS
3.3.5 Oxygen measurement
3.4 Cytochrome c oxidase activity
3.5 Characterization of mt OXPHOS complexes
3.5.1 BN-PAGE/in gel activity assays
3.5.2 Supramolecular organization of COX
3.5.3 Molecular organization of Cox17
3.5.4 Molecular organisation of copper-bearing COX subunits Cox1 and
Cox2
3.5.5 Supramolecular organization of RC complexes
3.5.6 dSTORM of supercomplexes
3.6 Copper supplementation
4 Discussion
4.1 Dual localization of human Cox17
4.2 COX17 knockdown affects steady-state levels of copper-bearing
COX subunits Cox1 and Cox2
4.3 Supramolecular organization of RC is affected as an early response
to COX17 knockdown
4.4 Cox17 is primarily engaged in copper delivery to Sco1/Sco2
4.5 Copper supplementation alone cannot rescue the COX17
phenotype
4.6 Outlook
5 Appendix
6 PhD publication record
7 References
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Friendsprogrammets förankring på Åkerskolan - En kvalitativ studie om mobbning och kränkande behandlingRydstrand, Maria, Åkesson, Moa January 2016 (has links)
Sammanfattning Bakgrund: Det finns flera antimobbningsprogram som syftar till att reducera mobbning och kränkande behandling, varav ett är Friendsprogrammet. Det syftar till att utbilda och stödja skolor i deras antimobbningsarbete. Med Friendsprogrammet kartläggs förekomsten av mobbning och kränkande behandling återkommande under tre år och resultatet analyseras och följs sedan upp. Arbetets utgångspunkt är en hela-skolan-ansats där samtliga i verksamheten ska ha kännedom om hur antimobbningsarbetet ska gå till utifrån förebyggande, främjande och åtgärdande insatser. Syfte: Med fokus på klasslärares upplevelser och erfarenheter ämnar föreliggande studie att undersöka klasslärarnas inställning till Friendsprogrammet på Åkerskolan (ett fiktivt namn). Studien syftar även till att undersöka Åkerskolans förutsättningar att bedriva ett antimobbningsarbete, med särskilt fokus på skolklimat, handlingsutrymme och ett systematiskt förhållningssätt. Metod: Studien har en kvalitativ ansats och empiri har inhämtats via semistrukturerade intervjuer med klasslärare på en Friendsskola och från skolans likabehandlingsplan. Utifrån studiens teoretiska ramverk analyseras skolans antimobbningsarbete. Resultat: Åkerskolan använder inte Friendsprogrammet i större utsträckning. Klasslärarnas inställning till programmet är överlag negativ, resultatet indikerar att de till viss del inte arbetar enligt ett systematiskt förhållningssätt och att de har ett stort handlingsutrymme att forma sitt antimobbningsarbete. Skolklimatet är positivt och det utgör förutsättningar att bedriva ett framgångsrikt antimobbningsarbete.
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Avaliação das atividades antimicrobiana, antioxidante e de citotoxidades de produtos extraídos da Agave sisalana PerrineVieira, Juliana Patrícia de Luna 27 August 2014 (has links)
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Previous issue date: 2014-08-27 / Agave sisalana is a plant of Mexican origin that is characterized by providing the
stiffest fiber in the world: the sisal. In Brazil, this plant is an important source of
income for farmers in semi-arid regions mainly in the states of Bahia and Paraíba.
