No description available.

<p>Biological invasion is a major and growing threat to global biodiversity and human well-being, but research on the impacts of invaders on their recipient environments lags behind that on the mechanisms driving invader establishment and spread. The total impact of an invader is defined by its range size, abundance per unit area, and per-capita effect, with both per-capita effects and abundance varying over time and across the invader’s range. These context-dependencies are determined, in part, by functional differentiation between the invader and its recipient system. In this thesis, I investigate how functional differentiation between invaders and their recipient communities regulates the impact of plant invaders on community diversity and/or biomass production.</p> <p>First, I compare the effects of invasive Callery pear (<em>Pyrus calleryana</em> Decne.) to functionally similar native trees in three early-successional meadow environments in Indiana’s eastern corn belt plains. Despite my prediction that <em>P. calleryana</em> would have greater negative effects on the total biomass and diversity of the understory plant community compared to native trees, I found that <em>P. calleryana</em> had no significant impact on total cover, species richness, or Shannon’s or Simpson’s diversity indices for the understory community, compared to native <em>Liriodendron tulipifera</em> L., <em>Platanus occidentalis</em> L., or non-tree control plots. Likewise, <em>P. calleryana</em> had no significant impact on the native, introduced, woody, or native tree subsets of the understory community. These results indicate that the trait differences between <em>P. calleryana</em> and functionally similar native trees – and thus the per-invader effect of <em>P. calleryana</em> on its recipient community – are not of a great enough magnitude to produce changes in the understory community composition of these highly invaded, low diversity meadow environments with relatively new and sparse <em>P. calleryana</em> invasions. </p> <p>I then investigate the role of functional overlap in moderating invader impacts in California serpentine grassland communities through the lens of classic niche theory, which predicts that functional differentiation minimizes competition and therefore allows functionally distinct invaders to achieve higher establishment success but lower per-capita effects on their recipient communities. I tested this prediction by establishing small-scale experimental communities composed of individual or multiple functional groups differentiated by phenology – early-season annuals, nitrogen-fixing early-season annuals, and late-season annuals – and seeding these communities with early- or late-season invaders. I found that as invader density increased, effects on resident community biomass depended on complex patterns of invader and resident functional overlap. Across all resident community functional groups, the high density of early-season invaders enables them to capture a greater portion of total community biomass than late-season invaders, but early-season invaders reduce the ratio of resident:total invader biomass production by less, per-unit-biomass, than late-season invaders. These results highlight the need to consider both niche and fitness differences in predicting invader impacts and the complex nature of resident-invader interactions, which may not be sufficiently captured by coarse functional groups.</p>

No description available.

Colorectal cancer (CRC) is the third most widespread and fourth most fatal malignancy disease. The CRC from a primary site can spread to other tissues, forming secondary tumours. CRC can metastasise to the liver through the effect of K-Ras and Pten mutation (Mt.) (Abbas et al. 2020). This study aimed to assess the hypothesis that the Ran inhibitor mebendazole MBZ reduces cell invasion and metastasis of CRC. I have investigated MBZ effect on the CRC isogenic human cell lines with specific mutations (HCT-116 K-Ras, DLD-1 K-Ras and Pten deletion and wild type HCT-116 and DKO-3. I used qRT-PCR and western blotting to identify expression levels of various genes and signalling molecules after treatment with 0.5 mM MBZ. In addition, several assays were performed to investigate MBZ effect on biological properties of the cells such as proliferation, migration, invasion, and colony formation. MBZ downregulated Ran and induced apoptosis through inhibition of Bcl-2 expression as well as inducing caspase -3, -7, -9 and PARP cleavage. Moreover, MBZ showed an effect on immune response by down regulating C5a, IL-1ß and IL-1α analysed at mRNA level. When treated with MBZ, the migration, invasion and colony formation abilities of HCT-116 K-Ras Mt., DLD-1 K-Ras Mt. and HCT-116 Pten-/- were significantly reduced compared to a control treated cell line. This was also the case with wild type cell lines such as HCT-116 and DKO-3. Furthermore, signalling molecules such as p- Erk 1/2 and p- Akt were upregulated after MBZ treatment and exert inhibition on Akt 1/2/3 and VEGFR1/2 mRNA levels. In conclusion; MBZ which is a Ran inhibitor, has significantly reduced proliferation, colony formation, and migration in colorectal cell lines with K-Ras and Pten gene deletion compared to wild type cells in a dose-dependent manner. This work paves the way to clinical validation of MBZ as a combination therapy for reducing the invasion of CRC cells.

