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Déterminants moléculaires du clivage protéolytique nécessaire à la fonction de la sous-unité CaVα2δ1 du canal calcique CaV1.2Segura, Emilie 08 1900 (has links)
Le canal calcique de type-L CaV1.2 participe au couplage excitation-contraction des cardiomyocytes. Cav1.2 est composé d’une sous-unité principale CaVα1, associée aux sous-unités auxiliaires CaVβ et CaVα2δ1. Lorsque présente à la membrane, c’est CaVα2δ1 qui est responsable de moduler la densité du courant calcique. Elle ne possède qu’un seul segment transmembranaire présent du côté C-terminal, au niveau de la protéine δ, ce qui en fait une protéine transmembranaire de type I. Certaines protéines qui appartiennent à cette famille doivent être clivées au niveau du site dit « omega », une modification post-traductionnelle nécessaire à leur fonction. Une fois clivées, ces protéines sont retenues à la membrane plasmique par une ancre glycosyl-phosphatidyl-inositol (GPI). Nos études en microscopie confocale montrent que la protéine sauvage est sensible à l’action de la phospholipase C qui clive de manière spécifique les groupements phosphoinositol, ce qui est compatible avec la présence d’une ancre GPI fonctionnelle. De plus, la mutation des résidus formant le site « omega » en isoleucine au niveau des sites G1060 et G1061 prévient l’adressage membranaire de CaVα2δ1 estimé par cytométrie en flux et imagerie confocale, et réduit la modulation des courants calciques mesurés par la méthode du « patch-clamp ». Les mutants G1060I et G1061I sont aussi associés à un changement dans le patron de migration de la partie C-terminale, suggérant un processus protéolytique défecteueux. Les mutations simples des glycines en alanines préservent les propriétés de la protéine mais le double mutant G1060A/G1061A réduit significativement l’expression de CaVα2δ1 à la surface de la cellule et sa modulation sur le canal CaV1.2. Ces données suggèrent fortement que le clivage requiert spécifiquement un résidu Glycine en position 1060 ou 1061 pour produire le clivage protéolytique dominant chez CaVα2δ1, et que cet ancrage GPI est essentiel à la fonction du canal. / Voltage-gated calcium channels CaV1.2 play an essential role in the regulation of cardiac excitability. Functional channels are formed by the CaVα1 subunit and the intracellular CaVβ and the extracellular CaVα2δ1 subunits. CaVα2δ1 are type I transmembrane proteins that undergo a posttranslational modification producing their association at the plasma membrane through a glycosylphosphatidylinositol (GPI) anchor. The molecular determinants required for the proteolytic cleavage of the recombinant CaVα2δ1 protein were studied using biochemical, immunocytochemical, fluorescence, and electrophysiological methods. Enzymatic treatment with a phospholipase C specific for the cleavage of phosphatidyl inositol lipids abolished the colocalisation of CaVα2δ1 with a plasma membrane marker as shown using live-cell confocal imaging. Single point mutations G1060I or G1061I in the predicted transmembrane CaVδ domain was shown to significantly reduce the cell surface fluorescence of CaVα2δ1 as characterized by two-color flow cytometry assays and confocal imaging, and to prevent the CaVα2δ1-mediated increase in the peak current density and voltage-dependent gating of CaV1.2 currents. The isoleucine mutations were also associated with a change in the migration pattern of the C-terminal fragments suggesting that proteolytic processing was altered. Single glycine to alanine mutations preserved the protein properties but the double mutant G1060A/G1061A significantly impaired cell surface expression of CaVα2δ1 and its functional regulation of CaV1.2. Altogether our data support a model where one Glycine residue at position 1060 or 1061 is required to produce the dominant proteolytic cleavage of CaVα2δ1 and further suggest that the GPI-anchored form of CaVα2δ1 is essential for channel function.
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Modifications post-traductionnelles des canaux calciques cardiaques de type L : identification des résidus asparagine qui participent à la glycosylation de la sous-unité auxiliaire CaVα2δ1Tétreault, Marie-Philippe 12 1900 (has links)
Les canaux calciques de type L CaV1.2 sont principalement responsables de l’entrée des ions calcium pendant la phase plateau du potentiel d’action des cardiomyocytes ventriculaires. Cet influx calcique est requis pour initier la contraction du muscle cardiaque. Le canal CaV1.2 est un complexe oligomérique qui est composé de la sous-unité principale CaVα1 et des sous-unités auxiliaires CaVβ et CaVα2δ1. CaVβ joue un rôle déterminant dans l’adressage membranaire de la sous-unité CaVα1. CaVα2δ1 stabilise l’état ouvert du canal mais le mécanisme moléculaire responsable de cette modulation n’a pas été encore identifié. Nous avons récemment montré que cette modulation requiert une expression membranaire significative de CaVα2δ1 (Bourdin et al. 2015). CaVα2δ1 est une glycoprotéine qui possède 16 sites potentiels de glycosylation de type N. Nous avons donc évalué le rôle de la glycosylation de type-N dans l’adressage membranaire et la stabilité de CaVα2δ1. Nous avons d’abord confirmé que la protéine CaVα2δ1 recombinante, telle la protéine endogène, est significativement glycosylée puisque le traitement à la PNGase F se traduit par une diminution de 50 kDa de sa masse moléculaire, ce qui est compatible avec la présence de 16 sites Asn. Il s’est avéré par ailleurs que la mutation simultanée de 6/16 sites (6xNQ) est suffisante pour 1) réduire significativement la densité de surface de! CaVα2δ1 telle que mesurée par cytométrie en flux et par imagerie confocale 2) accélérer les cinétiques de dégradation telle qu’estimée après arrêt de la synthèse protéique et 3) diminuer la modulation fonctionnelle des courants générés par CaV1.2 telle qu’évaluée par la méthode du « patch-clamp ». Les effets les plus importants ont toutefois été obtenus