The ability to create jobs is related to maintenance of the crops, harvesting, refining,
processing fiber, industrialization and production of crafts. The aim of this study was
to determine the antimicrobial, antioxidant and cytotoxicity of Agave sisalana Perrine
in wastes obtained from the leaves of defibrillation. Antibacterial activity was
determined against Staphylococcus aureus, Escherichia coli, Pseudomonas
aeruginosa and against fungiCandida albicans. The antioxidant activity was
performed with the method of DPPH. The cytotoxicity was detected in HeLa cells
using the cell proliferation reagent WST-1. The antibacterial activity was found in RL0
(E. coli, P. aeruginosa) and EEB-1 (S. aureus). Activity against C. albicans was
found in RL-0, EEB-0 and EEB-1. Ethanol extracts have antioxidant activity, this
analysis was not performed with liquid waste because they do not solubilized in
ethanol. The cytotoxicity assay showed that the RL-0 is toxic at concentrations that
have antimicrobial activity. The RL-1, EEB-0 and EEB-1, above extracts showed cell
viability of the positive control (cells + DMSO), when the concentrations of 5 mg/ml, 1
mg/ml and 1 mg/mL, respectively. These results demonstrate that Agave sisalana
can be a source of new therapeutic assets. / A Agave sisalana é uma planta de origem mexicana que se destaca por fornecer a
fibra mais dura do mundo: o sisal. No Brasil, essa planta representa uma importante
fonte de renda para agricultores de regiões semi-áridas principalmente dos estados
da Bahia e Paraíba. A capacidade de gerar empregos está relacionada à
manutenção das lavouras, colheita, desfibramento, beneficiamento da
fibra,industrialização e confecção de artesanato. O objetivo desse trabalho foi
determinar as atividades antimicrobiana, antioxidante e de citotoxicidade da Agave
sisalana Perrine, em resíduos obtidos da desfibrilação das folhas. Foram utilizados
os resíduos líquido (RL-0), líquido seco em spray drying (RL-1), extrato etanólico
concentrado bruto do resíduo sólido (EEB-0) e extrato etanólico concentrado bruto
seco em spray drier do resíduo sólido (EEB-1). A atividade antibacteriana foi
determinada em cepas de Staphylococcus aureus, Escherichia coli, Pseudomonas
aeruginosae a antifúngica em cepa de Candida albicans. A atividade antioxidante foi
realizada com o método do 2,2-difenil-1-pricril-hidrazil (DPPH). A citotoxicidade foi
verificada em células HeLa utilizando o reagente de proliferação celular composto
terrazólico (WST-1). A atividade antibacteriana foi encontrada no RL-0 (E. coli, P.
aeruginosa) e no EEB-1 (S.aureus). A atividade contra C. albicans foi encontrada em
RL-0, EEB-0 e EEB-1. Os extratos etanólicos apresentam atividade antioxidante. O
ensaio de citotoxicidade demonstrou como esperado que o RL-0 é tóxico nas
concentrações que apresentaram atividade antimicrobiana. Os extratos RL-1, EEB-0
e EEB-1, mostram viabilidade celular acima do controle positivo (células + DMSO)
quando nas concentrações de 5 mg/mL, 1 mg/mL e 1 mg/mL, respectivamente.
Esses resultados demonstram que os resíduos de decorticação de Agave sisalana,
que atualmente são desperdiçados, podem ser fonte de novos ativos terapêuticos.