Störungen der zirkadianen Uhr beeinflussen zelluläre Prozesse wie Transkription, Zellzyklus und Stoffwechsel und können Tumorentstehung fördern. Unsere Studien untersuchten die Auswirkungen solcher Störungen auf die Krebsentwicklung durch Herunterregulation oder Ausschalten von Kern-Uhrgenen wie BMAL1 (ARNTL), PER2 oder NR1D1. Wir verwendeten in vitro- und in vivo-Modellen mit Darmkrebszelllinien HCT116, SW480 und SW620. Diese Manipulationen veränderten die zirkadiane Expression von MYC, WEE1 und TP53 (wichtig für Zellzyklus und Apoptose) sowie MACC1 (verbunden mit epithelial-mesenchymaler Transition und Metastasierung). Diese Veränderungen beeinflussen Zellproliferation, Apoptose, Migration und Invasion. Das Ausschalten von NR1D1 verringerte die Zellbeweglichkeit in vitro und reduzierte die Mikrometastasenbildung in vivo, begleitet von geänderten SNAI1 und CD44-Expressionen. MACC1 wird in HCT116-Wildtypzellen zirkadian exprimiert, was nach dem Ausschalten der Kern-Uhrgene gestört war. Wir identifizierten außerdem eine MACC1-NR1D1-Protein-Interaktion, die eine neue Regulierungsachse bei der Darmkrebsprogression darstellt. Unsere Daten zeigen, dass MACC1-Modulation den zirkadianen Phänotyp und Krebsfortschritt beeinflusst. MACC1-Knockout reduzierte die BMAL1-Oszillationsperiode, während seine Überexpression den gegenteiligen Effekt hatte. Dieses Zusammenspiel unterstreicht die Komplexität der Mechanismen bei Darmkrebs und die Rolle der zirkadianen Uhr bei der Metastasierung. Unsere Ergebnisse heben die Rolle von Kern-Uhrgenen bei Krebsprozessen wie Migration und Invasion hervor und bieten Einblicke in das MACC1-zirkadiane Uhr-Zusammenspiel in Darmkrebs. Zukünftige Forschungen könnten chronotherapeutische Strategien entwickeln, um Krebsbehandlungen zu personalisieren und zu verbessern. / Disruptions of the circadian clock affect cellular processes like transcription, cell cycle, and metabolism, potentially triggering tumorigenesis. Our studies examined the effects of these disruptions on cancer by downregulating or knocking out core-clock genes BMAL1 (ARNTL), PER2, or NR1D1. For this, we used in vitro and in vivo models with colorectal cancer (CRC) cell lines HCT116, SW480, and SW620. Core-clock gene manipulations altered circadian expression of MYC, WEE1, TP53 (involved in cell cycle and apoptosis), and MACC1 (linked to epithelial-mesenchymal transition and metastasis formation), affecting proliferation, apoptosis, migration, and invasion. NR1D1 knockdown reduced cell motility in vitro and decreased micrometastasis formation in vivo, with altered SNAI1 and CD44 expression. Furthermore, we showed that MACC1 is circadian expressed in HCT116 wild-type cells, and that its rhythmic expression is disrupted after core-clock gene knockout. We also found MACC1-NR1D1 protein-protien interactions, suggesting a new regulatory axis in CRC progression. Our data show MACC1 modulation impacts the circadian clock phenotype and cancer progression. Remarkably, MACC1 knockout reduced BMAL1 promoter oscillation period, while its overexpression had the opposite effect. This interplay highlights the circadian clock complexity and its role in CRC metastasis. Our findings underscore vital roles for core-clock genes in cancer processes like migration and invasion, providing insights into MACC1-circadian clock interplay in CRC. Future research may develop chronotherapeutic strategies for more personalized and effective treatments.