avec les mutants N663Q, et les doubles mutants N348Q/N468Q, N348Q/N812Q, N468Q/N812Q. Ensemble, ces résultats montrent que Asn663 et à un moindre degré Asn348, Asn468 et Asn812 contribuent à la biogenèse et la stabilité de CaVα2δ1 et confirment que la glycosylation de type N de CaVα2δ1 est nécessaire à la fonction du canal calcique cardiaque de type L. / L-type CaV1.2 channels play a key role in the excitation-contraction coupling in the heart. They are formed of a pore-forming CaVα1 subunit in complex with the intracellular CaVβ and the disulfur-linked CaVα2δ accessory subunits. CaVα2δ significantly increases peak current densities of CaV1.2. The mechanism underlying this effect is still under study but requires that CaVα2δ be trafficked at the cell surface. CaVα2δ contains 16 putative N-glycosylation sites. A study was carried out to identify the role of N-glycosylation in the trafficking and protein stability of the subunit CaVα2δ. Herein we show that enzymatic removal of N-glycans produced a 50 kDa shift in the mobility of cardiac and recombinant CaVα2δ1 proteins. Simultaneous mutation of the 16 Asn sites was required to fully account for this change in protein mobility. Nonetheless, the mutation of only 6/16 sites was sufficient to 1) significantly reduce the steady-state cell surface fluorescence of CaVα2δ1 as characterized by two-color flow cytometry assays and confocal imaging; 2) accelerate the degradation kinetics estimated from cycloheximide chase assays; and 3) prevent the CaVα2δ1-mediated increase in peak current density and voltage-dependent gating of CaV1.2. Reversing the N348Q and N812Q mutations in the non-operational 6 Asn mutant functionally rescued CaVα2δ1. Single mutation N663Q and double mutations N348Q/ N468Q, N348Q/ N812Q, N468Q/N812Q decreased protein stability/synthesis and abolished steady-state cell surface density as well as upregulation of L-type currents. These results demonstrate that Asn663, and to a lesser extent Asn348, Asn468, and Asn812 contribute to the stability of CaVα2δ1 function and furthermore that N- glycosylation of CaVα2δ1 is essential to produce functional L-type Ca2+ channels.
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Rôle des protéoglycanes à héparane sulfate dans le transfert de gène des cellules CHO et HEK293Delafosse, Laurence 05 1900 (has links)
La possibilité de programmer une cellule dans le but de produire une protéine d’intérêt est apparue au début des années 1970 avec l’essor du génie génétique. Environ dix années plus tard, l’insuline issue de la plateforme de production microbienne Escherichia coli, fut la première protéine recombinante (r-protéine) humaine commercialisée. Les défis associés à la production de r-protéines plus complexes et glycosylées ont amené l’industrie biopharmaceutique à développer des systèmes d’expression en cellules de mammifères. Ces derniers permettent d’obtenir des protéines humaines correctement repliées et de ce fait, biologiquement actives. Afin de transférer le gène d’intérêt dans les cellules de mammifères, le polyéthylènimine (PEI) est certainement un des vecteurs synthétiques le plus utilisé en raison de son efficacité, mais aussi sa simplicité d’élaboration, son faible coût et sa stabilité en solution qui facilite son utilisation. Il est donc largement employé dans le contexte de la production de r-protéines à grande échelle et fait l’objet d’intenses recherches dans le domaine de la thérapie génique non virale. Le PEI est capable de condenser efficacement l’ADN plasmidique (vecteur d’expression contenant le gène d’intérêt) pour former des complexes de petites tailles appelés polyplexes. Ces derniers doivent contourner plusieurs étapes limitantes afin de délivrer le gène d’intérêt au noyau de la cellule hôte. Dans les conditions optimales du transfert de gène par le PEI, les polyplexes arborent une charge positive nette interagissant de manière électrostatique avec les protéoglycanes à héparane sulfate (HSPG) qui décorent la surface cellulaire. On observe deux familles d’HSPG exprimés en abondance à la surface des cellules de mammifères : les syndécanes (4 membres, SDC1-4) et les glypicanes (6 membres, GPC1-6). Si l’implication des HSPG dans l’attachement cellulaire des polyplexes est aujourd’hui largement acceptée, leur rôle individuel vis-à-vis de cet attachement et des étapes subséquentes du transfert de gène reste à confirmer.
Après avoir optimisées les conditions de transfection des cellules de mammifères CHO et HEK293 dans le but de produire des r-protéines secrétées, nous avons entrepris des cinétiques de capture, d’internalisation des polyplexes et aussi d’expression du transgène afin de mieux comprendre le processus de transfert de gène. Nous avons pu observer des différences au niveau de ces paramètres de transfection dépendamment du système d’expression et des caractéristiques structurelles du PEI utilisé. Ces résultats présentés sous forme d’articles scientifiques constituent une base solide de l’enchaînement dans le temps des évènements essentiels à une transfection efficace des cellules CHO et HEK293 par le PEI.
Chaque type cellulaire possède un profil d’expression des HSPG qui lui est propre, ces derniers étant plus ou moins permissifs au transfert de gène. En effet, une étude menée dans notre laboratoire montre que les SDC1 et SDC2 ont des rôles opposés vis-à-vis du transfert de gène. Alors que tous deux sont capables de lier les polyplexes, l’expression de SDC1 permet leur internalisation contrairement à l’expression de SDC2 qui l’inhibe. De plus, lorsque le SDC1 est exprimé à la surface des cellules HEK293, l’efficacité de transfection est augmentée de douze pourcents. En utilisant la capacité de SDC1 à induire l’internalisation des polyplexes, nous avons étudié le trafic intracellulaire des complexes SDC1 / polyplexes dans les cellules HEK293. De plus, nos observations suggèrent une nouvelle voie par laquelle les polyplexes pourraient atteindre efficacement le noyau cellulaire.