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DNA-Kohlenstoffnanorohr-Konjugate - Biokompatibilität, ex vivo-Verhalten, Funktionalisierung / DNA-carbon nanotube conjugates - biocompatibility, ex vivo behavior, funtionalizationKröker, Kristin January 2012 (has links) (PDF)
Einzelstrang-DNA-dispergierte und individualisierte (6,5)-chirale Kohlenstoffnanoröhren bilden als Konjugatsystem den Ausgangspunkt dieser Dissertation. Im Vordergrund stehen dabei Untersuchungen zur Biokompatibilität dieser ssDNA-SWNT-Konjugate sowie deren Verhalten nach Zellpenetration und eine Funktionalisierbarkeit zum Wirkstofftransportsystem. Das erste Projekt widmet sich in Kapitel 4 dem Studium der Konjugatstabilität unter physiologischen Bedingungen und einer Verträglichkeit gegenüber zellulären Systemen. Experimente zur Biokompatibilität werden erstmals an Nanorohrkonjugaten durchgeführt, welche nach Ultrazentrifugation im Dichtegradienten sorgfältig individualisiert vorliegen. Die umgebungssensitiven photophysikalischen Charakteristika vereinzelter (6,5)-SWNTs können zu einer Beurteilung der Konjugatintegrität in physiologischem Milieu genutzt werden. Die Stabilität von ssDNA-SWNT-Strukturen wird in Anwesenheit des Restriktionsenzyms DNase I und dem in Zellnährmedien enthaltenen protein- und nukleasereichem Serum FBS auf die Probe gestellt. In beiden Fällen kann eine ausreichende ssDNA-SWNT-Integrität attestiert werden, die eine Verwendung unter Zellkultivierungsbedingungen erlaubt. Unter Berücksichtigung verschiedener in Zellen vorliegender pH-Umgebungen werden die Konjugate ebenfalls dieser Variation ausgesetzt. Bei Vorliegen stark saurer und basischer pH-Werte kann die Integrität von ssDNA-SWNT-Konjugaten nicht gewährleistet werden, was sich durch Aggregation bemerkbar macht. Innerhalb des breiten pH-Bereichs zwischen den Werten 3 und 11 hingegen kann eine gute Stabilität bestätigt werden. Für zelluläre Anwendungen bedeutet dieser Befund keine Einschränkung, da in Kulturen lediglich neutrale bis schwach saure pH-Werte oberhalb von 4.5 zu finden sind. Nachdem die Biostabilität der ssDNA-SWNT-Konjugate gewährleistet ist, kann in Zytotoxizitätsstudien eine ex vivo-Verträglichkeit des Nanomaterials getestet werden. Erste Untersuchungen mit der Mausmakrophagenlinie J774.1 weisen wie auch ausführliche Studien gegenüber menschlichen Epithelzellen HeLa auf eine uneingeschränkte Kompatibilität in den eingesetzten Konzentrationen hin. HeLa-Zellen, die mit DGU-gereinigten Nanorohrproben behandelt werden, zeigen eine geringfügig höhere Vitalität als nach Inkubation mit einer Rohdispersion undefinierter SWNT-Bündel. Im Gesamtbild ergibt sich somit eine zufriedenstellende Biokompatibilität individualisierter ssDNA-SWNT-Konjugate, womit das in dieser Arbeit zentrale Kohlenstoffnanorohrsystem den Anforderungen für dessen biomedizinische Verwendbarkeit gerecht wird. Der Schwerpunkt weiterer Untersuchungen liegt im zweiten Projekt aus Kapitel 5 auf dem Verhalten von ssDNA-SWNT-Konjugaten nach deren Aufnahme in HeLa-Zellen. Auch hier kann die starke Sensitivität der optischen Eigenschaften individualisierter (6,5)-Kohlenstoffnanoröhren gegenüber Umgebungseinflüssen genutzt werden, um Veränderungen im Emissionsverhalten von SWNTs nach deren zellulärer Aufnahme gegenüber dem Ausgangszustand zu beobachten. Nach ausführlicher Weißlicht-, Fluoreszenz- und SWNT-Photolumineszenzmikroskopie, aus deren Resultaten eine erfolgreiche Internalisierung von ssDNA-SWNTs in HeLa-Zellen eindeutig hervorgeht, stehen PL-spektroskopische Untersuchungen der Kohlenstoffnanoröhren im Vordergrund. Durch einen Vergleich des Emissionsverhaltens der ssDNA-SWNT-Konjugate in und außerhalb von Zellen können spektrale Verschiebungen, Linienverbreiterungen und verkürzte Fluoreszenzlebensdauern nach zellulärer Aufnahme festgestellt werden. Sowohl eine Aggregation von SWNTs als auch eine Beeinflussung durch die pH-Umgebung reichen nicht für eine vollständige Erklärung des Befunds aus. Vielmehr kann die in endosomalen Kompartimenten durch das Größenverhältnis von Endosomen zu SWNTs entstehende räumliche Nähe einer großen Nanorohrmenge untereinander als Ursache für eine Veränderung der dielektrischen Umgebung und