In the wake of the Russian invasion of Ukraine, a compelling question arises, could this event have brought Europeans closer? Armed conflicts often strengthen in-group identity as individuals seek safety from external threats. This study speculates that the perceived threat of the invasion might have intensified emotional attachments to Europe across the continent. Additionally, it explores how the response differed between Western Europe and Central and Eastern European countries. This study bases its conceptualization, hypotheses, and interpretations on social identity theory, alongside a comprehensive review of the literature on armed conflict and identity. Utilizing a quasi-experimental method to investigate the probable causal link and using 12 countries from the 10th round of the European Social Survey to generalize the findings across a diverse European population. The findings reveal that Europeans did not develop a stronger sense of European identity in response to the invasion, suggesting that Europeans do not perceive Europe as a meaningful identity to unite under or seek safety in when military conflicts intensify on the continent. This study contributes to the understanding that the European project, along with its socio-political efforts, has been relatively unsuccessful in establishing itself as a significant unifying point when conflicts intensify.

Blue Catfish Ictalurus furcatus are native to tributaries of the Mississippi River but are now invasive in several Atlantic slope drainages. This includes subestuaries of the Chesapeake Bay, where their feeding ecology and potential impact on native species was largely unknown. We collected stomach contents from 16,110 Blue Catfish at 698 sites in three large subestuaries of the Chesapeake Bay (James, York, Rappahannock rivers). Cumulative prey curves revealed that sample size was sufficient for diet description, though 1,000 – 1500 stomachs were needed per river. Blue Catfish are opportunistic generalists that feed on a broad array of plant and animal material. Logistic regression models reveal that Blue Catfish undergo significant ontogenetic diet shifts to piscivory at larger sizes (P<0.01) though the lengths at which these shifts occur varies by river system (500 – 900 mm total length; TL). Over 60% of Blue Catfish stomachs contained other invasive species, primarily Hydrilla verticillata and Asian clams Corbicula fluminea. Canonical Correspondence Analysis (CCA) revealed that salinity and season explained the most variation in Blue Catfish diet, while Generalized Additive Models (GAMs) demonstrated that there is considerable spatiotemporal and length-based variation in predation of species of concern. Species of concern include American Shad, American Eel, and river herring, which are imperiled, and blue crab, which support valuable fisheries in Chesapeake Bay. Predation of American Shad, American Eel, and river herring was rare (max predicted occurrence in Blue Catfish diets = 8%), while blue crab was much more common in the diet (max predicted occurrence =28%). Predation of American Shad and river herring peaks in freshwater areas in April, while predation of blue crab peaks in brackish areas in October. Predation of all species of concern is highest for large catfish (500 – 1000 mm TL). Field and laboratory-based estimates of consumption rate revealed that Blue Catfish feed at similar rates as Channel Catfish Ictalurus punctatus, and daily ration is estimated to be 2-5% bodyweight per day during warm temperatures, while peak feeding (maximum daily ration) can approach 10% bodyweight per day. While consumption of imperiled species is rare, Blue Catfish could still have negative impacts on these species due to dense catfish populations. / Ph. D. / Native to the Mississippi River basin, Blue Catfish Ictalurus furcatus are the largest catfish species in North America; they can exceed 100 lbs and live for over 30 years. They were stocked in Chesapeake Bay as a sportfish 40 years ago and are now considered invasive. We performed a series of experiments to describe how invasive Blue Catfish fit in the food web, including diet and consumption rate analyses. Most of the Blue Catfish population is comprised of opportunistic generalists that feed on a diverse array of plant and animal material. We experimentally demonstrated that Blue Catfish tend to feed on whatever species are locally abundant. The most common prey were other species considered invasive in Chesapeake Bay; primarily Asian clams and Hydrilla verticillata, which is an invasive aquatic plant. Blue Catfish also eat other types of vegetation, clams, snails, crabs, fish, small invertebrates, mammals, birds, reptiles, and amphibians. Consumption of imperiled native fishes (like American Shad, American Eel, and river herring) was uncommon while consumption of the commercially-valuable blue crab was common, especially in brackish areas during the autumn. Blue Catfish consumption rates were similar to a closely related species, the channel catfish, and blue catfish can consume an estimated 2 – 5% of their body weight per day during the summer months, and up to 10% of their body weight per day during times of peak feeding. While consumption of imperiled species is rare, Blue Catfish could still have negative impacts on these species due to dense catfish populations