Dans le contexte du transfert de gène, les HSPG sont essentiellement étudiés dans leur globalité. S’il est vrai que le rôle des syndécanes dans ce contexte est le sujet de quelques études, celui des glypicanes est inexploré. Grâce à une série de traitements chimiques et enzymatiques visant une approche « perte de fonction », l’importance de la sulfatation comme modification post-traductionnelle, l’effet des chaînes d’héparanes sulfates mais aussi des glypicanes sur l’attachement, l’internalisation des polyplexes, et l’expression du transgène ont été étudiés dans les cellules CHO et HEK293.
L’ensemble de nos observations indique clairement que le rôle des HSPG dans le transfert de gène devrait être investigué individuellement plutôt que collectivement. En effet, le rôle spécifique de chaque membre des HSPG sur la capture des polyplexes et leur permissivité à l’expression génique demeure encore inconnu. En exprimant de manière transitoire chaque membre des syndécanes et glypicanes à la surface des cellules CHO, nous avons déterminé leur effet inhibiteur ou activateur sur la capture des polyplexes sans pouvoir conclure quant à l’effet de cette surexpression sur l’efficacité de transfection. Par contre, lorsqu’ils sont présents dans le milieu de culture, le domaine extracellulaire des HSPG réduit l’efficacité de transfection des cellules CHO sans induire la dissociation des polyplexes. Curieusement, lorsque chaque HSPG est exprimé de manière stable dans les cellules CHO, seulement une légère modulation de l’expression du transgène a pu être observée.
Ces travaux ont contribué à la compréhension des mécanismes d'action du vecteur polycationique polyéthylènimine et à préciser le rôle des protéoglycanes à héparane sulfate dans le transfert de gène des cellules CHO et HEK293. / With the aim to express a protein of interest, the transfer of exogenous genetic material into host cells was established in early 70s with the development of genetic engineering. Approximately ten years later, insulin was the first human recombinant protein (r-protein) produced at large scale in Escherichia coli and commercialized. Challenges associated with the production of more complex and glycosylated r-proteins brought the pharmaceutical industry to develop mammalian expression platforms. Thus, the expressed r-proteins are correctly folded and biologically actives. As a means to transfer genetic materials of interest into mammalian cells, the synthetic vector polyethylenimine (PEI) is probably the most popular due to its efficacy, ease of use, cost-effectiveness and stability in solution. Consequently, PEI is largely employed for the production of r-proteins by large scale and extensively studied in the context of non-viral gene therapy. PEI is capable to efficiently condense plasmid DNA (expression vector containing the gene of interest) to form small nanoparticles termed polyplexes. The latter must circumvent several steps to deliver the gene of interest to the cell nucleus. When formed at the optimum conditions, polyplexes exhibit a net positive charge which can interact electrostatically with negatively charged heparan sulfate proteoglycans (HSPG) located at the cell surface. There are two major families of HSPG that are largely expressed at the surface of mammalian cells: the syndecans (4 members, SDC1-4) and the glypicans (6 members, GPC1-6). Although it is generally accepted that HSPG are involved in the binding of polyplexes, their individual role toward polyplex binding and the subsequent phases of gene transfer need to be confirmed.
Following optimization of the mammalian CHO and HEK293 cells transfection conditions, we undertook an in-depth study of polyplexes uptake, internalization kinetics, as well as transgene expression kinetics with the aim to better understand the mechanisms underlying gene transfer. We observed several contrasting differences between the two cell lines and the type of PEI used. Our results presented as a scientific article, establish strong basis of the gene transfer process over-time.
Every cell type possesses its own expression profile of HSPG which can display individual potency toward gene transfer. Indeed, a preliminary study conducted in our laboratory showed that SDC1 and SDC2 have distinct features with regard to gene transfer. While both are capable to bind polyplexes at the cell surface, the expression of SDC1 enhances polyplexes internalization whereas the expression of SDC2 drastically inhibits it. Furthermore, when SDC1 is expressed at the surface of HEK293 cells, the transfection efficiency is increased by twelve percent compared to control cells. By using the ability of SDC1 to mediate efficient internalization of polyplexes, we have studied the intracellular traffic of SDC1 / polyplexes complexes. Our conclusions lead to new insights concerning the path by which polyplexes can mediate efficient transfection.
In the context of gene transfer, HSPG have been essentially studied in their entirety. Although the role of syndecans is the subject of some studies, that of glypicans is unexplored. Thanks to a series of chemical and enzymatic treatments leading to « loss of functions », the importance of sulfation as post-translational modification, the effect of HS chains and of glypicans on the attachment, internalization of polyplexes as well as transgene expression were investigated in CHO and HEK293 cells.
Taken together, our observations indicate clearly that the role of HSPG should be investigated individually instead of collectively. Consequently, the individual potency of each HSPG member regarding gene transfer remains to be defined. We demonstrated that, in fact, the transient expression of some HSPG in CHO cells have a beneficial effect on polyplexes uptake while others have a negative effect. Unfortunately, this method did not allow concluding about their effect on transfection efficacy. However, when present in the culture medium, the extracellular domain of HSPG decreases transfection efficacy of CHO cells without inducing polyplexes dissociation. Strangely, when each HSPG is stably expressed in CHO cells, only subtle modulations of the gene expression level were observed.
This study contributed to a better understanding of the mechanisms underlying PEI mediated gene transfer in CHO and HEK293 cells and clarify the role of HSPG in gene transfer.