folglich des Emissionsverhaltens betrachtet werden. Durch Verwendung der Kohlenstoffnanoröhren als Marker und Sensor können ssDNA-SWNT-Konjugate in Zellen somit nicht nur lokalisiert, sondern darüber hinaus hinsichtlich einer möglichen Aggregation untersucht werden. Aus den in dieser Arbeit vorgestellten Daten kann zwar eine vollständige Aggregation der SWNTs durch deren Aufnahme in Zellen ausgeschlossen werden, sie muss jedoch in geringfügigem Ausmaß neben einer Beeinflussung durch die pH-Umgebung und die große räumliche Nähe durchaus in Betracht gezogen werden. Individualisierte ssDNA-SWNT-Konjugate können damit erstmals zeitaufgelöst PL-mikrospektroskopisch in HeLa-Zellen charakterisiert werden. Für das letzte Projekt werden in Kapitel 6 neuartige Funktionalisierungsmöglichkeiten von ssDNA-SWNT-Konjugaten zu zellulären Transportsystemen unter Erhalt der photophysikalischen Eigenschaften erforscht. Dazu soll das Dispergiermittel DNA als Kupplungsstelle für eine kovalente Anbindung eines Agenz genutzt werden. Anstelle eines Wirkstoffes werden die Untersuchungen mit einem Fluorophor als Modellverbindung durchgeführt, welcher den Vorteil einer einfachen Detektierbarkeit liefert. Prinzipiell besteht die Möglichkeit, das Oligomer mit dem Fluorophor vorzufunktionalisieren und anschließend auf die Oberfläche der SWNTs zu bringen. Als effektiver erweist sich die Methode der direkten Kupplung des Farbstoffs an bereits DNA-dispergierte SWNTs. Der Erfolg in der Präparation von FluorophorssDNA- SWNT-Konjugaten wird über die Emission des Fluorophors mit entsprechenden Referenzexperimenten gemessen. Der Versuch einer Quantifizierung liefert jedoch sehr hohe Werte, die lediglich als eine obere Grenze für die gefundene Anzahl gebundener Fluorophore pro Nanoröhre angesehen werden können. Im Verlauf des Projekts kann eine Funktionalisierbarkeit der Nanoröhren über das Dispergieradditiv DNA als neue Strategie aufgezeigt werden. Im Gegensatz zu bekannten Wirkstofftransportsystemen bietet dieser Funktionalisierungsansatz den Vorteil, dass die optischen Eigenschaften der individualisierten ssDNA-SWNT-Konjugate erhalten bleiben, welche wieder um einen gleichzeitigen Einsatz der Nanoröhren als Transporter und Marker bzw. Sensor erlauben. Die vorliegende Dissertation liefert neben dieser bisher unbekannten Funktionalisierungsstrategie neue Erkenntnisse über die Biokompatibilität speziell von individualisierten ssDNA-SWNT-Konjugaten und deren Verhalten in HeLa-Zellen. Mit diesem Wissen kann der gezielte Wirkstofftransport durch Kohlenstoffnanoröhren als biokompatibles und zellgängiges Trägersystem anvisiert werden. / The key element of this thesis is a conjugate system of single-stranded DNA and individualized (6,5) single-wall carbon nanotubes. The investigations are mainly focused on the biocompatibility of ssDNA-SWNT conjugates, as well as their behavior after cell penetration and general ability to be functionalized for drug delivery. Within the first project, chapter 4 contributes to the study the conjugate stability under physiological conditions and compatibility towards cellular structures. For the first time, such biocompatibility experiments are carried out with nanotube conjugates, which are thoroughly individualized by ultracentrifugation assisted density gradient. The photophysical characteristics of isolated (6,5) SWNTs are highly sensitive towards their environment and can thus be used to evaluate the state of conjugate integrity in a physiological milieu. The stability of ssDNA-SWNT structures is tested in the presence of restriction enzyme DNase I and FBS serum, an important nutrient medium ingredient rich in proteins and nucleases. In either case, the integrity of ssDNA-SWNT conjugates is not affected. With respect to the pH variety occuring in cell structures, the conjugate stability is also investigated in acid and base milieu. Both strong acid and alkaline pH environments influence the integrity of ssDNA-SWNT, leading to aggregation of nanotubes. Conversely, good conjugate stability can be evaluated in a wide pH range between 3 and 11, revealing unlimited applicability towards cells, where the pH environment is known to vary between neutral and weakly acid