Thesis (MScConEcol (Conservation Ecology and Entomology))--University of Stellenbosch, 2011. / ENGLISH ABSTRACT: I evaluated the impact of Prosopis invasion and clearing on ecological structure, function and agricultural productivity in heavily grazed Nama Karoo rangeland on two sheep farms near the town of Beaufort West in the Western Cape Province of South Africa. My aims were to (1) determine the effects of invasion and clearing on rangeland vegetation composition, diversity (alien and indigenous species richness) and structure (alien and indigenous species cover), soil vegetation cover (plant canopy and basal cover) and agricultural productivity (grazing capacity), (2) describe the vegetation processes that underlay the invasion and clearing impacts and (3) evaluate the success of clearing in facilitating unaided restoration of ecological structure, function and agricultural productivity in formerly invaded rangeland. I hypothesised that invasion would significantly change rangeland vegetation composition and structure, leading to greater alien species richness and cover and lower indigenous species richness and cover while clearing would lead to lower alien species diversity and cover and greater indigenous species richness and cover. In addition I hypothesized that invasion would reduce rangeland plant canopy and basal cover and grazing capacity while clearing would substantially increase them. Finally I predicted that vegetation composition, alien and indigenous species cover and richness, plant canopy and basal cover and grazing capacity would revert to pre-invasion status and levels within four to six years of clearing. My results suggest that in heavily grazed Nama Karoo rangeland Prosopis invasion (~15 percent canopy cover) and clearing can significantly change rangeland vegetation composition, with invasion leading to greater alien species cover and lower indigenous species richness, while clearing leads to lower alien species richness and cover and greater indigenous species richness and cover. However invasion seems to have no effect on alien species richness and overall indigenous species cover. Clearing appears to facilitate the spontaneous restoration of alien species cover and indigenous species richness within four to six years but not species composition, alien species richness and indigenous species cover. In addition my results also indicate that Prosopis invasion can lower rangeland plant canopy and basal cover and grazing capacity while clearing, even under heavy grazing, can substantially raise them. Clearing however does not seem to facilitate the restoration of rangeland plant canopy and basal cover and grazing capacity to pre-invasion levels within four to six years after clearing. / AFRIKAANSE OPSOMMING: Ek het die impak van Prosopis indringing en verwydering van indringers op ekologiese struktuur, funksie en landbou produktiwiteit in ‘n swaar beweide Nama Karoo gebied op twee skaapplase naby Beaufort-Wes in die Wes-Kaap provinsie van Suid-Afrika geëvalueer. My doelwitte was om (1) te bepaal wat die gevolge van die indringing en verwydering van indringers op die natuurlike plantegroei samestelling, diversiteit (uitheemse en inheemse spesiesrykheid) en struktuur (uitheemse en inheemse spesies bedekking) sal wees, sowel as die effek op plantegroei bedekking (kroon en basalebedekking) en landbou produktiwiteit (weidingkapasiteit), (2) die plantegroei prosesse te beskryf wat onderliggend deur die impakte van indringing en verwydering van indringers veroorsaak word, en (3) die sukses van die verwydering van indringers te evalueer deur die fasilitering van blote restorasie van ekologiese struktuur en funksie en landbou produktiwiteit in voorheen ingedringde gebiede. My hipotese is dat indringing ‘n aansienlike verandering in natuurlike plantegroeisamestelling en struktuur sal veroorsaak, wat sal lei tot groter uitheemse spesiesrykheid en bedekking met minder inheemse spesiesrykheid en bedekking, terwyl die verwydering van indringers sou lei tot minder uitheemse spesie diversiteit en bedekking met 'n groter inheemse spesiesrykheid en bedekking. Verder vermoed ek dat indringing die natuurlike kroon- en basalebedekking en weidingkapasiteit sal verminder, terwyl die verwydering van indringers dit aansienlik sal verhoog. Ten slotte voorspel ek dat plantegroei samestelling, uitheemse en inheemse spesiesbedekking en -rykheid, kroon- en basalebedekking en weidingkapasiteit sou terugkeer na voor-indringing status en vlakke binne vier tot ses jaar na die verwydering van indringers. My resultate daarop dat die indringing van Prosopis (~ 15 persent kroonbedekking) en die verwydering van indringers in swaar beweide Nama Karoo gebiede ‘n aansienlike verandering in die gebied se natuurlike plantegroei samestelling toon, waar indringing gelei het tot groter uitheemse spesiesbedekking en minder inheemse spesiesrykheid, terwyl die verwydering van indringers lei tot minder uitheemse spesiesrykheid en groter inheemse spesiesrykheid en - bedekking. Dit lyk egter of indringing geen effek op uitheemse spesiesrykheid en algehele inheemse spesiesbedekking het nie. Die verwydering van indringers blyk om die spontane herstel van indringerbedekking en inheemse spesiesrykheid binne vier tot ses jaar te fasiliteer, maar nie spesiesamestelling, uitheemse spesiesrykheid of inheemse spesiesbedekking nie. Benewens dui my resultate ook aan dat Prosopis indringing die natuurlike kroon- en basalebedekking sowel as weidingskapasiteit verlaag, terwyl die verwydering van indringers, selfs onder swaar beweiding, die bedekking aansienlik kan verhoog. Verwydering van indringers lyk egter nie asof dit die herstel van die gebied se natuurlike kroon- en basalebedekking en weidingkapasiteit na voor-indringing vlakke toe kan fasiliteer binne vier tot ses jaar na die verwydering van indringers nie.