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Modulation de l’activité du flavocytochrome b₅₅₈ : étude fonctionnelle / Modulating the activity of flavocytochrome b₅₅₈ : functional studySouabni, Hager 06 March 2014 (has links)
Le complexe NADPH oxydase est un élément essentiel de l’immunité inné. Présent dans les cellules phagocytaires (neutrophile), sa fonction est de produire massivement, dans le phagosome, des anions superoxyde et générer ainsi des espèces encore plus réactives de l’oxygène qui vont détruire acides nucléiques, lipides et protéines des bactéries phagocytées. Le cœur membranaire catalytique du complexe NADPH oxydase est constitué d’un hétérodimère membranaire, le cytochrome b₅₅₈ (Cyt b₅₅₈). Après activation de celui-ci par les partenaires protéiques cytosoliques p47phox, p67phox, p40phox et Rac, une succession de réactions de transferts d’électron de part et d’autre de la membrane a lieu au sein du Cyt b₅₅₈ pour aboutir à la réduction du dioxygène de manière très contrôlée. Afin de mieux comprendre cette régulation, nous nous sommes d’abord intéressés aux stéreoisomères trans de l’acide arachidonique, activateur naturel de cet enzyme (cis), sur le fonctionnement de la NADPH oxydase et avons abordé cette étude parallèlement sur du Cytb₅₅₈ d’origine bovine présent dans des membranes de neutrophiles et dans des membranes de levures exprimant le Cytb₅₅₈ de manière hétérologue. Nous avons montré que la géométrie joue un rôle important sur l’activation du complexe enzymatique. Dans un deuxième temps, afin d’étudier le rôle de l’environnement membranaire sur le fonctionnement de la NADPH oxydase, nous avons déterminé les propriétés cinétiques et thermodynamiques de l’activité NADPH oxydase du Cytb₅₅₈ recombinant exprimé en levures, purifié, puis reconstitué en liposomes de composition lipidique variée. Après comparaison avec ces mêmes propriétés obtenues pour le Cytb₅₅₈ dans les membranes plasmiques et du réticulum endoplasmique de levures, nous avons montré que l’activité NADPH oxydase très sensible à la température peut être modulée par la composition et l’état physique de la membrane. / NADPH oxidase complex is a major actor of both antimicrobial host defense and inflammation by generating highly regulated superoxide anion, rapidly converted into reactive oxygen species (ROS). The NADPH oxidase complex consists of a heterodimeric integral membrane flavocytochrome b₅₅₈ and three cytosolic components p67phox, p47phox and p40phox, and the small GTP binding protein Rac. In response to a cellular stimulus, cytosolic proteins are recruited to the phagosomal membrane where they are assembled with the Cytb₅₅₈ to form the active NADPH oxidase. The aim of the work was to better understand the modulation of superoxide anion production by this enzyme. For this purpose, we performed experiments with both bovine neutrophil membranes and yeast membranes expressing the bovine recombinant Cytb₅₅₈. We first investigated the effect of the trans-isomerization of the cis-arachidonic acid, the activator of NADPH oxidase in vitro and showed that specific geometry of the activator plays an important role in the activation of the complex. We also studied the role of the membrane environment on the functioning of NADPH oxidase and determined the kinetics and thermodynamics of NADPH oxidase activity depending on the lipid composition of Cytb₅₅₈ proteoliposomes. Comparison with these properties obtained with recombinant Cytb₅₅₈ embedded into endoplasmic reticulum and plasma membranes, we showed that the NADPH oxidase activity is highly temperature dependent and can be modulated by the lipid environment and the physic state of the membrane.
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Avaliação do potencial de crescimento e produção de proteínas recombinantes de células humanas adaptadas para crescimento em suspensão e meios de cultura livres de soro fetal bovino / Evaluation of growth and recombinant protein production of human cell lines adapted to serum-free suspension culturesBiaggio, Rafael Tagé 29 October 2018 (has links)
Linhagens celulares humanas tem despertado interesse como plataformas de produção de proteínas terapêuticas recombinantes por sua capacidade de realizar modificações pós-traducionais complexas e de modo similar à humana, sem gerar epítopos imunogênicos como ocorre com proteínas produzidas em células de mamíferos. Para a produção de uma proteína com correta qualidade terapêutica, as agências regulatórias recomendam processos livres de componentes animais de modo a evitar contaminação com vírus e príons. Deste modo, esse trabalho visa a produção do fator VII da coagulação sanguínea recombinante (FVIIr) utilizada no tratamento de hemofílicos com inibidores em células humanas adaptadas para meios de cultura livres de soro fetal bovino. As linhagens humanas SK-Hep-1, HKB-11 e Huh-7 foram adaptadas para suspensão e meios livres de soro fetal bovino (SFB). Essas células adaptadas foram transfectadas de forma transiente com o vetor lentiviral p1054-GFP e o reagente polietilenimina. No entanto, a baixa eficiência de transfecção nas células SK-Hep-1 e Huh-7 mostraram que essas linhagens são difíceis de transfectar por esse método, e mesmo a transfecção da célula HKB-11 só foi possível após a variação de alguns parâmetros, resultando em uma transfecção de 49,5% de células HKB-11 GFP-positivas. Desta forma, a expressão estável foi avaliada e as células adaptadas foram transduzidas com um ciclo de lentivírus (MOI = 1) contendo o vetor p1054-FVII. Foram observadas porcentagens de células GFP-positivas acima de 35% nas três linhagens celulares humanas modificadas. As células transduzidas foram submetidas a dois processos de sorting por citometria de fluxo, no qual a população obtida apresentava mais de 90% de células GFP-positivas. As três células foram avaliadas com relação à expressão de FVIIr após a adição de vitamina K no cultivo, no entanto, não foi possível detectar níveis de FVIIr no sobrenadante de 48 horas do cultivo dessas células pelo teste ELISA. As células foram transduzidas com um segundo ciclo de lentivírus (MOI = 2). A quantificação por ELISA do sobrenadante de 48 horas de cultivo das três células detectou 240,96 ng/mL, 217,42 ng/mL e 78,46 ng/mL de FVII total, respectivamente, nos cultivos das células HKB-11-F7-2C, SK-Hep-1-F7-2C e Huh-7-F7-2C. A