pH values above 4.5. After evaluation of the biostability of ssDNA-SWNT conjugates, they have to be tested in ex vivo cytotoxicity assays. Studies are primarily carried out with murine macrophage-like cells J774.1 and in more detail with the human cervix carcinoma cell line HeLa. Both indicate no cytotoxic effects with applied SWNT concentrations. Within the HeLa cell studies, the impact of DGU preparation on SWNT cytotoxicity is a further point of interest. As a result, slightly enhanced cell viability can be observed with DGU purified samples as compared to raw dispersion consisting of non-defined SWNT bundles. Overall, ssDNA-SWNT conjugates can be assumed to be sufficiently biostable and thus suitable for biomedical applications. Further investigations in the second part of this work in chapter 5 are focused on the behavior of ssDNA-SWNT conjugates after cellular uptake. Again, the strong environmental sensitivity of optical properties of individualized (6,5) carbon nanotubes can be used to detect changes of the SWNT emission after internalization. Different techniques have been employed to visualize ssDNA-SWNT structures in HeLa cells using white light, fluorescence, and SWNT photoluminescence microscopy. By PL spectroscopy of ssDNA-SWNTs in cells spectral shifts, line-broadening and shortened lifetimes are observed when comparing SWNT emission inside and outside of cell culture. Neither nanotube aggregation nor the influence of the cell-specific pH environment are sufficient explanations for such spectral behavior. Indeed, the spatial proximity of SWNTs with each other in small sized endosomal cell compartiments is supposed to cause nanotube-nanotube interactions that change the dielectric environment and thus the emission behavior of SWNTs. Within the use of carbon nanotubes as marker and sensor, ssDNA-SWNT conjugates cannot only be localized, but also characterized, with regard to possible nanotube aggregation. The data presented in this work can, on the one hand, exclude a total aggregation of SWNTs within their cellular uptake. But, on the other hand, a small extent of aggregation, pH environmental effects, and the spatial proximity of a high amount of SWNTs in comparatively small endosomes have to be considered as factors that influence SWNT emission properties. In this study, individualized ssDNA-SWNT conjugates can be characterized via time-resolved PL microspectroscopy for the first time. The last project in chapter 6 addresses to new functionalization routes of ssDNA-SWNT conjugate with respect to drug delivery applications while retaining the photophysical characteristics. The SWNT dispersion additive DNA serves as binding site for covalent attachment of agents. For a convenient sample characterization, a fluorophor is used as model compound instead of a specific drug. In general, fluorophor-ssDNA-SWNT systems can be obtained by pre-functionalization of oligomers with dye, followed by attachment of the modified DNA on the nanotube surface. More promising, however, is the route via a direct coupling reaction of activated fluorophor molecules with specific ssDNA-SWNT conjugates. The successful sample functionalization can be evaluated from the fluorescence of the dye in comparision with corresponding control experiments. An attempt for quantification of functionalization is found to be problematic as the revealed values are too high and can thus only be regarded as upper limits for the number of fluorophors per nanotube. A new functionalization method for SWNTs can be established using noncovalently bound DNA as the coupling point. Compared to well-known drug delivery systems, the optical properties of SWNTs can be retained with this procedure, allowing the simultaneous use of nanotubes as cellular transporter and marker or sensor. In addition to the new functionalization strategy, further knowledge about biocompatibility of well-isolated ssDNA-SWNT conjugates and their behavior after cellular uptake can be obtained through this thesis. Thus, a targeted drug delivery with isolated carbon nanotubes as biocompatible and a cell penetrating carrier system could be aimed for future work.
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