Mémoire numérisé par la Division de la gestion de documents et des archives de l'Université de Montréal.

Un modèle de croissance et de réponse à la radiothérapie pour le glioblastome multiforme (GBM) basé le formalisme du modèle de prolifération-invasion (PI) et du modèle linéaire-quadratique a été développé et implémenté. La géométrie spécifique au patient est considérée en modélisant, d'une part, les voies d'invasion possibles des GBM avec l'imagerie du tenseur de diffusion (DTI) et, d'autre part, les barrières à la propagation à partir des images anatomiques disponibles. La distribution de dose réelle reçue par un patient donné est appliquée telle quelle dans les simulations, en respectant l'horaire de traitement. Les paramètres libres du modèle (taux de prolifération, coefficient de diffusion, paramètres radiobiologiques) sont choisis aléatoirement à partir de distributions de valeurs plausibles. Un total de 400 ensembles de valeurs pour les paramètres libres sont ainsi choisis pour tous les patients, et une simulation de la croissance et de la réponse au traitement est effectuée pour chaque patient et chaque ensemble de paramètres. Un critère de récidive est appliqué sur les résultats de chaque simulation pour identifier un lieu probable de récidive (SPR). La superposition de tous les SPR obtenus pour un patient donné permet de définir la probabilité d'occurrence (OP). Il est démontré qu'il existe des valeurs de OP élevées pour tous les patients, impliquant que les résultats du modèle PI ne sont pas très sensibles aux valeurs des paramètres utilisés. Il est également démontré comment le formalisme développé dans cet ouvrage pourrait permettre de définir un volume cible personnalisé pour les traitements de radiothérapie du GBM. / We have developed and implemented a model of growth and response to radiotherapy for glioblastoma multiforme (GBM) based on the proliferation-invasion (PI) formalism and linear-quadratic model. We take into account patient-specific geometry to model the possible invasion pathways of GBM with diffusion tensor imaging (DTI) and the barriers to dispersal from anatomical images available. The actual dose distribution received by a given patient is applied as such in the simulation, respecting the treatment schedule. The free parameters in the model (proliferation rate, diffusion coefficient, radiobiological parameters) are randomly chosen from a distribution of plausible values. A total of 400 sets of values for the free parameters are thus chosen for all patients, and a simulation of the growth and the response to treatment is performed for each patient and each set of parameters. A failure criterion is applied to the results of each simulation to identify a site of potential recurrence (SPR). The superposition of all SPR obtained for a given patient defines the occurrence probability (OP). We show that high OP values exist for all patients and conclude that the PI model results are not very sensitive to the values of the parameters used. Finally, we show how the formalism developed in this work could help to define a custom target volume for radiation treatment of GBM.