expressão relativa de RNA mensageiro por RT-PCR também foi observada nos três cultivos. Paralelamente, foi analisado o proteoma das três células adaptadas e não-adaptadas em triplicata sendo identificadas de forma abundante proteínas do citoesqueleto, do metabolismo celular, da síntese, enovelamento e degradação de proteínas, relacionadas à apoptose, ao ciclo celular e ao crescimento, proteínas contra estresse oxidativo e osmótico, com ação antioxidante, entre outras. / Human cell lines have attracted great interest as a plarform for recombinant therapeutic proteins production, due their ability to perform complex posttranslational modification in a similar manner to human proteins. These proteins do not carry immunogenic epitopes as occurs with proteins produced in mammalian cells. These therapeutic proteins should be produced in a animal-free process avoiding virus and prion contamination, as recommended by regulatory agencies for quality control. Thus, this work aims the production of recombinant blood coagulation factor VII (rFVII) used in the treatment of hemophiliacs with inhibitors in human cell lines adapted to serum-free suspension cultures. Human cell lines SK-Hep-1, HKB-11 and Huh-7 were adapted to suspension and serum-free media. These adapted cells were transiently transfected with p1054-GFP lentiviral vector and the polyethyleneimine reagent. However, low transfection efficiency in SK-Hep-1 and Huh-7 cells showed that these cells are difficult to transfect by this method, and even transfection of HKB-11 cell was only possible after varying some parameters, resulting in a 49,5% HKB-11 GFP-positive cells. Stable transfection was assessed and adapted cells were transduced with lentivirus particles containing p1054-FVII vector in one cycle (MOI=1). Percentages of GFP-positive cells above 35% were observed in three modified human cell lines. Transduced cells were sorted by FACS and more than 90% of GFP-positive cells were obtained. The expression of rFVII were evaluated by ELISA test after vitamin K supplementation, however, it was not possible to detect FVII levels in the 48 hour culture supernatant. Cells were transduced again with a second lentivirus cycle (MOI = 2). ELISA quantification of the 48 hour culture supernatant detected 240,96 ng/mL, 217,42 ng/mL and 78,46 ng/mL total FVII, respectively, in the cultures of HKB-11-F7-2C, SK-Hep-1-F7-2C and Huh-7-F7-2C cells. Relative expression of mRNA by RT-PCR was also observed in the three cultures assessed. In parallel, a proteomic analysis of adapted and non-adapted cells was performed in triplicate. Proteins related to cellular metabolism, cytoskeletal structure, apoptosis, cell cycle and cell growth, against oxidative and osmotic stress, antioxidant action were found.
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Contrução do fago recombinante D29::gfp com potencial de aplicação nos testes de sensibilidade pela concentração inibitória mínima para o Mycobacterium spp. / Construction of the recombinant phage D29::gfp with application potential in sensitivity tests by the minimum inhibitory concentration for Mycobacterium spp.Carbone, Paulo Henrique Lage 29 June 2007 (has links)
O objetivo desse trabalho foi construir o fago recombinante D29::gfp e testar a sua utilização como um agente revelador da viabilidade bacilar na determinação da concentração inibitória mínima (GIM) aos principais fármacos administrados no tratamento da tuberculose. O fago recombinante contém o promotor hsp70 e o gene da proteína verde fluorescente (gfp) e foi construído através da restrição pela Spe I em uma região intergênica próxima a extremidade coesiva direita no genoma do fago D29. O promotor hsp70 e gfp clonados no pYL GFP foram amplificados pela PCR utilizando iniciadores com sítios para Spe I. O DNA do fago D29 digerido pela Spe I foi ligado com o fragmento hsp 70- gfp empregando a T 4 DNA ligase e os produtos da reação de ligação foram transformados de acordo com o protocolo de encapsulamento. A infecção do M.smegmatis com esse fago recombinante induziu a expressão da proteína verde fluorescente (GFP). Para avaliar o uso do fago recombinante em teste de sensibilidade aos fármacos anti-tuberculose, 100 isolados clínicos foram testados quanto ao perfil de sensibilidade a isoniazida (H), rifampicina (R), estreptomicina (S) e etambutol (E), utilizando o método das proporções em Lowenstein-Jensen (L-J), técnica em microplaca com a resazurina (REMA) e técnica em microplaca com D29::gfp. Os resultados do REMA demonstraram que 30 isolados clínicos foram sensíveis à H e 58 (66 %) isolados clínicos foram resistentes, dentre os quais a CIM foi 1 µg/mL ou maior para 41 (71 %). A CIM da R para 49 (56%) dos isolados clínicos resistentes foi de 0,5 µg/mL para 17 (35%). A CIM da S para 33 (37%) dos isolados clínicos resistentes foi de 2 µg/mL para 13 (40%) e CIM do E para 34 (39%) dos isolados clínicos resistentes foi de 16 µg/mL ou maior para 19 (56%). A caracterização molecular pela PCR IS6110 identificou 88 isolados clínicos como M.tuberculosis e pelo PRA hsp65, sete isolados clínicos foram M.kansasii, quatro foram M.abscessus e um M.szulgai. Após empregar o fago recombinante como um agente indicador da viabilidade bacilar para testar a atividade dos fármacos anti-tuberculose conclui-se que a expressão da proteína verde fluorescente foi inespecífica e não reprodutiva, não justificando o seu uso para determinar a CIM para os principais fármacos administrados no tratamento da tuberculose. / The objective of this work was to construct the recombinant phage D29::gfp and to use this phage as an indicator agent of cell viability in a minimal inhibitory concentration (MIC) assay for the mains drugs used for tuberculosis treatment. The recombinant phage contains the mycobacteria-specific hsp70 promoter controlling the green fluorescent protein gene (gfp) and was constructed by Spe I restriction in the intergenic region next to the right cohesive termini of the D29 phage genome. An hsp 70 promoter and gfp previously cloned in p YL GFP was amplified by PCR using primers with Spe I sites. The Spe I-restricted D29 phage DNA was ligated with the hsp 70-gfp fragment using T4 DNA ligase and ligated product was transformed using the packing protocol. Infection of M.smegmatis with this recombinant phage indicated the expression of green f1uorescent protein (GFP). To use the recombinant phage for assaying the activity of anti-TB drugs, 100 clinical isolates was tested for susceptibility to isoniazid (H), rifampicin (R), streptomycin (S), and ethambutol (E) using both the proportion method on Lowenstein-Jensen (L-J) medium, resazurin microtiter assay plate (REMA), as well as a microplate assay using D29::gfp. The REMA plate method showed that 30 clinical isolates were susceptible to H and 58 (66%) clinical isolates were resistant, where the MICs were 1 µg/mL or higher for 41 (71%). The R MICs for 49 (56%) resistant clinical isolates were 0,5 µg/mL for 17 (35%). The S MICs for 33 (37%) resistant clinical isolates were 2 µg/mL for 13 (40%) and E MICs for 34 (39%) resistant clinical isolates were 16 µg/mL or higher for 19 (56%). Molecular characterization by PCR IS6110 showed that 88 clinical isolates were M.tuberculosis and by PRA hsp65 were seven clinical isolates were M.kansasii and four was M.abscessus, and one M.zulgai. After using the recombinant phage as an indicator agent of cell viability for assaying the activitity of anti-TB drugs we can conclude that the expression of green fluorescent protein was non-specific and not reproducible, rendering it not useful for the determination of the MIC of the principal drugs used for the treatment of tb.
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Construção e análise funcional de vetores lentivirais de interesse biotecnológico / Construction and functional analysis of lentiviral vectors for biotechnological purposesVedoveli, Naiara Cristina Pulzi Saito 16 May 2016 (has links)
Vetores lentivirais são ferramentas fundamentais para modificação celular. Sua utilização ganhou destaque devido à capacidade desses em integrar ao genoma de células que estão ou não em divisão. Grande parte dos vetores desenvolvidos são derivados do genoma do Vírus da Imunodeficiência Humana (HIV-1), portanto, modificações foram necessárias a fim de evitar a formação de Partículas Competentes em Replicação (RCLs) e garantir uma utilização segura. Com as modificações, foram produzidos os vetores lentivirais de terceira geração utilizados atualmente. Esses vetores podem ser usados para expressão constitutiva de genes, produção de proteínas recombinantes, produção de animais transgênicos e terapia gênica. Com isso, torna-se necessário o desenvolvimento de vetores lentivirais para aplicação em pesquisa básica e ensaios clínicos. Dessa forma, o presente estudo teve por objetivo a construção de vetores de expressão lentivirais aplicáveis à: 1- expressão constitutiva de genes de interesse e 2-vetores com promotores específicos para expressão de proteínas em megacariócitos. Esse trabalho descreve a construção desses vetores, sua importância e discute suas possíveis aplicações. As sequências selecionadas para produção dos vetores foram: os genes Runx1C e VkorC1 e os promotores proPF4 e proITGA2b. Todas as sequências encontram-se clonadas em vetor de clonagem e estoques de bactérias com esses vetores congeladas em glicerol foram confeccionados. Para a confecção dos vetores lentivirais, o gene Runx1C foi subclonado no vetor lentiviral base p1054-CIGWS sob controle do promotor forte CMV, enquanto o promotor proITGA2b foi subclonado no vetor base p1054-FVIII, em substituição ao promotor CMV, de forma a controlar a expressão de FVIII. Os dois vetores produzidos apresentam ainda o gene para proteína verde GFP precedida do sítio de ligação do ribossomo IRES, com expressão controlada pelo mesmo promotor interno do vetor. O trabalho possibilitou, portanto, a produção de dois vetores lentivirais bi-cistrônicos: p1054-Runx1C e pL-proITGA2b-FVIII. A construção p1054-Runx1C ainda não foi sequenciada, mas foi confirmada por restrição enzimática e apresenta potencial para aplicação em estudos de diferenciação hematopoética. Já a construção pL-proITGA2b-FVIII foi sequenciada, porém sem confirmação da região de ligação do proITGA2b ao vetor. Reações de PCR e de restrição enzimática confirmaram a ligação e sequenciamento mostrou 67% de similaridade entre a região sequenciada e o promotor ITGA2b depositado no banco de dados. Análise funcional foi realizada através da transfecção desse vetor em células HEK-293T. As células transfectadas apresentaram expressão positiva para GFP e secreção de FVIII no sobrenadante celular, evidenciando que o promotor proITGA2b clonado no vetor encontra-se ativo. Esse vetor apresenta potencial para aplicação em terapia gênica para hemofilias, pois apresenta expressão do fator de coagulação direcionado a megacariócitos e plaquetas, células que estão diretamente relacionadas ao processo de coagulação, representando grandes veículos para secreção desses fatores. Ainda, os dois vetores lentivirais gerados apresentam segurança e eficiência elevadas, pois são vetores de terceira geração auto-inativantes (SIN) e apresentam elementos regulatórios que melhoram o transporte e integração do DNA ao genoma hospedeiro. / Lentiviral vectors are fundamental tools for cell modification that gained prominence due to their ability to integrate the genome of non-dividing cells. Most of developed lentiviral vectors are derived from the genome of Human Immunodeficiency Virus (HIV-1), so modifications were necessary in order to avoid the formation of Competent Replication Particles (RCLs) and ensure safer operations. The modifications led to development of third generation lentiviral vectors currently used. These vectors can be used for constitutive gene expression, production of recombinant protein, production of transgenic animals and gene therapy. It\'s evident the need to develop lentiviral vectors for application in basic research and clinical trials. Thus this study aimed to construct lentiviral expression vectors applicable to: 1- constitutive expression of genes of interest and 2-vectors with specific promoters for expression of proteins in megakaryocytes and platelets. This paper describes the construction of these vectors, their importance and discuss their possible applications. Sequences were selected for production of the vectors: genes Runx1C and VkorC1 and proPF4 and proITGA2b promoters. All four sequences are cloned into cloning vectors and stocks of bacteria with these vectors frozen in glycerol were prepared. Lentiviral vectors were engineered from subcloning the sequence Runx1C into the basic lentiviral vector p1054- CIGWS under control of the strong CMV promoter, and from subcloning proITGA2b promoter into p1054-FVIII basic vector, replacing the CMV promoter in order to control the expression of FVIII. Both vectors exhibit the green fluorescence protein GFP gene preceded by a ribosome binding site IRES under control of vector\'s internal promoter. Therefore, this work resulted in the production of two bi-cistronic lentiviral vectors: p1054-Runx1C and pLproITGA2b-FVIII. The p1054-Runx1C construction has not yet been sequenced, but it was confirmed by digestion and has potential for use in hematopoietic differentiation studies. Though, pL-proITGA2b-FVIII construct was sequenced, but the technique didn\'t allow to confirm the binding region between proITGA2b and the vector. Although PCR reaction and digestion confirmed the construction. Sequence analysis showed 67% similarity between the sequenced region and ITGA2b promoter deposited in the database. Functional analysis was performed by transfection of this vector in HEK-293T cells. The transfected cells showed positive expression of GFP and FVIII secretion in cell supernatant, indicating that the proITGA2b promoter cloned into the vector is active. This vector has potential usage in gene therapy for hemophilia, since it can be used to express coagulation factors in megakaryocytes and platelets and these cells are directly related to the clotting process, representing great vehicles for secretion of these factors. Even more, the two lentiviral vectors generated have higher safety and efficiency, as they are self-inactivating (SIN) third-generation vectors and have regulatory elements that enhance transport and integration of DNA into the host genome.
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Comparação da atividade biológica e da glicosilação da gonadotrofia coriônica equina recombinante (reCGβα) expressa em duas linhagens celulares de mamíferos visando à geração de um biofármaco / Comparision of the biological activity and glicosilation of recombinant chorionic gonadotropin (reCGβα) expressed in two mammalian cell lines, aiming at generating a biopharmaceuticalCoelho, Tatiane Maldonado 24 September 2014 (has links)
Atualmente, o Brasil encontra-se na privilegiada posição de maior produtor e exportador mundial de carne bovina, tornando a pecuária uma das atividades nacionais mais importantes e rentáveis. Este dado enfatiza a importância de pesquisa e desenvolvimento em reprodução bovina, especialmente em hormônios estimuladores da ovulação, tais como a gonadotrofina coriônica equina (eCG). Os produtos comerciais à base de eCG comercialmente disponíveis são purificados a partir do sangue de éguas gestantes, apresentando variabilidade de lote para lote e presença de contaminantes. Estes fatos, juntamente com a limitação do material de partida (sangue equino), enfatizam a necessidade de haver um sistema de expressão de eCG recombinante passível de ser explorado comercialmente. Neste quesito, as células de mamíferos se mostram um sistema robusto para tal finalidade, visto que são capazes de adicionar modificações pós-traducionais às cadeias polipeptídicas, tais como a glicosilação, o que é essencial para o correto dobramento, maturação e montagem das duas subunidades, além de interferir diretamente com a meia-vida, o reconhecimento do receptor, a solubilidade e a atividade biológica das proteínas. No entanto, mesmo entre os sistemas de expressão heteróloga em células de mamífero, encontra-se muita variabilidade nos padrões de glicosilação adicionado. No presente trabalho, foi realizado um estudo comparativo através da clonagem e expressão de uma forma fusionada de eCG (reCGβα) em duas linhagens celulares diferentes: (1) CHO-DG44, um dos sistemas de expressão mais utilizados pelas indústrias farmacêuticas, capaz de adicionar N-glicanos complexos; e (2) 293T, uma linhagem humana capaz de produzir glicoproteínas carreando oligossacarídeos complexos e sialilados. Os resultados de atividade biológica (in vitro e in vivo) apontam uma maior atividade de reCG produzido por células CHO-DG44. O perfil de N-glicosilação de reCG produzido pelas células CHOD-G44 assemelhou-se mais à eCG selvagem, quando comparado a reCG produzido por células 293T. Por fim, estudos clínicos foram realizados com reCG produzido em meio livre de soro fetal bovino e parcialmente purificado, onde atividade específica de reCG produzido por células CHO-DG44 mostrou-se similar ao produto comercial selvagem. / Brazil is currently the major beef producer and exporter, rendering to livestock one of the country´s most economically relevant activities. This emphasizes the importance of research and development in bovine reproduction, especially at ovulation-stimulatory hormones, such as equine gonadotropin (eCG). The commercially available eCG-based products are purified from blood of pregnant heifers, presenting batch-to-batch variability and the presence of contaminants. These facts, together with the limitation of the bulk material (equine blood), emphasize the need of an eCG expression system able to be commercially explored. In this aspect, mammalian cells are a robust system, capable of add post-translational modifications to polypeptide chains, such as glycosylation, which is essential for the correct folding, maturation and assembly of both eCG subunits. In addition, glycosylation directly interferes with the protein half-life, receptor recognition, solubility and biological activity. In the present work, a comparative study was carried out by cloning and expressing a fusion form of eCG (reCGβα) in two different mammalian cell lines: (1) CHO-DG44, one of the most used by pharmaceutical companies expression systems, capable of add complex-type N-glycans; and (2) 293T, a human cell line capable of produce glycoproteins carrying complex and sialylated oligosaccharides. The in vitro and in vivo biological activity results show a higher potency of reCG produced by CHO-DG44 cells. The N-glycosylation pattern produced by CHO-DG44 cells was more similar to native eCG in comparison to the N-glycosylation produced by 293T cells. Finally, clinical studies were performed with serum absent media produced and partially purified reCG, showing that the specific activity of reCG produced by CHO cells was similar to the commercial wild type product.
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Modelo cinético não-estruturado para crescimento e produção de glicoproteína recombinante do vírus da raiva em linhagem S2 de células de Drosophila melanogaster. / Unstructured kinetic modelling for growth and recombinant rabies virus glycoprotein production in a S2 strain cell line of Drosophila melanogaster.Barral, Manuel Filgueira 12 November 2010 (has links)
Linhagem de células de inseto S2 foram cultivadas em meio TC100 suplementado em reator bubble free de 1.5 L e para estudar o seu crescimento e expressão da glicoproteína G do vírus da raiva (RVGP). Os dados permitiram propor um modelo matemático que reproduz o crescimento e produção da glicoproteína e que considera oito variáveis de estado e vinte parâmetros cinéticos. O modelo considera a velocidade específica de crescimento limitada por glicose, glutamina e glutamato e inibida por NH4+; consumo e formação de glutamina; velocidade específica de morte limitada por NH4+ e inibida por glicose; velocidade específica de produção de NH4+ e de GPV associada ao crescimento e a degradação de GPV. As concentrações de oxigênio dissolvido (pO2), glicose e glutamina foram modificadas para se avaliar a sua influência na velocidade específica de crescimento máxima e nos fatores de conversão. Os parâmetros do modelo foram ajustados usando a técnica de otimização dos poliedros flexíveis e as equações diferenciais do modelo foram integradas pelo método de Gear. / S2 cell strain from Drosophila melanogaster were cultivated in supplemented TC100 media in reactor \"bubble free\" to study their growth and expression of glycoprotein G of rabies virus (RVGP). The data allowed proposing a mathematical model that reproduces the growth and production of glycoprotein and that consider eight state variables and twenty kinetic parameters. The model considers the specific growth rate limited by glucose glutamine and glutamate and inhibited by NH4+ consumption and formation of glutamine, specific death rate limited by NH4+ and inhibited by glucose; production specific rate of NH4+ and RGPV associated with growth and degradation of RGPV. The concentrations of dissolved oxygen (pO2), glucose and glutamine were varied to evaluate their influence on maximum specific growth rate and conversion factors. The model parameters were adjusted using the flexible polyhedron optimization method and the differential equations of the model were integrated by the method of Gear.
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Ocorrência de anticorpos anti-hantavírus (IgG) em populações humanas na região Amazônica e no estado de São Paulo (Mata Atlântica), utilizando proteína recombinante (nucleocapsídio) do vírus Araraquara. / Detection of antibodies (IgG) against hantavirus in human population of Amazon region and the state of Sao Paulo (Atlantic Forest), using recombinant antigen of Araraquara virus.Morais, Felipe Alves 11 November 2010 (has links)
A hantavirose (infecção por Hantavírus) é uma das zoonoses que vem preocupando as autoridades sanitárias de todo o mundo. Sua ocorrência se deve principalmente os distúrbios ecológicos é transmitida ao homem através de inalação de partículas virais contida na excreta de roedores. São conhecidas duas doenças humanas distintas causadas pelo Hantavírus: a Febre Hemorrágica com Síndrome Renal (FHSR) e a Síndrome Pulmonar e Cardiovascular (SPCVH). O objetivo deste estudo foi verificar a ocorrência de anticorpos IgG anti-hantavírus, através do ELISA, em populações da Amazônia e Sudeste brasileiro, que vivem em contato com os roedores silvestres, utilizando a proteína recombinante do vírus Araraquara expressa em Escherichia coli. Do total de estudados 1308 soros humanos estudados, na Amazônia (1078) encontramos 59 soros positivos (5%). Na cidade Machadinho do OesteRO os soros coletados durante o ano 2003, foram analisados 638, onde foram encontrados 20 soros positivos (4,5%); e no Rio Machado RO. foram analisados 435 soros da população ribeirinha onde foram encontrados 39 (5%) soros positivos, respectivamente. Após análise realizada em 151 soros humanos provenientes do Vale do Ribeira, em 2007; e 84 no Pontal do Paranapanema, em 2008, foram observados 14 positivos (9%) e 6 (7%) das amostras, respectivamente. / The genus Hantavirus of the family Bunyaviridae includes a large number of rodent-borne viruses that are distributed worldwide. The occurrence is due mainly to ecological disturbances and it is transmitted to the humans through inhalation of virus particles contained in the excreta of wild rodents. Two different human diseases known to be caused by Hantavirus: are Hemorrhagic Fever with Renal Syndrome (HFRS) and Hantavirus Cardiopulmonary Syndrome (HPS). The main objective of this study was detected antibody against hanatavirus (IgG) by ELISA, in Amazon region and Brazilian Southwest populations who live in contact with the wild rodents, using recombinant protein (antigen) of the Araraquara virus expressed in Escherichia coli. We study 1308 human sera (1078 from Amazon region) and there were found 59 (5%) positive sera. From the city of Machadinho do Oeste RO (2003 year), 633 sera were analysed, where there were found to be 20 positive (4.5%) serums. In Machado river RO (2005 year), 435 sera of the river-dwelling population were analysed where there were found 39 (5%) positive sera, respectively. After analysis was accomplished for 151 human sera coming from the Vale do Ribeira - SP, in 2007, and 84 from the Pontal do Paranapanema - SP, in 2008, 14 (9%) and 6 (7%) of the samples were observed to be positive, respectively.
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